ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108613.1| Zea mays PCO091786 mRNA sequence 66 2e-07
2gb|AF457987.1| Zea mays clone cho1c.pk003.b3, mRNA sequence 54 7e-04
3gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome... 46 0.18
4gb|BT024168.1| Zea mays clone EL01N0323B09 mRNA sequence 46 0.18
5gb|AC159703.1| Trypanosoma brucei chromosome 8 clone RPCI93-30K1... 44 0.72
6gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J1... 44 0.72
7gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 44 0.72
8gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's H... 44 0.72
9gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, com... 42 2.8
10gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 42 2.8
11gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C2... 42 2.8
12gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, co... 42 2.8
13gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete se... 42 2.8
14emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in... 42 2.8
15emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 i... 42 2.8
16emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chrom... 42 2.8
17emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chr... 42 2.8
18gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2... 42 2.8
19emb|AL355805.20| Human DNA sequence from clone RP11-29L10 on chr... 42 2.8
20gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosom... 42 2.8
21emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chrom... 42 2.8
22emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in li... 42 2.8
23gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Canc... 42 2.8
24emb|BX537277.15| Zebrafish DNA sequence from clone DKEY-45D16 in... 42 2.8
25emb|BX548018.9| Zebrafish DNA sequence from clone DKEY-23O18 in ... 42 2.8
26emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, c... 42 2.8
27emb|BX005389.12| Zebrafish DNA sequence from clone DKEY-10F11 in... 42 2.8
28emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in ... 42 2.8
29gb|AE006470.1| Chlorobium tepidum TLS, complete genome 42 2.8
30gb|AC154109.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.8
31emb|BX248328.6| Zebrafish DNA sequence from clone CH211-202H10, ... 42 2.8
32emb|BX294376.10| Zebrafish DNA sequence from clone CH211-117M20 ... 42 2.8
33dbj|AB073701.1| Borrelia duttonii plasmid DNA, complete sequence... 42 2.8
34emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in ... 42 2.8
35emb|AL929250.8| Zebrafish DNA sequence from clone CH211-137A2, c... 42 2.8
36emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, c... 42 2.8
37emb|BX950189.14| Zebrafish DNA sequence from clone CH211-155P8 i... 42 2.8
38emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in... 42 2.8
39emb|AL713987.7| Zebrafish DNA sequence from clone BUSM1-145B16 i... 42 2.8
40emb|BX004978.10| Zebrafish DNA sequence from clone DKEY-15P13 in... 42 2.8
41emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.8
42emb|AL954358.5| Zebrafish DNA sequence from clone CH211-226D12, ... 42 2.8
43emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, ... 42 2.8
44emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 42 2.8 
>gb|AY108613.1| Zea mays PCO091786 mRNA sequence
          Length = 597

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 677 acacttcctctcgcaagacgccctgcttgggtgatgatgctcccggctgtggcactcgtc 736
           ||||||| |||||||| || | ||||| |||||||| ||||||||||| |||||||| ||
Sbjct: 258 acacttcatctcgcaaaactctctgctagggtgatggtgctcccggctatggcactcatc 199

                    
Query: 737 gacgcactg 745
            ||||||||
Sbjct: 198 cacgcactg 190



 Score = 63.9 bits (32), Expect = 8e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                       
Query: 416 acacttcctctcgcaagccgccctgctcgggtgatgatgctcccgtctgtggcactcgtc 475
           ||||||| ||||||||  | | ||||| |||||||| |||||||| || |||||||| ||
Sbjct: 258 acacttcatctcgcaaaactctctgctagggtgatggtgctcccggctatggcactcatc 199

                                   
Query: 476 cacgcactgcttcttcctcgccgg 499
           ||||||||||| | |||| |||||
Sbjct: 198 cacgcactgctgcctcctggccgg 175



 Score = 44.1 bits (22), Expect = 0.72
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 258 cgtcacaccacctcgatgatggctccggccaccg 291
           |||||||||||||||| |||  ||||||||||||
Sbjct: 419 cgtcacaccacctcgaggattcctccggccaccg 386
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>gb|AF457987.1| Zea mays clone cho1c.pk003.b3, mRNA sequence
          Length = 460

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 258 cgtcacaccacctcgatgatggctccggccaccgcttcccagc 300
           |||||||||||||| | |||||| |||||||||| ||||||||
Sbjct: 173 cgtcacaccacctcaaggatggcgccggccaccgtttcccagc 131
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>gb|AC151472.2| Mus musculus BAC clone RP23-407N2 from chromosome 7, complete sequence
          Length = 196583

