ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13m17 |
|---|---|
| Clone Library Name | barley_pub |
>ICI2_HORVU (P01053) Subtilisin-chymotrypsin inhibitor-2A (CI-2A)| Length = 83 Score = 76.6 bits (187), Expect = 3e-14 Identities = 37/73 (50%), Positives = 53/73 (72%), Gaps = 3/73 (4%) Frame = -2 Query: 374 SSSDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV 195 + + D K WPELVG S+EEAKK+I++D+P+ +II V PVGT VT + R DRVR+FV Sbjct: 12 TGAGDRHNLKTEWPELVGKSVEEAKKVILQDKPEAQII-VLPVGTIVTMEYRIDRVRLFV 70 Query: 194 ---NTVAEIPRIG 165 + +A++PR+G Sbjct: 71 DKLDNIAQVPRVG 83
>ICIW_WHEAT (P82977) Subtilisin-chymotrypsin inhibitor WSCI| Length = 72 Score = 74.7 bits (182), Expect = 1e-13 Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 3/73 (4%) Frame = -2 Query: 374 SSSDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV 195 + + D +K WPELVG S+EEAKK+I++D+ + +I+ V PVGT VT + R DRVR+FV Sbjct: 1 TDTGDHHNQKTEWPELVGKSVEEAKKVILQDKSEAQIV-VLPVGTIVTMEYRIDRVRLFV 59 Query: 194 NT---VAEIPRIG 165 ++ +A++PR+G Sbjct: 60 DSLDKIAQVPRVG 72
>ICI3_HORVU (P08626) Subtilisin-chymotrypsin inhibitor-2B (CI-2B) (Fragment)| Length = 72 Score = 74.3 bits (181), Expect = 1e-13 Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 3/69 (4%) Frame = -2 Query: 362 DSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---N 192 D +K WPELV S+EEAKK+I++D+P+ +II V PVGT VT + R DRVR+FV + Sbjct: 5 DCQNQKTEWPELVEKSVEEAKKVILQDKPEAQII-VLPVGTIVTMEYRIDRVRLFVDRLD 63 Query: 191 TVAEIPRIG 165 +A++PR+G Sbjct: 64 NIAQVPRVG 72
>ICI1_LYCPE (P16231) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = -2 Query: 368 SDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN- 192 SD C K WPEL+G+ AK II K+ P + I + G+ VT+D R DRVR+FVN Sbjct: 41 SDSRCKGKQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNI 100 Query: 191 --TVAEIPRI 168 V +IPR+ Sbjct: 101 LGDVVQIPRV 110
>ICI_LUMTE (P83472) Chymotrypsin inhibitor precursor (LTCI)| Length = 86 Score = 59.3 bits (142), Expect = 4e-09 Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 3/69 (4%) Frame = -2 Query: 362 DSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN--- 192 D K SWPELVG ++EEAK I++DRPD +I+V P + VT D R RV IFVN Sbjct: 19 DISAVKTSWPELVGETLEEAKAQILEDRPDA-VIKVQPEHSPVTYDYRPSRVIIFVNKDG 77 Query: 191 TVAEIPRIG 165 VAE P G Sbjct: 78 NVAETPAAG 86
>ICIC_HORVU (P01054) Subtilisin-chymotrypsin inhibitor CI-1C| Length = 77 Score = 59.3 bits (142), Expect = 4e-09 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 5/68 (7%) Frame = -2 Query: 353 GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV-----NT 189 G K SWPE+VGMS E+AK+II++D+P+ + IEV PV V L F+ R+FV T Sbjct: 13 GAKTSWPEVVGMSAEKAKEIILRDKPNAQ-IEVIPVDAMV--PLNFNPNRVFVLVHKATT 69 Query: 188 VAEIPRIG 165 VA++ R+G Sbjct: 70 VAZVSRVG 77
>ICIB_HORVU (P16063) Subtilisin-chymotrypsin inhibitor CI-1B| Length = 83 Score = 58.9 bits (141), Expect = 6e-09 Identities = 32/63 (50%), Positives = 42/63 (66%) Frame = -2 Query: 353 GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEIP 174 G K SWPE+VGMS E+AK+II++D+PD + IEV PV V D +R+ I V VA P Sbjct: 23 GAKRSWPEVVGMSAEKAKEIILRDKPDAQ-IEVIPVDAMVPLDFNPNRIFILV-AVARTP 80 Query: 173 RIG 165 +G Sbjct: 81 TVG 83
