ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd14b13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence Length = 916 Score = 452 bits (228), Expect = e-124 Identities = 405/464 (87%) Strand = Plus / Minus Query: 174 gatcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggag 233 ||||||||| |||| | ||||||||||| ||||||||||||||||| | ||| |||||| Sbjct: 611 gatcagtgctggatgggagggctgcagtaggggcccttgagccagccgtcggcaatggag 552 Query: 234 cggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagag 293 ||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| | | Sbjct: 551 cggtaggccgcctcggtgaggtggatgccgtcccagatgaggtagttgcccgggtcggcg 492 Query: 294 caggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgc 353 |||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||| Sbjct: 491 caggcgctggccccggccatgccgcaccgcgccttgttgttgtagccgtactggccctgc 432 Query: 354 ccgccggctccgcagcacaccttcagcccatacttgaggccgaaattctgaggggcccgg 413 |||||||| |||||||| ||||| || || |||||||| ||||| || |||||||||||| Sbjct: 431 ccgccggcgccgcagcagaccttgaggccgtacttgagcccgaagttgtgaggggcccgg 372 Query: 414 atcatctggatgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtc 473 ||||| ||| ||||||| | ||||||||||||||||||||||| || ||| ||||| ||| Sbjct: 371 atcatgtgggtgacctgggtgtagaagtcggcgtacatgatccgggcgtgcgggtacgtc 312 Query: 474 ctctggaggttggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttg 533 || | ||| || ||||||||||| ||||||| |||||||| || |||||| ||||| Sbjct: 311 ctgcgcaggccggacaggctccgccgcagcagcgcgttgtggtaggaggagaggccgttg 252 Query: 534 tagctcttgaggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtg 593 ||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||| Sbjct: 251 taggcgcggaggcagccgtcgcggtcgtagtcggcggcgttggaggtgccgtagagggtg 192 Query: 594 aggtagatggggaagcacccgatggggagcacccccggcaccac 637 ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 191 aggtagatggggaagcagccgatggggagcaccccgggcaccac 148
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete cds Length = 1413 Score = 276 bits (139), Expect = 8e-71 Identities = 382/463 (82%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1149 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1090 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1089 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1030 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1029 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 970 Query: 355 cgccggctccgcagcacaccttcagcccatacttgaggccgaaattctgaggggcccgga 414 | || || |||||||||||||||||||| || || || ||||| || || || | |||| Sbjct: 969 ctcccgccccgcagcacaccttcagcccgtatttcagcccgaagttttggggagagcgga 910 Query: 415 tcatctggatgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcc 474 ||| ||||||||| |||||| || |||||||||| ||||| || ||||| |||| Sbjct: 909 ccatagcagtgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcc 850 Query: 475 tctggaggttggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgt 534 |||||||||||| |||||| | | ||||| || |||||||| || |||||| |||| Sbjct: 849 tctggaggttggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgt 790 Query: 535 agctcttgaggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtga 594 ||||||||||||| || | || |||||||| | ||||||| || || ||||| || | Sbjct: 789 agctcttgaggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtca 730 Query: 595 ggtagatggggaagcacccgatggggagcacccccggcaccac 637 ||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 729 ggtagatcgggaagcacccgatgggtagaacccctggcaccac 687
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full insert sequence Length = 1410 Score = 276 bits (139), Expect = 8e-71 Identities = 382/463 (82%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1153 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1094 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1093 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1034 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1033 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 974 Query: 355 cgccggctccgcagcacaccttcagcccatacttgaggccgaaattctgaggggcccgga 414 | || || |||||||||||||||||||| || || || ||||| || || || | |||| Sbjct: 973 ctcccgccccgcagcacaccttcagcccgtatttcagcccgaagttttggggagagcgga 914 Query: 415 tcatctggatgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcc 474 ||| ||||||||| |||||| || |||||||||| ||||| || ||||| |||| Sbjct: 913 ccatagcagtgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcc 854 Query: 475 tctggaggttggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgt 534 |||||||||||| |||||| | | ||||| || |||||||| || |||||| |||| Sbjct: 853 tctggaggttggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgt 794 Query: 535 agctcttgaggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtga 594 ||||||||||||| || | || |||||||| | ||||||| || || ||||| || | Sbjct: 793 agctcttgaggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtca 734 Query: 595 ggtagatggggaagcacccgatggggagcacccccggcaccac 637 ||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 733 ggtagatcgggaagcacccgatgggtagaacccctggcaccac 691
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full insert sequence Length = 1422 Score = 276 bits (139), Expect = 8e-71 Identities = 382/463 (82%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1164 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1105 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 1104 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1045 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 1044 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 985 Query: 355 cgccggctccgcagcacaccttcagcccatacttgaggccgaaattctgaggggcccgga 414 | || || |||||||||||||||||||| || || || ||||| || || || | |||| Sbjct: 984 ctcccgccccgcagcacaccttcagcccgtatttcagcccgaagttttggggagagcgga 925 Query: 415 tcatctggatgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcc 474 ||| ||||||||| |||||| || |||||||||| ||||| || ||||| |||| Sbjct: 924 ccatagcagtgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcc 865 Query: 475 tctggaggttggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgt 534 |||||||||||| |||||| | | ||||| || |||||||| || |||||| |||| Sbjct: 864 tctggaggttggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgt 805 Query: 535 agctcttgaggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtga 594 ||||||||||||| || | || |||||||| | ||||||| || || ||||| || | Sbjct: 804 agctcttgaggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtca 745 Query: 595 ggtagatggggaagcacccgatggggagcacccccggcaccac 637 ||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 744 ggtagatcgggaagcacccgatgggtagaacccctggcaccac 702
