ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478781.1| Oryza sativa (japonica cultivar-group), mRNA 591 e-165
2dbj|AK101604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 591 e-165
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 523 e-145
4dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 523 e-145
5ref|NM_100196.2| Arabidopsis thaliana unknown protein AT1G03140 ... 163 8e-37
6gb|AY051020.1| Arabidopsis thaliana unknown protein (At1g03140) ... 163 8e-37
7gb|AF360230.1| Arabidopsis thaliana unknown protein (At1g03140) ... 163 8e-37
8gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 ... 163 8e-37
9ref|NM_104337.1| Arabidopsis thaliana unknown protein AT1G54590 ... 100 1e-17
10gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis tha... 100 1e-17
11ref|XM_469417.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 68 3e-08
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 3e-08
14ref|XM_747974.1| Aspergillus fumigatus Af293 mRNA splicing facto... 68 3e-08
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
16dbj|AK120078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
17ref|XM_653144.1| Aspergillus nidulans FGSC A4 hypothetical prote... 62 2e-06
18ref|XM_417229.1| PREDICTED: Gallus gallus similar to Pre-mRNA sp... 60 9e-06
19gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 60 9e-06
20emb|CR354060.1| Gallus gallus finished cDNA, clone ChEST370f14 60 9e-06
21gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cance... 56 1e-04
22gb|BC004573.1| Mus musculus PRP18 pre-mRNA processing factor 18 ... 56 1e-04
23ref|XM_584287.2| PREDICTED: Bos taurus similar to Pre-mRNA splic... 56 1e-04
24ref|XM_781064.1| PREDICTED: Strongylocentrotus purpuratus simila... 56 1e-04
25gb|BC058631.1| Mus musculus PRP18 pre-mRNA processing factor 18 ... 56 1e-04
26ref|NM_026045.3| Mus musculus PRP18 pre-mRNA processing factor 1... 56 1e-04
27dbj|AK139720.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 56 1e-04
28dbj|AK135890.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 56 1e-04
29dbj|AK135707.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 56 1e-04
30dbj|AK161550.1| Mus musculus adult male pituitary gland cDNA, RI... 56 1e-04
31gb|BC113323.1| Bos taurus cDNA clone MGC:137878 IMAGE:8082762, c... 56 1e-04
32dbj|AK036668.1| Mus musculus adult male bone cDNA, RIKEN full-le... 56 1e-04
33dbj|AK028921.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 56 1e-04
34dbj|AK035073.1| Mus musculus 12 days embryo embryonic body betwe... 56 1e-04
35emb|AL928550.20| Mouse DNA sequence from clone RP23-272I15 on ch... 56 1e-04
36gb|BC028306.1| Mus musculus cDNA clone IMAGE:3496857, containing... 56 1e-04
37gb|AY118327.1| Drosophila melanogaster LD21120 full insert cDNA 52 0.002
38ref|NM_142519.1| Drosophila melanogaster Prp18 CG6011-RA (Prp18)... 52 0.002
39gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, r... 52 0.002
40gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, r... 52 0.002
41ref|NM_138523.1| Rattus norvegicus PRP18 pre-mRNA processing fac... 52 0.002
42gb|AF244920.1|AF244920 Rattus norvegicus potassium channel regul... 52 0.002
43gb|AF170829.1|AF170829 Drosophila melanogaster putative protein ... 52 0.002
44gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62... 52 0.002
45emb|AL034490.1|SPCC126 S.pombe chromosome III cosmid c126 50 0.008
46ref|NM_001023448.1| Schizosaccharomyces pombe 972h- hypothetical... 50 0.008
47ref|NM_003675.3| Homo sapiens PRP18 pre-mRNA processing factor 1... 48 0.032
48ref|XM_852169.1| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.032
49ref|XM_852131.1| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.032
50ref|XM_535182.2| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.032
51gb|BC000794.1| Homo sapiens PRP18 pre-mRNA processing factor 18 ... 48 0.032
52emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chr... 48 0.032
53emb|CR857737.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0135 (from cl... 48 0.032
54emb|CR606297.1| full-length cDNA clone CL0BB016ZH02 of Neuroblas... 48 0.032
55gb|AF087997.1|HUMYX43G09 Homo sapiens full length insert cDNA cl... 48 0.032
56emb|CT485767.1| Xenopus tropicalis finished cDNA, clone TNeu108h19 48 0.032
57gb|U51990.1|HSU51990 Human hPrp18 mRNA, complete cds 48 0.032
58dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.51
59gb|BC098551.1| Danio rerio zgc:110264, mRNA (cDNA clone MGC:1102... 42 2.0
60gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 42 2.0
61gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 42 2.0
62ref|NM_001033590.1| Danio rerio zgc:110264 (zgc:110264), mRNA 42 2.0
63gb|BC090228.1| Xenopus laevis cDNA clone MGC:85069 IMAGE:6327417... 42 2.0
64ref|XM_518782.1| PREDICTED: Pan troglodytes utrophin (LOC463046)... 40 7.9
65ref|XM_360307.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.9
66ref|XM_364404.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.9
67gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence 40 7.9
68emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chr... 40 7.9
69emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in... 40 7.9
70dbj|AB228140.1| Aspergillus oryzae cDNA, contig sequence: AoEST5013 40 7.9
71dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 7.9
72ref|NM_007124.1| Homo sapiens utrophin (homologous to dystrophin... 40 7.9
73gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, com... 40 7.9
74gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, comple... 40 7.9
75emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, c... 40 7.9
76emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, comple... 40 7.9
77emb|X69086.1|HSMUPS H.sapiens mRNA for utrophin 40 7.9 
>ref|XM_478781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1607