>IER1_LYCES (P20076) Ethylene-responsive proteinase inhibitor 1 precursor| (Ethylene-responsive proteinase inhibitor I) Length = 119 Score = 58.9 bits (141), Expect = 6e-09 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TVAEI 177 K SWPEL+G + AK+II K+ P + +E G+A TEDLR +RVR+FVN V + Sbjct: 56 KESWPELLGTPAKFAKQIIQKENPKLTNVETLLNGSAFTEDLRCNRVRLFVNLLDIVVQT 115 Query: 176 PRIG 165 P++G Sbjct: 116 PKVG 119
>ITH5_CUCMA (P19873) Inhibitor of trypsin and hageman factor (CMTI-V)| Length = 68 Score = 57.0 bits (136), Expect = 2e-08 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Frame = -2 Query: 359 SCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---T 189 SC K+SWP LVG+ AK II + P+VK + + GT VT+D R +RVRI+VN Sbjct: 2 SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAV-ILEEGTPVTKDFRCNRVRIWVNKRGL 60 Query: 188 VAEIPRIG 165 V PRIG Sbjct: 61 VVSPPRIG 68
>ITR1_NICSY (Q02214) Trypsin inhibitor 1 precursor (Trypsin inhibitor I)| (NSTI-I) Length = 94 Score = 55.1 bits (131), Expect = 8e-08 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%) Frame = -2 Query: 371 SSDDSC--GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF 198 ++ SC KK +WPEL+G+ + A++II K+ + + G+ VT+D R +RVR+F Sbjct: 21 TAQSSCPGNKKETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLF 80 Query: 197 VNT---VAEIPRIG 165 VN V +IPR+G Sbjct: 81 VNVLDFVVQIPRVG 94
>ICIA_HORVU (P16062) Subtilisin-chymotrypsin inhibitor CI-1A| Length = 83 Score = 55.1 bits (131), Expect = 8e-08 Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV-NTVAEIPR 171 K SWPE+VGMS E+AK+II++D+P+ + +EV PV V L FD R+FV VA P Sbjct: 25 KTSWPEVVGMSAEKAKEIILRDKPNAQ-VEVIPVDAMV--HLNFDPNRVFVLVAVARTPT 81 Query: 170 IG 165 +G Sbjct: 82 VG 83
>IPIB_TOBAC (Q03199) Proteinase inhibitor I-B precursor (PI-IB) (Inhibitor of| microbial serine proteinases major isoform) Length = 107 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---VAEI 177 K WPEL+G + A +II K+ P + ++ GT VTEDLR +RVR+FVN V + Sbjct: 44 KERWPELLGTPAKFAMQIIQKENPKLTNVQTVLNGTPVTEDLRCNRVRLFVNVLDFVVQT 103 Query: 176 PRIG 165 P++G Sbjct: 104 PQVG 107
>IPIA_TOBAC (Q03198) Proteinase inhibitor I-A precursor (PI-IA) (Inhibitor of| microbial serine proteinases minor isoform) Length = 107 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---VAEI 177 K WPEL+G + A +II K+ P + ++ G VTEDLR +RVR+FVN + + Sbjct: 44 KERWPELLGTPAKFAMQIIQKENPKLTNVQTILNGGPVTEDLRCNRVRLFVNVLDFIVQT 103 Query: 176 PRIG 165 P+IG Sbjct: 104 PQIG 107
>BGIA_MOMCH (P24076) Glu S.griseus protease inhibitor (BGIA)| Length = 68 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTV 186 C K SWP+LVG + AK +I ++ P V+ + + VG+ VT D R DRVR++V V Sbjct: 3 CQGKRSWPQLVGSTGAAAKAVIERENPRVRAV-IVRVGSPVTADFRCDRVRVWVTERGIV 61 Query: 185 AEIPRIG 165 A P IG Sbjct: 62 ARPPAIG 68