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 274 bits (138), Expect = 3e-70 Identities = 366/442 (82%) Strand = Plus / Minus Query: 196 tgcagtaagggcccttgagccagccattggcgatggagcggtacgccgcctcggtgagat 255 ||||||| ||||||||||||||||||| ||||||||||||||| || |||||||| || | Sbjct: 1066 tgcagtaggggcccttgagccagccatcggcgatggagcggtaggcggcctcggtaaggt 1007 Query: 256 ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 315 |||||||||||||||||||||||||| |||||| | ||||||||| | ||||| ||||| Sbjct: 1006 ggatgccgtcccagatgaggtagttggccgggtcggcgcaggcgctggacccggacatgc 947 Query: 316 cgcaccttgccttgttgttgtagttgtacttgccctgcccgccggctccgcagcacacct 375 |||||| || |||||||||||||||||| | |||||||| || || ||||||||||||| Sbjct: 946 cgcaccgcgctttgttgttgtagttgtacgtcccctgccctcccgccccgcagcacacct 887 Query: 376 tcagcccatacttgaggccgaaattctgaggggcccggatcatctggatgacctgcgcgt 435 ||||||| || || || ||||| || || || | |||| ||| ||||||||| || Sbjct: 886 tcagcccgtatttcagcccgaagttttggggagagcggaccatagcagtgacctgcgagt 827 Query: 436 agaagtcggcgtacatgatcctggtgtgggggtatgtcctctggaggttggcgaggctcc 495 |||| || |||||||||| ||||| || ||||| |||||||||||||||| |||||| | Sbjct: 826 agaaatcagcgtacatgaccctggcatgtgggtacgtcctctggaggttggagaggcttc 767 Query: 496 gccggagcagcgagttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgc 555 | ||||| || |||||||| || |||||| ||||||||||||||||| || | || Sbjct: 766 tcttgagcaacgtgttgtggtaggaggagaggctattgtagctcttgaggcaaccattgc 707 Query: 556 cgtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccga 615 |||||||| | ||||||| || || ||||| || |||||||| ||||||||||||| Sbjct: 706 gatcgtagtctgcaccgttggatgtgccatagagcgtcaggtagatcgggaagcacccga 647 Query: 616 tggggagcacccccggcaccac 637 |||| || ||||| |||||||| Sbjct: 646 tgggtagaacccctggcaccac 625
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 206 bits (104), Expect = 7e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 10490 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 10431 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 10430 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 10371 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 10370 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 10311 Query: 355 cgccggctccgcagcacaccttcagccc 382 | || || |||||||||||||||||||| Sbjct: 10310 ctcccgccccgcagcacaccttcagccc 10283 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 424 tgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcctctggaggt 483 ||||||||| |||||| || |||||||||| ||||| || ||||| ||||||||||||| Sbjct: 8600 tgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcctctggaggt 8541 Query: 484 tggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgtagctcttga 543 ||| |||||| | | ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 8540 tggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgtagctcttga 8481 Query: 544 ggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatgg 603 |||| || | || |||||||| | ||||||| || || ||||| || |||||||| | Sbjct: 8480 ggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtcaggtagatcg 8421 Query: 604 ggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||||| || ||||| |||||||| Sbjct: 8420 ggaagcacccgatgggtagaacccctggcaccac 8387 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 222 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 46209 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 46162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccagatgaggtag 278 ||||||||||||||||||||||||||| ||| |||| Sbjct: 61848 gcctcggtgagatggatgccgtcccagttgacgtag 61813
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 206 bits (104), Expect = 7e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 77391 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 77332 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 77331 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 77272 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 77271 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 77212 Query: 355 cgccggctccgcagcacaccttcagccc 382 | || || |||||||||||||||||||| Sbjct: 77211 ctcccgccccgcagcacaccttcagccc 77184 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 424 tgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcctctggaggt 483 ||||||||| |||||| || |||||||||| ||||| || ||||| ||||||||||||| Sbjct: 75501 tgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcctctggaggt 75442 Query: 484 tggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgtagctcttga 543 ||| |||||| | | ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 75441 tggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgtagctcttga 75382 Query: 544 ggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatgg 603 |||| || | || |||||||| | ||||||| || || ||||| || |||||||| | Sbjct: 75381 ggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtcaggtagatcg 75322 Query: 604 ggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||||| || ||||| |||||||| Sbjct: 75321 ggaagcacccgatgggtagaacccctggcaccac 75288 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 222 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 113110 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 113063
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 206 bits (104), Expect = 7e-50 Identities = 182/208 (87%) Strand = Plus / Minus Query: 175 atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 234 ||||||| | |||| | ||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 6706229 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 6706170 Query: 235 ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 294 |||| || |||||||| || ||||||||||||||||||||||||||| |||||| | || Sbjct: 6706169 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 6706110 Query: 295 aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 354 ||||||| | ||||| ||||||||||| || |||||||||||||||||| | ||||||| Sbjct: 6706109 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 6706050 Query: 355 cgccggctccgcagcacaccttcagccc 382 | || || |||||||||||||||||||| Sbjct: 6706049 ctcccgccccgcagcacaccttcagccc 6706022 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 424 tgacctgcgcgtagaagtcggcgtacatgatcctggtgtgggggtatgtcctctggaggt 483 ||||||||| |||||| || |||||||||| ||||| || ||||| ||||||||||||| Sbjct: 6704339 tgacctgcgagtagaaatcagcgtacatgaccctggcatgtgggtacgtcctctggaggt 6704280 Query: 484 tggcgaggctccgccggagcagcgagttgtggtgggcggagagctcgttgtagctcttga 543 ||| |||||| | | ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 6704279 tggagaggcttctcttgagcaacgtgttgtggtaggaggagaggctattgtagctcttga 6704220 Query: 544 ggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatgg 603 |||| || | || |||||||| | ||||||| || || ||||| || |||||||| | Sbjct: 6704219 ggcaaccattgcgatcgtagtctgcaccgttggatgtgccatagagcgtcaggtagatcg 6704160 Query: 604 ggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||||| || ||||| |||||||| Sbjct: 6704159 ggaagcacccgatgggtagaacccctggcaccac 6704126 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 222 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 6741948 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 6741901 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccagatgaggtag 278 ||||||||||||||||||||||||||| ||| |||| Sbjct: 6757587 gcctcggtgagatggatgccgtcccagttgacgtag 6757552
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Minus Query: 521 ggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgccggcgttggaggt 580 |||||| |||||| | |||||||||||||| | |||||||||| ||||| ||||||| Sbjct: 905 ggagaggtcgttgaacttcttgaggcagccgagggagtcgtagtcggcggcgctggaggt 846 Query: 581 cccgtagagggtgaggtagatggggaagcacccgatggggagcacccccggcaccac 637 ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 845 gccgtagatggtgaggtagatggggaagcagccgatggggagcacccccggcaccac 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccagatgaggt 276 ||||||||||| ||||||||||||||| |||||| Sbjct: 1180 gcctcggtgaggtggatgccgtcccagctgaggt 1147 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 432 gcgtagaagtcggcgtacatgat 454 ||||||||||||||||||||||| Sbjct: 994 gcgtagaagtcggcgtacatgat 972
