ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13m14 |
|---|---|
| Clone Library Name | barley_pub |
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 59.3 bits (142), Expect = 1e-08 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 LP+A R++I+ +IL+ E+L+ ++L+ +AS +EGYSGSDLK LC AA +R+ + Sbjct: 262 LPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVRDYVRKQ 321 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVRPLNMSD----LKQAHEQVCASISSDSTNMNEL 378 S +RP+ D L + E A+ ++D N+ E+ Sbjct: 322 QMKQIAQQFQLDEEEEHVDSRQLRPVTQLDLLFGLDKMRESKQATATTDPANLREV 377
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 56.6 bits (135), Expect = 7e-08 Identities = 27/58 (46%), Positives = 40/58 (68%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDAT R +++ + LA+DVDLEA+A+ T GY G+D+ +LC AA + IRE +D Sbjct: 381 IPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMD 438 Score = 38.5 bits (88), Expect = 0.021 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD R I++ L K L ++L A+A T+G+SG+DL + AA I++ ++ Sbjct: 657 LPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIE 714
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/58 (48%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD T R +I+ + LA+DVDLE +A+ T GY GSDL +LC AA + IRE +D Sbjct: 391 IPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMD 448 Score = 42.4 bits (98), Expect = 0.001 Identities = 23/58 (39%), Positives = 33/58 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD R I+ L +AEDVDL AVA T G+SG+DL+ + A I++ ++ Sbjct: 666 LPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIE 723
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 55.8 bits (133), Expect = 1e-07 Identities = 23/55 (41%), Positives = 40/55 (72%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R +I ++ L K + ++++LE ++ LTEG+SG+D+KN+C+ AA+ IR+ Sbjct: 304 LPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRD 358
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/57 (47%), Positives = 37/57 (64%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 +PD RK+I+ + K LAEDVDLE +A LT G+ G+DL+ LC AA +R +L Sbjct: 349 VPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVL 405 Score = 47.8 bits (112), Expect = 3e-05 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 PD R +I + L + LA+DV++E +A TEGYSG+D++ +C A IRE++ Sbjct: 624 PDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELI 679
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 54.3 bits (129), Expect = 4e-07 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 LPD +RK +I++ L ++A DV++E VA TEGYSG DL N+C A+ +R + Sbjct: 412 LPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGK 471 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVR--PLNMSDLKQAHEQVCASISSDSTNMNELVQWNEL 360 S D+ P+ M D ++A +V S+SS +E +W Sbjct: 472 TRDEI----------KNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHE--KWLSE 519 Query: 359 YG 354 +G Sbjct: 520 FG 521
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 52.8 bits (125), Expect = 1e-06 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 +LPD +R I IL L EDVD+ +A TEG+SG+D+ NLC +A + I+E + Sbjct: 1101 SLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETI 1158 Score = 38.5 bits (88), Expect = 0.021 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +PD R +I+ K L DV+L +A GY G+DL LC AA + I+E Sbjct: 694 VPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKE 748
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 52.8 bits (125), Expect = 1e-06 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Frame = -2 Query: 713 LPDATNRKKIISVILAKE-DLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDX 537 LPD R + ++AK+ + +D+D E + +TEG+SGSDL +L AA PIR++ D Sbjct: 647 LPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDK 706 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELY 357 +R + + D + A + S+SS+S E +W+ + Sbjct: 707 LMFA---------------DFDKIRGIEIKDFQNALLTIKKSVSSESLQKYE--EWSSKF 749 Query: 356 GEGGS 342 G GS Sbjct: 750 GSNGS 754
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDAT R +I+ + LA+DVDLE VA+ T G+ G+DL LC AA + IR+ +D Sbjct: 370 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 427 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I+ L K +A+DVDLE +A +T G+SG+DL +C A IRE ++ Sbjct: 646 LPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDAT R +I+ + LA+DVDLE VA+ T G+ G+DL LC AA + IR+ +D Sbjct: 370 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 427 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I+ L K +A+DVDLE +A +T G+SG+DL +C A IRE ++ Sbjct: 646 LPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDAT R +I+ + LA+DVDLE VA+ T G+ G+DL LC AA + IR+ +D Sbjct: 370 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 427 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I+ L K +A+DVDLE +A +T G+SG+DL +C A IRE ++ Sbjct: 646 LPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDAT R +I+ + LA+DVDLE VA+ T G+ G+DL LC AA + IR+ +D Sbjct: 370 IPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 427 Score = 51.2 bits (121), Expect = 3e-06 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I+ L K +A+DVDLE +A +T G+SG+DL +C A IRE ++ Sbjct: 646 LPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 703
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 52.4 bits (124), Expect = 1e-06 Identities = 25/54 (46%), Positives = 35/54 (64%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LP R +I+ + K +A DVDLEA+A LTEG+SG+DLK + + A + IR Sbjct: 309 LPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIR 362
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 52.4 bits (124), Expect = 1e-06 Identities = 36/120 (30%), Positives = 57/120 (47%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 +PD RK+I+ + LAEDVDL+ +A +T G+ G+DL LC AA R +R +L Sbjct: 346 VPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSI 405 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYG 354 PK +++ + M D K+A + V S + V+W ++ G Sbjct: 406 DLEAEEI--------PKEVLDNLK-VTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGG 456 Score = 47.4 bits (111), Expect = 4e-05 Identities = 24/55 (43%), Positives = 34/55 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +PD R I + +LAEDV+LE +A TEGY+G+D++ LC AA +RE Sbjct: 620 VPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRE 674
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/99 (31%), Positives = 49/99 (49%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDX 537 N P R+ I+ +IL E++ VDL VA T+G+SGSDLK +C AA +RE ++ Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNS 317 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQV 420 + ++RP+ DL +A E++ Sbjct: 318 TS-------------EESHDEDEIRPVQQQDLHRAIEKM 343