>ICI1_CANLI (P81712) Subtilisin inhibitor CLSI-I| Length = 65 Score = 50.4 bits (119), Expect = 2e-06 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Frame = -2 Query: 350 KKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTVAE 180 +K SWPELVG++ EEA+KI K+ I+V P G+ VT D + RVR++V N V Sbjct: 3 RKTSWPELVGVTAEEAEKI--KEEMSGVEIQVVPPGSFVTADYKPQRVRLYVDESNKVTR 60 Query: 179 IPRIG 165 P IG Sbjct: 61 TPGIG 65
>ICI1_SOLTU (Q00783) Proteinase inhibitor 1 precursor (Proteinase inhibitor I)| Length = 107 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---V 186 C K WPEL+G+ + AK II K+ + + + G+ VT D+R DRVR+F N V Sbjct: 41 CKGKLRWPELIGVPTKLAKGIIEKENSLISNVHILLNGSPVTLDIRCDRVRLFDNILGYV 100 Query: 185 AEIPRIG 165 +IP +G Sbjct: 101 VDIPVVG 107
>ICIS_VICFA (P08820) Subtilisin inhibitor (Fragment)| Length = 62 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/59 (44%), Positives = 41/59 (69%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEIPR 171 + SWPELVG+S EEA+K I ++ P+ + I+V P + VT D +F RVR++V+ ++ R Sbjct: 1 RTSWPELVGVSAEEARK-IKEEMPEAE-IQVVPQDSFVTADYKFQRVRLYVDESNKVVR 57
>ICIA_SOLTU (P01052) Chymotrypsin inhibitor I, A, B and C subunits| Length = 71 Score = 49.7 bits (117), Expect = 3e-06 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF---VNTV 186 C K WPEL+G+ + AK+II K + + + G+ VT D R +RVR+F + +V Sbjct: 5 CDGKLQWPELIGVPTKLAKEIIEKQNSLISNVHILLNGSPVTMDFRCNRVRLFDDILGSV 64 Query: 185 AEIPRI 168 +IPR+ Sbjct: 65 VQIPRV 70
>ICID_SOLTU (P08454) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) (Chymotrypsin inhibitor I, D subunit) Length = 107 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TV 186 C K WPEL+G+ + AK II K+ + +++ G+ VT D R +RVR+F N V Sbjct: 41 CNGKQRWPELIGVPTKLAKGIIEKENSLITNVQILLNGSPVTMDYRCNRVRLFDNILGDV 100 Query: 185 AEIPRI 168 +IPR+ Sbjct: 101 VQIPRV 106
>ICI1_LYCES (P05118) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/55 (41%), Positives = 33/55 (60%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN 192 C K WPEL+G+ + AK+II K+ P + I + G+ +T D DRVR+F N Sbjct: 45 CEGKQMWPELIGVPTKLAKEIIEKENPSITNIPILLSGSPITLDYLCDRVRLFDN 99
>ICI1_PHAAN (P16064) Subtilisin inhibitor 1 (Subtilisin inhibitor I) (ASI-I)| [Contains: Subtilisin inhibitor 2 (Subtilisin inhibitor II) (ASI-II)] Length = 92 Score = 46.2 bits (108), Expect = 4e-05 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTVAEI 177 K SWPELVG++ E+A+ I ++ DV+ I+V P + VT D RVR++V N V Sbjct: 30 KTSWPELVGVTAEQAETKIKEEMVDVQ-IQVSPHDSFVTADYNPKRVRLYVDESNKVTRT 88 Query: 176 PRIG 165 P IG Sbjct: 89 PSIG 92
>ICIC_HIRME (P01051) Eglin C| Length = 70 Score = 43.1 bits (100), Expect = 3e-04 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Frame = -2 Query: 341 SWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF----VNTVAEIP 174 S+PE+VG ++++A++ P + P G+ VT DLR++RVR+F N V +P Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVY-FLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVP 67 Query: 173 RIG 165 +G Sbjct: 68 HVG 70
>ICI_LINUS (P82381) Proteinase inhibitor (LUTI)| Length = 69 Score = 42.7 bits (99), Expect = 4e-04 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TV 186 C K +WPELVG S A + ++ +V I V G+A+T+D R DRV + VN V Sbjct: 4 CPGKNAWPELVGKSGNMAAATVERENRNVHAI-VLKEGSAMTKDFRCDRVWVIVNDHGVV 62 Query: 185 AEIPRI 168 +P I Sbjct: 63 TSVPHI 68