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA sequence Length = 1334 Score = 123 bits (62), Expect = 8e-25 Identities = 113/130 (86%) Strand = Plus / Minus Query: 499 ggagcagcgagttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgt 558 ||||||||||||||||| |||| || ||| ||||| | | ||| |||||||||| || Sbjct: 804 ggagcagcgagttgtggcgggccgacagcgcgttgaaccgcttcaggcagccgtactggt 745 Query: 559 cgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatgg 618 ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| || Sbjct: 744 cgtagtcgccggcgttggaggtctggtagagcgtgaggtagatggggaagcagccgacgg 685 Query: 619 ggagcacccc 628 |||||||||| Sbjct: 684 ggagcacccc 675 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgatcctggtgtgggggta 469 |||||||||||||||||||||| ||| || |||||| Sbjct: 869 gtagaagtcggcgtacatgatcttggcgtaggggta 834 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 306 ccggccatgccgcaccttgccttgttgttgtagttgtacttgcc 349 |||| |||||||||||| ||| ||| | ||||||||||||||| Sbjct: 994 ccggacatgccgcacctagccccgttctggtagttgtacttgcc 951
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 121 bits (61), Expect = 3e-24 Identities = 112/129 (86%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| || |||||| |||||| | |||||||||||||| ||||||||||| | Sbjct: 868 gttgtggttggtggagaggtcgttgaacttcttgaggcagccgagcgcgtcgtagtcggc 809 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 | ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||| || Sbjct: 808 gctgttggaggtgccgtagacggtgaggtagatggggaagcagccgatggggagcacgcc 749 Query: 629 cggcaccac 637 ||||||||| Sbjct: 748 cggcaccac 740 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccagatgaggt 276 ||||||||||| ||||||||||||||| |||||| Sbjct: 1131 gcctcggtgaggtggatgccgtcccagctgaggt 1098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 943 gtagaagtcggcgtacatgat 923
>ref|NM_188436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 762 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 703 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 702 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 643 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 642 cggcaccacgatg 630 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1060 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1001 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1000 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 941 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 940 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 886
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 2893674 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 2893615 Query: 617 ggggagcac 625 ||||||||| Sbjct: 2893614 ggggagcac 2893606 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| || |||||| |||||| | |||||||||||||| || |||||||||| Sbjct: 2908454 gttgtggttggtggagaggtcgttgaacttcttgaggcagccgaggctgtcgtagtcgga 2908513 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcac 625 | | |||||| ||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 2908514 gctggaggaggtgccgtagatggtgaggtagatggggaagcagccgatggggagcac 2908570 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 2894454 gtacgccgcctccgtgagatggatgccgtcccag 2894421 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 gcctcggtgagatggatgccgtcccag 269 ||||||||||| ||||||||||||||| Sbjct: 2907403 gcctcggtgaggtggatgccgtcccag 2907429 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 gcgtagaagtcggcgtacatgatcct 457 |||||| ||||||||||||||||||| Sbjct: 1572550 gcgtagtagtcggcgtacatgatcct 1572525 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 213 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 19518616 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 19518672 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 2908379 gtagaagtcggcgtacatgat 2908399 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 2893797 gtagaagtcggcgtacatgat 2893777 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 318 caccttgccttgttgttgtagttgtacttgcc 349 ||||| || ||||||||||||||| ||||||| Sbjct: 2907478 cacctcgcgttgttgttgtagttgaacttgcc 2907509 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgatcct 457 |||| ||||||||||||||||||| Sbjct: 2899040 gtagtagtcggcgtacatgatcct 2899017
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 6267600 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 6267541 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 6267540 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 6267481 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 6267480 cggcaccacgatg 6267468 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 6269493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 6269434 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 6269433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 6269374 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 6269373 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 6269319 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 6282199 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 6282142 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccggcgttggagg 579 |||||||||||||| |||| |||||||||||| Sbjct: 38902741 gccgtcgccgtcgtcgtcgtcggcgttggagg 38902710 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 6319626 cgtagtagtcggcgtacatgatcctgg 6319600 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 6305210 ggtacgccgcctcggtgaggtgcacgccgtcccag 6305176 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 6278634 gggaagcacccgatcggcagcaccccgggcaccac 6278600 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 6380761 gccgcctccgtgaggtggatgccgtcccag 6380732 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 6365981 gccgcctccgtgaggtggatgccgtcccag 6365952 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 6342892 gccgcctccgtgaggtggatgccgtcccag 6342863 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ggagcagcgagttgtggtggg 519 ||||||||||||||||||||| Sbjct: 6733842 ggagcagcgagttgtggtggg 6733862
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 129798 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 129739 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 129738 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 129679 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 129678 cggcaccacgatg 129666 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 131691 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 131632 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 131631 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 131572 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 131571 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 131517 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 144397 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 144340 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 167408 ggtacgccgcctcggtgaggtgcacgccgtcccag 167374 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 140832 gggaagcacccgatcggcagcaccccgggcaccac 140798
