ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13m15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478781.1| Oryza sativa (japonica cultivar-group), mRNA 654 0.0
2dbj|AK101604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 654 0.0
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 523 e-145
4dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 523 e-145
5ref|NM_100196.2| Arabidopsis thaliana unknown protein AT1G03140 ... 163 9e-37
6gb|AY051020.1| Arabidopsis thaliana unknown protein (At1g03140) ... 163 9e-37
7gb|AF360230.1| Arabidopsis thaliana unknown protein (At1g03140) ... 163 9e-37
8gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 ... 163 9e-37
9ref|NM_104337.1| Arabidopsis thaliana unknown protein AT1G54590 ... 100 1e-17
10gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis tha... 100 1e-17
11ref|XM_469417.1| Oryza sativa (japonica cultivar-group), mRNA 68 4e-08
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 68 4e-08
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 4e-08
14ref|XM_747974.1| Aspergillus fumigatus Af293 mRNA splicing facto... 68 4e-08
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
16dbj|AK120078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
17ref|XM_653144.1| Aspergillus nidulans FGSC A4 hypothetical prote... 62 3e-06
18ref|XM_417229.1| PREDICTED: Gallus gallus similar to Pre-mRNA sp... 60 1e-05
19gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 60 1e-05
20emb|CR354060.1| Gallus gallus finished cDNA, clone ChEST370f14 60 1e-05
21gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cance... 56 2e-04
22gb|BC004573.1| Mus musculus PRP18 pre-mRNA processing factor 18 ... 56 2e-04
23ref|XM_584287.2| PREDICTED: Bos taurus similar to Pre-mRNA splic... 56 2e-04
24ref|XM_781064.1| PREDICTED: Strongylocentrotus purpuratus simila... 56 2e-04
25gb|BC058631.1| Mus musculus PRP18 pre-mRNA processing factor 18 ... 56 2e-04
26ref|NM_026045.3| Mus musculus PRP18 pre-mRNA processing factor 1... 56 2e-04
27dbj|AK139720.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 56 2e-04
28dbj|AK135890.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 56 2e-04
29dbj|AK135707.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 56 2e-04
30dbj|AK161550.1| Mus musculus adult male pituitary gland cDNA, RI... 56 2e-04
31gb|BC113323.1| Bos taurus cDNA clone MGC:137878 IMAGE:8082762, c... 56 2e-04
32dbj|AK036668.1| Mus musculus adult male bone cDNA, RIKEN full-le... 56 2e-04
33dbj|AK028921.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 56 2e-04
34dbj|AK035073.1| Mus musculus 12 days embryo embryonic body betwe... 56 2e-04
35emb|AL928550.20| Mouse DNA sequence from clone RP23-272I15 on ch... 56 2e-04
36gb|BC028306.1| Mus musculus cDNA clone IMAGE:3496857, containing... 56 2e-04
37gb|AY118327.1| Drosophila melanogaster LD21120 full insert cDNA 52 0.002
38ref|NM_142519.1| Drosophila melanogaster Prp18 CG6011-RA (Prp18)... 52 0.002
39gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, r... 52 0.002
40gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, r... 52 0.002
41ref|NM_138523.1| Rattus norvegicus PRP18 pre-mRNA processing fac... 52 0.002
42gb|AF244920.1|AF244920 Rattus norvegicus potassium channel regul... 52 0.002
43gb|AF170829.1|AF170829 Drosophila melanogaster putative protein ... 52 0.002
44gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62... 52 0.002
45emb|AL034490.1|SPCC126 S.pombe chromosome III cosmid c126 50 0.010
46ref|NM_001023448.1| Schizosaccharomyces pombe 972h- hypothetical... 50 0.010
47ref|NM_003675.3| Homo sapiens PRP18 pre-mRNA processing factor 1... 48 0.038
48ref|XM_852169.1| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.038
49ref|XM_852131.1| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.038
50ref|XM_535182.2| PREDICTED: Canis familiaris similar to Pre-mRNA... 48 0.038
51gb|BC000794.1| Homo sapiens PRP18 pre-mRNA processing factor 18 ... 48 0.038
52emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chr... 48 0.038
53emb|CR857737.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0135 (from cl... 48 0.038
54emb|CR606297.1| full-length cDNA clone CL0BB016ZH02 of Neuroblas... 48 0.038
55gb|AF087997.1|HUMYX43G09 Homo sapiens full length insert cDNA cl... 48 0.038
56emb|CT485767.1| Xenopus tropicalis finished cDNA, clone TNeu108h19 48 0.038
57gb|U51990.1|HSU51990 Human hPrp18 mRNA, complete cds 48 0.038
58gb|DQ294293.1| Pseudomonas aeruginosa 1082 16S ribosomal RNA gen... 46 0.15
59ref|XM_747281.1| Aspergillus fumigatus Af293 C2H2 transcription ... 44 0.60
60dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.60
61emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on ch... 44 0.60
62gb|BC098551.1| Danio rerio zgc:110264, mRNA (cDNA clone MGC:1102... 42 2.4
63gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 42 2.4
64gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 42 2.4
65ref|NM_001033590.1| Danio rerio zgc:110264 (zgc:110264), mRNA 42 2.4
66gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome... 42 2.4
67gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete seq... 42 2.4
68emb|CR406857.1| Gallus gallus finished cDNA, clone ChEST931g13 42 2.4
69gb|BC090228.1| Xenopus laevis cDNA clone MGC:85069 IMAGE:6327417... 42 2.4
70ref|XM_512426.1| PREDICTED: Pan troglodytes similar to neuronal ... 40 9.3
71ref|XM_518782.1| PREDICTED: Pan troglodytes utrophin (LOC463046)... 40 9.3
72ref|XM_360307.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.3
73ref|XM_364404.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.3
74gb|AY190943.1| Drosophila virilis clone DVIF01_25_B23 (D1415) ge... 40 9.3
75gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence 40 9.3
76gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete se... 40 9.3
77gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete se... 40 9.3
78emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chr... 40 9.3
79emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in... 40 9.3
80gb|U93082.1|SIU93082 Sulfolobus islandicus plasmid pRN2, complet... 40 9.3
81gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map... 40 9.3
82dbj|AB228140.1| Aspergillus oryzae cDNA, contig sequence: AoEST5013 40 9.3
83dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 9.3
84ref|NM_007124.1| Homo sapiens utrophin (homologous to dystrophin... 40 9.3
85gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, com... 40 9.3
86gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, comple... 40 9.3
87emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, c... 40 9.3
88emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, comple... 40 9.3
89emb|X69086.1|HSMUPS H.sapiens mRNA for utrophin 40 9.3 
>ref|XM_478781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1607

