ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13m18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_195470.1| Oryza sativa (japonica cultivar-group) putative... 80 9e-12
2gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
3gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
5dbj|AK101612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
6dbj|AK072077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
10dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
12dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
13dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
14gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, compl... 44 0.49
15gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, comp... 42 1.9
16gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome ... 42 1.9
17emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chr... 42 1.9
18emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3... 42 1.9
19gb|AC099061.2| Homo sapiens chromosome 1 clone RP11-105D8, compl... 42 1.9
20gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, co... 42 1.9
21gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, com... 42 1.9
22dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 42 1.9
23gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosom... 40 7.7
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.7
25emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n... 40 7.7
26emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i2... 40 7.7
27ref|XM_648750.1| Entamoeba histolytica HM-1:IMSS auxin efflux ca... 40 7.7
28gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete... 40 7.7
29emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 i... 40 7.7
30emb|AL359997.8| Human DNA sequence from clone RP11-71A24 on chro... 40 7.7
31emb|AL121931.10|HS1131C10 Human DNA sequence from clone RP5-1131... 40 7.7
32emb|AL031174.1|SPBC1A45P S.pombe chromosome II cosmid c1A4 left ... 40 7.7
33ref|XM_396093.2| PREDICTED: Apis mellifera similar to GA10518-PA... 40 7.7
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
35gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complet... 40 7.7
36gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genom... 40 7.7
37ref|NM_138527.1| Rattus norvegicus prolactin-like protein L (Prl... 40 7.7
38gb|AC090946.2| Homo sapiens chromosome 3 clone RP11-2B2 map 3p, ... 40 7.7
39gb|AC087858.2| Homo sapiens chromosome 3 clone RP11-207E20 map 3... 40 7.7
40gb|AF226607.1|AF226607 Rattus norvegicus prolactin-like protein ... 40 7.7
41dbj|AB022883.1| Rattus norvegicus PLP-L mRNA for prolactin-like-... 40 7.7 
>ref|NM_195470.1| Oryza sativa (japonica cultivar-group) putative membrane protein
           (OJ1004_F02.11), mRNA
          Length = 1506

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 183 agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
           |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 512 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 453

                                                   
Query: 243 atattgatctcacttgagccagtttcgaaagacgatttac 282
           || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 452 attttgacatcacttgagtcagtttcgaaagacgacttac 413
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>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02
             map C8, complete sequence
          Length = 116304

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                         
Query: 183   agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
             |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 54639 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 54580

                                                     
Query: 243   atattgatctcacttgagccagtttcgaaagacgatttac 282
             || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 54579 attttgacatcacttgagtcagtttcgaaagacgacttac 54540



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 98    atgaaggaacatttgccgctttcacacccatgaagcctaag 138
             |||||||||||| | ||  ||||||||||||| ||||||||
Sbjct: 54725 atgaaggaacatatacctgtttcacacccatgtagcctaag 54685
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>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0014J14, complete sequence
          Length = 191397

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                         
Query: 183   agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
             |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 23379 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 23320

                                                     
Query: 243   atattgatctcacttgagccagtttcgaaagacgatttac 282
             || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 23319 attttgacatcacttgagtcagtttcgaaagacgacttac 23280



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 98    atgaaggaacatttgccgctttcacacccatgaagcctaag 138
             |||||||||||| | ||  ||||||||||||| ||||||||
Sbjct: 23465 atgaaggaacatatacctgtttcacacccatgtagcctaag 23425
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                           
Query: 183     agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
               |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 7198021 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 7197962

                                                       
Query: 243     atattgatctcacttgagccagtttcgaaagacgatttac 282
               || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 7197961 attttgacatcacttgagtcagtttcgaaagacgacttac 7197922



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 98      atgaaggaacatttgccgctttcacacccatgaagcctaag 138
               |||||||||||| | ||  ||||||||||||| ||||||||
Sbjct: 7198107 atgaaggaacatatacctgtttcacacccatgtagcctaag 7198067
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>dbj|AK101612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052E02, full
           insert sequence
          Length = 2053

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 183 agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
           |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 687 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 628

                                                   
Query: 243 atattgatctcacttgagccagtttcgaaagacgatttac 282
           || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 627 attttgacatcacttgagtcagtttcgaaagacgacttac 588
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>dbj|AK072077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116K24, full
           insert sequence
          Length = 1822

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                       
Query: 183 agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
           |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 494 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 435

                                                   
Query: 243 atattgatctcacttgagccagtttcgaaagacgatttac 282
           || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 434 attttgacatcacttgagtcagtttcgaaagacgacttac 395
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                           
Query: 183     agcaccccaccaagtagtaatgatgctgaaactgatggaattcttctccgcttgtgctca 242
               |||||||||||||||||||||| ||  || || ||||||||  || ||||||| || |||
Sbjct: 7201317 agcaccccaccaagtagtaatgctgtagacaccgatggaatgtttttccgcttatgttca 7201258

                                                       
Query: 243     atattgatctcacttgagccagtttcgaaagacgatttac 282
               || ||||  ||||||||| |||||||||||||||| ||||
Sbjct: 7201257 attttgacatcacttgagtcagtttcgaaagacgacttac 7201218