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 38666 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 38607 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 38606 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 38547 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 38546 cggcaccacgatg 38534 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 40559 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 40500 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 40499 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 40440 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 40439 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 40385 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 53265 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 53208 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 90692 cgtagtagtcggcgtacatgatcctgg 90666 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 76276 ggtacgccgcctcggtgaggtgcacgccgtcccag 76242 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 49700 gggaagcacccgatcggcagcaccccgggcaccac 49666 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 151827 gccgcctccgtgaggtggatgccgtcccag 151798 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 137047 gccgcctccgtgaggtggatgccgtcccag 137018 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 113958 gccgcctccgtgaggtggatgccgtcccag 113929
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 137155 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 137096 Query: 617 ggggagcac 625 ||||||||| Sbjct: 137095 ggggagcac 137087 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 137935 gtacgccgcctccgtgagatggatgccgtcccag 137902 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 137278 gtagaagtcggcgtacatgat 137258 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgatcct 457 |||| ||||||||||||||||||| Sbjct: 142521 gtagtagtcggcgtacatgatcct 142498
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 53820 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 53761 Query: 617 ggggagcac 625 ||||||||| Sbjct: 53760 ggggagcac 53752 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| || |||||| |||||| | |||||||||||||| || |||||||||| Sbjct: 68600 gttgtggttggtggagaggtcgttgaacttcttgaggcagccgaggctgtcgtagtcgga 68659 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcac 625 | | |||||| ||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 68660 gctggaggaggtgccgtagatggtgaggtagatggggaagcagccgatggggagcac 68716 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 54600 gtacgccgcctccgtgagatggatgccgtcccag 54567 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 gcctcggtgagatggatgccgtcccag 269 ||||||||||| ||||||||||||||| Sbjct: 67549 gcctcggtgaggtggatgccgtcccag 67575 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 68525 gtagaagtcggcgtacatgat 68545 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 53943 gtagaagtcggcgtacatgat 53923 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 318 caccttgccttgttgttgtagttgtacttgcc 349 ||||| || ||||||||||||||| ||||||| Sbjct: 67624 cacctcgcgttgttgttgtagttgaacttgcc 67655 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgatcct 457 |||| ||||||||||||||||||| Sbjct: 59186 gtagtagtcggcgtacatgatcct 59163
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full insert sequence Length = 1430 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 770 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 711 Query: 617 ggggagcac 625 ||||||||| Sbjct: 710 ggggagcac 702 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 1088 gtacgccgcctccgtgagatggatgccgtcccag 1055 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 893 gtagaagtcggcgtacatgat 873
>dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B12, full insert sequence Length = 1772 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 1195 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 1136 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 1135 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 1076 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 1075 cggcaccacgatg 1063 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1434 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1374 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 1373 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 1319
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full insert sequence Length = 1429 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 769 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 710 Query: 617 ggggagcac 625 ||||||||| Sbjct: 709 ggggagcac 701 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 1087 gtacgccgcctccgtgagatggatgccgtcccag 1054 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 892 gtagaagtcggcgtacatgat 872
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full insert sequence Length = 1417 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 767 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 708 Query: 617 ggggagcac 625 ||||||||| Sbjct: 707 ggggagcac 699 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 890 gtagaagtcggcgtacatgat 870
>dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K20, full insert sequence Length = 1416 Score = 97.6 bits (49), Expect = 4e-17 Identities = 112/133 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| | ||||||| ||||||||||||||||||||| | ||||||||||||| | Sbjct: 839 gttgtggtagacggagagggagttgtagctcttgaggcagccattgccgtcgtagtcgtc 780 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcacccc 628 || ||||||| || ||| || || ||||| | |||||||||||||| || | |||||| Sbjct: 779 ggagttggagctctggtacagcgtcaggtacagcgggaagcacccgatcggcatcacccc 720 Query: 629 cggcaccacgatg 641 ||||||||||||| Sbjct: 719 cggcaccacgatg 707 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 211 tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 270 ||||||| |||| ||||| || ||||| || ||||||||||| || ||||| ||||||| Sbjct: 1137 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1078 Query: 271 tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 330 | ||| || | |||||| ||||| || ||||| | |||||| ||||| ||||||| Sbjct: 1077 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1018 Query: 331 tgttgtagttgtacttgccctgcccgccggctccgcagcacaccttcagcccata 385 | ||||||||||| ||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 1017 tattgtagttgtaggagccttgcccaccggcgccgcagcacactttcaggccata 963
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full insert sequence Length = 1450 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 557 gtcgtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgat 616 |||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||| Sbjct: 767 gtcgtagtcgccggcgttggaggtgccgtacagcgtgaggtagatggggaagcagccgac 708 Query: 617 ggggagcac 625 ||||||||| Sbjct: 707 ggggagcac 699 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||| ||||||||||||||||||||| Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 890 gtagaagtcggcgtacatgat 870
