Clone Information

BLAST Search Result

Clone Name	rbasd13m12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS4_MAIZE (O22424) 40S ribosomal protein S4	206	4e-53
2	RS4_SOLTU (P46300) 40S ribosomal protein S4	202	7e-52
3	RS4_PRUAR (O81363) 40S ribosomal protein S4	201	1e-51
4	RS4_GOSHI (P46299) 40S ribosomal protein S4	199	5e-51
5	RS4_ARATH (P49204) 40S ribosomal protein S4	197	2e-50
6	RS4_XENTR (Q6PBC4) 40S ribosomal protein S4	160	2e-39
7	RS4_XENLA (P49401) 40S ribosomal protein S4	160	2e-39
8	RS4_CRIGR (P47961) 40S ribosomal protein S4	160	2e-39
9	RS4_CHICK (P47836) 40S ribosomal protein S4	160	2e-39
10	RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform	160	2e-39
11	RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform	160	2e-39
12	RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform	160	2e-39
13	RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform	160	2e-39
14	RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single ...	160	2e-39
15	RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform	160	2e-39
16	RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform	160	2e-39
17	RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform	159	7e-39
18	RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1	157	2e-38
19	RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform	157	3e-38
20	RS4_ICTPU (Q90YS0) 40S ribosomal protein S4	154	1e-37
21	RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1	154	2e-37
22	RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1	152	6e-37
23	RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1	151	1e-36
24	RS4_DROME (P41042) 40S ribosomal protein S4	151	1e-36
25	RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1	150	3e-36
26	RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1	150	3e-36
27	RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1	149	4e-36
28	RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B	149	4e-36
29	RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2	149	5e-36
30	RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C	149	7e-36
31	RS4A_SCHPO (P87158) 40S ribosomal protein S4-A	149	7e-36
32	RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2	148	9e-36
33	RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)	142	5e-34
34	RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)	139	7e-33
35	RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)	138	1e-32
36	RS4_DICDI (P51405) 40S ribosomal protein S4	127	3e-29
37	RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4	121	1e-27
38	RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)	101	1e-21
39	RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)	97	2e-20
40	RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)	97	2e-20
41	FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (...	33	0.44
42	YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)	33	0.57
43	RS4_CHLS6 (Q40941) 40S ribosomal protein S4	31	2.2
44	Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977	31	2.2
45	LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3....	31	2.8
46	YCGV_ECO57 (Q8X583) Hypothetical protein ycgV	30	4.8
47	MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)	30	6.3
48	XYL1_CANSH (Q9P430) NAD(P)H-dependent D-xylose reductase (EC 1.1...	29	8.2

>RS4_MAIZE (O22424) 40S ribosomal protein S4|
          Length = 265

 Score =  206 bits (524), Expect = 4e-53
 Identities = 101/125 (80%), Positives = 106/125 (84%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           GQKGIPYLNTYDGRTIRYPDPLIKANDTIK+DLETNKIVDFIKFD               
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VIKNREKHKG+FETIHVED+ GHQFATR+GNVFTIGKG KPWVSLPKGKGIKL+IIEE
Sbjct: 192 VGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEE 251

Query: 209 QRKRD 195
           QRKRD
Sbjct: 252 QRKRD 256

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>RS4_SOLTU (P46300) 40S ribosomal protein S4|
          Length = 264

 Score =  202 bits (513), Expect = 7e-52
 Identities = 97/124 (78%), Positives = 106/124 (85%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFD               
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VIKNREKHKG+FET+H++D+QGH+FATRLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+
Sbjct: 192 VGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIED 251

Query: 209 QRKR 198
            RKR
Sbjct: 252 ARKR 255

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>RS4_PRUAR (O81363) 40S ribosomal protein S4|
          Length = 261

 Score =  201 bits (511), Expect = 1e-51
 Identities = 98/124 (79%), Positives = 104/124 (83%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           GQKGIPY+NTYDGRTIRYPDPLIKANDTIKLDLETNKI DFIKFD               
Sbjct: 128 GQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGR 187

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VIKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPKGKGIKLTI+EE
Sbjct: 188 VGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEE 247

Query: 209 QRKR 198
            +KR
Sbjct: 248 AKKR 251

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>RS4_GOSHI (P46299) 40S ribosomal protein S4|
          Length = 262

