ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC... 591 e-166
2emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(E... 563 e-157
3emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-gluc... 547 e-153
4emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS 289 3e-75
5emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA,... 266 4e-68
6gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minici... 46 0.064
7emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase 46 0.064
8gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome ... 42 1.00
9gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 42 1.00
10gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.00
11gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosom... 42 1.00
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.00
13gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like re... 42 1.00
14gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.00
15emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 42 1.00
16gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome... 40 3.9
17gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, comp... 40 3.9
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.9
19gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, comple... 40 3.9
20emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7... 40 3.9
21emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 3.9
22emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b... 40 3.9
23gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 3.9
24gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 3.9
25gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Can... 40 3.9
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
28gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 3.9
29ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal ... 40 3.9
30emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in... 40 3.9
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9 
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
          Length = 6260

 Score =  591 bits (298), Expect = e-166
 Identities = 300/301 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 5759

                                                                        
Query: 61   tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5758 tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 5699

                                                                        
Query: 121  ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5698 ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 5639

                                                                        
Query: 181  caagccactactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttccc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5638 caagccactactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttccc 5579

                                                                        
Query: 241  aacccaagccctgtacaatacataatgtgcgcatacgtacggngtacacgctcttatacg 300
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5578 aacccaagccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg 5519

             
Query: 301  c 301
            |
Sbjct: 5518 c 5518
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>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
          Length = 4643

 Score =  563 bits (284), Expect = e-157
 Identities = 297/301 (98%), Gaps = 3/301 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4408 atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 4349

                                                                        
Query: 61   tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 4289

                                                                        
Query: 121  ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 4229

                                                                        
Query: 181  caagccactactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttccc 240
            ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 caagcc---actactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttccc 4172

                                                                        
Query: 241  aacccaagccctgtacaatacataatgtgcgcatacgtacggngtacacgctcttatacg 300
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4171 aacccaagccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg 4112

             
Query: 301  c 301
            |
Sbjct: 4111 c 4111
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>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
          Length = 4849

 Score =  547 bits (276), Expect = e-153
 Identities = 296/301 (98%), Gaps = 4/301 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4807 atactttattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaata 4748

                                                                        
Query: 61   tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4747 tagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaaggg 4688

                                                                        
Query: 121  ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4687 ggagcgtttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatag 4628

                                                                        
Query: 181  caagccactactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttccc 240
            ||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4627 caagcc---actactcgcgtacg-atctgagctgcctcagcggtcgcatcccaagttccc 4572

                                                                        
Query: 241  aacccaagccctgtacaatacataatgtgcgcatacgtacggngtacacgctcttatacg 300
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4571 aacccaagccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg 4512

             
Query: 301  c 301
            |
Sbjct: 4511 c 4511
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>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS
          Length = 1434

 Score =  289 bits (146), Expect = 3e-75
 Identities = 259/295 (87%), Gaps = 14/295 (4%)
 Strand = Plus / Minus

                                                                        
Query: 7    tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1381 tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagtt- 1323

                                                                        
Query: 67   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 126
            |||  |||||||||||| |||| |||||||| |||||||| |||||| |||||| |||||
Sbjct: 1322 ctacttacgcacacatgtgtgtgcgtatcaaatgcatgatgaatcgacgaagggagagcg 1263

                                                                        
Query: 127  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 186
            ||| ||| |||  ||||||||||| |||||||||  |    ||||||| |||||||| ||
Sbjct: 1262 tttacatctgccccccttccatcgtaaatcatacaca----tacactactatagcaaacc 1207

                                                                        
Query: 187  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 246
            ||||||| |||||||||| ||||||||||||||||||||||| |        ||||||||
Sbjct: 1206 actacta-tcgcgtacgcgtctgagctgcctcagcggtcgcacc--------ccaaccca 1156

                                                                   
Query: 247  agccctgtacaatacataatgtgcgcatacgtacggngtacacgctcttatacgc 301
            |||||||||||||||||||||||| |||||||||||  |||||||||||||||||
Sbjct: 1155 agccctgtacaatacataatgtgcacatacgtacggcatacacgctcttatacgc 1101
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>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS
          Length = 1426

 Score =  266 bits (134), Expect = 4e-68
 Identities = 256/295 (86%), Gaps = 14/295 (4%)
 Strand = Plus / Minus

                                                                        
Query: 7    tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 66
            |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1395 tattattttggacaaattccgtcaaattttgacgaaattttgaaccctacaatatagttc 1336

                                                                        
Query: 67   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 126
             ||  |||||||||||| ||||||||||||| || ||||| |||||| |||||| |||||
Sbjct: 1335 -tacttacgcacacatgtgtgtacgtatcaaatgtatgatgaatcgacgaagggagagcg 1277

                                                                        
Query: 127  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 186
            ||| ||| |||||||||||||||| |||||||||  |    ||||||| || ||||| ||
Sbjct: 1276 tttacatctgcttcccttccatcgtaaatcatacaca----tacactactacagcaaacc 1221

                                                                        
Query: 187  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 246
            ||||||| | |||||||||||||||||||||||||||||||| |        ||||||||
Sbjct: 1220 actacta-tagcgtacgcatctgagctgcctcagcggtcgcacc--------ccaaccca 1170

                                                                   
Query: 247  agccctgtacaatacataatgtgcgcatacgtacggngtacacgctcttatacgc 301
            | |||||||||||||||||||||| ||||||||| |  |||||||||||||||||
Sbjct: 1169 aaccctgtacaatacataatgtgcacatacgtaccgcatacacgctcttatacgc 1115
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>gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minicircle DNA, partial
           sequence
          Length = 322