 Score =  591 bits (298), Expect = e-165
 Identities = 452/502 (90%), Gaps = 1/502 (0%)
 Strand = Plus / Minus

                                                                        
Query: 79   ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 137
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 138  ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 197
            | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                                                        
Query: 198  agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 257
             ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 1295

                                                                        
Query: 258  gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 317
            | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1294 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 1235

                                                                        
Query: 318  cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 377
            | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 1234 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 1175

                                                                        
Query: 378  taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 437
            |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1174 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 1115

                                                                        
Query: 438  ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 497
            |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 1114 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 1055

                                                                        
Query: 498  tacggatgtcatcaggaagaaccttcttcctgcagaactcaaacagtggactgagatacc 557
             ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 1054 gacggatgtcatcaggaagaacctgcttcctgcaaaactcaaacagggggctgagatacc 995

                                  
Query: 558  gcgcacactgcttgaacgttgc 579
            ||||||| |||||||| |||||
Sbjct: 994  gcgcacattgcttgaaggttgc 973
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>dbj|AK101604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L15, full
            insert sequence
          Length = 1608

 Score =  591 bits (298), Expect = e-165
 Identities = 452/502 (90%), Gaps = 1/502 (0%)
 Strand = Plus / Minus

                                                                        
Query: 79   ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 137
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 138  ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 197
            | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                                                        
Query: 198  agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 257
             ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 1295

                                                                        
Query: 258  gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 317
            | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1294 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 1235

                                                                        
Query: 318  cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 377
            | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 1234 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 1175

                                                                        
Query: 378  taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 437
            |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1174 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 1115

                                                                        
Query: 438  ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 497
            |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 1114 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 1055

                                                                        
Query: 498  tacggatgtcatcaggaagaaccttcttcctgcagaactcaaacagtggactgagatacc 557
             ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 1054 gacggatgtcatcaggaagaacctgcttcctgcaaaactcaaacagggggctgagatacc 995

                                  
Query: 558  gcgcacactgcttgaacgttgc 579
            ||||||| |||||||| |||||
Sbjct: 994  gcgcacattgcttgaaggttgc 973
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  523 bits (264), Expect = e-145
 Identities = 400/444 (90%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                            
Query: 79       ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 137
                |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 23034487 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 23034546