 Score =  199 bits (506), Expect = 5e-51
 Identities = 99/124 (79%), Positives = 104/124 (83%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLE+NKIVDFIKFD               
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VIKNREKHKG+FETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPK KGIKL+IIEE
Sbjct: 192 VGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEE 251

Query: 209 QRKR 198
            RKR
Sbjct: 252 ARKR 255

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>RS4_ARATH (P49204) 40S ribosomal protein S4|
          Length = 262

 Score =  197 bits (500), Expect = 2e-50
 Identities = 96/124 (77%), Positives = 103/124 (83%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           GQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKIV+FIKFD               
Sbjct: 132 GQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VIKNREKHKG+FETIH++D+ GH+FATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEE
Sbjct: 192 VGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEE 251

Query: 209 QRKR 198
            RKR
Sbjct: 252 ARKR 255

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>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_XENLA (P49401) 40S ribosomal protein S4|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_CRIGR (P47961) 40S ribosomal protein S4|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_CHICK (P47836) 40S ribosomal protein S4|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant|
           mRNA protein) (SCR10)
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  160 bits (405), Expect = 2e-39
 Identities = 76/124 (61%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  159 bits (401), Expect = 7e-39
 Identities = 76/124 (61%), Positives = 90/124 (72%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G K IP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 131 GTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE
Sbjct: 191 IGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  157 bits (397), Expect = 2e-38
 Identities = 74/122 (60%), Positives = 90/122 (73%)
 Frame = -3

Query: 563 KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXX 384
           KGIP+L T+D RTIRYPDPLIK NDT++++LET KI DFIKFD                 
Sbjct: 133 KGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIG 192

Query: 383 VIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQR 204
           VI NREKH G+F+ +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ 
Sbjct: 193 VITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD 252

Query: 203 KR 198
           KR
Sbjct: 253 KR 254

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>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform|
          Length = 262

 Score =  157 bits (396), Expect = 3e-38
 Identities = 74/124 (59%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DL+T KI DFIKF+               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NREKH G+F+ +HV+D+ G+ FATRL N+F IGKG KPWVSLP+GKG++LTI EE
Sbjct: 191 IGVITNREKHPGSFDVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4|
          Length = 262

 Score =  154 bits (390), Expect = 1e-37
 Identities = 72/124 (58%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IKANDT+++DLET KI +FIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+D+ G+ FATRL N+F IGKG K WVS+P+GKGI+LTI EE
Sbjct: 191 IGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  154 bits (388), Expect = 2e-37
 Identities = 71/124 (57%), Positives = 90/124 (72%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI++FIKFD               
Sbjct: 131 GMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE
Sbjct: 191 VGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  152 bits (384), Expect = 6e-37
 Identities = 70/124 (56%), Positives = 90/124 (72%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD               
Sbjct: 131 GVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE
Sbjct: 191 VGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  151 bits (382), Expect = 1e-36
 Identities = 69/124 (55%), Positives = 90/124 (72%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD               
Sbjct: 131 GVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE
Sbjct: 191 VGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_DROME (P41042) 40S ribosomal protein S4|
          Length = 261

 Score =  151 bits (381), Expect = 1e-36
 Identities = 68/124 (54%), Positives = 91/124 (73%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KG+P+L T+DGRTIRYPDPLI AND++++D+ + KI D+IKFD               
Sbjct: 132 GAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              + NRE+H G+F+ +H++D+QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE
Sbjct: 192 VGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEE 251

Query: 209 QRKR 198
           + KR
Sbjct: 252 RDKR 255

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>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  150 bits (378), Expect = 3e-36
 Identities = 69/124 (55%), Positives = 89/124 (71%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD               
Sbjct: 131 GVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E
Sbjct: 191 VGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  150 bits (378), Expect = 3e-36
 Identities = 69/124 (55%), Positives = 89/124 (71%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IK NDT+++DL T KI++FIKFD               
Sbjct: 131 GVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+  E
Sbjct: 191 VGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1|
          Length = 262

 Score =  149 bits (377), Expect = 4e-36
 Identities = 69/124 (55%), Positives = 88/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDP+IK NDT+++DL + KI  FIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+F+ +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE
Sbjct: 191 VGVITNRERHPGSFDVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B|
          Length = 262

 Score =  149 bits (377), Expect = 4e-36
 Identities = 73/124 (58%), Positives = 87/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI  FIKFD               
Sbjct: 132 GAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE
Sbjct: 192 VGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEE 251