 Score =  654 bits (330), Expect = 0.0
 Identities = 526/590 (89%), Gaps = 1/590 (0%)
 Strand = Plus / Minus

                                                                        
Query: 95   ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 153
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 154  ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 213
            | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                                                        
Query: 214  agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 273
             ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 1295

                                                                        
Query: 274  gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 333
            | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1294 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 1235

                                                                        
Query: 334  cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 393
            | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 1234 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 1175

                                                                        
Query: 394  taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 453
            |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1174 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 1115

                                                                        
Query: 454  ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 513
            |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 1114 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 1055

                                                                        
Query: 514  tacggatgtcatcaggaagaaccttcttcctgcagaactcaaacagtggactgagatacc 573
             ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 1054 gacggatgtcatcaggaagaacctgcttcctgcaaaactcaaacagggggctgagatacc 995

                                                                        
Query: 574  gcgcacactgcttgaacgttgcaaacatggacttcccctttgccgtccgcttctccagct 633
            ||||||| |||||||| ||||| | ||| ||||| |||||||| |||| |||||||||||
Sbjct: 994  gcgcacattgcttgaaggttgcgaccatcgacttgccctttgctgtcctcttctccagct 935

                                                              
Query: 634  ctgtcatatcatccagctcctggttccactcattgagcaacctcttgaag 683
            | | ||| ||||| |||||||||||||||||| |||| | | ||||||||
Sbjct: 934  ccggcatctcatcaagctcctggttccactcaatgagtagcttcttgaag 885
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>dbj|AK101604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L15, full
            insert sequence
          Length = 1608

 Score =  654 bits (330), Expect = 0.0
 Identities = 526/590 (89%), Gaps = 1/590 (0%)
 Strand = Plus / Minus

                                                                        
Query: 95   ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 153
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 1474 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 1415

                                                                        
Query: 154  ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 213
            | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 1414 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 1355

                                                                        
Query: 214  agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 273
             ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 1354 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 1295

                                                                        
Query: 274  gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 333
            | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1294 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 1235

                                                                        
Query: 334  cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 393
            | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 1234 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 1175

                                                                        
Query: 394  taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 453
            |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1174 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 1115

                                                                        
Query: 454  ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 513
            |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 1114 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 1055

                                                                        
Query: 514  tacggatgtcatcaggaagaaccttcttcctgcagaactcaaacagtggactgagatacc 573
             ||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||
Sbjct: 1054 gacggatgtcatcaggaagaacctgcttcctgcaaaactcaaacagggggctgagatacc 995

                                                                        
Query: 574  gcgcacactgcttgaacgttgcaaacatggacttcccctttgccgtccgcttctccagct 633
            ||||||| |||||||| ||||| | ||| ||||| |||||||| |||| |||||||||||
Sbjct: 994  gcgcacattgcttgaaggttgcgaccatcgacttgccctttgctgtcctcttctccagct 935

                                                              
Query: 634  ctgtcatatcatccagctcctggttccactcattgagcaacctcttgaag 683
            | | ||| ||||| |||||||||||||||||| |||| | | ||||||||
Sbjct: 934  ccggcatctcatcaagctcctggttccactcaatgagtagcttcttgaag 885
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  523 bits (264), Expect = e-145
 Identities = 400/444 (90%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                            
Query: 95       ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 153
                |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 23034487 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 23034546

                                                                            
Query: 154      ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 213
                | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 23034547 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 23034606

                                                                            
Query: 214      agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 273
                 ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 23034607 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 23034666

                                                                            
Query: 274      gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 333
                | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 23034667 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 23034726

                                                                            
Query: 334      cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 393
                | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 23034727 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 23034786

                                                                            
Query: 394      taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 453
                |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 23034787 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 23034846

                                                                            
Query: 454      ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 513
                |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 23034847 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 23034906

                                        
Query: 514      tacggatgtcatcaggaagaacct 537
                 |||||||||||||||||||||||
Sbjct: 23034907 gacggatgtcatcaggaagaacct 23034930



