ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 327 9e-87
2emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 319 2e-84
3gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 305 3e-80
4emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 295 3e-77
5emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 281 5e-73
6gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 240 2e-60
7dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 113 2e-22
8dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 105 6e-20
9emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr... 94 2e-16
10dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 92 9e-16
11dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c... 90 3e-15
12gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 88 1e-14
13gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp... 86 5e-14
14emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat... 84 2e-13
15gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp... 82 8e-13
16gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca... 82 8e-13
17gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph... 82 8e-13
18gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi... 82 8e-13
19gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi... 82 8e-13
20gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat... 82 8e-13
21gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ... 82 8e-13
22gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos... 82 8e-13
23gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo... 82 8e-13
24gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi... 76 5e-11
25dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp... 76 5e-11
26dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 76 5e-11
27gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi... 74 2e-10
28gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph... 74 2e-10
29gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat... 74 2e-10
30gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate... 74 2e-10
31gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha... 74 2e-10
32dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 74 2e-10
33gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat... 72 8e-10
34dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis... 72 8e-10
35gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate... 70 3e-09
36dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 68 1e-08
37dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 68 1e-08
38dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib... 68 1e-08
39dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 68 1e-08
40dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 68 1e-08
41gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos... 66 5e-08
42gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca... 66 5e-08
43dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 62 8e-07
44dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 62 8e-07
45dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 60 3e-06
46dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r... 60 3e-06
47dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat... 60 3e-06
48dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 60 3e-06
49dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha... 60 3e-06
50dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 60 3e-06
51dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 60 3e-06
52dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 60 3e-06
53dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph... 60 3e-06
54dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat... 60 3e-06
55dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r... 60 3e-06
56dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp... 60 3e-06
57dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 60 3e-06
58dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho... 60 3e-06
59dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 60 3e-06
60dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 60 3e-06
61dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos... 60 3e-06
62dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 60 3e-06
63dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 60 3e-06
64dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 58 1e-05
65dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph... 58 1e-05
66emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ri... 56 5e-05
67dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph... 54 2e-04
68dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate... 54 2e-04
69dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
70dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
71dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
72dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
73dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
74gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 52 8e-04
75emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa... 52 8e-04
76gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisp... 52 8e-04
77dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib... 52 8e-04
78dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos... 52 8e-04
79dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mR... 52 8e-04
80emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphat... 50 0.003
81emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene 50 0.003
82emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate c... 50 0.003
83gb|AY103730.1| Zea mays PCO095823 mRNA sequence 50 0.003
84dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphat... 50 0.003
85gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1... 48 0.012
86dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.012
87dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.012
88dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.012
89emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523... 48 0.012
90dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mR... 48 0.012
91emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisph... 46 0.047
92gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate car... 46 0.047
93gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate car... 46 0.047
94gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate car... 46 0.047
95gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carbo... 46 0.047
96gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate ca... 44 0.18
97gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate ca... 44 0.18
98gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphat... 44 0.18
99gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carb... 44 0.18
100gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxyla... 44 0.18
101gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bis... 42 0.73
102emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch... 42 0.73
103emb|AL161790.23| Human DNA sequence from clone RP11-558L8 on chr... 42 0.73
104emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxy... 42 0.73
105emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small sub... 42 0.73
106emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small sub... 42 0.73
107emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subu... 42 0.73
108emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subu... 42 0.73
109emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subu... 42 0.73
110emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subuni... 42 0.73
111emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch... 40 2.9
112emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom... 40 2.9
113emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ... 40 2.9
114emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 40 2.9
115gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp... 40 2.9
116dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
117dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9 
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  327 bits (165), Expect = 9e-87
 Identities = 211/227 (92%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||
Sbjct: 646 gctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaaata 587

                                                                       
Query: 61  ngaaagataa-tggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatgg 119
            ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 586 agaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatgg 527