Query: 209 QRKR 198
           + +R
Sbjct: 252 RDRR 255

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>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score =  149 bits (376), Expect = 5e-36
 Identities = 70/124 (56%), Positives = 87/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI  FIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             VI NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE
Sbjct: 191 VGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C|
          Length = 262

 Score =  149 bits (375), Expect = 7e-36
 Identities = 73/124 (58%), Positives = 87/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI  FIKFD               
Sbjct: 132 GAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE
Sbjct: 192 VGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEE 251

Query: 209 QRKR 198
           + +R
Sbjct: 252 RDRR 255

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>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A|
          Length = 262

 Score =  149 bits (375), Expect = 7e-36
 Identities = 73/124 (58%), Positives = 87/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KG+P+L T+DGRTIRYPDPLIK NDTIKL+LETNKI  FIKFD               
Sbjct: 132 GAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              I +RE H G+FE IHV+DA   +FATRL NVF IG+  K W+SLPKGKG+KL+I EE
Sbjct: 192 VGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEE 251

Query: 209 QRKR 198
           + +R
Sbjct: 252 RDRR 255

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>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2|
          Length = 262

 Score =  148 bits (374), Expect = 9e-36
 Identities = 69/124 (55%), Positives = 87/124 (70%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDT+++DL T KI  FIKFD               
Sbjct: 131 GTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
             V+ NRE+H G+ + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE
Sbjct: 191 VGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEE 250

Query: 209 QRKR 198
           + KR
Sbjct: 251 RDKR 254

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>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)|
          Length = 260

 Score =  142 bits (359), Expect = 5e-34
 Identities = 68/124 (54%), Positives = 86/124 (69%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G+KGIPYL T+DGRTIRYPDPLIK NDT+K+DL T KI  F+KF+               
Sbjct: 132 GKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              I +RE+H+G F+ +H++DA  +QF TRL NVF IG+G K  +SLPKGKGIKL+I EE
Sbjct: 192 VGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEE 251

Query: 209 QRKR 198
           +  R
Sbjct: 252 RDAR 255

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>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)|
          Length = 262

 Score =  139 bits (349), Expect = 7e-33
 Identities = 70/125 (56%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G+KG+PY+ T+DGRTIRYPDPLI+ANDT+K+DL T KI  FIKFD               
Sbjct: 132 GKKGVPYVVTHDGRTIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGR 191

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIG-KGTKPWVSLPKGKGIKLTIIE 213
             VI +REK +G F+ +H++DA  + F TRL NVF IG +  KPWVSLPKGKGIKL+I E
Sbjct: 192 VGVIVHREKLEGGFDLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISE 251

Query: 212 EQRKR 198
           E+ +R
Sbjct: 252 ERDRR 256

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>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)|
          Length = 260

 Score =  138 bits (347), Expect = 1e-32
 Identities = 64/124 (51%), Positives = 86/124 (69%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G+KG+PY+ T+DGRTIRYPDP IK NDT+K+DL + KI DFIKFD               
Sbjct: 131 GKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              I ++E+H G F+ +H++D+  + F TRL NVF IG+  KP++SLPKGKGIKL+I EE
Sbjct: 191 IGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEE 250

Query: 209 QRKR 198
           + +R
Sbjct: 251 RDRR 254

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>RS4_DICDI (P51405) 40S ribosomal protein S4|
          Length = 266

 Score =  127 bits (318), Expect = 3e-29
 Identities = 59/121 (48%), Positives = 81/121 (66%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G +GIPY++T DGRTIRYPDP I  +DTIK+D+E+ KI  FI F+               
Sbjct: 131 GNQGIPYVHTDDGRTIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGR 190

Query: 389 XXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEE 210
              + +REKH G+F+ +HV D  GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E
Sbjct: 191 VGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDE 250

Query: 209 Q 207
           +
Sbjct: 251 R 251

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>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4|
          Length = 259

 Score =  121 bits (304), Expect = 1e-27
 Identities = 60/122 (49%), Positives = 77/122 (63%)
 Frame = -3

Query: 563 KGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXX 384
           KG+P L T DGRTIRYPDP +K NDTI  ++ T KI D +KF+                 
Sbjct: 133 KGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVG 192