 Score =  139 bits (70), Expect = 1e-29
 Identities = 130/150 (86%)
 Strand = Plus / Plus

                                                                            
Query: 534      accttcttcctgcagaactcaaacagtggactgagataccgcgcacactgcttgaacgtt 593
                |||| ||||||||| ||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 23036171 acctgcttcctgcaaaactcaaacagggggctgagataccgcgcacattgcttgaaggtt 23036230

                                                                            
Query: 594      gcaaacatggacttcccctttgccgtccgcttctccagctctgtcatatcatccagctcc 653
                || | ||| ||||| |||||||| |||| |||||||||||| | ||| ||||| ||||||
Sbjct: 23036231 gcgaccatcgacttgccctttgctgtcctcttctccagctccggcatctcatcaagctcc 23036290

                                              
Query: 654      tggttccactcattgagcaacctcttgaag 683
                |||||||||||| |||| | | ||||||||
Sbjct: 23036291 tggttccactcaatgagtagcttcttgaag 23036320
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1121_A05
          Length = 172668

 Score =  523 bits (264), Expect = e-145
 Identities = 400/444 (90%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                          
Query: 95     ttctatttgtgatccaagcttgtg-gttgaagcatcactcttttgacgctggcatcagcc 153
              |||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct: 109701 ttctatttgtgatccaagcttgtgcgttgaagcatcactcttttgacgctggcatgagtc 109760

                                                                          
Query: 154    ggagcctttcctcagaaggaccttttgtcggatccttctcctccgatagaagggcctgca 213
              | ||||| |||||   ||||   |||   ||||| |||||||| || | |||||||||||
Sbjct: 109761 gaagcctatcctcgctaggagggtttcctggatctttctcctctgacaaaagggcctgca 109820

                                                                          
Query: 214    agtcactcccatttgccaggctgttgaactccactgatttggagggcagagcaggatagc 273
               ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
Sbjct: 109821 ggtcactcccatttgccaggctgttgaactccaccgattttgagggcagagcaggataac 109880

                                                                          
Query: 274    gccgctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgt 333
              | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 109881 gtcgctggcaaagggtcataagcctcttgattgactgaaggtacttgcgagtggtctcat 109940

                                                                          
Query: 334    cattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtgga 393
              | |||||||| || ||||||||||| ||||| ||||| ||||| || |||||||||||||
Sbjct: 109941 cgttcataatgtgcgccacactgtttgtgtagatcttttctcgggccgaacgctcgtgga 110000

                                                                          
Query: 394    taccaaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgtatt 453
              |||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||
Sbjct: 110001 taccaaccatagtgacaccaataggccatggtgcattgccaatggccagcttgatgtatt 110060

                                                                          
Query: 454    ggtccattgcttgcaaataatcacgcttcatgcagcagtccacaataaagagcaatgctt 513
              |||||||||||   ||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 110061 ggtccattgctgctaaataatcacgcttcatgcagcattcaacaataacgagcaatgctt 110120

                                      
Query: 514    tacggatgtcatcaggaagaacct 537
               |||||||||||||||||||||||
Sbjct: 110121 gacggatgtcatcaggaagaacct 110144



 Score =  139 bits (70), Expect = 1e-29
 Identities = 130/150 (86%)
 Strand = Plus / Plus

                                                                          
Query: 534    accttcttcctgcagaactcaaacagtggactgagataccgcgcacactgcttgaacgtt 593
              |||| ||||||||| ||||||||||| || ||||||||||||||||| |||||||| |||
Sbjct: 111385 acctgcttcctgcaaaactcaaacagggggctgagataccgcgcacattgcttgaaggtt 111444

                                                                          
Query: 594    gcaaacatggacttcccctttgccgtccgcttctccagctctgtcatatcatccagctcc 653
              || | ||| ||||| |||||||| |||| |||||||||||| | ||| ||||| ||||||
Sbjct: 111445 gcgaccatcgacttgccctttgctgtcctcttctccagctccggcatctcatcaagctcc 111504

                                            
Query: 654    tggttccactcattgagcaacctcttgaag 683
              |||||||||||| |||| | | ||||||||
Sbjct: 111505 tggttccactcaatgagtagcttcttgaag 111534
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>ref|NM_100196.2| Arabidopsis thaliana unknown protein AT1G03140 mRNA, complete cds
          Length = 1443

 Score =  163 bits (82), Expect = 9e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 306  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 365
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1153 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1094

                                                                        
Query: 366  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 425
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1093 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 1034

                                                  
Query: 426  gcgttcccaatggccagcttgatgtattggtccattgc 463
            |||||||| || || || |||||||| |||||||||||
Sbjct: 1033 gcgttcccgatagctagtttgatgtagtggtccattgc 996
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>gb|AY051020.1| Arabidopsis thaliana unknown protein (At1g03140) mRNA, complete cds
          Length = 1294

 Score =  163 bits (82), Expect = 9e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 306  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 365
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1073 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1014

                                                                        
Query: 366  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 425
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1013 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 954

                                                  
Query: 426  gcgttcccaatggccagcttgatgtattggtccattgc 463
            |||||||| || || || |||||||| |||||||||||
Sbjct: 953  gcgttcccgatagctagtttgatgtagtggtccattgc 916
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>gb|AF360230.1| Arabidopsis thaliana unknown protein (At1g03140) mRNA, complete cds
          Length = 1452