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/99 (31%), Positives = 49/99 (49%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDX 537 N P R+ I+ +IL E++ VDL VA T+G+SGSDLK +C AA +RE ++ Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNS 317 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQV 420 + ++RP+ DL +A E++ Sbjct: 318 TS-------------EESHDEDEIRPVQQQDLHRAIEKM 343
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 52.0 bits (123), Expect = 2e-06 Identities = 31/99 (31%), Positives = 49/99 (49%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDX 537 N P R+ I+ +IL E++ VDL VA T+G+SGSDLK +C AA +RE ++ Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNS 317 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQV 420 + ++RP+ DL +A E++ Sbjct: 318 TS-------------EESHDEDEIRPVQQQDLHRAIEKM 343
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 51.6 bits (122), Expect = 2e-06 Identities = 25/57 (43%), Positives = 36/57 (63%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 PD R +I+ + K +LAEDV+LE +A +TEG G++LK +C A IRE+ D Sbjct: 341 PDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRD 397
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 50.8 bits (120), Expect = 4e-06 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD R +I + +LAEDVDL+ +A +TEG SG+D+K +C A IRE D Sbjct: 349 LPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRD 406
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 50.1 bits (118), Expect = 7e-06 Identities = 25/58 (43%), Positives = 38/58 (65%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD+T R +I+ + L++DVDLE VA+ T G+ G+DL LC AA + IR+ +D Sbjct: 371 IPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 428 Score = 49.3 bits (116), Expect = 1e-05 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I+ L K +A+DVD++ +A +T G+SG+DL +C A IRE ++ Sbjct: 647 LPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 49.7 bits (117), Expect = 9e-06 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R +I L K L++D+DL A+A T+G+SG+D+ +C A IRE ++ Sbjct: 651 LPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIE 708 Score = 48.1 bits (113), Expect = 3e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD R +++ + LAE+VDLE ++ T GY G+DL LC AA + IRE +D Sbjct: 375 VPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 432
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 49.3 bits (116), Expect = 1e-05 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I L K +A+DVD+ A+A T+G+SG+D+ +C A IRE ++ Sbjct: 651 LPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIE 708 Score = 48.9 bits (115), Expect = 2e-05 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD R +++ + LAEDVDLE ++ T GY G+DL LC AA + IRE +D Sbjct: 374 VPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 49.3 bits (116), Expect = 1e-05 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD R +++ + LAEDVDLE V+ T GY G+DL LC AA + IRE +D Sbjct: 375 VPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMD 432 Score = 48.9 bits (115), Expect = 2e-05 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R +I L K +A+DVDL A+A T+G+SG+D+ +C + IRE ++ Sbjct: 651 LPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIE 708
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 49.3 bits (116), Expect = 1e-05 Identities = 22/58 (37%), Positives = 39/58 (67%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP A R++++ + L + +LA+DVDL ++A EGYSG+D+ N+C A+ +R ++ Sbjct: 381 LPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIE 438
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 49.3 bits (116), Expect = 1e-05 Identities = 30/105 (28%), Positives = 51/105 (48%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDX 537 N P+ RK I+ +IL E++ V+L +A T+G+SGSDL+ +C AA +R+ + Sbjct: 262 NQPNVRQRKDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAALLCVRDFVHQ 321 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISS 402 +RP+ DL++A E++ S S+ Sbjct: 322 ESP----------------EEDFIRPIRQEDLQRAIEKMKKSKSA 350
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 48.9 bits (115), Expect = 2e-05 Identities = 25/58 (43%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDA R +I+ + L EDVDLE VA+ G+ G+DL +LC AA + IRE ++ Sbjct: 376 IPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433 Score = 45.1 bits (105), Expect = 2e-04 Identities = 23/58 (39%), Positives = 33/58 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R +I L K L+ D+DL +A T G+SG+DL +C A IRE ++ Sbjct: 652 LPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIE 709
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 48.9 bits (115), Expect = 2e-05 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R I L K +A+DVD+ A+A T+G+SG+D+ +C A IRE ++ Sbjct: 650 LPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIE 707 Score = 48.9 bits (115), Expect = 2e-05 Identities = 25/58 (43%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD R +++ + LAEDVDLE ++ T GY G+DL LC AA + IRE +D Sbjct: 374 VPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMD 431
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 48.9 bits (115), Expect = 2e-05 Identities = 24/58 (41%), Positives = 37/58 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PDA R +I+ + LA+DVDLE +A+ G+ G+DL +LC AA + IRE ++ Sbjct: 377 IPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKME 434 Score = 46.6 bits (109), Expect = 8e-05 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R +I+ L K L++D+DL +A T G+SG+DL +C A IRE ++ Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIE 711
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 LP A R++++ + L + +LA+DV++E +A +GYSG+D+ N+C A+ +R ++ Sbjct: 378 LPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGL 437 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVR-PLNMSDLKQAHEQVCASISSDSTNMNE 381 S D+ P M D + A ++V S+S+ E Sbjct: 438 TPEEIR----------NLSRDDMHMPTTMEDFEMALKKVSKSVSASDIEKYE 479
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/58 (39%), Positives = 36/58 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD +R +I L K +A++VDL A+A T+G+SG+D+ +C A IRE ++ Sbjct: 651 LPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIE 708 Score = 48.1 bits (113), Expect = 3e-05 Identities = 24/58 (41%), Positives = 35/58 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +PD R +++ + L++DVDLE +A T GY G+DL LC AA + IRE +D Sbjct: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 48.1 bits (113), Expect = 3e-05 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 2/107 (1%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAED-VDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +LP + R KI+SV+L L ED DL+ +A T+G+SGSDLK LC AA +E + Sbjct: 256 SLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIK 315 Query: 539 XXXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDL-KQAHEQVCASISS 402 SS +RPL D K+ +++SS Sbjct: 316 QKRQLIDSGTIDVNDT----SSLKIRPLKTKDFTKKLRMDATSTLSS 358