                                                                            
Query: 138      ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 197
                | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 23034547 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 23034606

                                                                            
Query: 198      agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 257
                 ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 23034607 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 23034666

                                                                            
Query: 258      gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 317
                | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 23034667 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 23034726

                                                                            
Query: 318      cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 377
                | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 23034727 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 23034786

                                                                            
Query: 378      taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 437
                |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 23034787 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 23034846

                                                                            
Query: 438      ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 497
                |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 23034847 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 23034906

                                        
Query: 498      tacggatgtcatcaggaagaacct 521
                 |||||||||||||||||||||||
Sbjct: 23034907 gacggatgtcatcaggaagaacct 23034930



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 518      accttcttcctgcagaactcaaacagtggactgagataccgcgcacactgcttgaacgtt 577
                |||| ||||||||| ||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 23036171 acctgcttcctgcaaaactcaaacagggggctgagataccgcgcacattgcttgaaggtt 23036230

                  
Query: 578      gc 579
                ||
Sbjct: 23036231 gc 23036232
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  523 bits (264), Expect = e-145
 Identities = 400/444 (90%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                          
Query: 79     ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 137
              |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 109701 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 109760

                                                                          
Query: 138    ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 197
              | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 109761 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 109820

                                                                          
Query: 198    agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 257
               ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 109821 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 109880

                                                                          
Query: 258    gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 317
              | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 109881 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 109940

                                                                          
Query: 318    cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 377
              | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 109941 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 110000

                                                                          
Query: 378    taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 437
              |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 110001 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 110060

                                                                          
Query: 438    ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 497
              |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 110061 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 110120

                                      
Query: 498    tacggatgtcatcaggaagaacct 521
               |||||||||||||||||||||||
Sbjct: 110121 gacggatgtcatcaggaagaacct 110144



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                          
Query: 518    accttcttcctgcagaactcaaacagtggactgagataccgcgcacactgcttgaacgtt 577
              |||| ||||||||| ||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 111385 acctgcttcctgcaaaactcaaacagggggctgagataccgcgcacattgcttgaaggtt 111444

                
Query: 578    gc 579
              ||
Sbjct: 111445 gc 111446
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>ref|NM_100196.2| Arabidopsis thaliana unknown protein AT1G03140 mRNA, complete cds
          Length = 1443

 Score =  163 bits (82), Expect = 8e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 290  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 349
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1153 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1094

                                                                        
Query: 350  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 409
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1093 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 1034

                                                  
Query: 410  gcgttcccaatggccagcttgatgtattggtccattgc 447
            |||||||| || || || |||||||| |||||||||||
Sbjct: 1033 gcgttcccgatagctagtttgatgtagtggtccattgc 996
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>gb|AY051020.1| Arabidopsis thaliana unknown protein (At1g03140) mRNA, complete cds
          Length = 1294

 Score =  163 bits (82), Expect = 8e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 290  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 349
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1073 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1014

                                                                        
Query: 350  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 409
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1013 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 954

                                                  
Query: 410  gcgttcccaatggccagcttgatgtattggtccattgc 447
            |||||||| || || || |||||||| |||||||||||
Sbjct: 953  gcgttcccgatagctagtttgatgtagtggtccattgc 916
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>gb|AF360230.1| Arabidopsis thaliana unknown protein (At1g03140) mRNA, complete cds
          Length = 1452

 Score =  163 bits (82), Expect = 8e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 290  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 349
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1153 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1094

                                                                        
Query: 350  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 409
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1093 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 1034

                                                  
Query: 410  gcgttcccaatggccagcttgatgtattggtccattgc 447
            |||||||| || || || |||||||| |||||||||||
Sbjct: 1033 gcgttcccgatagctagtttgatgtagtggtccattgc 996
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>gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 sequence, complete sequence
          Length = 78341