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 46     taaaagaaggaaaaggaacagag 68
              |||||||||||||||||||||||
Sbjct: 103388 taaaagaaggaaaaggaacagag 103410
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>gb|BT024168.1| Zea mays clone EL01N0323B09 mRNA sequence
          Length = 1597

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 258  cgtcacaccacctcgatgatggctccggccaccgcttcccagc 300
            |||||||||||||| | |||||  |||||||||| ||||||||
Sbjct: 1287 cgtcacaccacctcaaggatggggccggccaccgtttcccagc 1245
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>gb|AC159703.1| Trypanosoma brucei chromosome 8 clone RPCI93-30K1, complete sequence
          Length = 148802

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 210   agcgccattacattattcttattattatta 239
             |||||||||| |||||| ||||||||||||
Sbjct: 14664 agcgccattatattattattattattatta 14635
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>gb|AC159405.1| Trypanosoma brucei chromosome 8 clone RPCI93-11J15, complete sequence
          Length = 164873

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 210  agcgccattacattattcttattattatta 239
            |||||||||| |||||| ||||||||||||
Sbjct: 6708 agcgccattatattattattattattatta 6737
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 210     agcgccattacattattcttattattatta 239
               |||||||||| |||||| ||||||||||||
Sbjct: 1864482 agcgccattatattattattattattatta 1864453
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>gb|AC107531.8| Rattus norvegicus 1 BAC CH230-158N3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 173190

 Score = 44.1 bits (22), Expect = 0.72
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 214   ccattacattattcttattattatta 239
             ||||||||||||| ||||||||||||
Sbjct: 89877 ccattacattattattattattatta 89852
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>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 55134 cattacattattattattattatta 55110
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 219     acattattcttattattatta 239
               |||||||||||||||||||||
Sbjct: 1100498 acattattcttattattatta 1100478
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>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 219   acattattcttattattatta 239
             |||||||||||||||||||||
Sbjct: 47079 acattattcttattattatta 47099
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>gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, complete sequence
          Length = 151470

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 137697 cattacattattattattattatta 137673
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>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence
          Length = 33673

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   acattattcttattattatta 239
             |||||||||||||||||||||
Sbjct: 11404 acattattcttattattatta 11384
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>emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in linkage group 5, complete
              sequence
          Length = 155542

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 150660 cattacattattattattattatta 150684
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>emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 in linkage group 7,
             complete sequence
          Length = 50326

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 25313 cattacattattattattattatta 25289
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>emb|AL592427.6| Human DNA sequence from clone RP11-57F5 on chromosome X, complete
              sequence
          Length = 140691

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     aaggaaaaggaacagagttcc 72
              |||||||||||||||||||||
Sbjct: 132553 aaggaaaaggaacagagttcc 132533
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>emb|AL390997.10| Human DNA sequence from clone RP11-159G6 on chromosome Xq21.33-23,
              complete sequence
          Length = 112328

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 111851 cattacattattattattattatta 111827
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>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete
             sequence
          Length = 254449

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 95245 cattacattattattattattatta 95269
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>emb|AL355805.20| Human DNA sequence from clone RP11-29L10 on chromosome Xq21.1-21.33
            Contains a ribosomal protein L6 (RPL6) pseudogene,
            complete sequence
          Length = 76507

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 215  cattacattattcttattattatta 239
            |||||||||||| ||||||||||||
Sbjct: 1523 cattacattattattattattatta 1499
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>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gcatgcacgtttgcacgcacc 384
             |||||||||||||||||||||
Sbjct: 99763 gcatgcacgtttgcacgcacc 99783
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>emb|AL929358.1|PFA929358 Plasmodium falciparum strain 3D7, chromosome 9; segment 4/5
          Length = 254050

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ttacattattcttattattat 237
              |||||||||||||||||||||
Sbjct: 216232 ttacattattcttattattat 216212
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>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains
              part of a novel gene similar to CSMD (CUB and sushi
              multiple domains protein), complete sequence
          Length = 161104

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 135255 cattacattattattattattatta 135231
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>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 226945

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 87585 cattacattattattattattatta 87561
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>emb|BX537277.15| Zebrafish DNA sequence from clone DKEY-45D16 in linkage group 2,
             complete sequence
          Length = 263014