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence Length = 811 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 541 tgaggcagccgtcgccgtcgtagtcgccggcgttggaggtcccgtagagggtgaggtaga 600 ||||||||||| || |||||||||| || | ||||||| ||||||| ||||||||||| Sbjct: 203 tgaggcagccgaggctgtcgtagtcggcgctgctggaggtgccgtagaaggtgaggtaga 144 Query: 601 tggggaagcacccgatggggagcacccccggcaccacga 639 |||||||||| ||||||||||| || || |||||||||| Sbjct: 143 tggggaagcagccgatggggaggacgccgggcaccacga 105 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 236 gtacgccgcctcggtgagatggatgccgtcccagatgaggt 276 |||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 508 gtacgcggcctcggtgaggtggatgccgtcccagctgaggt 468 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 310 gtagaagtcggcgtacatgat 290
>gb|BT009047.1| Triticum aestivum clone wdk9n.pk001.k24:fis, full insert mRNA sequence Length = 1226 Score = 91.7 bits (46), Expect = 3e-15 Identities = 115/138 (83%) Strand = Plus / Minus Query: 500 gagcagcgagttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtc 559 ||||||| |||||||| | |||| || |||||| ||| | ||||||||||||| || || Sbjct: 761 gagcagccggttgtggtagccggacaggtcgttgaagcgcctgaggcagccgtccccatc 702 Query: 560 gtagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggg 619 |||||||| ||||||| ||||||| ||||| ||||||| |||||||||||||| || Sbjct: 701 gtagtcgctctggttggagctcccgtacagggtcaggtagagcgggaagcacccgatcgg 642 Query: 620 gagcacccccggcaccac 637 ||||| ||||||||||| Sbjct: 641 cagcacgcccggcaccac 624 Score = 40.1 bits (20), Expect = 8.7 Identities = 71/88 (80%) Strand = Plus / Minus Query: 256 ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 315 |||||||||||||| | | ||||| || ||||| ||||||||| | |||| ||||| Sbjct: 1005 ggatgccgtcccagttcaaatagttctgagggtccttgcaggcgcttgagccggacatgc 946 Query: 316 cgcaccttgccttgttgttgtagttgta 343 | ||||| ||||| || ||||||||||| Sbjct: 945 cacacctcgccttattattgtagttgta 918
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full insert sequence Length = 1392 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcgtagtcgcc 568 |||||||| || |||||| |||||| | |||||||||||||| || |||||||||| Sbjct: 766 gttgtggttggtggagaggtcgttgaacttcttgaggcagccgaggctgtcgtagtcgga 707 Query: 569 ggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatggggagcac 625 | | |||||| ||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 706 gctggaggaggtgccgtagatggtgaggtagatggggaagcagccgatggggagcac 650 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccag 269 ||||||||||| ||||||||||||||| Sbjct: 1029 gcctcggtgaggtggatgccgtcccag 1003 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgat 454 ||||||||||||||||||||| Sbjct: 841 gtagaagtcggcgtacatgat 821 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 318 caccttgccttgttgttgtagttgtacttgcc 349 ||||| || ||||||||||||||| ||||||| Sbjct: 954 cacctcgcgttgttgttgtagttgaacttgcc 923
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 501 agcagcgagttgtggtgggcggagagctcgttgtagctcttgaggcagccgtcgccgtcg 560 |||||||||||||| || || || ||| ||||| ||| ||| |||||||||| |||| Sbjct: 837 agcagcgagttgtgctgcgccgacagcgcgttgaagcgcttcaggcagccgtactggtcg 778 Query: 561 tagtcgccggcgttggaggtcccgtagagggtgaggtagatggggaagcacccgatgggg 620 |||||||||||| |||||||| ||| || || |||||||| ||||||||||| | ||| Sbjct: 777 tagtcgccggcgctggaggtctggtacagcgtcaggtagatcgggaagcaccccacgggc 718 Query: 621 agcacccccggcaccac 637 ||||| ||||| ||||| Sbjct: 717 agcacgcccgggaccac 701 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 237 tacgccgcctcggtgagatggatgccgtcccagatgag 274 ||||||||||| || || ||||||||||||||| |||| Sbjct: 1098 tacgccgcctccgtcaggtggatgccgtcccagctgag 1061 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatga 453 |||||||||||||||||||| Sbjct: 904 gtagaagtcggcgtacatga 885
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 222 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 1043 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 996
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full insert sequence Length = 1551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 222 ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||| | |||||||||||| ||||||||||||||| Sbjct: 1133 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 1086
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 1071 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1014 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 677 gggaagcacccgatcggcagcaccccgggcaccac 643
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 601 gggaagcacccgatcggcagcaccccgggcaccac 567
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 1223 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1166 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 829 gggaagcacccgatcggcagcaccccgggcaccac 795
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| ||||||||| || ||| | |||||||||||| ||||||||||||||| Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 601 gggaagcacccgatcggcagcaccccgggcaccac 567
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 243 gcctcggtgagatggatgccgtcccagatgaggtag 278 ||||||||||||||||||||||||||| ||| |||| Sbjct: 1064 gcctcggtgagatggatgccgtcccagttgacgtag 1029
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence Length = 117723 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 119 catcaagtcaataaataaaacaataa 144 |||||||||||||||||||||||||| Sbjct: 72002 catcaagtcaataaataaaacaataa 72027
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccggcg 572 ||||||||||||||||||||||||| Sbjct: 2440706 gccgtcgccgtcgtagtcgccggcg 2440682 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 548 gccgtcgccgtcgtagtcgccgg 570 ||||||||||||||||||||||| Sbjct: 2463110 gccgtcgccgtcgtagtcgccgg 2463132 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccgg 570 ||||||||||||||||||||||| Sbjct: 2449211 gccgtcgccgtcgtagtcgccgg 2449189 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccgg 570 ||||||||||||||||||||||| Sbjct: 2445556 gccgtcgccgtcgtagtcgccgg 2445534 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gtcgccgtcgtagtcgccgg 570 |||||||||||||||||||| Sbjct: 2448803 gtcgccgtcgtagtcgccgg 2448784
>ref|NM_190254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 213 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 548 gccgtcgccgtcgtagtcgccggcgttggagg 579 |||||||||||||| |||| |||||||||||| Sbjct: 117 gccgtcgccgtcgtcgtcgtcggcgttggagg 148
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 40 aaaattcatcatattagttgttac 63 |||||||||||||||||||||||| Sbjct: 82727 aaaattcatcatattagttgttac 82750
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccggcgttggagg 579 |||||||||||||| |||| |||||||||||| Sbjct: 175623 gccgtcgccgtcgtcgtcgtcggcgttggagg 175592
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccggcgttggagg 579 |||||||||||||| |||| |||||||||||| Sbjct: 67527 gccgtcgccgtcgtcgtcgtcggcgttggagg 67496
>dbj|AK107053.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-D04, full insert sequence Length = 530 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 548 gccgtcgccgtcgtagtcgccggcgttggagg 579 |||||||||||||| |||| |||||||||||| Sbjct: 213 gccgtcgccgtcgtcgtcgtcggcgttggagg 244
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 874 cgtagtagtcggcgtacatgatcctgg 848
