ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_197752.1| Oryza sativa (japonica cultivar-group) unknown ... 161 4e-36
2gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 161 4e-36
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
4dbj|AK103006.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
5dbj|AK071105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
6dbj|AK060104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 161 4e-36
8dbj|AK101939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
9gb|AY107859.1| Zea mays PCO076568 mRNA sequence 121 3e-24
10emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 42 2.5
11gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 2.5
12gb|AC055717.36| Homo sapiens 12 BAC RP11-572C21 (Roswell Park Ca... 42 2.5
13ref|NM_209025.1| Eremothecium gossypii ACR270Wp (ACR270W), mRNA 42 2.5
14emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chr... 42 2.5
15gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, com... 40 9.9
16gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 9.9
17gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Canc... 40 9.9
18gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome... 40 9.9
19gb|DQ167204.1| Zea mays dual-specificity protein-like phosphatas... 40 9.9
20gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosom... 40 9.9
21gb|AC122292.4| Mus musculus BAC clone RP23-256J8 from 10, comple... 40 9.9
22emb|AL591115.6| Human DNA sequence from clone RP11-314E23 on chr... 40 9.9
23emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 9.9
24gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosom... 40 9.9
25gb|AC018362.8| Homo sapiens chromosome 15 clone RP11-265N6 map 1... 40 9.9
26gb|AC092484.1|AC092484 Homo sapiens clone RP11-114K22, complete ... 40 9.9
27gb|AC018694.4|AC018694 Homo sapiens BAC clone RP11-563P16 from 1... 40 9.9
28dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
30dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
31dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.9
32emb|AJ634062.2| Bacillus amyloliquefaciens dif gene cluster dire... 40 9.9
33gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, comple... 40 9.9
34gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl... 40 9.9

>ref|NM_197752.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBb0089A17.7), mRNA
          Length = 1485

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Minus

                                                                        
Query: 327  ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
            |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 1122 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 1063

                                                                        
Query: 387  gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
            |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 1062 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 1003

                                                                        
Query: 447  aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
             ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 1002 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 943

                     
Query: 507  agcaaggaa 515
             ||||||||
Sbjct: 942  ggcaaggaa 934



 Score =  105 bits (53), Expect = 2e-19
 Identities = 120/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 582 tttcttcactctaagctggtagaattcctggacagctttccattgtgccgacgccaataa 641
           ||||||||| |||||||||||||||| ||  ||||| | ||  ||||| || || |||| 
Sbjct: 885 tttcttcaccctaagctggtagaattgctcaacagcctgccgctgtgcagaagctaatag 826

                                                                       
Query: 642 cacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttggtttgt 701
           ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| ||||||
Sbjct: 825 cacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-gtttgt 767

                                
Query: 702 attgcaccaagtagcaaagaa 722
           |||||||||||||||||||||
Sbjct: 766 attgcaccaagtagcaaagaa 746



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
            ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 1464 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 1408

                                                              
Query: 88   tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
            || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 1407 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 1358



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 247  tgctccgcctcaagagagcagctctcactacccacgct 284
            ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 1220 tgctctgcctcaagggagcagctctcgctccccacgct 1183



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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
             sequence
          Length = 132927

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Plus

                                                                         
Query: 327   ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
             |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 73872 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 73931

                                                                         
Query: 387   gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
             |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 73932 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 73991

                                                                         
Query: 447   aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
              ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 73992 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 74051

                      
Query: 507   agcaaggaa 515
              ||||||||
Sbjct: 74052 ggcaaggaa 74060



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                         
Query: 637   aataacacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttgg 696
             |||| ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| |
Sbjct: 74654 aatagcacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-g 74712

                          
Query: 697   tttgtattgcacc 709
             |||||||||||||
Sbjct: 74713 tttgtattgcacc 74725



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Plus

                                                                         
Query: 28    tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
             ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 73530 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 73586

                                                               
Query: 88    tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
             || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 73587 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 73636



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 582   tttcttcactctaagctggtagaatt 607
             ||||||||| ||||||||||||||||
Sbjct: 74109 tttcttcaccctaagctggtagaatt 74134



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 247   tgctccgcctcaagagagcagctctcactacccacgct 284
             ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 73774 tgctctgcctcaagggagcagctctcgctccccacgct 73811



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Plus

                                                                            
Query: 327      ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
                |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 21641968 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 21642027

                                                                            
Query: 387      gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
                |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 21642028 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 21642087

                                                                            
Query: 447      aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
                 ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 21642088 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 21642147

