ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14b13 |
|---|---|
| Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 84.3 bits (207), Expect = 3e-16 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Frame = -2 Query: 619 PIGCFPIYLTLYGTSNAGDYDGDGCLKSYNELSAHHNSLLRRSLANLQRTYPHTRIMYAD 440 PIGC + + + A D+D GC+ N L+ N L++++ L+ + I Y D Sbjct: 221 PIGCLAYVIERF-PNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVD 279 Query: 439 FYAQVIQMIRAPQNFGLKYGLKVCCGAGGQGKYNYNNKARCGMAG---------ASACSD 287 Y+ ++ Q G K L CCG GG KYNYN CGM C + Sbjct: 280 VYSLKHELFVHAQGHGFKGSLVSCCGHGG--KYNYNKGIGCGMKKIVKGKEVYIGKPCDE 337 Query: 286 PHNYLIWDGIHLTEAAYRSI 227 P ++WDG+H T+AA + I Sbjct: 338 PDKAVVWDGVHFTQAANKFI 357
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 84.0 bits (206), Expect = 4e-16 Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 11/156 (7%) Frame = -2 Query: 619 PIGCFPIYLTLYGTSNAGDYDGDGCLKSYNELSAHHNSLLRRSLANLQRTYPHTRIMYAD 440 PIGC LT + + + D GC K+YNE++ H N L+ +A L++ P ++ D Sbjct: 225 PIGCLSFILTYFPWA---EKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVD 281 Query: 439 FYAQVIQMIRAPQNFGLKYGLKVCCGAGGQGKYNYNNKARCG-----------MAGASAC 293 Y+ + P+ G ++ L CCG G GKYN++ A CG + G+ AC Sbjct: 282 IYSVKYSLFSEPEKHGFEFPLITCCGYG--GKYNFSVTAPCGDTVTADDGTKIVVGSCAC 339 Query: 292 SDPHNYLIWDGIHLTEAAYRSIANGWLKGPYCSPRI 185 P + WDG H TEAA + G + P + Sbjct: 340 --PSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPV 373
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 65.1 bits (157), Expect = 2e-10 Identities = 34/107 (31%), Positives = 52/107 (48%) Frame = -2 Query: 547 CLKSYNELSAHHNSLLRRSLANLQRTYPHTRIMYADFYAQVIQMIRAPQNFGLKYGLKVC 368 C + N S NS L L L +T P++ +Y D Y + QM+ P +G + K C Sbjct: 419 CNEELNYASQLFNSKLLLILGQLSKTLPNSTFVYMDIYTIISQMLETPAAYGFEETKKPC 478 Query: 367 CGAGGQGKYNYNNKARCGMAGASACSDPHNYLIWDGIHLTEAAYRSI 227 C G + A C + + C + +YL WDG+H T+ AY++I Sbjct: 479 CKTG-----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKTI 520
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 55.5 bits (132), Expect = 1e-07 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Frame = -2 Query: 640 IVVPGVLPIGCFPIYLTLYGTSNAGDYDGDGCLKSYNELSAHHNSLLRRSLANLQRTYPH 461 I V G PIGC P C + N + NS L L L +T P+ Sbjct: 314 IGVIGTPPIGCTPSQRVKKKKI---------CNEDLNYAAQLFNSKLVIILGQLSKTLPN 364 Query: 460 TRIMYADFYAQVIQMIRAPQNFGLKYGLKVCCGAG-GQGKYNYNNKARCGMAGASACSDP 284 + I+Y D Y+ +M+ +P+++G + K CC G +G + M+ AS Sbjct: 365 STIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNAS----- 419 Query: 283 HNYLIWDGIHLTEAAY 236 +YL WDG+H ++ AY Sbjct: 420 -SYLFWDGLHPSQRAY 434
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 33.5 bits (75), Expect = 0.55 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 289 DPHNYLIWDGIHLTEAAYRSIANGWLK 209 D + + WDG+HL+E Y IAN W K Sbjct: 109 DRNTDISWDGLHLSEIGYTKIANIWYK 135
>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Glycerophospholipid-cholesterol acyltransferase) (GCAT) Length = 335 Score = 33.5 bits (75), Expect = 0.55 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 29/136 (21%) Frame = -2 Query: 544 LKSYNELSAHHNSLLRRSLANLQRTY-PHTRIMYADFYAQVIQMIRAPQNFGLKYGLKVC 368 +++ + +SA+HN LL NL R P + + Q +M+R PQNFGL C Sbjct: 188 VEAASHVSAYHNQLL----LNLARQLAPTGMVKLFEIDKQFAEMLRDPQNFGLSDQRNAC 243 Query: 367 CGAGGQGK-------------YNYNNKARCGMAG----ASACSDP-----------HNYL 272 G K +N + R +AG A A + P + Sbjct: 244 YGGSYVWKPFASRSASTDSQLSAFNPQERLAIAGNPLLAQAVASPMAARSASTLNCEGKM 303 Query: 271 IWDGIHLTEAAYRSIA 224 WD +H T + +++ Sbjct: 304 FWDQVHPTTVVHAALS 319