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   attacattattcttattattattag 240
             ||||||||||| |||||||||||||
Sbjct: 11815 attacattattattattattattag 11791
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>emb|BX548018.9| Zebrafish DNA sequence from clone DKEY-23O18 in linkage group 14,
              complete sequence
          Length = 113040

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 108972 cattacattattattattattatta 108996
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>emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, complete sequence
          Length = 171058

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    acattattcttattattatta 239
              |||||||||||||||||||||
Sbjct: 166059 acattattcttattattatta 166079
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>emb|BX005389.12| Zebrafish DNA sequence from clone DKEY-10F11 in linkage group 16,
              complete sequence
          Length = 221363

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 218297 cattacattattattattattatta 218273
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>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24,
             complete sequence
          Length = 167578

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 39342 cattacattattattattattatta 39318
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 268   cctcgatgatggctccggcca 288
             |||||||||||||||||||||
Sbjct: 55581 cctcgatgatggctccggcca 55601
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>gb|AC154109.3| Ornithorhynchus anatinus chromosome UNK clone OABb-200A1, complete
              sequence
          Length = 180985

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 219    acattattcttattattatta 239
              |||||||||||||||||||||
Sbjct: 123894 acattattcttattattatta 123914
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>emb|BX248328.6| Zebrafish DNA sequence from clone CH211-202H10, complete sequence
          Length = 194853

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 129952 cattacattattattattattatta 129928



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 129769 cattacattattattattattatta 129793
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>emb|BX294376.10| Zebrafish DNA sequence from clone CH211-117M20 in linkage group 5,
             complete sequence
          Length = 178400

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   acattattcttattattatta 239
             |||||||||||||||||||||
Sbjct: 98138 acattattcttattattatta 98118
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>dbj|AB073701.1| Borrelia duttonii plasmid DNA, complete sequence, strain:Ly
          Length = 44010

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   atgctgctactgaagctattg 127
             |||||||||||||||||||||
Sbjct: 42641 atgctgctactgaagctattg 42621
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>emb|BX530036.7| Zebrafish DNA sequence from clone DKEY-93M18 in linkage group 21,
              complete sequence
          Length = 211643

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 216    attacattattcttattattattag 240
              ||||||||||| |||||||||||||
Sbjct: 176901 attacattattattattattattag 176877
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>emb|AL929250.8| Zebrafish DNA sequence from clone CH211-137A2, complete sequence
          Length = 94534

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   attacattattcttattattattag 240
             ||||||||||| |||||||||||||
Sbjct: 46307 attacattattattattattattag 46283
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>emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, complete sequence
          Length = 193205

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 188400 cattacattattattattattatta 188424
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>emb|BX950189.14| Zebrafish DNA sequence from clone CH211-155P8 in linkage group 19,
             complete sequence
          Length = 92418

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 11957 cattacattattattattattatta 11981
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>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
              complete sequence
          Length = 201932

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    acattattcttattattatta 239
              |||||||||||||||||||||
Sbjct: 115392 acattattcttattattatta 115372
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>emb|AL713987.7| Zebrafish DNA sequence from clone BUSM1-145B16 in linkage group 9,
             complete sequence
          Length = 113891

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 50195 cattacattattattattattatta 50171
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>emb|BX004978.10| Zebrafish DNA sequence from clone DKEY-15P13 in linkage group 2, complete
              sequence
          Length = 184244

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 108499 cattacattattattattattatta 108475



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 108322 cattacattattattattattatta 108346
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 576    cgctcgatgacatcgtcaccgccgc 600
              ||||||||||||||||| |||||||
Sbjct: 828759 cgctcgatgacatcgtctccgccgc 828783
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>emb|AL954358.5| Zebrafish DNA sequence from clone CH211-226D12, complete sequence
          Length = 182858

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cattacattattcttattattatta 239
             |||||||||||| ||||||||||||
Sbjct: 81363 cattacattattattattattatta 81387
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>emb|AL929082.7| Zebrafish DNA sequence from clone CH211-113P18, complete sequence
          Length = 195316

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 135814 cattacattattattattattatta 135790
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>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    cattacattattcttattattatta 239
              |||||||||||| ||||||||||||
Sbjct: 176310 cattacattattattattattatta 176334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,155,523
Number of Sequences: 3902068
Number of extensions: 7155523
Number of successful extensions: 782591
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 779975
Number of HSP's gapped (non-prelim): 2616
length of query: 815
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 792
effective length of database: 17,143,297,704
effective search space: 13577491781568
effective search space used: 13577491781568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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