 Score =  163 bits (82), Expect = 9e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 306  gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 365
            |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 1153 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 1094

                                                                        
Query: 366  atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 425
            ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 1093 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 1034

                                                  
Query: 426  gcgttcccaatggccagcttgatgtattggtccattgc 463
            |||||||| || || || |||||||| |||||||||||
Sbjct: 1033 gcgttcccgatagctagtttgatgtagtggtccattgc 996
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>gb|AC006550.2|F10O3 Arabidopsis thaliana chromosome 1 BAC F10O3 sequence, complete sequence
          Length = 78341

 Score =  163 bits (82), Expect = 9e-37
 Identities = 139/158 (87%)
 Strand = Plus / Minus

                                                                         
Query: 306   gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaa 365
             |||||||| |||||||||||||| || || ||||| || ||||| |||||||| ||||||
Sbjct: 10838 gactgaagatacttgcgagtggtttcatcgttcatgatgtgagcaacactgttggtgtaa 10779

                                                                         
Query: 366   atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 425
             ||||||||||| || ||||| ||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 10778 atcttctctcgagctgaacgttcgtgaataccaaccatagtcactccaataggccatggc 10719

                                                   
Query: 426   gcgttcccaatggccagcttgatgtattggtccattgc 463
             |||||||| || || || |||||||| |||||||||||
Sbjct: 10718 gcgttcccgatagctagtttgatgtagtggtccattgc 10681
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>ref|NM_104337.1| Arabidopsis thaliana unknown protein AT1G54590 mRNA, complete cds
          Length = 771

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 127/152 (83%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                       
Query: 306 gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacact---gttcgtg 362
           |||||||| |||||||||||||| |||| |||||| || ||||| |||||   | | || 
Sbjct: 581 gactgaagatacttgcgagtggtttcgttattcatgatgtgagcaacactactgctagta 522

                                                                       
Query: 363 taaatcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccat 422
            ||||||||||||| |||||||| ||||| |||||||||||||| || || || ||||||
Sbjct: 521 gaaatcttctctcgggcagaacgttcgtgaataccaaccatagtcacaccgatgggccat 462

                                           
Query: 423 ggggcgttcccaatggccagcttgatgtattg 454
           || |||||||| ||||| || |||||| ||||
Sbjct: 461 ggtgcgttccctatggctagtttgatgaattg 430
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>gb|AC005388.1|T22H22 Sequence of BAC T22H22 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 87768

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 127/152 (83%), Gaps = 3/152 (1%)
 Strand = Plus / Plus

                                                                         
Query: 306   gactgaaggtacttgcgagtggtctcgtcattcataatatgagccacact---gttcgtg 362
             |||||||| |||||||||||||| |||| |||||| || ||||| |||||   | | || 
Sbjct: 20262 gactgaagatacttgcgagtggtttcgttattcatgatgtgagcaacactactgctagta 20321

                                                                         
Query: 363   taaatcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccat 422
              ||||||||||||| |||||||| ||||| |||||||||||||| || || || ||||||
Sbjct: 20322 gaaatcttctctcgggcagaacgttcgtgaataccaaccatagtcacaccgatgggccat 20381

                                             
Query: 423   ggggcgttcccaatggccagcttgatgtattg 454
             || |||||||| ||||| || |||||| ||||
Sbjct: 20382 ggtgcgttccctatggctagtttgatgaattg 20413
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>ref|XM_469417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1717

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 139/174 (79%)
 Strand = Plus / Minus

                                                                        
Query: 278  ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 337
            |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 1371 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 1312

                                                                        
Query: 338  cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 397
            ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 1311 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 1252

                                                                  
Query: 398  aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 451
             ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 1251 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 1198



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  gccaggctgttgaactccac 247
            ||||||||||||||||||||
Sbjct: 1421 gccaggctgttgaactccac 1402
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                         
Query: 278   ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 337
             |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 92133 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 92192

                                                                         
Query: 338   cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 397
             ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 92193 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 92252

                                                                   
Query: 398   aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 451
              ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 92253 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 92306



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   gccaggctgttgaactccac 247
             ||||||||||||||||||||
Sbjct: 92083 gccaggctgttgaactccac 92102
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                            
Query: 278      ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 337
                |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 27848003 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 27848062

                                                                            
Query: 338      cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 397
                ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 27848063 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 27848122

                                                                      
Query: 398      aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 451
                 ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 27848123 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 27848176



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 228      gccaggctgttgaactccac 247
                ||||||||||||||||||||
Sbjct: 27847953 gccaggctgttgaactccac 27847972
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>ref|XM_747974.1| Aspergillus fumigatus Af293 mRNA splicing factor Prp18 (Afu1g16990)
           partial mRNA
          Length = 1119

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                 
Query: 368 cttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggcca 421
           ||||||||| || || ||||||||||||||||||||||| || |||||||||||
Sbjct: 984 cttctctcgggctgatcgctcgtggataccaaccatagtcacaccaataggcca 931
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                            
Query: 278      ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 337
                |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 27939327 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 27939386

                                                                            
Query: 338      cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 397
                ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 27939387 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 27939446

                                                                      
Query: 398      aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 451
                 ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 27939447 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 27939500