>TRX_DROVI (Q24742) Protein trithorax| Length = 3828 Score = 33.5 bits (75), Expect = 0.55 Identities = 29/76 (38%), Positives = 36/76 (47%) Frame = -3 Query: 396 SASSMG*RCAAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMA 217 SASS+ AA A A TTTTT A + LT T TS+ T+S+ T S +A Sbjct: 235 SASSLSSSAAAAAAAAAPTTTTTTASA-----SATLTATATSTSTSSLP---GTPLSVIA 286 Query: 216 GSRALTAAPASCTDHP 169 G AA A +P Sbjct: 287 GGGGGAAAAALLLANP 302
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Frame = -3 Query: 348 ASTTTTTRQGAAWPGRAP------ALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPA 187 A TT+TT P P A T +TTS+ TAS + T PSP+ + + T+AP Sbjct: 47 APTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTTPSPVP-TTSTTSAPT 105 Query: 186 SCT 178 + T Sbjct: 106 TST 108 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = -3 Query: 348 ASTTTTTRQGAAWPGRA--PALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPASCTD 175 ++T+ +T + PG + P T +TTS+ T S + T PSP+ + +A S T Sbjct: 107 STTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTS 166 Query: 174 HP 169 P Sbjct: 167 GP 168 Score = 30.0 bits (66), Expect = 6.0 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -3 Query: 348 ASTTTTTRQGAAWPGRAP------ALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPA 187 AST +TT P P A T +TTS+ TAS + T+ SP+ + +A Sbjct: 79 ASTASTTSGPGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPTT 138 Query: 186 SCTDHP 169 S T P Sbjct: 139 STTSGP 144
>POXM_DROME (P23757) Paired box pox-meso protein (Paired box mesodermal| protein) Length = 402 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Frame = -2 Query: 517 HHNSLLRRSLANLQRTYPHTRIMYADFYAQVIQMIRAPQNFGLKYGLKVCCG-------A 359 HH+ + A+ + H A +A + I P + Y +K CG A Sbjct: 226 HHHHQSAAAAASAHHVHAH-----AHAHAHLYNSIYQPYSAAAAYSMKTPCGSPSPPQGA 280 Query: 358 GGQGKYNYNNKARCGMAGASACSDPHNYLIWD 263 GGQG + ++ R A A+A P ++ + D Sbjct: 281 GGQGSVPHPHQLRSVAAAAAAAHWPSSHSVSD 312
>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 526 Score = 32.0 bits (71), Expect = 1.6 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = -3 Query: 396 SASSMG*RCAAEPA--GRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSP 223 SA ++G A A G ++T+TTT A A TTT+ S+ P PS Sbjct: 252 SAGTLGFSLKAPGAAPGASTTSTTTTTTTTTTTAAAAAASTTTTGFALSLKPLVSAGPS- 310 Query: 222 MAGSRALTAAPASCT 178 S A TA PAS T Sbjct: 311 ---SVAATALPASST 322
>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6| Length = 737 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -3 Query: 366 AEPAGRASTTTTTRQGAAW--PGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAA 193 A P+ A +T+T+ Q P ++P T TTS T S + TAP P+ + + Sbjct: 652 ASPSTSAPSTSTSVQTKTTTSPTKSPTSTTITTSGTTTSATSSVATAPPPVLHAMRSAST 711 Query: 192 PAS 184 PA+ Sbjct: 712 PAT 714
>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)| Length = 1655 Score = 31.6 bits (70), Expect = 2.1 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Frame = -3 Query: 360 PAGRASTTTTTRQGAAWPGRAPALTR----------TTTSSGTASISPRRRTAPSPMAGS 211 PAG A + T Q AWP P L TT++ ++I+P ++ SP A Sbjct: 614 PAGCAVSALATSQVGAWPAETPGLNHPACSDSSLVIPTTTASRSAINPVSASSCSPGASD 673 Query: 210 RALTAA 193 L A Sbjct: 674 SLLVTA 679