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 47.4 bits (111), Expect = 4e-05 Identities = 21/58 (36%), Positives = 39/58 (67%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP A R++++ + L + +LA+DV+L ++A EGYSG+D+ N+C A+ +R ++ Sbjct: 381 LPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIE 438
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 47.4 bits (111), Expect = 4e-05 Identities = 21/58 (36%), Positives = 39/58 (67%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP A R++++ + L + +LA+DV+L ++A EGYSG+D+ N+C A+ +R ++ Sbjct: 381 LPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIE 438
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 47.0 bits (110), Expect = 6e-05 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 PD R +I+SV+ K L D + +A LT G+ G+DL+++ A + I+ ILD Sbjct: 411 PDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRK 470 Query: 530 XXXXXXXXXXKP---LPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNEL 360 K +P + + MSD ++A V AS++ + ++ V+W+++ Sbjct: 471 SEQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDV 530 Query: 359 YG 354 G Sbjct: 531 GG 532 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 1/119 (0%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVA-SLTEGYSGSDLKNLCITAAHRPIREILDX 537 LP+A R I+ I K+ + VDL+ +A + EG+SG+DL +L A + + E++ Sbjct: 694 LPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGS 753 Query: 536 XXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNEL 360 + S DV + +K H + S+ S S N + ++ L Sbjct: 754 S----------------ESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDAL 796
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 47.0 bits (110), Expect = 6e-05 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 1/121 (0%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 LP A R +++ + L + +L DV LE +A TEGYSG+D+ N+C A+ +R ++ Sbjct: 378 LPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDASLMAMRRRINGL 437 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVR-PLNMSDLKQAHEQVCASISSDSTNMNELVQWNELY 357 S +++ P+ DL+ A +++ S+S + ++ + +W + Sbjct: 438 SPEEIRA----------LSKEELQMPVTRGDLELALKKIAKSVS--AADLEKYEKWMVEF 485 Query: 356 G 354 G Sbjct: 486 G 486
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 46.6 bits (109), Expect = 8e-05 Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 1/121 (0%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXX 534 LP A R +++ + L + +L D+ LE +A TEGYSG+D+ N+C A+ +R ++ Sbjct: 378 LPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGL 437 Query: 533 XXXXXXXXXXXKPLPPKYSSSDVR-PLNMSDLKQAHEQVCASISSDSTNMNELVQWNELY 357 S +++ P+ DL+ A +++ S+S + ++ + +W + Sbjct: 438 SPEEIRA----------LSKEELQMPVTRGDLELALKKIAKSVS--AADLEKYEKWMVEF 485 Query: 356 G 354 G Sbjct: 486 G 486
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 46.6 bits (109), Expect = 8e-05 Identities = 19/54 (35%), Positives = 37/54 (68%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LP+ R++++ + L + LA+D+DL+++A +GYSG+D+ N+C A+ +R Sbjct: 406 LPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDASMMAMR 459
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 46.6 bits (109), Expect = 8e-05 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R KI+ V + L +DVD E +A T GY+G+DL+NL I AA R ++EI Sbjct: 423 PDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEI 481
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 46.6 bits (109), Expect = 8e-05 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP+ R++I+ + + LAE+VD+E +A +T+G SG+DLK +C A IR+ D Sbjct: 321 LPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERD 378
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 46.2 bits (108), Expect = 1e-04 Identities = 25/54 (46%), Positives = 29/54 (53%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD R I+ V LA DVDL +A TEGY G+DL+NLC A RE Sbjct: 636 PDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRE 689
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLA-EDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +LP+ R ++ +L K+ +L +A +T+GYSGSDL L AA PIRE+ Sbjct: 507 SLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKP 566 Query: 539 XXXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNEL 360 S+S++R + +SD ++ +++ S+S + + ++WN+ Sbjct: 567 EQV--------------KNMSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKD 610 Query: 359 YGE 351 +G+ Sbjct: 611 FGD 613
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLA-EDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 +LP+ R ++ +L K+ +L +A +T+GYSGSDL L AA PIRE+ Sbjct: 505 SLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKP 564 Query: 539 XXXXXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNEL 360 S+S++R + +SD ++ +++ S+S + + ++WN+ Sbjct: 565 EQV--------------KNMSASEMRNIRLSDFTESLKKIKRSVSPQT--LEAYIRWNKD 608 Query: 359 YGE 351 +G+ Sbjct: 609 FGD 611
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 45.4 bits (106), Expect = 2e-04 Identities = 24/55 (43%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LP R +I + K LAEDVD + +A +TEG SG+D+K +C A IRE Sbjct: 311 LPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIRE 365
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/49 (48%), Positives = 31/49 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD RK+I+ V + K L+EDVD +A T G+SG+DL NL AA Sbjct: 321 LPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAA 369
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 45.1 bits (105), Expect = 2e-04 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R++I++V + L++DVDL+ +A T G++G+DL NL I AA R + EI Sbjct: 331 PDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEI 389
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 44.7 bits (104), Expect = 3e-04 Identities = 32/119 (26%), Positives = 55/119 (46%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 PD RK I+ V + +DVDL+ +A +T GY+G+DL L AA +R +D Sbjct: 380 PDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVD--- 436 Query: 530 XXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYG 354 +P P +++ ++M+D A + + S+ + V WN++ G Sbjct: 437 ---EKKLNLDQPTIPAEIIKELK-VSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGG 491 Score = 42.7 bits (99), Expect = 0.001 Identities = 24/55 (43%), Positives = 31/55 (56%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREI 546 PD T R +I+ V LAEDV LE +A EGY+G+DL+ L A +R I Sbjct: 656 PDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSI 710