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 228      gccaggctgttgaactccac 247
                ||||||||||||||||||||
Sbjct: 27939277 gccaggctgttgaactccac 27939296
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>dbj|AK120078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013011B03, full
            insert sequence
          Length = 2855

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 139/174 (79%)
 Strand = Plus / Minus

                                                                        
Query: 278  ctggcaaagggtcataagcctcttgatcgactgaaggtacttgcgagtggtctcgtcatt 337
            |||||| | |||||| |||||||| |  ||||| |||||||| |  || |||||||| ||
Sbjct: 2397 ctggcagaaggtcatcagcctcttcacggactgcaggtacttcctggtcgtctcgtcgtt 2338

                                                                        
Query: 338  cataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgctcgtggatacc 397
            ||| || || ||||| ||||| | ||| |||||||| || || || ||||||||||| ||
Sbjct: 2337 catgatgtgcgccacgctgttggcgtagatcttctcgcgcgccgagcgctcgtggatgcc 2278

                                                                  
Query: 398  aaccatagtgactccaataggccatggggcgttcccaatggccagcttgatgta 451
             ||||| ||||| || || ||||| || | ||| || ||||| |||||||||||
Sbjct: 2277 caccatcgtgacgccgatcggccacggcgagttgccgatggcgagcttgatgta 2224



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 228  gccaggctgttgaactccac 247
            ||||||||||||||||||||
Sbjct: 2447 gccaggctgttgaactccac 2428
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>ref|XM_653144.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0632.2), mRNA
          Length = 1116

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 369 ttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatg 423
           |||||||| || ||||| ||||| ||||||||||| || ||||||||||||||||
Sbjct: 980 ttctctcgcgctgaacgttcgtgaataccaaccatggtaactccaataggccatg 926
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>ref|XM_417229.1| PREDICTED: Gallus gallus similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18) (LOC419036), mRNA
          Length = 1628

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 896 cgtggatgccaaccatagtgacaccaatgggccacggcgcgttcccaatagcca 843
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>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                        
Query: 327  gtctcgtcattcataatatgagccacactgttcgtgtaaatcttctctcgtgcagaacgc 386
            ||||| |||||||| || |||||||| ||||| ||||| ||||| || || || || |||
Sbjct: 5676 gtctcatcattcatgatgtgagccacgctgtttgtgtagatcttttcgcgagccgatcgc 5735

                                                  
Query: 387  tcgtggataccaaccatagtgactccaataggccatgg 424
            || || ||||||||||| || || ||||| ||||||||
Sbjct: 5736 tcatgaataccaaccatggtcacaccaattggccatgg 5773



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 216  tcactcccatttgccaggctgttgaactc 244
            ||||| |||||||||||||||||||||||
Sbjct: 5565 tcactgccatttgccaggctgttgaactc 5593
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>emb|CR354060.1| Gallus gallus finished cDNA, clone ChEST370f14
          Length = 986

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           ||||||| |||||||||||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 253 cgtggatgccaaccatagtgacaccaatgggccacggcgcgttcccaatagcca 200
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>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 170561

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 390   tggataccaaccatagtgactccaataggcca 421
             |||||||||||||||||||| |||||||||||
Sbjct: 16422 tggataccaaccatagtgacaccaataggcca 16453
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>gb|BC004573.1| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast),
           mRNA (cDNA clone MGC:8008 IMAGE:3586127), complete cds
          Length = 3431

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 971 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 920
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>ref|XM_584287.2| PREDICTED: Bos taurus similar to Pre-mRNA splicing factor 18 (PRP18
            homolog) (hPRP18) (LOC507639), mRNA
          Length = 1221

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            ||||| ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 1082 tggatgccaaccatagtaacaccaatgggccaaggggcgtttccaatggcca 1031
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>ref|XM_781064.1| PREDICTED: Strongylocentrotus purpuratus similar to PRP18 pre-mRNA
           processing factor 18 homolog (LOC581040), mRNA
          Length = 1041

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 366 atcttctctcgtgcagaacgctcgtggataccaaccatagtgactccaataggccatggg 425
           |||||||||||| | | |||  |||| |||||||||||||| || ||||| ||||| || 
Sbjct: 893 atcttctctcgtcccgtacggacgtgaataccaaccatagtaacaccaatgggccaggga 834

                           
Query: 426 gcgttcccaatggcca 441
           || |||||||||||||
Sbjct: 833 gcattcccaatggcca 818
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>gb|BC058631.1| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast),
           mRNA (cDNA clone MGC:73420 IMAGE:6402639), complete cds
          Length = 3050

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 966 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 915
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>ref|NM_026045.3| Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast)
           (Prpf18), mRNA
          Length = 3431

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 971 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 920
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>dbj|AK139720.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020013H18 product:Pre-mRNA splicing factor 18
           (PRP18 homolog), full insert sequence
          Length = 1574

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 959 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 908
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>dbj|AK135890.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
           enriched library, clone:7420433J21 product:Pre-mRNA
           splicing factor 18 (PRP18 homolog), full insert sequence
          Length = 3041

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 992 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 941
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>dbj|AK135707.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420405F01 product:Pre-mRNA
            splicing factor 18 (PRP18 homolog), full insert sequence
          Length = 3056

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 1011 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 960
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>dbj|AK161550.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330405H01 product:Pre-mRNA
           splicing factor 18 (PRP18 homolog) (hPRP18) homolog
           [Homo sapiens], full insert sequence
          Length = 2957

