ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13m07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NADA_ECOLI (P11458) Quinolinate synthetase A 27 9.5
2NADA_ECOL6 (Q8FJS7) Quinolinate synthetase A 27 9.5
3NADA_ECO57 (Q8X963) Quinolinate synthetase A 27 9.5

>NADA_ECOLI (P11458) Quinolinate synthetase A|
          Length = 347

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 167 IQFVWQTQGVRSTLKNIWQPTAQAECS 247
           ++F+ +T  + S  K I  PT QAECS
Sbjct: 88  VRFMGETAKILSPEKTILMPTLQAECS 114



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>NADA_ECOL6 (Q8FJS7) Quinolinate synthetase A|
          Length = 347

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 167 IQFVWQTQGVRSTLKNIWQPTAQAECS 247
           ++F+ +T  + S  K I  PT QAECS
Sbjct: 88  VRFMGETAKILSPEKTILMPTLQAECS 114



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>NADA_ECO57 (Q8X963) Quinolinate synthetase A|
          Length = 347

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 167 IQFVWQTQGVRSTLKNIWQPTAQAECS 247
           ++F+ +T  + S  K I  PT QAECS
Sbjct: 88  VRFMGETAKILSPEKTILMPTLQAECS 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,929,291
Number of Sequences: 219361
Number of extensions: 727496
Number of successful extensions: 1915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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