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 44.7 bits (104), Expect = 3e-04 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R KI+ V + L +DVD + VA T G++G+DL+NL I AA R ++EI Sbjct: 432 PDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEI 490
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 44.7 bits (104), Expect = 3e-04 Identities = 23/48 (47%), Positives = 31/48 (64%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R +I+ V + LA+DVDLE VA T G++G+DL+NL AA Sbjct: 326 PDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAA 373
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 44.7 bits (104), Expect = 3e-04 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R KI+ V + LA+DVD + +A T G++G DL+NL I AA R ++EI Sbjct: 423 PDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEI 481
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 44.7 bits (104), Expect = 3e-04 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R +I+ V + LA+DVD + +A T G++G+DL+NL I AA R ++EI Sbjct: 400 PDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEI 458
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 44.7 bits (104), Expect = 3e-04 Identities = 23/49 (46%), Positives = 31/49 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + K +A+DVD +A T GYSG+DL NL AA Sbjct: 66 LPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 114
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 44.7 bits (104), Expect = 3e-04 Identities = 23/49 (46%), Positives = 31/49 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + K +A+DVD +A T GYSG+DL NL AA Sbjct: 320 LPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 368
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 43.9 bits (102), Expect = 5e-04 Identities = 21/47 (44%), Positives = 33/47 (70%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITA 570 PD +R +I++V+ LA+DVDL+ VAS+T+ ++G+DLK L A Sbjct: 1008 PDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 1054
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/50 (40%), Positives = 33/50 (66%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 N PD R++++ V + L +DV+L+ +A+ T G+SG+DL+NL AA Sbjct: 334 NRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAA 383
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 43.9 bits (102), Expect = 5e-04 Identities = 19/54 (35%), Positives = 35/54 (64%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD + +KKI+ + +K +L+EDV+LE + + + SG+D++ +C A +RE Sbjct: 353 PDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRE 406
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/54 (37%), Positives = 34/54 (62%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LP+ RK+I + L K ++ + +AS+TEG+SG+++KN+C A + IR Sbjct: 304 LPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIR 357
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 43.5 bits (101), Expect = 6e-04 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LP A R +++ + L + +L D+ LE +A EGYSG+D+ N+C A+ +R Sbjct: 380 LPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMR 433
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 43.5 bits (101), Expect = 6e-04 Identities = 23/53 (43%), Positives = 32/53 (60%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 PD R+ I+ + LA +VDL+AVA +T GYSG+DL N+ AA +R Sbjct: 310 PDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVR 362
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 43.1 bits (100), Expect = 8e-04 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R+ I+ V + LAEDVDL+ VA T G+ G+DL+N+ AA Sbjct: 357 PDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 43.1 bits (100), Expect = 8e-04 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R+ I+ V + LAEDVDL+ VA T G+ G+DL+N+ AA Sbjct: 357 PDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 43.1 bits (100), Expect = 8e-04 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ I S I AK +L+E+VDLE + + SG+D+ +C A +RE Sbjct: 332 LPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRE 386
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 43.1 bits (100), Expect = 8e-04 Identities = 20/45 (44%), Positives = 29/45 (64%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLC 579 +P+A R +I++VIL E + V+L +A EG SGSDLK +C Sbjct: 249 VPNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 43.1 bits (100), Expect = 8e-04 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNL----CITAAHRPIREI 546 PD R +I+ V + + +DVD E VA T G++G+DL+NL I AA R ++EI Sbjct: 420 PDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEI 478
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 42.7 bits (99), Expect = 0.001 Identities = 29/122 (23%), Positives = 52/122 (42%) Frame = -2 Query: 707 DATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXXX 528 D T + ++ ++ + D + + +TEGYSGSD+ +L AA P+R++ D Sbjct: 793 DQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGDKLL- 851 Query: 527 XXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYGEG 348 + +RP+ + D K + + S+S D E +W +G Sbjct: 852 --------------ETEREMIRPIGLVDFKNSLVYIKPSVSQDGLVKYE--KWASQFGSS 895 Query: 347 GS 342 GS Sbjct: 896 GS 897
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/55 (36%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R++I + +K LA+DV+LE + +SG+D+K +C A +RE Sbjct: 363 LPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRE 417
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/54 (37%), Positives = 35/54 (64%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD RKK+I + +++++ + +A+ TEG+SG+D+ +LC TAA +R Sbjct: 361 LPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R+ ++ V + LA DVDL VA+ T GY G+DL+N+ AA Sbjct: 364 PDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAA 411
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + + LA D+D +A T G+SG+DL NL AA Sbjct: 321 LPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + + LA D+D +A T G+SG+DL NL AA Sbjct: 321 LPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + + LA D+D +A T G+SG+DL NL AA Sbjct: 321 LPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 NLPD R I+ V + L EDV L +A+ T G+SG+DL NL AA Sbjct: 354 NLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAA 403