                         
Query: 507      agcaaggaa 515
                 ||||||||
Sbjct: 21642148 ggcaaggaa 21642156



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                            
Query: 637      aataacacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttgg 696
                |||| ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| |
Sbjct: 21642750 aatagcacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-g 21642808

                             
Query: 697      tttgtattgcacc 709
                |||||||||||||
Sbjct: 21642809 tttgtattgcacc 21642821



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Plus

                                                                            
Query: 28       tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
                ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 21641626 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 21641682

                                                                  
Query: 88       tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
                || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 21641683 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 21641732



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 582      tttcttcactctaagctggtagaatt 607
                ||||||||| ||||||||||||||||
Sbjct: 21642205 tttcttcaccctaagctggtagaatt 21642230



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 247      tgctccgcctcaagagagcagctctcactacccacgct 284
                ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 21641870 tgctctgcctcaagggagcagctctcgctccccacgct 21641907



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>dbj|AK103006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116I08, full
            insert sequence
          Length = 1420

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Minus

                                                                        
Query: 327  ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
            |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 1181 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 1122

                                                                        
Query: 387  gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
            |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 1121 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 1062

                                                                        
Query: 447  aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
             ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 1061 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 1002

                     
Query: 507  agcaaggaa 515
             ||||||||
Sbjct: 1001 ggcaaggaa 993



 Score =  105 bits (53), Expect = 2e-19
 Identities = 120/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 582 tttcttcactctaagctggtagaattcctggacagctttccattgtgccgacgccaataa 641
           ||||||||| |||||||||||||||| ||  ||||| | ||  ||||| || || |||| 
Sbjct: 944 tttcttcaccctaagctggtagaattgctcaacagcctgccgctgtgcagaagctaatag 885

                                                                       
Query: 642 cacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttggtttgt 701
           ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| ||||||
Sbjct: 884 cacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-gtttgt 826

                                
Query: 702 attgcaccaagtagcaaagaa 722
           |||||||||||||||||||||
Sbjct: 825 attgcaccaagtagcaaagaa 805



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 247  tgctccgcctcaagagagcagctctcactacccacgct 284
            ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 1279 tgctctgcctcaagggagcagctctcgctccccacgct 1242



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>dbj|AK071105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077B12, full
           insert sequence
          Length = 1212

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Minus

                                                                       
Query: 327 ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
           |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 856 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 797

                                                                       
Query: 387 gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
           |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 796 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 737

                                                                       
Query: 447 aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
            ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 736 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 677

                    
Query: 507 agcaaggaa 515
            ||||||||
Sbjct: 676 ggcaaggaa 668



 Score =  105 bits (53), Expect = 2e-19
 Identities = 120/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 582 tttcttcactctaagctggtagaattcctggacagctttccattgtgccgacgccaataa 641
           ||||||||| |||||||||||||||| ||  ||||| | ||  ||||| || || |||| 
Sbjct: 619 tttcttcaccctaagctggtagaattgctcaacagcctgccgctgtgcagaagctaatag 560

                                                                       
Query: 642 cacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttggtttgt 701
           ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| ||||||
Sbjct: 559 cacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-gtttgt 501

                                
Query: 702 attgcaccaagtagcaaagaa 722
           |||||||||||||||||||||
Sbjct: 500 attgcaccaagtagcaaagaa 480



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
            ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 1198 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 1142

                                                              
Query: 88   tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
            || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 1141 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 1092



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 247 tgctccgcctcaagagagcagctctcactacccacgct 284
           ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 954 tgctctgcctcaagggagcagctctcgctccccacgct 917



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>dbj|AK060104.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B05, full
           insert sequence
          Length = 1034

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Minus

                                                                       
Query: 327 ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
           |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 670 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 611

                                                                       
Query: 387 gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
           |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 610 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 551

                                                                       
Query: 447 aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
            ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 550 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 491

                    
Query: 507 agcaaggaa 515
            ||||||||
Sbjct: 490 ggcaaggaa 482



 Score =  105 bits (53), Expect = 2e-19
 Identities = 120/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                       
Query: 582 tttcttcactctaagctggtagaattcctggacagctttccattgtgccgacgccaataa 641
           ||||||||| |||||||||||||||| ||  ||||| | ||  ||||| || || |||| 
Sbjct: 433 tttcttcaccctaagctggtagaattgctcaacagcctgccgctgtgcagaagctaatag 374

                                                                       
Query: 642 cacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttggtttgt 701
           ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| ||||||
Sbjct: 373 cacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-gtttgt 315