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 98      atgaaggaacatttgccgctttcacacccatgaagcctaag 138
               |||||||||||| | ||  ||||||||||||| ||||||||
Sbjct: 7201403 atgaaggaacatatacctgtttcacacccatgtagcctaag 7201363
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 165      agaatttccaaaagaaaaagcacccca 191
                ||||||| |||||||||||||||||||
Sbjct: 25611850 agaatttgcaaaagaaaaagcacccca 25611824
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                           
Query: 457     cataaactgtgatgcttgcttttggccattttcttgtatctcgagcacaattattgggtt 516
               ||||||| |||||||||||||| ||||  |||||| | ||  | ||| ||||||||||||
Sbjct: 8136778 cataaaccgtgatgcttgctttgggccgctttcttatttcaggggcataattattgggtt 8136719

                                      
Query: 517     tttgtgccatattattgagagga 539
                 ||| ||| | |||||||||||
Sbjct: 8136718 gatgtaccacactattgagagga 8136696
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>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0503B05
          Length = 156814

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                          
Query: 457    cataaactgtgatgcttgcttttggccattttcttgtatctcgagcacaattattgggtt 516
              ||||||| |||||||||||||| ||||  |||||| | ||  | ||| ||||||||||||
Sbjct: 124971 cataaaccgtgatgcttgctttgggccgctttcttatttcaggggcataattattgggtt 124912

                                     
Query: 517    tttgtgccatattattgagagga 539
                ||| ||| | |||||||||||
Sbjct: 124911 gatgtaccacactattgagagga 124889
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>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0523F01
          Length = 146419

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 165    agaatttccaaaagaaaaagcacccca 191
              ||||||| |||||||||||||||||||
Sbjct: 130167 agaatttgcaaaagaaaaagcacccca 130141
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0458E02
          Length = 154458

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 165   agaatttccaaaagaaaaagcacccca 191
             ||||||| |||||||||||||||||||
Sbjct: 35295 agaatttgcaaaagaaaaagcacccca 35269
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>dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108F20, full
            insert sequence
          Length = 3463

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 457  cataaactgtgatgcttgcttttggccattttcttgtatctcgagcacaattattgggtt 516
            ||||||| |||||||||||||| ||||  |||||| | ||  | ||| ||||||||||||
Sbjct: 1098 cataaaccgtgatgcttgctttgggccgctttcttatttcaggggcataattattgggtt 1039

                                   
Query: 517  tttgtgccatattattgagagga 539
              ||| ||| | |||||||||||
Sbjct: 1038 gatgtaccacactattgagagga 1016
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>gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, complete sequence
          Length = 177251

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 413   acaagatatcatatcaaaagttaaat 438
             |||||||||||||||||| |||||||
Sbjct: 57216 acaagatatcatatcaaaggttaaat 57241
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>gb|AC101727.8| Mus musculus chromosome 1, clone RP23-327G3, complete sequence
          Length = 196065

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tgttaataactaatatttgtg 55
             |||||||||||||||||||||
Sbjct: 51626 tgttaataactaatatttgtg 51606
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>gb|AC112154.4| Mus musculus BAC clone RP24-98L2 from chromosome 1, complete sequence
          Length = 200202

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    tgttaataactaatatttgtg 55
             |||||||||||||||||||||
Sbjct: 93752 tgttaataactaatatttgtg 93732
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>emb|AL390961.17| Human DNA sequence from clone RP13-16H11 on chromosome 10 Contains
             three novel genes, the gene for trans-prenyltransferase
             (TPT), the 3' end of the SSH3BP gene for spectrin SH3
             domain binding protein 1, a heat shock protein pseudogene
             and a CpG island, complete sequence
          Length = 173950

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 416   agatatcatatcaaaagttaaatagataa 444
             ||||| |||||||||||||||||| ||||
Sbjct: 22965 agataccatatcaaaagttaaataaataa 22993
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>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE
          Length = 136080

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 294   ttattatctggtaataaattgaaag 318
             ||||||||| |||||||||||||||
Sbjct: 64981 ttattatcttgtaataaattgaaag 65005
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>gb|AC099061.2| Homo sapiens chromosome 1 clone RP11-105D8, complete sequence
          Length = 140987

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 443    aaccatgtcaggtccataaac 463
              |||||||||||||||||||||
Sbjct: 132558 aaccatgtcaggtccataaac 132578
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>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence
          Length = 181460

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 443    aaccatgtcaggtccataaac 463
              |||||||||||||||||||||
Sbjct: 145380 aaccatgtcaggtccataaac 145360
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>gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, complete sequence
          Length = 195549

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 443    aaccatgtcaggtccataaac 463
              |||||||||||||||||||||
Sbjct: 136066 aaccatgtcaggtccataaac 136086
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>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 160    gcagtagaatttccaaaagaaaaag 184
              |||||||||||| ||||||||||||
Sbjct: 137365 gcagtagaatttgcaaaagaaaaag 137341
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>gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosome 18, complete
             sequence
          Length = 179314