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + + LA D+D +A T G+SG+DL NL AA Sbjct: 321 LPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 42.0 bits (97), Expect = 0.002 Identities = 21/49 (42%), Positives = 30/49 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + + LA D+D +A T G+SG+DL NL AA Sbjct: 321 LPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R++I+ V + K L++DVD +A T G+SG+DL NL AA Sbjct: 321 LPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAA 369
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD + RK+I+ V + LA +V ++++A T G+SG+DL NL AA Sbjct: 342 PDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAA 389
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 +P R KI+ + K LAED+D + +A TEG SG+DLK + A +R Sbjct: 329 MPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVR 382
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/49 (46%), Positives = 29/49 (59%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 LPD R+KII V + K L +VD +A T G+SG+DL NL AA Sbjct: 321 LPDIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAA 369
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 41.2 bits (95), Expect = 0.003 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R +I+ V + LA DVDL+ +A LT G +G+DL N+ AA Sbjct: 348 PDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAA 395
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 40.8 bits (94), Expect = 0.004 Identities = 19/55 (34%), Positives = 33/55 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ I S I +K +L+E+VDLE + + SG+D+ ++C + +RE Sbjct: 335 LPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE 389
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 40.8 bits (94), Expect = 0.004 Identities = 19/55 (34%), Positives = 33/55 (60%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ I S I +K +L+E+VDLE + + SG+D+ ++C + +RE Sbjct: 335 LPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRE 389
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 40.8 bits (94), Expect = 0.004 Identities = 17/55 (30%), Positives = 34/55 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ + S + ++ +L++DVDLE + + SG+D+ ++C A + +RE Sbjct: 331 LPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRE 385
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP+ R +I+ + L K ++D EA+ LT+G +G+DL+N+ A I+E D Sbjct: 302 LPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRD 359
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 40.4 bits (93), Expect = 0.005 Identities = 19/55 (34%), Positives = 34/55 (61%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ I VI +K +L+++VDLE S + SG++++++C A IR+ Sbjct: 320 LPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRK 374
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 40.4 bits (93), Expect = 0.005 Identities = 19/55 (34%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ I S I +K +L+E+VDLE + + SG+D+ ++C +RE Sbjct: 335 LPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRE 389
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 40.0 bits (92), Expect = 0.007 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +P R KI+ + K LA D+D + +A +TEG SG+DLK + A +R+ Sbjct: 329 MPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRK 383
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 39.7 bits (91), Expect = 0.009 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 +LP+ R I+ V K+ + +DV LE +A T G+SG+DL NL AA +R Sbjct: 339 SLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVR 393
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 39.7 bits (91), Expect = 0.009 Identities = 27/97 (27%), Positives = 42/97 (43%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 P R++I+ + LA DV L +A +GY GSDL N+ AA +R+ D Sbjct: 631 PGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDDEDADD 690 Query: 530 XXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQV 420 + + +VRP DL + ++QV Sbjct: 691 VGMAHF---------RAAMENVRPTITDDLMEYYDQV 718 Score = 38.9 bits (89), Expect = 0.016 Identities = 19/57 (33%), Positives = 34/57 (59%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 +PD R++I+ + L++DV+L +A T G+ G+D+++L AA R +R L Sbjct: 356 VPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYL 412
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 39.7 bits (91), Expect = 0.009 Identities = 35/126 (27%), Positives = 50/126 (39%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 P+ +R KI+ + K +L VDL+A+A GY G+DL+ LC A Sbjct: 196 PNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREAT------------ 243 Query: 530 XXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYGE 351 + SSD L D K A V SI+ T V W+++ G Sbjct: 244 ------------ISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGL 291 Query: 350 GGSRKK 333 +KK Sbjct: 292 KDLKKK 297 Score = 35.8 bits (81), Expect = 0.13 Identities = 21/82 (25%), Positives = 36/82 (43%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 PD R +I+ V L +DVDL +A T+ ++G++L+ LC + +RE + Sbjct: 458 PDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATA 517 Query: 530 XXXXXXXXXXKPLPPKYSSSDV 465 L P + +V Sbjct: 518 VFNRHFQTAKSSLKPALTIEEV 539
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 39.7 bits (91), Expect = 0.009 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +++I ++ ++ LAEDV+L + + SG+D+K +C A +RE Sbjct: 354 LPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRE 408
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 39.7 bits (91), Expect = 0.009 Identities = 24/55 (43%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R +I+ V + L + VDL A+A +TEG SG+DLK + A IRE Sbjct: 310 LPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRE 363
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/54 (35%), Positives = 32/54 (59%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LP+ +R +I+ + K ++D EAV L++G+S +DL+N+C A IR Sbjct: 320 LPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIR 373
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/48 (39%), Positives = 30/48 (62%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R KI+ + K L ++V+L+ +A+ T G++G+DL NL AA Sbjct: 346 PDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAA 393
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 39.3 bits (90), Expect = 0.012 Identities = 22/55 (40%), Positives = 32/55 (58%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 ++PD +R I+ V ++ L V LEAVA T G++G+DL NL AA +R Sbjct: 322 SMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVR 376
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 39.3 bits (90), Expect = 0.012 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +K+I + ++ LA+DV L+ + + SG+D+K +C A +RE Sbjct: 355 LPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRE 409