                                                                       
Query: 120 cactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagnc 179
           |||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||| |
Sbjct: 526 cactttatatatggcctgtcgtgagtgagctgtttaggccttgccggactcctcgcagcc 467

                                                          
Query: 180 tggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
            || ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 466 cggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgt 420
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>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  319 bits (161), Expect = 2e-84
 Identities = 210/227 (92%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||
Sbjct: 767 gctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaaata 708

                                                                       
Query: 61  ngaaagataa-tggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatgg 119
            ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 707 agaaagataaatggacaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatgg 648

                                                                       
Query: 120 cactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagnc 179
           ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| |
Sbjct: 647 cactttatatgcggcccgtggtgagtgagctgtttatgccttgccggactcctcgcagcc 588

                                                          
Query: 180 tggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
            || ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 587 cggtggcttgaaggcgatgaagctgacgcactgcacctggcgcatgt 541
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  305 bits (154), Expect = 3e-80
 Identities = 203/220 (92%), Gaps = 1/220 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           |||||||||||||||||| || ||||||||||| |||||||| ||| |||||||||||||
Sbjct: 220 gctttctcgagccatgttcgtacatgaacatggacatacacatattcttaggaacaaata 161

                                                                       
Query: 61  ngaaagataa-tggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatgg 119
            ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 160 agaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatgg 101

                                                                       
Query: 120 cactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagnc 179
           |||||||||| |||||  |||| ||||||||||||| ||||||||||||||||||||| |
Sbjct: 100 cactttatatatggcctgtcgtgagtgagctgtttaggccttgccggactcctcgcagcc 41

                                                   
Query: 180 tggnggcttgaaggcgatgaagctgacgcactgnacctga 219
            || ||||||||||||||||||||||||||||| ||||||
Sbjct: 40  cggtggcttgaaggcgatgaagctgacgcactgcacctga 1
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  295 bits (149), Expect = 3e-77
 Identities = 207/227 (91%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           ||||||||||||||||||| | ||||||||||| |||||||| ||| |||||||||| ||
Sbjct: 495 gctttctcgagccatgttgttacatgaacatggacatacacatattcttaggaacaagta 436

                                                                       
Query: 61  ngaaagataa-tggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatgg 119
            |||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 435 agaaagacaaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatgg 376

                                                                       
Query: 120 cactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagnc 179
           ||||||||||||||||| | || ||||||||||||| ||||||||||||||||||||| |
Sbjct: 375 cactttatatgtggcccgtggtgagtgagctgtttaggccttgccggactcctcgcagcc 316

                                                          
Query: 180 tggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
            || ||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 315 cggtggcttgaaggcaatgaagctgacgcactgcacctggcgcatgt 269
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  281 bits (142), Expect = 5e-73
 Identities = 208/228 (91%), Gaps = 3/228 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||
Sbjct: 727 gctttctcgagccatgttggtacatgaacatggacatacacatattcttaggaacaaata 668

                                                                       
Query: 61  ngaaagataa-tggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatgg 119
            ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 667 agaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaaactgcaatgg 608

                                                                       
Query: 120 cactttatatgt-ggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagn 178
           |||||| ||| | ||||  |||| ||||||||||||| ||||||||||||||||||||| 
Sbjct: 607 cacttt-tatataggcctgtcgtgagtgagctgtttaggccttgccggactcctcgcagc 549

                                                           
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           | || |||||| ||||||||||||||||| |||| |||||||||||||
Sbjct: 548 ccggtggcttggaggcgatgaagctgacggactgcacctgacgcatgt 501
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>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  240 bits (121), Expect = 2e-60
 Identities = 206/226 (91%), Gaps = 9/226 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctttctcgagccatgttggtncatgaacatgggcatacacacatttttaggaacaaata 60
           |||||||||||| |||||||| ||||||||||||  |||||||||||| |||||||| ||
Sbjct: 691 gctttctcgagc-atgttggtacatgaacatgggactacacacatttt-aggaacaa-ta 635