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 1045 ggtacgccgcctcggtgaggtgcacgccgtcccag 1011
>gb|AY566266.1| Avena sativa lipase 1 mRNA, complete cds Length = 1410 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 509 gttgtggtgggcggagagctcgttgtagctcttgaggca 547 ||||||||| |||||||||||||| ||| ||||||||| Sbjct: 792 gttgtggtgcacggagagctcgttgaagcccttgaggca 754
>gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67150 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 347 gccctgcccgccggctccgcagc 369 ||||||||||||||||||||||| Sbjct: 35902 gccctgcccgccggctccgcagc 35924
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccgg 570 ||||||||||||||||||||||| Sbjct: 146482 gccgtcgccgtcgtagtcgccgg 146460
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 937 cgtagtagtcggcgtacatgatcctgg 911
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 934 cgtagtagtcggcgtacatgatcctgg 908
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full insert sequence Length = 1623 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 1228 ggtacgccgcctcggtgaggtgcacgccgtcccag 1194
>dbj|AK069801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030G06, full insert sequence Length = 2935 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 603 gggaagcacccgatggggagcacccccggcaccac 637 |||||||||||||| || |||||||| |||||||| Sbjct: 827 gggaagcacccgatcggcagcaccccgggcaccac 793
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 937 cgtagtagtcggcgtacatgatcctgg 911
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full insert sequence Length = 1622 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||||||||||||| || | |||||||||| Sbjct: 1227 ggtacgccgcctcggtgaggtgcacgccgtcccag 1193
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcctgg 459 ||||| ||||||||||||||||||||| Sbjct: 1197 cgtagtagtcggcgtacatgatcctgg 1171
>ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa8592 predicted mRNA Length = 642 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 gcgtagaagtcggcgtacatgatcct 457 |||||| ||||||||||||||||||| Sbjct: 389 gcgtagtagtcggcgtacatgatcct 364
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 1034 gccgcctccgtgaggtggatgccgtcccag 1005
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 1061 gccgcctccgtgaggtggatgccgtcccag 1032
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 1067 gccgcctccgtgaggtggatgccgtcccag 1038
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 224 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 14135818 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14135773
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 224 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 10109 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 10064
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 224 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 14130793 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14130748
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 3156 gccgcctccgtgaggtggatgccgtcccag 3127
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 432 gcgtagaagtcggcgtacatgatcct 457 |||||| ||||||||||||||||||| Sbjct: 101274 gcgtagtagtcggcgtacatgatcct 101249
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>dbj|AK069388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H01, full insert sequence Length = 942 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 224 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||| || |||| || |||||||||||||| | |||||||||| Sbjct: 676 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 631
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 240 gccgcctcggtgagatggatgccgtcccag 269 |||||||| ||||| ||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence Length = 847 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Minus Query: 212 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 ||||||||| |||||||| || ||| || ||||| ||||| ||||||||||||||| Sbjct: 354 gagccagcccctggcgatgtggccgtaggcggcctccgtgaggtggatgccgtcccag 297
>gb|AC124150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0001I22, complete sequence Length = 162413 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 530 gttgtagctcttgaggcagccgtcgccgtcgtagtcgccgg 570 |||||| |||||||||||||| | ||||||||||||||| Sbjct: 100833 gttgtaactcttgaggcagccccggtcgtcgtagtcgccgg 100793
>gb|AF526280.1| Sida crystallina elongation factor-1 alpha gene, partial cds Length = 1228 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 422 gatgacctgcgcgtagaagtcggcg 446 ||||||||| ||||||||||||||| Sbjct: 992 gatgacctgagcgtagaagtcggcg 968
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence Length = 112873 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ataaaattcatcatattagtt 58 ||||||||||||||||||||| Sbjct: 79674 ataaaattcatcatattagtt 79694
>emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on chromosome X Contains a novel pseudogene and a lactate dehydrogenase B pseudogene, complete sequence Length = 155885 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 attcatcatattagttgttac 63 ||||||||||||||||||||| Sbjct: 145867 attcatcatattagttgttac 145847
>emb|AL096709.11|HSDJ20N4 Human DNA sequence from clone RP1-20N4 on chromosome 6q12-13 Contains a beclin 1 (BECN1) pseudogene, complete sequence Length = 138025 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 attcatcatattagttgttac 63 ||||||||||||||||||||| Sbjct: 48232 attcatcatattagttgttac 48212
>ref|XM_965306.1| PREDICTED: Tribolium castaneum similar to CG3943-PA (LOC658960), mRNA Length = 1081 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 tggatgccgtcccagatgaggtagt 279 |||||||||||||||| |||||||| Sbjct: 275 tggatgccgtcccagaagaggtagt 251
>gb|AE005972.1| Caulobacter crescentus CB15 section 298 of 359 of the complete genome Length = 11923 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cagagcaggcgctcgccccgg 309 ||||||||||||||||||||| Sbjct: 1004 cagagcaggcgctcgccccgg 1024
>gb|AC092765.2| Homo sapiens chromosome 1 clone RP11-400N13, complete sequence Length = 188261 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 533 gtagctcttgaggcagccgtc 553 ||||||||||||||||||||| Sbjct: 176788 gtagctcttgaggcagccgtc 176808
>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence Length = 174399 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 attcatcatattagttgttac 63 ||||||||||||||||||||| Sbjct: 156719 attcatcatattagttgttac 156739
>gb|AC093781.2| Homo sapiens BAC clone RP11-183D16 from 4, complete sequence Length = 156058 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 attcatcatattagttgttac 63 ||||||||||||||||||||| Sbjct: 20157 attcatcatattagttgttac 20177
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 530 gttgtagctcttgaggcagccgtcgccgtcgtagtcgccgg 570 |||||| |||||||||||||| | ||||||||||||||| Sbjct: 18137796 gttgtaactcttgaggcagccccggtcgtcgtagtcgccgg 18137836
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence Length = 95291 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 attcatcatattagttgttac 63 ||||||||||||||||||||| Sbjct: 57779 attcatcatattagttgttac 57799
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ggagcagcgagttgtggtggg 519 ||||||||||||||||||||| Sbjct: 85994 ggagcagcgagttgtggtggg 86014