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 415 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 364
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>gb|BC113323.1| Bos taurus cDNA clone MGC:137878 IMAGE:8082762, complete cds
          Length = 2397

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           ||||| ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 983 tggatgccaaccatagtaacaccaatgggccaaggggcgtttccaatggcca 932
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>dbj|AK036668.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830147N24 product:POTASSIUM CHANNEL
            REGULATORY FACTOR homolog [Rattus norvegicus], full
            insert sequence
          Length = 3296

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 2624 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 2573
to top
>dbj|AK028921.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732470M16 product:hypothetical protein,
           full insert sequence
          Length = 2561

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 108 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 57
to top
>dbj|AK035073.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430083N14 product:HPRP18 (PRE-MRNA SPLICING FACTOR
            SIMILAR TO S. CEREVISIAE PRP18) homolog [Homo sapiens],
            full insert sequence
          Length = 1582

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 1001 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 950
to top
>emb|AL928550.20| Mouse DNA sequence from clone RP23-272I15 on chromosome 2, complete
            sequence
          Length = 99786

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 8222 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 8273
to top
>gb|BC028306.1| Mus musculus cDNA clone IMAGE:3496857, containing frame-shift
           errors
          Length = 3425

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || |||||||| ||||| || ||||||||||
Sbjct: 974 tggataccaaccatggtgacaccgataggccagggggcattgccaatggcca 923
to top
>gb|AY118327.1| Drosophila melanogaster LD21120 full insert cDNA
          Length = 1304

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 905 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 852
to top
>ref|NM_142519.1| Drosophila melanogaster Prp18 CG6011-RA (Prp18), mRNA
          Length = 1284

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 908 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 855
to top
>gb|AC007891.8|AC007891 Drosophila melanogaster, chromosome 3R, region 91E-91E, BAC clone
              BACR07D13, complete sequence
          Length = 153048

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 388    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 111786 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 111839
to top
>gb|AC007814.6|AC007814 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone
              BACR44N12, complete sequence
          Length = 204173

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 388    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 189194 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 189247
to top
>ref|NM_138523.1| Rattus norvegicus PRP18 pre-mRNA processing factor 18 homolog
           (yeast) (Pprf18), mRNA
          Length = 1845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           ||||||| || ||||||||||| ||||||||||| || || || ||||||||||
Sbjct: 967 cgtggatgccgaccatagtgacaccaataggccagggagcattgccaatggcca 914
to top
>gb|AF244920.1|AF244920 Rattus norvegicus potassium channel regulatory factor mRNA,
           complete cds
          Length = 1845

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 388 cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           ||||||| || ||||||||||| ||||||||||| || || || ||||||||||
Sbjct: 967 cgtggatgccgaccatagtgacaccaataggccagggagcattgccaatggcca 914
to top
>gb|AF170829.1|AF170829 Drosophila melanogaster putative protein NP15.6 (NP15.6) gene,
            complete cds; GatA protein (gatA) gene, partial cds; and
            pyrroline 5-carboxylate reductase (P5cr) and putative
            mRNA splicing factor (Prp18) genes, complete cds
          Length = 4290

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 388  cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 3080 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 3133
to top
>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete
              sequence
          Length = 232330

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 388    cgtggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
              |||||||||| ||||||||||| ||||| ||||| || ||||| || |||||||
Sbjct: 168287 cgtggatacccaccatagtgacaccaatgggccaaggcgcgtttccgatggcca 168340
to top
>emb|AL034490.1|SPCC126 S.pombe chromosome III cosmid c126
          Length = 28324

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 393   ataccaaccatagtgactccaataggcca 421
             |||||||||||||| ||||||||||||||
Sbjct: 26484 ataccaaccatagtaactccaataggcca 26456
to top
>ref|NM_001023448.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC126.14),
           partial mRNA
          Length = 1032

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 393 ataccaaccatagtgactccaataggcca 421
           |||||||||||||| ||||||||||||||
Sbjct: 881 ataccaaccatagtaactccaataggcca 853
to top
>ref|NM_003675.3| Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S.
            cerevisiae) (PRPF18), mRNA
          Length = 1711

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 1014 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 963
to top
>ref|XM_852169.1| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 3
           (LOC477998), mRNA
          Length = 1159

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 996 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 945
to top
>ref|XM_852131.1| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 2
           (LOC477998), mRNA
          Length = 907

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 744 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 693
to top
>ref|XM_535182.2| PREDICTED: Canis familiaris similar to Pre-mRNA splicing factor 18
           (PRP18 homolog) (hPRP18), transcript variant 1
           (LOC477998), mRNA
          Length = 1112

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||| ||||| || || ||||| ||||| || ||||||||||
Sbjct: 949 tggataccaaccatggtgacacctatgggccaaggggcatttccaatggcca 898
to top
>gb|BC000794.1| Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S.
           cerevisiae), mRNA (cDNA clone MGC:5075 IMAGE:3451639),
           complete cds
          Length = 1300

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 936 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 885
to top
>emb|AL157392.18| Human DNA sequence from clone RP11-295P9 on chromosome 10 Contains the
             PRPF18 gene for PRP18 pre-mRNA processing factor 18
             homolog (yeast), a ribosomal protein L6 (RPL6)(TAXREB107)
             pseudogene, two novel genes, the 5' end of a novel gene,
             the 3' end of the gene for a novel protein (FLJ10210) and
             two CpG islands, complete sequence
          Length = 178908