>ATSI_AMACA (P80211) Trypsin/subtilisin inhibitor (ATSI)| Length = 69 Score = 38.1 bits (87), Expect = 0.010 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = -2 Query: 356 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEI 177 C K WPELVG +A II ++ P+V+ I V + T+D R DRV + V++ + Sbjct: 4 CPGKQEWPELVGEYGYKAAAIIERENPNVRSI-VKHERSGFTKDFRCDRVWVVVDSTGVV 62 Query: 176 PR 171 R Sbjct: 63 VR 64
>ICI_EISHO (P83830) Chymotrypsin inhibitor (EHCI) (Fragment)| Length = 41 Score = 36.6 bits (83), Expect = 0.030 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = -2 Query: 350 KKASWPELVGMSIEEAKKIIMKDRPDVKII 261 +KA+WPELVG + EEA+ I+ D+P+ ++ Sbjct: 6 EKAAWPELVGKTPEEARAQILLDKPNANVV 35
>YPEC_SHIFL (P64544) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.43 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 327 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 229 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>YPEC_ECOLI (P64542) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.43 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 327 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 229 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>YPEC_ECO57 (P64543) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.43 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 327 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 229 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>CART1_RAT (Q63087) Cartilage homeoprotein 1 (CART-1)| Length = 326 Score = 32.0 bits (71), Expect = 0.73 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -2 Query: 446 NSIRIIVHQSRPESAWFSSTGTRMSSSDDSCGKKASWPELVGMSIEEAKKIIMKDR-PDV 270 N++R+ + PE + G + S+ S K+ + +EE +K+ K PDV Sbjct: 100 NNLRMSPVKGMPEKSELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDV 159 Query: 269 KIIEVFPVGTAVTE 228 + E + T +TE Sbjct: 160 YVREQLALRTELTE 173
>CART1_MOUSE (Q8C8B0) Cartilage homeoprotein 1 (CART-1)| Length = 326 Score = 32.0 bits (71), Expect = 0.73 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -2 Query: 446 NSIRIIVHQSRPESAWFSSTGTRMSSSDDSCGKKASWPELVGMSIEEAKKIIMKDR-PDV 270 N++R+ + PE + G + S+ S K+ + +EE +K+ K PDV Sbjct: 100 NNLRMSPVKGMPEKSELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDV 159 Query: 269 KIIEVFPVGTAVTE 228 + E + T +TE Sbjct: 160 YVREQLALRTELTE 173
>NEF_HV2SB (P12447) Nef protein (Negative factor) (F-protein) (3'ORF)| Length = 255 Score = 32.0 bits (71), Expect = 0.73 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = -1 Query: 390 NRYENELLGRLLRQEGVMAGAGWDVHRGGEEDHHEGQARRE 268 +R L RLLR G G WD GG HEG R + Sbjct: 9 SRPSRGLQERLLRARGGACGGLWDESEGGYSQFHEGSGREQ 49
>PAX8_RAT (P51974) Paired box protein Pax-8| Length = 458 Score = 31.6 bits (70), Expect = 0.95 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Frame = -1 Query: 381 ENELLGRLLRQEGVM--AGAGWDVHRGGEEDHHEGQAR----REDHRGLPSRHR-----G 235 +++ LG G++ A AG D HRG +D +GQ R + P +H G Sbjct: 172 QSDSLGSTYSIHGLLGIAQAGSDTHRGRCDDSDQGQCRLSIDSQSSSSGPRKHLRTDTFG 231 Query: 234 HRGLEVRPCPHLRQH 190 LE CP RQH Sbjct: 232 QHHLEPLECPFERQH 246