>RS21_BARHE (Q6G512) 30S ribosomal protein S21| Length = 77 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 407 PSEFRPQVWAEGVLRSRRAGQVQLQQQGKVRHGRGERL 294 PSE R + AE V R+R+ + + Q++G + +GRG L Sbjct: 39 PSEKRAREKAEAVRRTRKLARKRAQREGLISNGRGSPL 76
>PKNF_MYCTU (P72003) Probable serine/threonine-protein kinase pknF (EC| 2.7.11.1) Length = 476 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = -3 Query: 297 PALTRTTTSSG-TASISPRRRTAPSP 223 PA TRTTTS+G T S++P T P+P Sbjct: 340 PARTRTTTSAGTTTSVAPASTTRPAP 365
>PKNF_MYCBO (Q7TZN1) Probable serine/threonine-protein kinase pknF (EC| 2.7.11.1) Length = 476 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = -3 Query: 297 PALTRTTTSSG-TASISPRRRTAPSP 223 PA TRTTTS+G T S++P T P+P Sbjct: 340 PARTRTTTSAGTTTSVAPASTTRPAP 365
>PER_DROYA (Q24767) Period circadian protein| Length = 1208 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 454 AGASFCSKPYRFLIQNGCYVLLETEWTSFVNPW 486
>CYB6_CHLLT (Q59297) Cytochrome bc complex cytochrome b subunit| Length = 427 Score = 31.2 bits (69), Expect = 2.7 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = -3 Query: 369 AAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSR 208 AA A + + R GAA P PA R SG P R P+P S+ Sbjct: 19 AAPGAAKPAAPKAARPGAAKPAAKPAAPRAAAPSGVYKKPPVDRPDPNPFKDSK 72
>PER_DROSE (Q03354) Period circadian protein (Fragments)| Length = 661 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 435 AGASFCSKPYRFLIQNGCYVLLETEWTSFVNPW 467
>PER_DROMA (Q03353) Period circadian protein (Fragments)| Length = 676 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 436 AGASFCSKPYRFLIQNGCYVLLETEWTSFVNPW 468
>PER_DROSI (Q03355) Period circadian protein (Fragments)| Length = 656 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 436 AGASFCSKPYRFLIQNGCYVLLETEWTSFVNPW 468
>PER_DROME (P07663) Period circadian protein (Clock-6 protein) (CLK-6)| Length = 1224 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 450 AGASFCSKPYRFLIQNGCYVLLETEWTSFVNPW 482
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G + L E + S N W Sbjct: 412 AGASFCSKPYRFLIQNGCYILLETEWSSFVNPW 444
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Frame = -3 Query: 363 EPAGRASTTTTTRQGAAWPG-RAPALTRTTTSSGTASISPR-----RRTAPSPMAGSR 208 +P GR + GA P R+P L +T+++ AS SPR RR +PSP +R Sbjct: 1210 QPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRESPSPSHQAR 1267
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 30.8 bits (68), Expect = 3.5 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Frame = -3 Query: 405 LRISASSMG*RCAAEPAGRASTTTTTRQGAAWP---GRAPALTRTTTSSGTASISPRRRT 235 L+ SAS+ G + +PA STT+ G+A G A A T+TT S ++S+ Sbjct: 987 LKASASTFGTPASTQPA-FGSTTSVFSFGSATTSGFGAAAATTQTTHSGSSSSLFGSSTP 1045 Query: 234 APSPMAGSRALTAAPA 187 +P GS AAPA Sbjct: 1046 SPFTFGGS----AAPA 1057
>VE2_HPV20 (P50766) Regulatory protein E2| Length = 497 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Frame = -3 Query: 390 SSMG*RCAAEPAGRASTTTTTRQG------AAWPGRAPALTRTTTSSGTASISPRRRTAP 229 ++ G R P+ R TT TRQ + R+ + +R + S + S SPRRR+ Sbjct: 240 NTKGRRYGRRPSSRTRRTTQTRQRRRSRSKSKSKSRSRSRSRHRSRSRSRSESPRRRSRY 299 Query: 228 SPMAGSRALTAAPASCT 178 +GSR A A T Sbjct: 300 RSRSGSRGRVALRAITT 316