 Score =  163 bits (82), Expect = 8e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 290   gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 349
             |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 10838 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 10779

                                                                         
Query: 350   atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 409
             ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 10778 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 10719

                                                   
Query: 410   gcgttcccaatggccagcttgatgtattggtccattgc 447
             |||||||| || || || |||||||| |||||||||||
Sbjct: 10718 gcgttcccgatagctagtttgatgtagtggtccattgc 10681
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>ref|NM_104337.1| Arabidopsis thaliana unknown protein AT1G54590 mRNA, complete cds
          Length = 771

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 127/152 (83%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 290 gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacact---gttcgtg 346
           |||||||| |||||||||||||| |||| |||||| || ||||| |||||   | | || 
Sbjct: 581 gactgaagatacttgcgagtggtttcgttattcatgatgtgagcaacactactgctagta 522

                                                                       
Query: 347 taaatcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccat 406
            ||||||||||||| |||||||| ||||| |||||||||||||| || || || ||||||
Sbjct: 521 gaaatcttctctcgggcagaacgttcgtgaataccaaccatagtcacaccgatgggccat 462

                                           
Query: 407 ggggcgttcccaatggccagcttgatgtattg 438
           || |||||||| ||||| || |||||| ||||
Sbjct: 461 ggtgcgttccctatggctagtttgatgaattg 430
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>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 127/152 (83%), Gaps = 3/152 (1%)
 Strand = Plus / Plus

                                                                         
Query: 290   gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacact---gttcgtg 346
             |||||||| |||||||||||||| |||| |||||| || ||||| |||||   | | || 
Sbjct: 20262 gactgaagatacttgcgagtggtttcgttattcatgatgtgagcaacactactgctagta 20321

                                                                         
Query: 347   taaatcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccat 406
              ||||||||||||| |||||||| ||||| |||||||||||||| || || || ||||||
Sbjct: 20322 gaaatcttctctcgggcagaacgttcgtgaataccaaccatagtcacaccgatgggccat 20381

                                             
Query: 407   ggggcgttcccaatggccagcttgatgtattg 438
             || |||||||| ||||| || |||||| ||||
Sbjct: 20382 ggtgcgttccctatggctagtttgatgaattg 20413
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>ref|XM_469417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1717

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Minus

                                                                        
Query: 262  ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 321
            |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 1371 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 1312

                                                                        
Query: 322  cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 381
            ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 1311 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 1252

                                                                  
Query: 382  aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 435
             ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 1251 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 1198



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  gccaggctgttgaactccac 231
            ||||||||||||||||||||
Sbjct: 1421 gccaggctgttgaactccac 1402
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                         
Query: 262   ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 321
             |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 92133 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 92192

                                                                         
Query: 322   cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 381
             ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 92193 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 92252

                                                                   
Query: 382   aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 435
              ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 92253 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 92306



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gccaggctgttgaactccac 231
             ||||||||||||||||||||
Sbjct: 92083 gccaggctgttgaactccac 92102
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                            
Query: 262      ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 321
                |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 27848003 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 27848062

                                                                            
Query: 322      cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 381
                ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 27848063 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 27848122

                                                                      
Query: 382      aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 435
                 ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 27848123 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 27848176



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      gccaggctgttgaactccac 231
                ||||||||||||||||||||
Sbjct: 27847953 gccaggctgttgaactccac 27847972
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>ref|XM_747974.1| Aspergillus fumigatus Af293 mRNA splicing factor Prp18 (Afu1g16990)
           partial mRNA
          Length = 1119

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 352 cttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggcca 405
           ||||||||| || || ||||||||||||||||||||||| || |||||||||||
Sbjct: 984 cttctctcgggctgatcgctcgtggataccaaccatagtcacaccaataggcca 931
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                            
Query: 262      ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 321
                |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 27939327 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 27939386