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = -1 Query: 327 GWDVHRGGEE-DHHEGQARREDHRGLPSR--HRGHRGLEVRPCPHLRQHSCG 181 G + HRG E+ +HH+G +E H+G + H+G + E P ++H G Sbjct: 352 GPEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKG 403
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 8/48 (16%) Frame = -1 Query: 345 GVMAGAGWD-VHRG-------GEEDHHEGQARREDHRGLPSRHRGHRG 226 G M G+G H G G H R DHRG P HRGH G Sbjct: 838 GSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPHEHRGHDG 885
>PRM2_MACNE (P35298) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 2.1 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = -1 Query: 315 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCG 181 HRG +RR HR RHR R R C H R+H G Sbjct: 48 HRGHSHHRRRRCSRRRLHRIHRRRHRSCRRRRRRSCRHRRRHRRG 92
>PRM2_MACFU (P61253) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 2.1 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = -1 Query: 315 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCG 181 HRG +RR HR RHR R R C H R+H G Sbjct: 48 HRGHSHHRRRRCSRRRLHRIHRRRHRSCRRRRRRSCRHRRRHRRG 92
>SOX8_CHICK (P57074) Transcription factor SOX-8| Length = 470 Score = 30.0 bits (66), Expect = 2.8 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Frame = -1 Query: 441 DQDHRPSVETRERV-VQFNRYENELLGRLLRQEGVMAGAGWDVHRGGEEDHHEGQARRED 265 + + RP VE ER+ VQ + + + R++ V AG D G E HH G + Sbjct: 152 ENEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKAGQS-DSDSGAELSHHAGTQIYKA 210 Query: 264 HRGLPSRHRGHRGLEVRPCPH 202 GL GH E PH Sbjct: 211 DSGLGGMADGHHHGEHAGQPH 231
>PSB1_TRYBB (Q9U794) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome beta 6 subunit) Length = 258 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -1 Query: 297 DHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCGDPPHW 166 +HH G+A H G P + G V P LRQ + G P HW Sbjct: 7 EHHVGEANTLQHHGYPRK----LGNSVLTLP-LRQGAKGHPQHW 45
>VL2_HPV53 (P36764) Minor capsid protein L2| Length = 463 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 241 VPTGKTSMIFTSGLSFMMIFFASSMDIPTSSGHDAFLP 354 +PT + F+ S + I F +S D+P SG D LP Sbjct: 372 LPTNTVPLSFSGSTSNVTIPFGTSWDVPIYSGPDVVLP 409
>DPO3A_ECOLI (P10443) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1160 Score = 29.6 bits (65), Expect = 3.6 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Frame = -2 Query: 446 NSIRIIVHQS----RPESAWFSSTGTRMSSSDDSCGKKASWPELVGMSIEEAKKIIMKDR 279 + IR+ +H P+ S M S ++ C A PE + ++E AK+ + R Sbjct: 213 HEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVR 272 Query: 278 PDVKIIEVFPVGTAVTEDLRFDRVR 204 + FP G TED R + Sbjct: 273 LGEYFLPQFPTGDMSTEDYLVKRAK 297
>YGJK_CAEEL (Q9XUC4) Hypothetical protein T28F3.3 in chromosome IV| Length = 393 Score = 29.3 bits (64), Expect = 4.7 Identities = 11/41 (26%), Positives = 18/41 (43%) Frame = -1 Query: 342 VMAGAGWDVHRGGEEDHHEGQARREDHRGLPSRHRGHRGLE 220 ++ GW+ H DHHE D + + H HR ++ Sbjct: 34 ILTKVGWNDHSEELHDHHEHDHDHHDEQLIRKNHTSHREIQ 74