                                
Query: 702 attgcaccaagtagcaaagaa 722
           |||||||||||||||||||||
Sbjct: 314 attgcaccaagtagcaaagaa 294



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
            ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 1012 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 956

                                                              
Query: 88   tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
            || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 955  tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 906



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 247 tgctccgcctcaagagagcagctctcactacccacgct 284
           ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 768 tgctctgcctcaagggagcagctctcgctccccacgct 731



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  161 bits (81), Expect = 4e-36
 Identities = 162/189 (85%)
 Strand = Plus / Plus

                                                                            
Query: 327      ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
                |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 21653631 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 21653690

                                                                            
Query: 387      gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
                |||||| |||||||| ||||||||||| ||||| ||||||  |||||||| |||||||||
Sbjct: 21653691 gcttatctcccacaagccactgcccacgttaacggccaaggtatccgcatcatacccttc 21653750

                                                                            
Query: 447      aaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgagt 506
                 ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| |||||
Sbjct: 21653751 gaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgagt 21653810

                         
Query: 507      agcaaggaa 515
                 ||||||||
Sbjct: 21653811 ggcaaggaa 21653819



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 63/73 (86%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                            
Query: 637      aataacacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttgg 696
                |||| ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| |
Sbjct: 21654413 aatagcacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-g 21654471

                             
Query: 697      tttgtattgcacc 709
                |||||||||||||
Sbjct: 21654472 tttgtattgcacc 21654484



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Plus

                                                                            
Query: 28       tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
                ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 21653289 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 21653345

                                                                  
Query: 88       tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
                || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 21653346 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 21653395



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 582      tttcttcactctaagctggtagaatt 607
                ||||||||| ||||||||||||||||
Sbjct: 21653868 tttcttcaccctaagctggtagaatt 21653893



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 247      tgctccgcctcaagagagcagctctcactacccacgct 284
                ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 21653533 tgctctgcctcaagggagcagctctcgctccccacgct 21653570



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>dbj|AK101939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074H15, full
            insert sequence
          Length = 1631

 Score =  155 bits (78), Expect = 2e-34
 Identities = 163/190 (85%), Gaps = 1/190 (0%)
 Strand = Plus / Minus

                                                                        
Query: 327  ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
            |||||||||||| ||||||||||| || |||||||| |||||||| || |||||||||| 
Sbjct: 1254 ccacaggtatgagaaccctgcaaaggccgcctggctcgcaaactgcacgcggtatactag 1195

                                                                        
Query: 387  gcttatttcccacaaa-ccactgcccacattaactgccaagccatccgcattataccctt 445
            |||||| ||||||||| ||||||||||| ||||| ||||||  |||||||| ||||||||
Sbjct: 1194 gcttatctcccacaaagccactgcccacgttaacggccaaggtatccgcatcataccctt 1135

                                                                        
Query: 446  caaggtctgactcagagaccatcacgaatgtcttctcatcaaaagtgatgaggttccgag 505
            | ||||| || |  || ||||| |||||||||||||| ||||| |  |||||||| ||||
Sbjct: 1134 cgaggtccgatttggaaaccatgacgaatgtcttctcgtcaaatgcaatgaggttgcgag 1075

                      
Query: 506  tagcaaggaa 515
            | ||||||||
Sbjct: 1074 tggcaaggaa 1065



 Score =  105 bits (53), Expect = 2e-19
 Identities = 120/141 (85%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                        
Query: 582  tttcttcactctaagctggtagaattcctggacagctttccattgtgccgacgccaataa 641
            ||||||||| |||||||||||||||| ||  ||||| | ||  ||||| || || |||| 
Sbjct: 1016 tttcttcaccctaagctggtagaattgctcaacagcctgccgctgtgcagaagctaatag 957

                                                                        
Query: 642  cacccttggcctgcatgaccgaacatgttcaaaagctccagcaggcgtcatttggtttgt 701
            ||||||||||||||   | |||||||||||| ||||| |||| || ||||||| ||||||
Sbjct: 956  cacccttggcctgcgcaagcgaacatgttcataagcttcagccggagtcattt-gtttgt 898

                                 
Query: 702  attgcaccaagtagcaaagaa 722
            |||||||||||||||||||||
Sbjct: 897  attgcaccaagtagcaaagaa 877