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 390   tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
             |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 42829 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 42778
to top
>emb|CR857737.1| Pongo pygmaeus mRNA; cDNA DKFZp469P0135 (from clone DKFZp469P0135)
          Length = 1714

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 390  tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
            |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 1008 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 957
to top
>emb|CR606297.1| full-length cDNA clone CL0BB016ZH02 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1481

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 938 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 887
to top
>gb|AF087997.1|HUMYX43G09 Homo sapiens full length insert cDNA clone YX43G09
          Length = 675

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 120 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 69
to top
>emb|CT485767.1| Xenopus tropicalis finished cDNA, clone TNeu108h19
          Length = 1218

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 390 tggataccaaccatagtgactccaataggcca 421
           |||||||||||||| ||||| |||||||||||
Sbjct: 882 tggataccaaccatggtgacaccaataggcca 851
to top
>gb|U51990.1|HSU51990 Human hPrp18 mRNA, complete cds
          Length = 1450

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 390 tggataccaaccatagtgactccaataggccatggggcgttcccaatggcca 441
           |||||||||||||||||||| || || ||||| || || || ||||||||||
Sbjct: 938 tggataccaaccatagtgacaccgatgggccaaggcgcatttccaatggcca 887
to top
>gb|DQ294293.1| Pseudomonas aeruginosa 1082 16S ribosomal RNA gene, partial
           sequence
          Length = 810

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 621 cgcttctccagctctgtcatatcatcc 647
           |||||||||| ||||||||||||||||
Sbjct: 111 cgcttctccacctctgtcatatcatcc 85
to top
>ref|XM_747281.1| Aspergillus fumigatus Af293 C2H2 transcription factor (Afu1g10080)
            partial mRNA
          Length = 1713

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 592  ttgcaaacatggacttcccctt 613
            ||||||||||||||||||||||
Sbjct: 1082 ttgcaaacatggacttcccctt 1061
to top
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
            complete sequence
          Length = 123325

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 76/94 (80%)
 Strand = Plus / Plus

                                                                        
Query: 314  gtacttgcgagtggtctcgtcattcataatatgagccacactgttcgtgtaaatcttctc 373
            ||||||| |||| ||||| |||||||| |||||||| ||||| |  ||||  ||||| ||
Sbjct: 2599 gtacttgagagttgtctcatcattcatgatatgagcaacactataggtgttgatcttttc 2658

                                              
Query: 374  tcgtgcagaacgctcgtggataccaaccatagtg 407
             || ||||| |  || || |||||||||||||||
Sbjct: 2659 acgggcagatctttcatgaataccaaccatagtg 2692
to top
>emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on chromosome 2, complete
              sequence
          Length = 195301

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 617    cgtccgcttctccagctctgtc 638
              ||||||||||||||||||||||
Sbjct: 154395 cgtccgcttctccagctctgtc 154374
to top
>gb|BC098551.1| Danio rerio zgc:110264, mRNA (cDNA clone MGC:110264 IMAGE:7398935),
           complete cds
          Length = 1453

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 452 ttggtccattgcttgcaaata 472
           |||||||||||||||||||||
Sbjct: 97  ttggtccattgcttgcaaata 77
to top
>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   agcctttcctcagaaggacct 176
             |||||||||||||||||||||
Sbjct: 66514 agcctttcctcagaaggacct 66494
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 156    agcctttcctcagaaggacct 176
              |||||||||||||||||||||
Sbjct: 171986 agcctttcctcagaaggacct 171966
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>ref|NM_001033590.1| Danio rerio zgc:110264 (zgc:110264), mRNA
          Length = 1453

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 452 ttggtccattgcttgcaaata 472
           |||||||||||||||||||||
Sbjct: 97  ttggtccattgcttgcaaata 77
to top
>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence
          Length = 188476

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      atgattcttctgttgttctgc 27
              |||||||||||||||||||||
Sbjct: 173743 atgattcttctgttgttctgc 173763
to top
>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence
          Length = 127540

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     atatatgattcttctgttgtt 23
             |||||||||||||||||||||
Sbjct: 55577 atatatgattcttctgttgtt 55597
to top
>emb|CR406857.1| Gallus gallus finished cDNA, clone ChEST931g13
          Length = 1027

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 620 ccgcttctccagctctgtcat 640
           |||||||||||||||||||||
Sbjct: 150 ccgcttctccagctctgtcat 130
to top
>gb|BC090228.1| Xenopus laevis cDNA clone MGC:85069 IMAGE:6327417, complete cds
          Length = 1257

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 390 tggataccaaccatagtgactccaataggccatggggcgtt 430
           ||||||||||||||||| || || |||||||| || |||||
Sbjct: 913 tggataccaaccatagtcacaccgataggccaaggagcgtt 873
to top
>ref|XM_512426.1| PREDICTED: Pan troglodytes similar to neuronal calcium channel alpha
            1A subunit isoform 1A-2 (LOC455766), mRNA
          Length = 4623

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    tgattcttctgttgttctgc 27
            ||||||||||||||||||||
Sbjct: 2951 tgattcttctgttgttctgc 2932
to top
>ref|XM_518782.1| PREDICTED: Pan troglodytes utrophin (LOC463046), mRNA
          Length = 9811