Query: 383 VIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQR 204
           +I +RE+  G  + IH++D+ GH FATR+ NVF IGKG K  VSLP G GI+L+I EE+ 
Sbjct: 193 IIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERD 252

Query: 203 KR 198
           KR
Sbjct: 253 KR 254

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>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)|
          Length = 268

 Score =  101 bits (252), Expect = 1e-21
 Identities = 62/131 (47%), Positives = 73/131 (55%), Gaps = 12/131 (9%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLI------------KANDTIKLDLETNKIVDFIKFDXXX 426
           GQKGIPYLNTY   T  Y   +             ++ D  +L L    ++     D   
Sbjct: 132 GQKGIPYLNTYVVPTDTYMATIATRPTSGKRHNQDRSGDQQELRLHQGLMLAMCHGDWRR 191

Query: 425 XXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLP 246
                           + + + KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLP
Sbjct: 192 NTAVWCD---------QQQGEAKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLP 242

Query: 245 KGKGIKLTIIE 213
           KGKGIKL+IIE
Sbjct: 243 KGKGIKLSIIE 253



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = -2

Query: 498 GQRHHQARPGDQQDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 352
           G+RH+Q R GDQQ+  LHQ       HGD W ++ A WCDQ+QGEA G+
Sbjct: 160 GKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207

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>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 56/82 (68%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 113 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 172

Query: 389 XXVIKNREKHKGTFETIHVEDA 324
             VI NRE+H G+F+ +HV+DA
Sbjct: 173 IGVITNRERHPGSFDVVHVKDA 194

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>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)|
          Length = 194

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 47/82 (57%), Positives = 56/82 (68%)
 Frame = -3

Query: 569 GQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXX 390
           G KGIP+L T+D RTIRYPDPLIK NDTI++DLET KI DFIKFD               
Sbjct: 113 GTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGR 172

Query: 389 XXVIKNREKHKGTFETIHVEDA 324
             VI NRE+H G+F+ +HV+DA
Sbjct: 173 IGVITNRERHPGSFDVVHVKDA 194

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>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin|
           resistance protein)
          Length = 154

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -3

Query: 380 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 240
           +K R++H+G  ++I+  D  GH+F    G+VF      +  KP +S  +G
Sbjct: 95  LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144

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>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 33.1 bits (74), Expect = 0.57
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +3

Query: 336 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELDGV 491
           ++ LK +  L+P  D    H N  +VA T H   + D+  D+++N V ++ E D +
Sbjct: 72  IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127

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>RS4_CHLS6 (Q40941) 40S ribosomal protein S4|
          Length = 242

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 23/98 (23%), Positives = 40/98 (40%)
 Frame = -3

Query: 542 TYDGRTIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREK 363
           T D R ++     IK  D++ +    ++IV  +KF+                 VIK   K
Sbjct: 141 TDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRK 200

Query: 362 HKGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSL 249
            K   + IH+E   G +   +  ++  IG+     +SL
Sbjct: 201 TKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238

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>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977|
          Length = 199

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
 Frame = +3

Query: 279 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 368
           NG H      V + GGKL  +G+L  D LKGSL +L
Sbjct: 36  NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71

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>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
           (Late nodulin 56) (N-56)
          Length = 565

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -3

Query: 365 KHKGTFETIHVEDAQGHQFATRLGNV 288
           KHKGT+ETI  E+  GH+  TR+G V
Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369

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>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV|
          Length = 547

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 356 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 258
           GTF T++VE+  G+       +V   G G KPW
Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546

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>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 310

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 309 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQV 476
           KL  LGI  VDG+   L +  P LD   TP    + HHD   D+++D+  +L    V
Sbjct: 85  KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138

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>XYL1_CANSH (Q9P430) NAD(P)H-dependent D-xylose reductase (EC 1.1.1.-) (XR)|
          Length = 323

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = +3

Query: 306 GKLVTLGILNVDGLKGSLMLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELD 485
           GK+ ++G+ N     G+L+L      T  P+V    HH  +   KL E    VG+ V   
Sbjct: 162 GKIRSIGVSN---FPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITVTAY 218

Query: 486 GVVGLDEWVWVADGAAI 536
              G   +V +  G A+
Sbjct: 219 SSFGPQSFVEMNQGRAL 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,931,016
Number of Sequences: 219361
Number of extensions: 1655204
Number of successful extensions: 4744
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 4542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4708
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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