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 92/110 (83%), Gaps = 6/110 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   tttacctttgtacacgtagcagtcaacttattacagcacatatatacagacccgagcaac 87
            ||||||| |||||| |||| ||||||||||||||||   |||| |||| |||| ||||||
Sbjct: 1596 tttacctctgtacatgtagaagtcaacttattacag---atatgtacatacccaagcaac 1540

                                                              
Query: 88   tgaactccttggttgct--gcagactggagtcgagg-cttcacattgcat 134
            || |||| ||| |||||  | ||||||||||  ||| |||||||||||||
Sbjct: 1539 tgcactctttgcttgctgaggagactggagttaaggacttcacattgcat 1490



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 247  tgctccgcctcaagagagcagctctcactacccacgct 284
            ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 1352 tgctctgcctcaagggagcagctctcgctccccacgct 1315



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>gb|AY107859.1| Zea mays PCO076568 mRNA sequence
          Length = 1538

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                        
Query: 327  ccacaggtatgaaaaccctgcaaatgctgcctggctggcaaactgaacacggtatactaa 386
            |||||| || |||||||| |||||||||| || ||| |||||||| ||||||||||  ||
Sbjct: 1188 ccacagatacgaaaacccagcaaatgctgtcttgctcgcaaactggacacggtatatcaa 1129

                                                                        
Query: 387  gcttatttcccacaaaccactgcccacattaactgccaagccatccgcattatacccttc 446
            |||||| |||||||| | |||||||| ||||| |||||   |||| ||||||||||||||
Sbjct: 1128 gcttatctcccacaatctactgcccatattaagtgccagtgcatctgcattatacccttc 1069

                                         
Query: 447  aaggtctgactcagagaccatcacgaatg 475
             |||||||| || ||||||||||| ||||
Sbjct: 1068 gaggtctgattctgagaccatcacaaatg 1040



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                        
Query: 37   gtacacgtagcagtcaacttattacagcacatatatacagacccgagcaactgaactcct 96
            ||||||||||||||||||||||||||   |||||||||| ||||||||||||  |||| |
Sbjct: 1457 gtacacgtagcagtcaacttattacatgtcatatatacaaacccgagcaacttcactctt 1398

                          
Query: 97   tggttgctgcagac 110
            ||||||||||||||
Sbjct: 1397 tggttgctgcagac 1384



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 199  ggattaaccacgacaccttgaagtagaca 227
            |||||||||||||||||||| ||||||||
Sbjct: 1310 ggattaaccacgacaccttgcagtagaca 1282



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 664 acatgttcaaaagctccagcaggcgtcatttggtttgtattgcaccaagtagcaaa 719
           ||||||||| ||||| ||||||| ||||| |  ||| ||||||||||| |||||||
Sbjct: 869 acatgttcataagcttcagcaggagtcatatt-tttatattgcaccaaatagcaaa 815



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>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
              sequence
          Length = 278310

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    ggtatgaaaaccctgcaaatg 352
              |||||||||||||||||||||
Sbjct: 123931 ggtatgaaaaccctgcaaatg 123911



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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      ggttgcagtttgagacgatat 25
              |||||||||||||||||||||
Sbjct: 848180 ggttgcagtttgagacgatat 848160



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>gb|AC055717.36| Homo sapiens 12 BAC RP11-572C21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 204425

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 293   gtgcctccttgtccttctggg 313
             |||||||||||||||||||||
Sbjct: 32408 gtgcctccttgtccttctggg 32388



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>ref|NM_209025.1| Eremothecium gossypii ACR270Wp (ACR270W), mRNA
          Length = 2643

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 5    ggttgcagtttgagacgatat 25
            |||||||||||||||||||||
Sbjct: 1854 ggttgcagtttgagacgatat 1834



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>emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chromosome 9, complete
              sequence
          Length = 176845

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 332    ggtatgaaaaccctgcaaatg 352
              |||||||||||||||||||||
Sbjct: 112792 ggtatgaaaaccctgcaaatg 112772



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>gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, complete sequence
          Length = 185956

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    atatcctttacctttgtaca 41
             ||||||||||||||||||||
Sbjct: 68287 atatcctttacctttgtaca 68268



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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 535     acctcctttttaatgattgg 554
               ||||||||||||||||||||
Sbjct: 1545698 acctcctttttaatgattgg 1545717



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>gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 165821

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   tgcaagacaaaaagacaccg 180
             ||||||||||||||||||||
Sbjct: 74791 tgcaagacaaaaagacaccg 74810



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>gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome 10, complete sequence
          Length = 217745

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 664   acatgttcaaaagctccagc 683
             ||||||||||||||||||||
Sbjct: 92747 acatgttcaaaagctccagc 92766