>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) (Cav3.1c) (NBR13) Length = 2377 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/84 (27%), Positives = 31/84 (36%) Frame = -1 Query: 428 GHPDDPGPSEFRPQVWAEGVLRSRRAGQVQLQQQGKVRHGRGERLL*PAQLPHLGRHPSH 249 G + P P + + E RR +Q+ RH L PHLG PS+ Sbjct: 2233 GQEEPPSPRDLKKCYSVEAQSCQRRPTSWLDEQR---RHSIAVSCLDSGSQPHLGTDPSN 2289 Query: 248 RGGVPLHRQWLAQGPLLQPPHLAL 177 GG PL L PP + + Sbjct: 2290 LGGQPLGGPGSRPKKKLSPPSITI 2313
>HA34_BRELC (Q99074) HAM34 protein| Length = 173 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/64 (35%), Positives = 28/64 (43%) Frame = -3 Query: 369 AAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAP 190 A PA A+TTTTT AA G A T TT++G + T +P A AP Sbjct: 33 ATTPAA-ATTTTTTTTPAADAGTAS--TEQTTTAGPEAAGATNGTTTTPPADGTQTATAP 89 Query: 189 ASCT 178 T Sbjct: 90 LDAT 93
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 351 RASTTTTTRQGAAWPGR-APALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPASC 181 RA + GAAW R AP + T+ +G+ RTAP+P + +AA +SC Sbjct: 160 RAGACKPSCAGAAWSARGAPLCSYRTSCAGSCGA----RTAPTPAPTCASPSAAASSC 213
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = -3 Query: 360 PAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPASC 181 P +TTTTT+ P T TTT++ + +P T ++A T P + Sbjct: 433 PTTTTTTTTTTKATTTTP---TTTTPTTTTTKATTTTPTTTTTTPTTTTTKATTTTPTTT 489 Query: 180 TDHP 169 T P Sbjct: 490 TTTP 493
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Frame = -3 Query: 357 AGRASTTTTTRQGAA--------WPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRAL 202 + +ASTTT++ GA+ PG + + TT+SSG AS P + SP + S+A Sbjct: 73 SSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS-PPTTVQSQSPGSSSQAS 131 Query: 201 TAAPAS 184 T +S Sbjct: 132 TTTSSS 137 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Frame = -3 Query: 357 AGRASTTTTTRQGAA--------WPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRAL 202 + +ASTTT++ GA+ PG + + TT+SSG AS P + SP + S+A Sbjct: 46 SSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS-PPTTVQSQSPGSSSQAS 104 Query: 201 TAAPAS 184 T +S Sbjct: 105 TTTSSS 110
>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)| Length = 926 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 2/110 (1%) Frame = -3 Query: 492 ASPTSRGHXXXXXXXXXXXXXXXXXXXXPLRISASSMG*RCAAEPAGRASTTTTTRQGAA 313 A P + + ++A+ + A PA A+T + A Sbjct: 665 AGPVAAAAPAAAINATAATNTATAATNTTIMVAAAPVAVAAVAAPAAAAATPSPANAAAL 724 Query: 312 WPGRAPA--LTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPASCTDHP 169 APA ++ T+ S SISP AP+ + A +PA+ P Sbjct: 725 AAAAAPATSVSAATSVSAANSISPAAPVAPAAVV-PPAAPVSPAAAVQIP 773
>AMYG_ASPSH (P22832) Glucoamylase precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 639 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = -3 Query: 396 SASSMG*RCAAEPA-GRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPM 220 SASS+ CAA A G S+ T T +WP TTT++ T S + + Sbjct: 464 SASSVPGTCAATSASGTYSSVTVT----SWPSIVATGGTTTTATTTGSGGVTSTSKTTTT 519 Query: 219 AGSRALTAAPASCT 178 A + T + SCT Sbjct: 520 ASKTSTTTSSTSCT 533
>AMYG_ASPNG (P69328) Glucoamylase precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 640 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -3 Query: 396 SASSMG*RCAAEPA-GRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPM 220 SASS+ CAA A G S+ T T +WP TTT++ T S S + + Sbjct: 465 SASSVPGTCAATSAIGTYSSVTVT----SWPSIVATGGTTTTATPTGSGSVTSTSKTTAT 520 Query: 219 AGSRALTAAPASCT 178 A + + + SCT Sbjct: 521 ASKTSTSTSSTSCT 534