                                                                            
Query: 322      cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 381
                ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 27939387 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 27939446

                                                                      
Query: 382      aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 435
                 ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 27939447 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 27939500



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      gccaggctgttgaactccac 231
                ||||||||||||||||||||
Sbjct: 27939277 gccaggctgttgaactccac 27939296
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>dbj|AK120078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011B03, full
            insert sequence
          Length = 2855

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 139/174 (79%)
 Strand = Plus / Minus

                                                                        
Query: 262  ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 321
            |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 2397 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 2338

                                                                        
Query: 322  cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 381
            ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 2337 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 2278

                                                                  
Query: 382  aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 435
             ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 2277 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 2224



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  gccaggctgttgaactccac 231
            ||||||||||||||||||||
Sbjct: 2447 gccaggctgttgaactccac 2428
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>ref|XM_653144.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0632.2), mRNA
          Length = 1116

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 353 ttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatg 407
           |||||||| || ||||| ||||| ||||||||||| || ||||||||||||||||
Sbjct: 980 ttctctcgcgctgaacgttcgtgaataccaaccatggtaactccaataggccatg 926
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>ref|XM_417229.1| PREDICTED: Gallus gallus similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18) (LOC419036), mRNA
          Length = 1628

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 896 cgtggatgccaaccatagtgacaccaatgggccacggcgcgttcccaatagcca 843
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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                        
Query: 311  gtctcgtcattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgc 370
            ||||| |||||||| || |||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 5676 gtctcatcattcatgatgtgagccacgctgtttgtgtagatcttttcgcgagccgatcgc 5735

                                                  
Query: 371  tcgtggataccaaccatagtgactccaataggccatgg 408
            || || ||||||||||| || || ||||| ||||||||
Sbjct: 5736 tcatgaataccaaccatggtcacaccaattggccatgg 5773



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 200  tcactcccatttgccaggctgttgaactc 228
            ||||| |||||||||||||||||||||||
Sbjct: 5565 tcactgccatttgccaggctgttgaactc 5593
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>emb|CR354060.1| Gallus gallus finished cDNA, clone ChEST370f14
          Length = 986

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 253 cgtggatgccaaccatagtgacaccaatgggccacggcgcgttcccaatagcca 200
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>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 170561

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 374   tggataccaaccatagtgactccaataggcca 405
             |||||||||||||||||||| |||||||||||
Sbjct: 16422 tggataccaaccatagtgacaccaataggcca 16453
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>gb|BC004573.1| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast),
           mRNA (cDNA clone MGC:8008 IMAGE:3586127), complete cds
          Length = 3431

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 971 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 920
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>ref|XM_584287.2| PREDICTED: Bos taurus similar to Pre-mRNA splicing factor 18 (PRP18
            homolog) (hPRP18) (LOC507639), mRNA
          Length = 1221

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            ||||| ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 1082 tggatgccaaccatagtaacaccaatgggccaaggggcgtttccaatggcca 1031
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>ref|XM_781064.1| PREDICTED: Strongylocentrotus purpuratus similar to PRP18 pre-mRNA
           processing factor 18 homolog (LOC581040), mRNA
          Length = 1041

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 350 atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 409
           |||||||||||| | | |||  |||| |||||||||||||| || ||||| ||||| || 
Sbjct: 893 atcttctctcgtcccgtacggacgtgaataccaaccatagtaacaccaatgggccaggga 834

                           
Query: 410 gcgttcccaatggcca 425
           || |||||||||||||
Sbjct: 833 gcattcccaatggcca 818
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>gb|BC058631.1| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast),
           mRNA (cDNA clone MGC:73420 IMAGE:6402639), complete cds
          Length = 3050

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 966 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 915
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>ref|NM_026045.3| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast)
           (Prpf18), mRNA
          Length = 3431

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 971 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 920
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>dbj|AK139720.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020013H18 product:Pre-mRNA splicing factor 18
           (PRP18 homolog), full insert sequence
          Length = 1574