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 ttcctcagaaggaccttttg 180
           ||||||||||||||||||||
Sbjct: 713 ttcctcagaaggaccttttg 732
to top
>ref|XM_360307.1| Magnaporthe grisea 70-15 hypothetical protein (MG05681.4) partial
           mRNA
          Length = 1083

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 384 cgctcgtggataccaaccatagtgactccaataggccatg 423
           |||||||||||||| ||||| || || ||||| |||||||
Sbjct: 935 cgctcgtggatacccaccatggtaacaccaatcggccatg 896
to top
>ref|XM_364404.1| Magnaporthe grisea 70-15 hypothetical protein (MG09249.4) partial
           mRNA
          Length = 2214

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 525 tcaggaagaaccttcttcct 544
           ||||||||||||||||||||
Sbjct: 124 tcaggaagaaccttcttcct 143
to top
>gb|AY190943.1| Drosophila virilis clone DVIF01_25_B23 (D1415) genomic sequence
          Length = 35983

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   ctttgccgtccgcttctcca 630
             ||||||||||||||||||||
Sbjct: 22421 ctttgccgtccgcttctcca 22440
to top
>gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence
          Length = 163604

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   ttgtggttgaagcatcactctttt 137
             |||||||||||||||| |||||||
Sbjct: 33911 ttgtggttgaagcatccctctttt 33888
to top
>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence
          Length = 130740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     atatatgattcttctgttgt 22
             ||||||||||||||||||||
Sbjct: 55915 atatatgattcttctgttgt 55934
to top
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      atatatgattcttctgttgt 22
              ||||||||||||||||||||
Sbjct: 108871 atatatgattcttctgttgt 108890
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>emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chromosome 6 Contains part
             of the UTRN gene for utrophin (homologous to dystrophin)
             (DRP, DRP1, DMDL). Contains two CpG islands, complete
             sequence
          Length = 129479

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   ttcctcagaaggaccttttg 180
             ||||||||||||||||||||
Sbjct: 40816 ttcctcagaaggaccttttg 40835
to top
>emb|CR853297.8| Zebrafish DNA sequence from clone DKEYP-118B3 in linkage group 15,
             complete sequence
          Length = 182283

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 431   cccaatggccagcttgatgt 450
             ||||||||||||||||||||
Sbjct: 60125 cccaatggccagcttgatgt 60106
to top
>gb|U93082.1|SIU93082 Sulfolobus islandicus plasmid pRN2, complete sequence
          Length = 6959

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 606  ttcccctttgccgtccgctt 625
            ||||||||||||||||||||
Sbjct: 2596 ttcccctttgccgtccgctt 2615
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>gb|AC016044.11| Homo sapiens chromosome 15 clone RP11-209K10 map 15q21.3, complete
             sequence
          Length = 168125

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 606   ttcccctttgccgtccgcttctccagctctgt 637
             ||||||| |||| || ||||||||||||||||
Sbjct: 43826 ttcccctgtgccttctgcttctccagctctgt 43795
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>dbj|AB228140.1| Aspergillus oryzae cDNA, contig sequence: AoEST5013
          Length = 513

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 368 cttctctcgtgcagaacgctcgtggataccaaccat 403
           ||||||||| || || || |||||||||||||||||
Sbjct: 305 cttctctcgagctgatcgttcgtggataccaaccat 270
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 368     cttctctcgtgcagaacgctcgtggataccaaccat 403
               ||||||||| || || || |||||||||||||||||
Sbjct: 2611768 cttctctcgagctgatcgttcgtggataccaaccat 2611733
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>ref|NM_007124.1| Homo sapiens utrophin (homologous to dystrophin) (UTRN), mRNA
          Length = 10302

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ttcctcagaaggaccttttg 180
            ||||||||||||||||||||
Sbjct: 1940 ttcctcagaaggaccttttg 1959
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>gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, complete sequence
          Length = 159272

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   gtcatcaggaagaaccttct 540
             ||||||||||||||||||||
Sbjct: 22388 gtcatcaggaagaaccttct 22407
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>gb|AC074096.8| Homo sapiens BAC clone RP11-328L16 from 2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   tttggagggcagagcaggat 270
             ||||||||||||||||||||
Sbjct: 97281 tttggagggcagagcaggat 97300
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>emb|BX005141.5| Zebrafish DNA sequence from clone CH211-13K16, complete sequence
          Length = 166576

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cccaatggccagcttgatgt 450
              ||||||||||||||||||||
Sbjct: 119490 cccaatggccagcttgatgt 119509
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>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence
          Length = 40146

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  tgtcggatccttctcctccg 198
            ||||||||||||||||||||
Sbjct: 9743 tgtcggatccttctcctccg 9762
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>emb|X69086.1|HSMUPS H.sapiens mRNA for utrophin
          Length = 10302

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ttcctcagaaggaccttttg 180
            ||||||||||||||||||||
Sbjct: 1940 ttcctcagaaggaccttttg 1959


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,626,649
Number of Sequences: 3902068
Number of extensions: 5626649
Number of successful extensions: 97129
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 96916
Number of HSP's gapped (non-prelim): 210
length of query: 683
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 660
effective length of database: 17,143,297,704
effective search space: 11314576484640
effective search space used: 11314576484640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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