>AMYG_ASPAW (P69327) Glucoamylase precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 640 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = -3 Query: 396 SASSMG*RCAAEPA-GRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPM 220 SASS+ CAA A G S+ T T +WP TTT++ T S S + + Sbjct: 465 SASSVPGTCAATSAIGTYSSVTVT----SWPSIVATGGTTTTATPTGSGSVTSTSKTTAT 520 Query: 219 AGSRALTAAPASCT 178 A + + + SCT Sbjct: 521 ASKTSTSTSSTSCT 534
>BIOB_HAEIN (P44987) Biotin synthase (EC 2.8.1.6) (Biotin synthetase)| Length = 333 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Frame = -2 Query: 469 YPHTRIMYADFYAQVIQMIRAPQNFGL-----KYGLKVCCGAGGQGKYNYNNKARCGMAG 305 Y H + YA+VI R K GLKVCC GG N K R G+ Sbjct: 163 YNHNLDTAPEHYAEVIGTRRFDDRLSTLGKVRKAGLKVCC--GGIVGMNETRKERAGLIA 220 Query: 304 ASACSDP 284 + A DP Sbjct: 221 SLANLDP 227
>ALR2_YEAST (P43553) Magnesium transporter ALR2 (Aluminum resistance protein 2)| Length = 858 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -2 Query: 610 CFPIYLTLYGTSNAGDYDGDGCLKSYNELS-AHHNSLLRRSLANLQRTYPHT 458 CFP++ L+ N D+D L+ Y ++S A N L + +RTY HT Sbjct: 274 CFPMFRLLHTRVNGVDFDE---LEEYAQISNAERNLSLANHQRHSERTYNHT 322
>NHX6_ARATH (Q8RWU6) Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6)| (NHE-6) Length = 535 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -2 Query: 598 YLTLYGTSNAGDYDGDGCLKSYNE 527 YLT + TSN GDYD +G ++ ++E Sbjct: 497 YLTPFFTSNNGDYDDEGNMEQHHE 520
>CTTB2_MICMU (Q2QL82) Cortactin-binding protein 2 (CortBP2)| Length = 1647 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Frame = -3 Query: 360 PAGRASTTTTTRQGAAWPGRAPALTR----------TTTSSGTASISPRRRTAPSPMAGS 211 PAG A + T Q AWP P L + TT++ +SI+P ++ P A Sbjct: 609 PAGCAVSALATSQVGAWPAETPGLNQPACSDSSLVIPTTTAFRSSINPVSASSCRPGASD 668 Query: 210 RALTAA 193 L A Sbjct: 669 SLLVTA 674
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = -3 Query: 360 PAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAA 193 P +S+++ ++ A P + TR T + + + +P+P +G+ A TAA Sbjct: 201 PGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAA 256
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 30.0 bits (66), Expect = 6.0 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -3 Query: 345 STTTTTRQGAAWP-GRAPALTRTTTSSGTASISPRRRTA--PSPMAGSRALTAAPASCTD 175 +T TT + G W +A SSG++S S ++ A P P+ G R SC D Sbjct: 613 ATATTPKSGRKWKKSKAAKQGSGGGSSGSSSGSQQQGAAGAPQPVLGVRIADCPTGSCED 672 Query: 174 H 172 H Sbjct: 673 H 673
>PER_DROWI (Q03297) Period circadian protein (Fragment)| Length = 1093 Score = 30.0 bits (66), Expect = 6.0 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 310 AGASACSDPHNYLIWDGIH-LTEAAYRSIANGW 215 AGAS CS P+ +LI +G L E + S N W Sbjct: 362 AGASFCSKPYRFLIQNGCFVLLETEWTSFVNPW 394
>NG1_DROME (P23938) Protein new-glue 1 precursor (NG-1) (Salivary glue protein| homolog) Length = 107 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 372 CAAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASIS-PRRRTAPSPMAGSRALT 199 C ASTTTT+ +A + + T TT++S T + S T SP + S+ T Sbjct: 16 CVMIHESEASTTTTSTSASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKT 74