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 959 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 908
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>dbj|AK135890.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420433J21 product:Pre-mRNA
           splicing factor 18 (PRP18 homolog), full insert sequence
          Length = 3041

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 992 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 941
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>dbj|AK135707.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420405F01 product:Pre-mRNA
            splicing factor 18 (PRP18 homolog), full insert sequence
          Length = 3056

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 1011 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 960
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>dbj|AK161550.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330405H01 product:Pre-mRNA
           splicing factor 18 (PRP18 homolog) (hPRP18) homolog
           [Homo sapiens], full insert sequence
          Length = 2957

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 415 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 364
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>gb|BC113323.1| Bos taurus cDNA clone MGC:137878 IMAGE:8082762, complete cds
          Length = 2397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           ||||| ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 983 tggatgccaaccatagtaacaccaatgggccaaggggcgtttccaatggcca 932
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>dbj|AK036668.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830147N24 product:POTASSIUM CHANNEL
            REGULATORY FACTOR homolog [Rattus norvegicus], full
            insert sequence
          Length = 3296

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 2624 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 2573
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>dbj|AK028921.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732470M16 product:hypothetical protein,
           full insert sequence
          Length = 2561

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 108 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 57
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>dbj|AK035073.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430083N14 product:HPRP18 (PRE-MRNA SPLICING FACTOR
            SIMILAR TO S. CEREVISIAE PRP18) homolog [Homo sapiens],
            full insert sequence
          Length = 1582

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 1001 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 950
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>emb|AL928550.20| Mouse DNA sequence from clone RP23-272I15 on chromosome 2, complete
            sequence
          Length = 99786

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 8222 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 8273
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>gb|BC028306.1| Mus musculus cDNA clone IMAGE:3496857, containing frame-shift
           errors
          Length = 3425

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 974 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 923
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>gb|AY118327.1| Drosophila melanogaster LD21120 full insert cDNA
          Length = 1304

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 905 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 852
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>ref|NM_142519.1| Drosophila melanogaster Prp18 CG6011-RA (Prp18), mRNA
          Length = 1284

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 908 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 855
to top
>gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, region 91E-91E, BAC clone
              BACR07D13, complete sequence
          Length = 153048

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 372    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 111786 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 111839
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>gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone
              BACR44N12, complete sequence
          Length = 204173

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 372    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 189194 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 189247
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>ref|NM_138523.1| Rattus norvegicus PRP18 pre-mRNA processing factor 18 homolog
           (yeast) (Pprf18), mRNA
          Length = 1845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           ||||||| || ||||||||||| ||||||||||| || || || ||||||||||
Sbjct: 967 cgtggatgccgaccatagtgacaccaataggccagggagcattgccaatggcca 914
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>gb|AF244920.1|AF244920 Rattus norvegicus potassium channel regulatory factor mRNA,
           complete cds
          Length = 1845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 372 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           ||||||| || ||||||||||| ||||||||||| || || || ||||||||||
Sbjct: 967 cgtggatgccgaccatagtgacaccaataggccagggagcattgccaatggcca 914
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>gb|AF170829.1|AF170829 Drosophila melanogaster putative protein NP15.6 (NP15.6) gene,
            complete cds; GatA protein (gatA) gene, partial cds; and
            pyrroline 5-carboxylate reductase (P5cr) and putative
            mRNA splicing factor (Prp18) genes, complete cds
          Length = 4290

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 372  cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 3080 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 3133
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>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete
              sequence
          Length = 232330

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 372    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 168287 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 168340
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>emb|AL034490.1|SPCC126 S.pombe chromosome III cosmid c126
          Length = 28324

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 377   ataccaaccatagtgactccaataggcca 405
             |||||||||||||| ||||||||||||||
Sbjct: 26484 ataccaaccatagtaactccaataggcca 26456
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>ref|NM_001023448.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC126.14),
           partial mRNA
          Length = 1032