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 39.3 bits (90), Expect = 0.012 Identities = 19/48 (39%), Positives = 30/48 (62%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R+ ++ V + L E V+L+++A T G+SG+DL+NL AA Sbjct: 331 PDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAA 378
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.016 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +K+I + ++ LA+DV L+ + + SG+D+K +C A +RE Sbjct: 355 LPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.016 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +K+I + ++ LA+DV L+ + + SG+D+K +C A +RE Sbjct: 355 LPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 38.9 bits (89), Expect = 0.016 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +K+I + ++ LA+DV L+ + + SG+D+K +C A +RE Sbjct: 355 LPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRE 409
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 38.9 bits (89), Expect = 0.016 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R +I+ V K +L + VDL +A +TEG SG+DLK + A IR+ Sbjct: 308 LPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRD 361
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 38.9 bits (89), Expect = 0.016 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R +I+ V + L ++VDL +A +TEG SG+DLK + A IRE Sbjct: 310 LPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRE 363
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 38.1 bits (87), Expect = 0.027 Identities = 24/55 (43%), Positives = 30/55 (54%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD R +I+ V + L VDL +A LTEG SG+DLK + A IRE Sbjct: 307 LPDFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRE 360
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 37.4 bits (85), Expect = 0.046 Identities = 18/58 (31%), Positives = 34/58 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LPD R++I+ + + L++++ + +A T GYSG+ L+N+ A+ +RE D Sbjct: 381 LPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTD 438
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 37.4 bits (85), Expect = 0.046 Identities = 19/57 (33%), Positives = 31/57 (54%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 +PD +R++I+ + K L + D +A LT G+ G+DL LC AA + +L Sbjct: 434 IPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 490
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 37.4 bits (85), Expect = 0.046 Identities = 19/50 (38%), Positives = 29/50 (58%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 ++PD R +I++V + L + LE +A T G+SG+DL NL AA Sbjct: 341 DVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAA 390
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 37.4 bits (85), Expect = 0.046 Identities = 19/54 (35%), Positives = 30/54 (55%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD R+ ++ V + +A+D DL+ +A T G +G+DL N+ AA RE Sbjct: 333 PDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARE 386
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 37.4 bits (85), Expect = 0.046 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R+ I+++ + L E+V L A+A T G++G+DL N+ AA Sbjct: 381 PDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAA 428
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 37.0 bits (84), Expect = 0.061 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 +LP+ R I+ + ++D EA+ L++G++G+DL+N+C A IR Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.061 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 +LP+ R I+ + ++D EA+ L++G++G+DL+N+C A IR Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.061 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 +LP+ R I+ + ++D EA+ L++G++G+DL+N+C A IR Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIR 356
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 36.6 bits (83), Expect = 0.079 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVD--LEAVASLTEGYSGSDLKNLCITA 570 +LPD R++I+ + +K + + + L+A+A T GY G+DLK LC A Sbjct: 562 SLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEA 612
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 36.6 bits (83), Expect = 0.079 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 NLPD R+ I+ V ++L+ + L VA T G+SG+ L+N+ A +R+ Sbjct: 399 NLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRD 454
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 36.6 bits (83), Expect = 0.079 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 9/58 (15%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKED---------LAEDVDLEAVASLTEGYSGSDLKNLCITA 570 N+P + R I+ I+ +D L ++ DL+ +A T G+SG+DL+ LC A Sbjct: 863 NIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNA 920
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 36.6 bits (83), Expect = 0.079 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 ++PD R +I+ + K +L + VDL VA + E G+DLK +C A IRE Sbjct: 317 SMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIRE 371
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 36.6 bits (83), Expect = 0.079 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 NLPD R+ I+ V ++L+ + L VA T G+SG+ L+N+ A +R+ Sbjct: 396 NLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRD 451
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 36.2 bits (82), Expect = 0.10 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 ++PD R I+ V + + V LE +A T G+SG+DL NL AA Sbjct: 341 DVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAA 390
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.10 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD R+ ++ V + +A D DL+ +A T G +G+DL N+ AA RE Sbjct: 333 PDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARE 386
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.10 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD R+ ++ V + +A D DL+ +A T G +G+DL N+ AA RE Sbjct: 333 PDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARE 386
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 36.2 bits (82), Expect = 0.10 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 LP+ R +I + AK + D EA +++G++G+D++N A IR+ D Sbjct: 351 LPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRD 408
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 36.2 bits (82), Expect = 0.10 Identities = 17/54 (31%), Positives = 31/54 (57%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 PD ++KI ++ +K +L EDV+LE + + SG+++K + A +RE Sbjct: 363 PDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRE 416