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 29  caagttttgacgaaattttgaacccta 55
           |||||||| ||||||||||||||||||
Sbjct: 263 caagttttcacgaaattttgaacccta 237
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>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase
          Length = 1448

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 38/42 (90%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 260  acataatgtgcgcatacgtacggngtacacgctcttatacgc 301
            ||||||||||| ||||||||| | |||||||| |||||||||
Sbjct: 1139 acataatgtgcacatacgtac-gcgtacacgcccttatacgc 1099
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>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     aattttgaaccctacaatata 62
              |||||||||||||||||||||
Sbjct: 195991 aattttgaaccctacaatata 196011
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>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   caatacataatgtgcgcatac 276
             |||||||||||||||||||||
Sbjct: 45217 caatacataatgtgcgcatac 45237
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 227   catcccaagttcccaacccaa 247
             |||||||||||||||||||||
Sbjct: 25470 catcccaagttcccaacccaa 25490
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>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence
          Length = 174507

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     aattttgaaccctacaatata 62
              |||||||||||||||||||||
Sbjct: 159500 aattttgaaccctacaatata 159480
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     catcccaagttcccaacccaa 247
               |||||||||||||||||||||
Sbjct: 3431515 catcccaagttcccaacccaa 3431535
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>gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like repeat region
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 227 catcccaagttcccaacccaa 247
           |||||||||||||||||||||
Sbjct: 825 catcccaagttcccaacccaa 805
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 227     catcccaagttcccaacccaa 247
               |||||||||||||||||||||
Sbjct: 3440219 catcccaagttcccaacccaa 3440239
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
              sequence
          Length = 182054

 Score = 42.1 bits (21), Expect = 1.00
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 256    caatacataatgtgcgcatac 276
              |||||||||||||||||||||
Sbjct: 176184 caatacataatgtgcgcatac 176164
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>gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome 12, complete sequence
          Length = 190088

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     actttattattttggacaaa 22
             ||||||||||||||||||||
Sbjct: 57061 actttattattttggacaaa 57042
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>gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, complete sequence
          Length = 203141

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ccaagttcccaacccaagcc 250
             ||||||||||||||||||||
Sbjct: 97502 ccaagttcccaacccaagcc 97521
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      tcccaagttcccaacccaag 248
                ||||||||||||||||||||
Sbjct: 34127748 tcccaagttcccaacccaag 34127729
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>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence
          Length = 164194

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    accctacaatatagttccta 69
             ||||||||||||||||||||
Sbjct: 94347 accctacaatatagttccta 94366
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>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1
              Contains a zinc-finger protein pseudogene and a novel
              pseudogene, complete sequence
          Length = 129723

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    tcccaagttcccaacccaag 248
              ||||||||||||||||||||
Sbjct: 114305 tcccaagttcccaacccaag 114324
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>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
              Vamp2 gene for vesicle-associated membrane 2, the Per1 gene
              for period homolog 1 (Drosophila), the Hes7 gene for hairy
              and enhancer of split 7 (Drosophila), the Aloxe3 gene for
              arachidonate lipoxygenase 3, the Alox12b gene for
              arachidonate 12-lipoxygenase 12R type, the Alox15b gene for
              arachidonate 15-lipoxygenase second type, the Gucy2e gene
              for guanylate cyclase 2e, a novel gene, the gene for
              LYST-interacting protein LIP8 (Lip8-pending), the gene for
              the likely ortholog of H. sapiens trafficking protein
              particle complex 1 (TRAPPC1)), the Kcnab3 gene for
              potassium voltage-gated channel shaker-related subfamily
              beta member 3, a novel gene, the 3' end of the Chd3 gene
              for chromodomain helicase DNA binding protein 3 and six CpG
              islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaccctacaatatagttcct 68
              ||||||||||||||||||||
Sbjct: 121051 aaccctacaatatagttcct 121070
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>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7
          Length = 281000

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    ccaagttcccaacccaagcc 250
              ||||||||||||||||||||
Sbjct: 125367 ccaagttcccaacccaagcc 125348
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>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     attattttggacaaatttcgtcaa 31
             ||||||||||||||||||| ||||
Sbjct: 22782 attattttggacaaatttcctcaa 22805
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   catcccaagttcccaaccca 246
             ||||||||||||||||||||
Sbjct: 31976 catcccaagttcccaaccca 31957
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>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ctttattattttggacaaat 23
             ||||||||||||||||||||
Sbjct: 86054 ctttattattttggacaaat 86035
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 227      catcccaagttcccaaccca 246
                ||||||||||||||||||||
Sbjct: 21717293 catcccaagttcccaaccca 21717274
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      tcccaagttcccaacccaag 248
                ||||||||||||||||||||
Sbjct: 34218220 tcccaagttcccaacccaag 34218201
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   tcccaagttcccaacccaag 248
             ||||||||||||||||||||
Sbjct: 91560 tcccaagttcccaacccaag 91541
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>ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal giant larvae homolog
           2 (LOC360661), mRNA
          Length = 8565

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 agctgcctcagcggtcgcat 229
           ||||||||||||||||||||
Sbjct: 773 agctgcctcagcggtcgcat 792
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>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 42     aattttgaaccctacaatatagtt 65
              |||||||||||||||||| |||||
Sbjct: 114656 aattttgaaccctacaatgtagtt 114679
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 227      catcccaagttcccaaccca 246
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Sbjct: 21728956 catcccaagttcccaaccca 21728937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,082,312
Number of Sequences: 3902068
Number of extensions: 2082312
Number of successful extensions: 33585
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 33451
Number of HSP's gapped (non-prelim): 131
length of query: 301
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 279
effective length of database: 17,147,199,772
effective search space: 4784068736388
effective search space used: 4784068736388
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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