Clone Name | rbasd14b09 |
---|---|
Clone Library Name | barley_pub |
>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)| Length = 804 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -3 Query: 272 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 165 A I +CT GLG+ W +TA + VV+AC +P Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638
>THT1_SCHPO (Q09684) Nuclear fusion protein tht1| Length = 577 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +3 Query: 117 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 221 RGS C +E+ + W+ S SH++ HL L+ Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148
>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)| Length = 310 Score = 29.3 bits (64), Expect = 2.7 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -3 Query: 170 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 33 VPV+++F+ +AY +D ++ YTH+ P FK+S+K Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159
>NELL2_MOUSE (Q61220) Protein kinase C-binding protein NELL2 precursor (NEL-like| protein 2) (MEL91 protein) Length = 816 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -1 Query: 280 VRMRTLCIVQGLG--WELGMRPLRQLRCVRE 194 V +RT C++ GLG W LG+ P Q+ + E Sbjct: 5 VLLRTFCVILGLGAVWGLGVDPSLQIDVLTE 35
>COA1_SHEEP (Q28559) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)| [Includes: Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -3 Query: 230 DATAEAAQMRTRVVVACYTSVPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVG 51 D AAQ++ + + Y +RM++ G + +AP ID + HV PR +++ Sbjct: 454 DVNLPAAQLQIAMGIPLYRIKDIRMMY-GVSPWGDAP---ID--FENSAHVPCPRGHVIA 507 Query: 50 FKISSK 33 +I+S+ Sbjct: 508 ARITSE 513
>COA1_BOVIN (Q9TTS3) Acetyl-CoA carboxylase 1 (EC 6.4.1.2) (ACC-alpha)| [Includes: Biotin carboxylase (EC 6.3.4.14)] Length = 2346 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = -3 Query: 230 DATAEAAQMRTRVVVACYTSVPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVG 51 D AAQ++ + + Y +RM++ G + +AP ID + HV PR +++ Sbjct: 454 DVNLPAAQLQIAMGIPLYRIKDIRMMY-GVSPWGDAP---ID--FENSAHVPCPRGHVIA 507 Query: 50 FKISSK 33 +I+S+ Sbjct: 508 ARITSE 513 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,894,949 Number of Sequences: 219361 Number of extensions: 801140 Number of successful extensions: 1832 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1805 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1832 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)