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 377 ataccaaccatagtgactccaataggcca 405
           |||||||||||||| ||||||||||||||
Sbjct: 881 ataccaaccatagtaactccaataggcca 853
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>ref|NM_003675.3| Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S.
            cerevisiae) (PRPF18), mRNA
          Length = 1711

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 1014 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 963
to top
>ref|XM_852169.1| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 3
           (LOC477998), mRNA
          Length = 1159

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 996 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 945
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>ref|XM_852131.1| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 2
           (LOC477998), mRNA
          Length = 907

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 744 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 693
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>ref|XM_535182.2| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 1
           (LOC477998), mRNA
          Length = 1112

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 949 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 898
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>gb|BC000794.1| Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S.
           cerevisiae), mRNA (cDNA clone MGC:5075 IMAGE:3451639),
           complete cds
          Length = 1300

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 936 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 885
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>emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chromosome 10 Contains the
             PRPF18 gene for PRP18 pre-mRNA processing factor 18
             homolog (yeast), a ribosomal protein L6 (RPL6)(TAXREB107)
             pseudogene, two novel genes, the 5' end of a novel gene,
             the 3' end of the gene for a novel protein (FLJ10210) and
             two CpG islands, complete sequence
          Length = 178908

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 374   tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
             |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 42829 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 42778
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>emb|CR857737.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0135 (from clone DKFZp469P0135)
          Length = 1714

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 374  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
            |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 1008 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 957
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>emb|CR606297.1| full-length cDNA clone CL0BB016ZH02 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1481

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 938 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 887
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>gb|AF087997.1|HUMYX43G09 Homo sapiens full length insert cDNA clone YX43G09
          Length = 675

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 120 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 69
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>emb|CT485767.1| Xenopus tropicalis finished cDNA, clone TNeu108h19
          Length = 1218

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 374 tggataccaaccatagtgactccaataggcca 405
           |||||||||||||| ||||| |||||||||||
Sbjct: 882 tggataccaaccatggtgacaccaataggcca 851
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>gb|U51990.1|HSU51990 Human hPrp18 mRNA, complete cds
          Length = 1450

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 374 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 425
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 938 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 887
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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
            complete sequence
          Length = 123325

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 76/94 (80%)
 Strand = Plus / Plus

                                                                        
Query: 298  gtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaaatcttctc 357
            ||||||| |||| ||||| |||||||| |||||||| ||||| |  ||||  ||||| ||
Sbjct: 2599 gtacttgagagttgtctcatcattcatgatatgagcaacactataggtgttgatcttttc 2658

                                              
Query: 358  tcgtgcagaacgctcgtggataccaaccatagtg 391
             || ||||| |  || || |||||||||||||||
Sbjct: 2659 acgggcagatctttcatgaataccaaccatagtg 2692
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>gb|BC098551.1| Danio rerio zgc:110264, mRNA (cDNA clone MGC:110264 IMAGE:7398935),
           complete cds
          Length = 1453

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 ttggtccattgcttgcaaata 456
           |||||||||||||||||||||
Sbjct: 97  ttggtccattgcttgcaaata 77
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>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   agcctttcctcagaaggacct 160
             |||||||||||||||||||||
Sbjct: 66514 agcctttcctcagaaggacct 66494
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    agcctttcctcagaaggacct 160
              |||||||||||||||||||||
Sbjct: 171986 agcctttcctcagaaggacct 171966
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>ref|NM_001033590.1| Danio rerio zgc:110264 (zgc:110264), mRNA
          Length = 1453

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 ttggtccattgcttgcaaata 456
           |||||||||||||||||||||
Sbjct: 97  ttggtccattgcttgcaaata 77
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>gb|BC090228.1| Xenopus laevis cDNA clone MGC:85069 IMAGE:6327417, complete cds
          Length = 1257