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 35.8 bits (81), Expect = 0.13 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 +PD R++I+ + K L E + +A LT G+ G+DL LC AA + +L Sbjct: 433 IPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 35.8 bits (81), Expect = 0.13 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAED-VDLEAVASLTEGYSGSDLKNLCITAAHRPIREILD 540 PD R +I+ K + E VDL +A TEGYSG+++ LC A I E LD Sbjct: 684 PDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLD 741
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 35.8 bits (81), Expect = 0.13 Identities = 16/55 (29%), Positives = 31/55 (56%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD +++I + ++ L ++V+LE + + SG+D+K +C A +RE Sbjct: 358 LPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRE 412
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 35.4 bits (80), Expect = 0.18 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 P A R +I+ + +L +DL+++A G SG++LK +C A +RE Sbjct: 317 PSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 34.7 bits (78), Expect = 0.30 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R +I+ L K + VD E +A T G+SG++L+NL AA Sbjct: 507 PDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAA 554
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 34.7 bits (78), Expect = 0.30 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVD-LEAVASLTEGYSGSDLKNLCITAA 567 LPD R KI+ + K + ++ +A LT+GY G+DL++LC AA Sbjct: 585 LPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAA 634
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 34.7 bits (78), Expect = 0.30 Identities = 17/58 (29%), Positives = 33/58 (56%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 ++PD +R I+ + ++++ V+L +VA G+SG+DL+ L A + + E L Sbjct: 965 DMPDFDDRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKL 1022 Score = 29.6 bits (65), Expect = 9.7 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDL--AEDVDLEAVASLTEGYSGSDLKNLCITAAHRPI-REIL 543 PD RK+I+ L ++ +E L +A TEGY DLK LC A H I R+IL Sbjct: 654 PDKEARKQILQSYLDTLNVFCSEGELLNNIAVETEGYLPKDLKVLCDRAYHDLISRDIL 712
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 34.3 bits (77), Expect = 0.39 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R +I+ L K + VD E +A T G+SG++L+NL AA Sbjct: 449 PDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAA 496
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 34.3 bits (77), Expect = 0.39 Identities = 19/48 (39%), Positives = 27/48 (56%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R +I+ L K + VD E +A T G+SG++L+NL AA Sbjct: 449 PDVKGRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAA 496
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 34.3 bits (77), Expect = 0.39 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 P R +I+ + K +L ++L VA G SG+D+K +C A +RE Sbjct: 319 PSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRE 372
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 34.3 bits (77), Expect = 0.39 Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDV-DLE-AVASLTEGYSGSDLKNLCITAA 567 P+ RK I +V L LA ++ DL+ +A+LT G+SG+D+ N+C AA Sbjct: 519 PELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAA 568
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 34.3 bits (77), Expect = 0.39 Identities = 16/55 (29%), Positives = 29/55 (52%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ + V AK +L ++VDLE S + S +++ +C A +R+ Sbjct: 330 LPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRK 384
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 33.9 bits (76), Expect = 0.51 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 4/54 (7%) Frame = -2 Query: 716 NLPDATNRKKIISV----ILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 +LPD R +I+ + + + L DVD+E +ASLT+ +SG+++ L +A+ Sbjct: 447 SLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSAS 500
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 33.5 bits (75), Expect = 0.67 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -2 Query: 710 PDATNRKKIISVILA--KEDLAEDVDLEA--VASLTEGYSGSDLKNLCITAAHRPIREIL 543 PD R I V L K D A + D A +ASLT G+SG+D+ N+C AA R + Sbjct: 477 PDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLS 536 Query: 542 D 540 D Sbjct: 537 D 537
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 33.5 bits (75), Expect = 0.67 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 P R ++++ L K ++D+E +A T GY+G+D++NL AA Sbjct: 334 PTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAA 381
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 33.5 bits (75), Expect = 0.67 Identities = 15/55 (27%), Positives = 30/55 (54%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LPD ++ + V +K +L+++VDLE S + S +++ +C A +R+ Sbjct: 325 LPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 379
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 33.1 bits (74), Expect = 0.87 Identities = 16/55 (29%), Positives = 32/55 (58%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 LP+ R I+ + K + +D++ E +A T+ Y+G+ LK++C+ A +R+ Sbjct: 355 LPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 33.1 bits (74), Expect = 0.87 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD ++ + + I +K L + VD+E++ E S +D+ ++C A +R Sbjct: 304 LPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVR 357
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 33.1 bits (74), Expect = 0.87 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Frame = -2 Query: 710 PDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREIL 543 PD R I V L L +D +ASLT G+SG+D+ N+C AA R + Sbjct: 478 PDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLS 537 Query: 542 D 540 D Sbjct: 538 D 538
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 32.7 bits (73), Expect = 1.1 Identities = 30/122 (24%), Positives = 49/122 (40%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 PD R++I+ V L K V +A T G+SG++L NL AA R Sbjct: 325 PDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAAR------- 377 Query: 530 XXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYGE 351 + ++M D+++A ++V ++ S M+E + Y E Sbjct: 378 -------------------LGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHE 418 Query: 350 GG 345 GG Sbjct: 419 GG 420
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDL--EAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +LP R++I L L + + +A LT G+SG+D+ N+C AA RE Sbjct: 478 DLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAARE 535
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 32.3 bits (72), Expect = 1.5 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -2 Query: 713 LPDATNRKKIISVILAK--EDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREI 546 LP+A R ++ + + K +L D + +A +T+GYSGSD+ + A P+R I Sbjct: 294 LPNAHARARMFELNVGKIPSELTSQ-DFKELAKMTDGYSGSDISIVVRDAIMEPVRRI 350