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ggagcagcgagttgtggtggg 519 ||||||||||||||||||||| Sbjct: 15903 ggagcagcgagttgtggtggg 15923
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 213 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 348 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 404
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Plus Query: 213 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 137025 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 137081
>dbj|AK108542.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D07, full insert sequence Length = 1311 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 530 gttgtagctcttgaggcagccgtcgccgtcgtagtcgccgg 570 |||||| |||||||||||||| | ||||||||||||||| Sbjct: 851 gttgtaactcttgaggcagccccggtcgtcgtagtcgccgg 811
>gb|AC022517.1|AC022517 Homo sapiens chromosome 19, BC335474 (CIT-HSPC_482H14), complete sequence Length = 157566 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 cgggggctgcagtaagggcccttga 213 |||||||||||||||||||| |||| Sbjct: 109398 cgggggctgcagtaagggcctttga 109374
>dbj|AK107015.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G02, full insert sequence Length = 2228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 ggagcagcgagttgtggtggg 519 ||||||||||||||||||||| Sbjct: 1588 ggagcagcgagttgtggtggg 1608
>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full insert sequence Length = 1580 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Minus Query: 213 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 1215 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1159
>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full insert sequence Length = 1323 Score = 42.1 bits (21), Expect = 2.2 Identities = 48/57 (84%) Strand = Plus / Minus Query: 213 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 269 |||||||||||||||| ||||||| || || ||||| | ||||||||||||||| Sbjct: 1211 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1155
>emb|CR925735.15| Zebrafish DNA sequence from clone CH211-105G15 in linkage group 17, complete sequence Length = 83530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aaataaaacaataatacgtaa 151 ||||||||||||||||||||| Sbjct: 45401 aaataaaacaataatacgtaa 45421
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 ttgtacttgccctgcccgccg 359 ||||||||||||||||||||| Sbjct: 663869 ttgtacttgccctgcccgccg 663889
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 530 gttgtagctcttgaggcagccgtcgccgtcgtagtcgccgg 570 |||||| |||||||||||||| | ||||||||||||||| Sbjct: 18265576 gttgtaactcttgaggcagccccggtcgtcgtagtcgccgg 18265536
>ref|XM_515097.1| PREDICTED: Pan troglodytes similar to tissue inhibitor of metalloproteinase 3; Tissue inhibitor of metalloproteinase-3; K222 expressed in degenerative retinas (LOC458784), mRNA Length = 1767 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gggcccttgagccagccatt 223 |||||||||||||||||||| Sbjct: 41 gggcccttgagccagccatt 60
>ref|XM_464402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 agccgtcgccgtcgtagtcgccgg 570 ||||||||||||||| |||||||| Sbjct: 262 agccgtcgccgtcgttgtcgccgg 239
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence Length = 1420 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 332 gttgtagttgtacttgccctgcccgccggctccgcagcac 371 |||| ||||||| ||||||||||| || || ||||||||| Sbjct: 1080 gttgaagttgtagttgccctgccctcctgcgccgcagcac 1041
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence Length = 226673 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 18594 aagtgaataaataaaacaataata 18571
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcaggcgctcgccccggcca 312 |||||||||||||||||||| Sbjct: 53182 gcaggcgctcgccccggcca 53163
>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 50229 aagtgaataaataaaacaataata 50252
>gb|AY521557.1| Cancer magister clone Cma14 microsatellite sequence Length = 592 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gtcaataaataaaacaataa 144 |||||||||||||||||||| Sbjct: 514 gtcaataaataaaacaataa 495
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete sequence Length = 221748 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ctcacaaaacgcatcaagtcaata 131 ||||||||||| |||||||||||| Sbjct: 196345 ctcacaaaacgtatcaagtcaata 196322
>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence Length = 216326 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 agtcaataaataaaacaata 143 |||||||||||||||||||| Sbjct: 82124 agtcaataaataaaacaata 82143
>emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 in linkage group 1, complete sequence Length = 146409 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aagtcaataaataaaacaataata 146 |||||||||||||||| ||||||| Sbjct: 35536 aagtcaataaataaaaaaataata 35559
>emb|Z72521.1|HSN29F4 Human DNA sequence from clone LL22NC03-29F4 on chromosome 22, complete sequence Length = 19912 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 gggcccttgagccagccatt 223 |||||||||||||||||||| Sbjct: 923 gggcccttgagccagccatt 942
>emb|AL139041.17| Human DNA sequence from clone RP11-408O19 on chromosome 9p11.2-21 Contains the 3' end of the gene for a novel protein similar to sorting nexin 7 (SNX7), the TSCOT gene for thymic stromal co-transporter, a pseudogene similar to Mus musculus major urinary proteins and a CpG island, complete sequence Length = 141659 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 gtagagggtgaggtagatgg 603 |||||||||||||||||||| Sbjct: 32162 gtagagggtgaggtagatgg 32143
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence Length = 1342 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cgtagaagtcggcgtacatgatcc 456 ||||| |||||||||||||||||| Sbjct: 954 cgtagtagtcggcgtacatgatcc 931
>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to 4010779 Length = 201139 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cccgccggctccgcagcaca 372 |||||||||||||||||||| Sbjct: 3999 cccgccggctccgcagcaca 4018
>emb|Z49782.1|BSDNA320D B.subtilis chromosomal DNA (region 320-321 degrees) Length = 25940 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cccgccggctccgcagcaca 372 |||||||||||||||||||| Sbjct: 7164 cccgccggctccgcagcaca 7145
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 gccgtcgccgtcgtagtcgccggc 571 ||||||||||||| |||||||||| Sbjct: 139901 gccgtcgccgtcgaagtcgccggc 139878
>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166471 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tatttattctgtggaggcaa 20 |||||||||||||||||||| Sbjct: 62635 tatttattctgtggaggcaa 62654
>emb|BX957284.5| Zebrafish DNA sequence from clone CH211-10N1 in linkage group 10, complete sequence Length = 60530 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caataaataaaacaataata 146 |||||||||||||||||||| Sbjct: 58629 caataaataaaacaataata 58610
>emb|CR932802.1| Mus musculus chromosome 2, clone GenSys-198F12 strain 129/Sv, complete sequence Length = 99647 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ctggaggttggcgaggctcc 495 |||||||||||||||||||| Sbjct: 79246 ctggaggttggcgaggctcc 79227
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ctggaggttggcgaggctcc 495 |||||||||||||||||||| Sbjct: 24505 ctggaggttggcgaggctcc 24486
>emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in linkage group 16, complete sequence Length = 188754 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcccaccacgcacactcaca 113 |||||||||||||||||||| Sbjct: 136272 tcccaccacgcacactcaca 136253
>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 ccgcaccttgccttgttgttgtag 338 |||||||| ||||||||||||||| Sbjct: 142999 ccgcacctggccttgttgttgtag 143022
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10, complete sequence Length = 258048 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caataaataaaacaataata 146 |||||||||||||||||||| Sbjct: 99 caataaataaaacaataata 80
>gb|AY758220.1| Spartina alterniflora clone Spar.24 microsatellite sequence Length = 559 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ttgttgttgtagttgtactt 346 |||||||||||||||||||| Sbjct: 530 ttgttgttgtagttgtactt 549
>dbj|AK128080.1| Homo sapiens cDNA FLJ46201 fis, clone TESTI4008209 Length = 4074 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 gtagagggtgaggtagatgg 603 |||||||||||||||||||| Sbjct: 958 gtagagggtgaggtagatgg 939
>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14, complete sequence Length = 197865 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aataaataaaacaataatac 147 |||||||||||||||||||| Sbjct: 141814 aataaataaaacaataatac 141833
>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete sequence Length = 89281 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 aaaacaataatacgtaaatcaaca 158 |||| ||||||||||||||||||| Sbjct: 80305 aaaataataatacgtaaatcaaca 80328
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence Length = 171413 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 taaataaaacaataatacgtaaat 153 ||||||| |||||||||||||||| Sbjct: 27749 taaataatacaataatacgtaaat 27726
>gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chromosome unknown, complete sequence Length = 202104 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 gggcccttgagccagccatt 223 |||||||||||||||||||| Sbjct: 109690 gggcccttgagccagccatt 109671
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 92719 aagtaaataaataaaacaataata 92696
>dbj|AK052020.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230036B16 product:similar to KIAA1217 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 2864 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ctggaggttggcgaggctcc 495 |||||||||||||||||||| Sbjct: 135 ctggaggttggcgaggctcc 116
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 548 gccgtcgccgtcgtagtcgccggc 571 |||||||||||||| ||||||||| Sbjct: 2830831 gccgtcgccgtcgtcgtcgccggc 2830854
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 agccgtcgccgtcgtagtcgccgg 570 ||||||||||||||| |||||||| Sbjct: 4954203 agccgtcgccgtcgttgtcgccgg 4954226
>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence Length = 143619 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 ccgcaccttgccttgttgttgtag 338 |||||||| ||||||||||||||| Sbjct: 15297 ccgcacctggccttgttgttgtag 15320
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 agccgtcgccgtcgtagtcgccgg 570 ||||||||||||||| |||||||| Sbjct: 25329 agccgtcgccgtcgttgtcgccgg 25352
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 agccgtcgccgtcgtagtcgccgg 570 ||||||||||||||| |||||||| Sbjct: 98942 agccgtcgccgtcgttgtcgccgg 98965
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcaggcgctcgccccggcca 312 |||||||||||||||||||| Sbjct: 52857 gcaggcgctcgccccggcca 52838
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ctggaggttggcgaggctcc 495 |||||||||||||||||||| Sbjct: 54822 ctggaggttggcgaggctcc 54803
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full insert sequence Length = 1439 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 434 gtagaagtcggcgtacatgatcct 457 |||| ||||||||||||||||||| Sbjct: 980 gtagtagtcggcgtacatgatcct 957
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 aggcgctcgccccggccatgccgc 318 ||||||| |||||||||||||||| Sbjct: 3030070 aggcgctggccccggccatgccgc 3030047
>gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, complete sequence Length = 150474 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagtcaataaataaaacaataata 146 |||||||||||||||| ||||||| Sbjct: 94351 aagtcaataaataaaaaaataata 94328
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence Length = 197546 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 9906 aagtaaataaataaaacaataata 9929
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 ttaattacccccataaaattcatcatat 53 |||||| |||||||||||| |||||||| Sbjct: 3254160 ttaatttcccccataaaatccatcatat 3254187
>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190211 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcaataaataaaacaataat 145 |||||||||||||||||||| Sbjct: 44283 tcaataaataaaacaataat 44302
>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete sequence Length = 156034 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caataaataaaacaataata 146 |||||||||||||||||||| Sbjct: 130724 caataaataaaacaataata 130743
>gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, complete sequence Length = 168611 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tcaataaataaaacaataat 145 |||||||||||||||||||| Sbjct: 149868 tcaataaataaaacaataat 149887
>gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complete sequence Length = 218532 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 211536 aagtgaataaataaaacaataata 211513
>gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complete sequence Length = 229988 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 40446 aagtgaataaataaaacaataata 40469
>gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, complete sequence Length = 215490 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 aagtcaataaataaaacaataata 146 |||| ||||||||||||||||||| Sbjct: 145769 aagtgaataaataaaacaataata 145746
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 ctcacaaaacgcatcaagtcaata 131 ||||||||||| |||||||||||| Sbjct: 121273 ctcacaaaacgtatcaagtcaata 121296
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcaggcgctcgccccggcca 312 |||||||||||||||||||| Sbjct: 49258 gcaggcgctcgccccggcca 49239
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete sequence Length = 184866 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tacatccacacatagacatg 80 |||||||||||||||||||| Sbjct: 18856 tacatccacacatagacatg 18837
>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete sequence Length = 205436 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 129 ataaataaaacaataatacgtaaatcaacatt 160 |||||||||||||| ||| |||||||||||| Sbjct: 69099 ataaataaaacaattataattaaatcaacatt 69068
>gb|M23964.1|MUSPGK1PS4 Mus musculus phosphoglycerate kinase (Pgk1-ps4) processed pseudogene Length = 1648 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 ctcacaaaacgcatcaagtcaata 131 ||||||||||| |||||||||||| Sbjct: 876 ctcacaaaacgtatcaagtcaata 853 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,038,007 Number of Sequences: 3902068 Number of extensions: 5038007 Number of successful extensions: 125821 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124509 Number of HSP's gapped (non-prelim): 1282 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