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 374 tggataccaaccatagtgactccaataggccatggggcgtt 414
           ||||||||||||||||| || || |||||||| || |||||
Sbjct: 913 tggataccaaccatagtcacaccgataggccaaggagcgtt 873
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>ref|XM_518782.1| PREDICTED: Pan troglodytes utrophin (LOC463046), mRNA
          Length = 9811

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 ttcctcagaaggaccttttg 164
           ||||||||||||||||||||
Sbjct: 713 ttcctcagaaggaccttttg 732
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>ref|XM_360307.1| Magnaporthe grisea 70-15 hypothetical protein (MG05681.4) partial
           mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 368 cgctcgtggataccaaccatagtgactccaataggccatg 407
           |||||||||||||| ||||| || || ||||| |||||||
Sbjct: 935 cgctcgtggatacccaccatggtaacaccaatcggccatg 896
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>ref|XM_364404.1| Magnaporthe grisea 70-15 hypothetical protein (MG09249.4) partial
           mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 509 tcaggaagaaccttcttcct 528
           ||||||||||||||||||||
Sbjct: 124 tcaggaagaaccttcttcct 143
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>gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence
          Length = 163604

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    ttgtggttgaagcatcactctttt 121
             |||||||||||||||| |||||||
Sbjct: 33911 ttgtggttgaagcatccctctttt 33888
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>emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chromosome 6 Contains part
             of the UTRN gene for utrophin (homologous to dystrophin)
             (DRP, DRP1, DMDL). Contains two CpG islands, complete
             sequence
          Length = 129479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   ttcctcagaaggaccttttg 164
             ||||||||||||||||||||
Sbjct: 40816 ttcctcagaaggaccttttg 40835
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>emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in linkage group 15,
             complete sequence
          Length = 182283

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   cccaatggccagcttgatgt 434
             ||||||||||||||||||||
Sbjct: 60125 cccaatggccagcttgatgt 60106
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>dbj|AB228140.1| Aspergillus oryzae cDNA, contig sequence: AoEST5013
          Length = 513

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 352 cttctctcgtgcagaacgctcgtggataccaaccat 387
           ||||||||| || || || |||||||||||||||||
Sbjct: 305 cttctctcgagctgatcgttcgtggataccaaccat 270
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 352     cttctctcgtgcagaacgctcgtggataccaaccat 387
               ||||||||| || || || |||||||||||||||||
Sbjct: 2611768 cttctctcgagctgatcgttcgtggataccaaccat 2611733
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>ref|NM_007124.1| Homo sapiens utrophin (homologous to dystrophin) (UTRN), mRNA
          Length = 10302

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  ttcctcagaaggaccttttg 164
            ||||||||||||||||||||
Sbjct: 1940 ttcctcagaaggaccttttg 1959
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>gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, complete sequence
          Length = 159272

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   gtcatcaggaagaaccttct 524
             ||||||||||||||||||||
Sbjct: 22388 gtcatcaggaagaaccttct 22407
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>gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   tttggagggcagagcaggat 254
             ||||||||||||||||||||
Sbjct: 97281 tttggagggcagagcaggat 97300
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>emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, complete sequence
          Length = 166576

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    cccaatggccagcttgatgt 434
              ||||||||||||||||||||
Sbjct: 119490 cccaatggccagcttgatgt 119509
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>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence
          Length = 40146

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  tgtcggatccttctcctccg 182
            ||||||||||||||||||||
Sbjct: 9743 tgtcggatccttctcctccg 9762
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>emb|X69086.1|HSMUPS H.sapiens mRNA for utrophin
          Length = 10302

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  ttcctcagaaggaccttttg 164
            ||||||||||||||||||||
Sbjct: 1940 ttcctcagaaggaccttttg 1959


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,460,951
Number of Sequences: 3902068
Number of extensions: 4460951
Number of successful extensions: 71766
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71594
Number of HSP's gapped (non-prelim): 169
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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