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 32.3 bits (72), Expect = 1.5 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 7/63 (11%) Frame = -2 Query: 713 LPDATNRKKIISV-------ILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPI 555 LPD R + + +L KED + ++TEGYSGSD+ + A +PI Sbjct: 298 LPDLAARTTMFEINVGDTPCVLTKEDY------RTLGAMTEGYSGSDIAVVVKDALMQPI 351 Query: 554 REI 546 R+I Sbjct: 352 RKI 354
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 32.3 bits (72), Expect = 1.5 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = -2 Query: 716 NLPDATNRKKIISVILAK-EDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 +LPD RK+I+ + D+ LE +A GY G+D+K++C AA Sbjct: 252 SLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAA 302
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Frame = -2 Query: 716 NLPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNL 582 +LPD T R +I+ + A+ + +VDLE ++ T+ +SG++L+ L Sbjct: 473 SLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGL 521
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 32.0 bits (71), Expect = 1.9 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCI-TAAHRPIRE 549 LPD RK ++ + L D ++ + LT SG D+K+ + TA HR I E Sbjct: 289 LPDDEERKLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALHRAIAE 344
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 31.6 bits (70), Expect = 2.5 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = -2 Query: 710 PDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNLCITAA 567 PD R I V L L++D +A+LT G++G+D+ N+C AA Sbjct: 344 PDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAA 395
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 31.6 bits (70), Expect = 2.5 Identities = 30/122 (24%), Positives = 48/122 (39%) Frame = -2 Query: 710 PDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREILDXXX 531 PD R++I+ V L K V +A T G+SG++L NL AA R Sbjct: 325 PDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAAR------- 377 Query: 530 XXXXXXXXXXKPLPPKYSSSDVRPLNMSDLKQAHEQVCASISSDSTNMNELVQWNELYGE 351 + ++M D+++A ++V + S M+E + Y E Sbjct: 378 -------------------LGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHE 418 Query: 350 GG 345 GG Sbjct: 419 GG 420
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAE-DVDLEAVASLTEGYSGSDLKNLCITAA 567 +LPD RK+I+ + + D LE +A GY G+D+K++C AA Sbjct: 597 SLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAA 647
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 31.2 bits (69), Expect = 3.3 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAE-DVDLEAVASLTEGYSGSDLKNLCITAA 567 +LPD RK+I+ + + D LE +A GY G+D+K++C AA Sbjct: 428 SLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAA 478
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Frame = -2 Query: 716 NLPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +LPD R +I + K +++DV+L +A+LT+ +SG++++ L +A+ I + Sbjct: 417 HLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINK 476 Query: 548 ILD 540 ++ Sbjct: 477 TVN 479
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 31.2 bits (69), Expect = 3.3 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD +R +I + + D+ E +A L +G+D++++C A IR Sbjct: 337 LPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 390
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 31.2 bits (69), Expect = 3.3 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCI-TAAHRPIREILD 540 LP+ R KI+ + K L +L+ T+G+SG D+K + A HR I E D Sbjct: 286 LPNDEERLKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIKEKFLKPALHRAILEDRD 344
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 31.2 bits (69), Expect = 3.3 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD +R +I + + D+ E +A L +G+D++++C A IR Sbjct: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 30.8 bits (68), Expect = 4.3 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD R +I + + D+ E +A L +G+D++++C A IR Sbjct: 338 LPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 30.8 bits (68), Expect = 4.3 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIR 552 LPD R +I + + D+ E +A L +G+D++++C A IR Sbjct: 338 LPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 30.4 bits (67), Expect = 5.7 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -2 Query: 716 NLPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREI 546 N+P+ +R I+ + + +D +A LT G+ G+DLK L A I+ I Sbjct: 376 NVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRI 432
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 30.0 bits (66), Expect = 7.4 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = -2 Query: 713 LPDATNRKKIISVILAK-EDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIREI 546 LP+A R + + L ++ + D + + T+GYSG+D+ + A +P+R++ Sbjct: 300 LPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKV 356
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 29.6 bits (65), Expect = 9.7 Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Frame = -2 Query: 716 NLPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNLCITAAHRPIRE 549 +LP+ R +I+++ + + +DVD + +A+LT+ +SG++L+ L A + Sbjct: 396 SLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNR 455 Query: 548 IL 543 ++ Sbjct: 456 LI 457
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%) Frame = -2 Query: 713 LPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNL 582 LPD R +I+ + A+ + L+ DVD++ +A T+ +SG++L+ L Sbjct: 397 LPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%) Frame = -2 Query: 713 LPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNL 582 LPD R +I+ + A+ + L+ DVD++ +A T+ +SG++L+ L Sbjct: 397 LPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%) Frame = -2 Query: 713 LPDATNRKKIISVILAK----EDLAEDVDLEAVASLTEGYSGSDLKNL 582 LPD R +I+ + A+ + L+ DVD++ +A T+ +SG++L+ L Sbjct: 397 LPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -2 Query: 713 LPDATNRKKIISVILAKEDLAEDVDLEAVASLTEGYSGSDLKNLCI-TAAHRPIRE 549 LP R+ ++ + L D ++ + LT+G SG D+K + TA HR + + Sbjct: 289 LPGDDERRMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTALHRALAD 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,614,162 Number of Sequences: 219361 Number of extensions: 1558918 Number of successful extensions: 3188 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 3107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3184 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7309604013 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