>NG2_DROME (P40139) Protein new-glue 2 precursor (NG-2)| Length = 112 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 372 CAAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASIS-PRRRTAPSPMAGSRALT 199 C ASTTTT+ +A + + T TT++S T + S T SP + S+ T Sbjct: 16 CVMIHESEASTTTTSTSASATTTTSASATTTTSASATTTTSASATTTTASPSSSSKKKT 74
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 3/109 (2%) Frame = -3 Query: 501 SGGASPTSRGHXXXXXXXXXXXXXXXXXXXXPLRISASSMG*RCAAEPAGRASTTTTTRQ 322 +G ++ T P SA++ P +T TTT Sbjct: 340 TGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPS 399 Query: 321 GAAWPGRAPALTR---TTTSSGTASISPRRRTAPSPMAGSRALTAAPAS 184 A +P T +TTS+ T + + T+P GS + TA P+S Sbjct: 400 EATTATTSPESTTVSASTTSATTTAFTTESHTSPDSSTGSTS-TAEPSS 447
>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 525 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/57 (38%), Positives = 26/57 (45%) Frame = -3 Query: 348 ASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAPASCT 178 ASTT+TT A + TTT+ S+ P PS S A TA PAS T Sbjct: 269 ASTTSTTTTTTTTTTTASTSSSTTTTGFALSLKPLVPAGPS----SVAATALPASST 321
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -3 Query: 360 PAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPMAGSRALTAAP 190 PA A+ T + G AP+ T ++GTA+ R AP+P RA A P Sbjct: 521 PAAAAAVTAAAAAPSVARGSAPSPAVTAAATGTAAAISTR--APTPSPAGRAPAADP 575
>RD23B_HUMAN (P54727) UV excision repair protein RAD23 homolog B (hHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 409 Score = 29.6 bits (65), Expect = 7.9 Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -3 Query: 369 AAEPAGRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPS-PMAGSRALTAA 193 A+ A +STTTT Q P PAL T+T ASI+P TA S P S A Sbjct: 94 ASTTAVTSSTTTTVAQA---PTPVPALAPTST---PASITPASATASSEPAPASAAKQEK 147 Query: 192 PA 187 PA Sbjct: 148 PA 149
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 29.6 bits (65), Expect = 7.9 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -3 Query: 405 LRISASSMG*RCAAEPAGRASTTTTTRQGAAWPGRAPALTRTTT--SSGTASISPRRRTA 232 +R+ + G C + PA ++ T ++ G W T TTT + TA+ + RTA Sbjct: 2404 IRVFCCNYG-HCPSTPATSSTATPSSTPGTTWILTELTTTATTTESTGSTATPTSTLRTA 2462 Query: 231 PSP 223 P P Sbjct: 2463 PPP 2465
>AMYG_ASPKA (P23176) Glucoamylase I precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 639 Score = 29.6 bits (65), Expect = 7.9 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Frame = -3 Query: 396 SASSMG*RCAAEPA-GRASTTTTTRQGAAWPGRAPALTRTTTSSGTASISPRRRTAPSPM 220 SASS CAA A G S+ T T +WP TTT++ T S + + Sbjct: 464 SASSWPGTCAATSASGTYSSVTVT----SWPSIVATGGTTTTATTTGSGGVTSTSKTTTT 519 Query: 219 AGSRALTAAPASCT 178 A + T + SCT Sbjct: 520 ASKTSTTTSSTSCT 533
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 3/109 (2%) Frame = -3 Query: 501 SGGASPTSRGHXXXXXXXXXXXXXXXXXXXXPLRISASSMG*RCAAEPAGRASTTTTTRQ 322 +G ++ T P SA++ P +T TTT Sbjct: 271 TGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPS 330 Query: 321 GAAWPGRAPALTR---TTTSSGTASISPRRRTAPSPMAGSRALTAAPAS 184 A +P T +TTS+ T + + T+P GS + TA P+S Sbjct: 331 EATTATTSPESTTVSASTTSATTTAFTTESHTSPDSSTGSTS-TAEPSS 378 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,234,800 Number of Sequences: 219361 Number of extensions: 1459281 Number of successful extensions: 5981 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 5390 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5912 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