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   cccaccaagtagtaatgatg 207
             ||||||||||||||||||||
Sbjct: 52700 cccaccaagtagtaatgatg 52719
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 499      gagcacaattattgggtttt 518
                ||||||||||||||||||||
Sbjct: 33909163 gagcacaattattgggtttt 33909144
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>emb|CR962127.1| Medicago truncatula chromosome 5 clone mth2-181n9, COMPLETE SEQUENCE
          Length = 119528

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 302   tggtaataaattgaaagatcaata 325
             ||||||||||||||||||| ||||
Sbjct: 48777 tggtaataaattgaaagataaata 48754
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>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE
          Length = 123473

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 306   aataaattgaaagatcaataaata 329
             |||||||||||| |||||||||||
Sbjct: 80115 aataaattgaaatatcaataaata 80138
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>ref|XM_648750.1| Entamoeba histolytica HM-1:IMSS auxin efflux carrier family protein
           (70.t00030) partial mRNA
          Length = 1176

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 161 cagtagaatttccaaaagaaaaag 184
           |||||| |||||||||||||||||
Sbjct: 355 cagtaggatttccaaaagaaaaag 332
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>gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete sequence
          Length = 217286

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aaattgaaagatcaataaat 328
              ||||||||||||||||||||
Sbjct: 173894 aaattgaaagatcaataaat 173913
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>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16,
             complete sequence
          Length = 91165

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    atatttgtgctgaaataaag 66
             ||||||||||||||||||||
Sbjct: 51985 atatttgtgctgaaataaag 51966
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>emb|AL359997.8| Human DNA sequence from clone RP11-71A24 on chromosome 9 Contains the 5'
              end of the ALDH1A1 gene for member A1 of the aldehyde
              dehydrogenase 1 family, a cytochrome P450 family 1
              subfamily A polypeptide 1 (CYP1A1) pseudogene and the ANXA1
              gene for annexin I, complete sequence
          Length = 169102

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 306    aataaattgaaagatcaataaata 329
              |||||||||||||||| |||||||
Sbjct: 121348 aataaattgaaagatccataaata 121325
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>emb|AL121931.10|HS1131C10 Human DNA sequence from clone RP5-1131C10 on chromosome 6q12-13,
             complete sequence
          Length = 133751

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   atttccaaaagaaaaagcac 187
             ||||||||||||||||||||
Sbjct: 53722 atttccaaaagaaaaagcac 53741
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>emb|AL031174.1|SPBC1A45P S.pombe chromosome II cosmid c1A4 left hand region 1-26184 bp
             Originates from chimeric cosmid
          Length = 26184

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   aataaatatgcatcagttga 341
             ||||||||||||||||||||
Sbjct: 16685 aataaatatgcatcagttga 16666
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>ref|XM_396093.2| PREDICTED: Apis mellifera similar to GA10518-PA (LOC412638), mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  taataaattgaaagatcaat 324
            ||||||||||||||||||||
Sbjct: 1545 taataaattgaaagatcaat 1564
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 499      gagcacaattattgggtttt 518
                ||||||||||||||||||||
Sbjct: 33999635 gagcacaattattgggtttt 33999616
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>gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complete sequence
          Length = 160930

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    agaatttccaaaagaaaaag 184
              ||||||||||||||||||||
Sbjct: 148970 agaatttccaaaagaaaaag 148951
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>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete
              sequence
          Length = 172337

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    gagcacaattattgggtttt 518
              ||||||||||||||||||||
Sbjct: 148528 gagcacaattattgggtttt 148547
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>ref|NM_138527.1| Rattus norvegicus prolactin-like protein L (Prlpl), mRNA
          Length = 844

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 tatcatatcaaaagttaaat 438
           ||||||||||||||||||||
Sbjct: 467 tatcatatcaaaagttaaat 486
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>gb|AC090946.2| Homo sapiens chromosome 3 clone RP11-2B2 map 3p, complete sequence
          Length = 171206

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 471  cttgcttttggccattttct 490
            ||||||||||||||||||||
Sbjct: 9295 cttgcttttggccattttct 9314
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>gb|AC087858.2| Homo sapiens chromosome 3 clone RP11-207E20 map 3p, complete sequence
          Length = 179723

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   cttgcttttggccattttct 490
             ||||||||||||||||||||
Sbjct: 55552 cttgcttttggccattttct 55533
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>gb|AF226607.1|AF226607 Rattus norvegicus prolactin-like protein L mRNA, complete cds
          Length = 735

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 tatcatatcaaaagttaaat 438
           ||||||||||||||||||||
Sbjct: 434 tatcatatcaaaagttaaat 453
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>dbj|AB022883.1| Rattus norvegicus PLP-L mRNA for prolactin-like-peptide, complete
           cds
          Length = 844

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 419 tatcatatcaaaagttaaat 438
           ||||||||||||||||||||
Sbjct: 467 tatcatatcaaaagttaaat 486


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,150,272
Number of Sequences: 3902068
Number of extensions: 6150272
Number of successful extensions: 124216
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123928
Number of HSP's gapped (non-prelim): 288
length of query: 566
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 543
effective length of database: 17,143,297,704
effective search space: 9308810653272
effective search space used: 9308810653272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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