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>gb|DQ167204.1| Zea mays dual-specificity protein-like phosphatase 1 mRNA, complete
           cds
          Length = 678

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 664 acatgttcaaaagctccagcaggcgtcatttggtttgtattgcaccaagtagcaaa 719
           ||||||||| ||||| ||||||| ||||| |  ||| ||||||||||| |||||||
Sbjct: 599 acatgttcataagcttcagcaggagtcatatt-tttatattgcaccaaatagcaaa 545



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>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete
             sequence
          Length = 160122

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 284   tctcggcaagtgcctccttgtccttctg 311
             |||| ||||||| |||||||||||||||
Sbjct: 43143 tctcagcaagtggctccttgtccttctg 43116



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>gb|AC122292.4| Mus musculus BAC clone RP23-256J8 from 10, complete sequence
          Length = 159736

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 664   acatgttcaaaagctccagc 683
             ||||||||||||||||||||
Sbjct: 89033 acatgttcaaaagctccagc 89014



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>emb|AL591115.6| Human DNA sequence from clone RP11-314E23 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 91763

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   tcttctcatcaaaagtgatg 495
             ||||||||||||||||||||
Sbjct: 33001 tcttctcatcaaaagtgatg 32982



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>emb|AL935254.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 3/11
          Length = 317050

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 226    cagtggtgaccgttcgcaggctgc 249
              ||||||||||||||| ||||||||
Sbjct: 138704 cagtggtgaccgttcccaggctgc 138681



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>gb|AC163900.3| Mus musculus BAC clone RP23-151K15 from chromosome 12, complete
             sequence
          Length = 200606

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tccttggttgctgcagactg 112
             ||||||||||||||||||||
Sbjct: 81647 tccttggttgctgcagactg 81666



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>gb|AC018362.8| Homo sapiens chromosome 15 clone RP11-265N6 map 15q15, complete sequence
          Length = 182288

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 568    ttggtgccctgaactttctt 587
              ||||||||||||||||||||
Sbjct: 116120 ttggtgccctgaactttctt 116101



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>gb|AC092484.1|AC092484 Homo sapiens clone RP11-114K22, complete sequence
          Length = 73900

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgcatgccctcttcatatgt 149
             ||||||||||||||||||||
Sbjct: 57684 tgcatgccctcttcatatgt 57665



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>gb|AC018694.4|AC018694 Homo sapiens BAC clone RP11-563P16 from 11, complete sequence
          Length = 196832

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 568   ttggtgccctgaactttctt 587
             ||||||||||||||||||||
Sbjct: 62527 ttggtgccctgaactttctt 62546



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 697      tttgtattgcaccaagtagc 716
                ||||||||||||||||||||
Sbjct: 18930023 tttgtattgcaccaagtagc 18930042



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 541      tttttaatgattgggctgtc 560
                ||||||||||||||||||||
Sbjct: 32286941 tttttaatgattgggctgtc 32286922



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>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0539D10
          Length = 158691

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 541    tttttaatgattgggctgtc 560
              ||||||||||||||||||||
Sbjct: 130954 tttttaatgattgggctgtc 130935



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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A11
          Length = 132352

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   tttttaatgattgggctgtc 560
             ||||||||||||||||||||
Sbjct: 62773 tttttaatgattgggctgtc 62754



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>emb|AJ634062.2| Bacillus amyloliquefaciens dif gene cluster directing synthesis of
             difficidin/oxydifficidin, strain FZB42
          Length = 69641

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   caaaaagacaccgaggaagt 187
             ||||||||||||||||||||
Sbjct: 65227 caaaaagacaccgaggaagt 65246



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>gb|AC139752.4| Mus musculus BAC clone RP24-258K1 from 12, complete sequence
          Length = 189312

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tccttggttgctgcagactg 112
             ||||||||||||||||||||
Sbjct: 27516 tccttggttgctgcagactg 27497



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>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence
          Length = 236246

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 284   tctcggcaagtgcctccttgtccttctg 311
             |||| ||||||| |||||||||||||||
Sbjct: 13894 tctcagcaagtggctccttgtccttctg 13867


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,822,131
Number of Sequences: 3902068
Number of extensions: 5822131
Number of successful extensions: 115397
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 115174
Number of HSP's gapped (non-prelim): 215
length of query: 722
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 699
effective length of database: 17,143,297,704
effective search space: 11983165095096
effective search space used: 11983165095096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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