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/49 (28%), Positives = 15/49 (30%) Frame = -1 Query: 315 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCGDPPH 169 H E+HHE H H H PH H PPH Sbjct: 62 HHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPH 110
>GPA8_DICDI (P34046) Guanine nucleotide-binding protein alpha-8 subunit (G| alpha-8) Length = 403 Score = 29.3 bits (64), Expect = 4.7 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -2 Query: 347 KASWPELVGMSIEEAKKIIMKDRPDVK 267 K +W E G+ +EE KK++MK D+K Sbjct: 331 KYTWEEAKGILLEENKKVLMKATKDLK 357
>CFDP1_MOUSE (O88271) Craniofacial development protein 1 (Bucentaur) (27 kDa| craniofacial protein) (Protein Cp27) Length = 295 Score = 29.3 bits (64), Expect = 4.7 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = -1 Query: 450 EEFD-QDHRPSVETRERVVQFNRYENELLGRLLRQEGVMAGAGWDVHRGGEEDHHEGQAR 274 EEFD +D S E + + Y + + L++++ V GEE + + + Sbjct: 2 EEFDSEDFSTSDEDEDYLPSGGEYSEDDVNELVKEDEV----------DGEEQAEKTKGK 51 Query: 273 REDHRGLPSRHRGHRGL 223 R +G+P+R R GL Sbjct: 52 RRKAQGIPARKRKQSGL 68
>V143_NPVOP (Q83950) ATP-dependent DNA helicase P143 (EC 3.6.1.-)| Length = 1223 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = +1 Query: 190 VLTKMRTRSNLKSSVTAVPTG----KTSMIFTSGLSFMMIFFASSMDIPTSSGHDA-FLP 354 +L+KM ++ + +T V G K F S+M++ FA+S+ +PT G A +LP Sbjct: 859 ILSKMDVQNYPVAYLTQVVEGYLYFKRYTNFNHASSYMLMHFAASLSVPTDYGRKAVYLP 918
>CFDP1_HUMAN (Q9UEE9) Craniofacial development protein 1 (Bucentaur)| Length = 299 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = -1 Query: 450 EEFD-QDHRPSVETRERVVQFNRYENELLGRLLRQEGVMAGAGWDVHRGGEEDHHEGQAR 274 EEFD +D S E + V Y + + L++++ V GEE + Q + Sbjct: 2 EEFDSEDFSTSEEDEDYVPSGGEYSEDDVNELVKEDEV----------DGEEQTQKTQGK 51 Query: 273 REDHRGLPSRHRGHRGLEV 217 + + +P+R R GL + Sbjct: 52 KRKAQSIPARKRRQGGLSL 70
>DEOC_BACHD (Q9KD67) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 224 Score = 28.9 bits (63), Expect = 6.2 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -2 Query: 293 IMKDRPDVKIIEV--FPVGTAVTEDLRFDRVRIFVNTVAEIPRI 168 ++KD PDVK+ V FP+G E F+ N E+ + Sbjct: 51 LLKDAPDVKVCTVIGFPLGATTPEVKAFETTNAIENGATEVDMV 94
>GLB_PSEDC (P26914) Extracellular globin precursor| Length = 333 Score = 28.5 bits (62), Expect = 8.1 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 321 DVHRGGEEDHHEGQARREDH 262 D H E+DHHEG+ + E H Sbjct: 314 DKHAKAEKDHHEGEHKEEHH 333
>ATG3_CANAL (Q5ABQ7) Autophagy-related protein 3 (Autophagy-related E2-like| conjugation enzyme ATG3) Length = 333 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = +3 Query: 129 THVNRIEQEAKLANAGDLRNCVDEDADTVEPQVLGDRGADWEDLDDLHV 275 TH ++I + ++ D+ + +DE+A+ E +GD D ++ DDL + Sbjct: 123 THDSQINKGEEI---NDIDDFIDENAEEQEHDQIGDHELDDDEFDDLDI 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,730,130 Number of Sequences: 219361 Number of extensions: 1067699 Number of successful extensions: 3650 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3495 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3625 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