                                                                       
Query: 61  ngaaagataatggagaaggaaaacccaangcaatgtcagagttgacaaaactgcaatggc 120
            ||||||||||||||||||||||||  | ||| |||||||||||||||| ||||||||||
Sbjct: 634 agaaagataatggagaaggaaaacc--aagca-tgtcagagttgacaaa-ctgcaatggc 579

                                                                       
Query: 121 actttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcctcgcagnct 180
           |||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||
Sbjct: 578 actt-atatgtg-cccatcgtcagtgagctgtttatgccttgcccgactcctggcagcct 521

                                                         
Query: 181 ggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           || |||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 520 ggtggcttgaaagcgatgaagctgacgcactgcacctgacgcatgt 475
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>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p9-1
          Length = 739

 Score =  113 bits (57), Expect = 2e-22
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||| | || ||||||||||||||||||||||||||||| |||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676

                     
Query: 217 tgacgcatgt 226
           ||||||||||
Sbjct: 675 tgacgcatgt 666
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>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p2-1
          Length = 653

 Score =  105 bits (53), Expect = 6e-20
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||| | || ||||||||||||||||||||||||||||| |||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590

                     
Query: 217 tgacgcatgt 226
           || |||||||
Sbjct: 589 tggcgcatgt 580
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>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
          Length = 845

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 152 tttatgccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcact 211
           |||||||||||||||| |||||||||  ||| ||| ||||||| ||||||||||||||||
Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537

                          
Query: 212 gnacctgacgcatgt 226
           | ||||| |||||||
Sbjct: 536 gcacctggcgcatgt 522
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>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p10-1
          Length = 629

 Score = 91.7 bits (46), Expect = 9e-16
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||  |||| ||| ||||||||||||||||||||||||| |||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566

                  
Query: 217 tgacgca 223
           || ||||
Sbjct: 565 tggcgca 559
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>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ave-A
          Length = 590

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 533
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>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
            gene, exons 1 and 2
          Length = 2205

 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 151  gtttatgccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcac 210
            ||||| ||||||||||||||||||||  | || ||| |||||||||||||||||||||||
Sbjct: 1511 gtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 1452

                         
Query: 211  tgnacctgacgca 223
            || ||||| ||||
Sbjct: 1451 tgcacctggcgca 1439
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>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 586

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 163 ccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgc 222
           ||||| ||||||||| |||| ||||||||||||||||||||||||||||| || ||||| 
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526

               
Query: 223 atgt 226
           ||||
Sbjct: 525 atgt 522
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>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small
           subunit (rbcS gene)
          Length = 518

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||  | || ||| ||||||||||||||||||||||||| |||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455

                  
Query: 217 tgacgca 223
           || ||||
Sbjct: 454 tggcgca 448
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>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 600

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgt 536
to top
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 594

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgt 530
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>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
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>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
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>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
to top
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgt 440
to top
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
to top
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, partial cds
          Length = 504

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 53/58 (91%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
to top
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, complete cds
          Length = 779

 Score = 81.8 bits (41), Expect = 8e-13
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||| ||||||||| |||| ||| ||||||| |||||||||||||| || |||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522

                     
Query: 217 tgacgcatgt 226
           || |||||||
Sbjct: 521 tggcgcatgt 512
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>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 172 tcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           |||||| | || ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgt 440
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>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bro-B
          Length = 784

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgca 730
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>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase Small subunit, complete cds,
           clone:p6-1
          Length = 638

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||  | || ||| |||| |||||||||||||||||||| |||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575

                  
Query: 217 tgacgca 223
           || ||||
Sbjct: 574 tggcgca 568
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>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
           small subunit (rbcS) mRNA, nuclear gene encoding
           chloroplast protein, partial cds
          Length = 504

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| |||||||| |||||||||||||||||||| || ||||| ||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgt 440
to top
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgt 440
to top
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| ||||||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgt 440
to top
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| |||| |||||||| |||||||||||||||||||| || ||||| ||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgt 440
to top
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) mRNA, nuclear gene encoding chloroplast
           protein, partial cds
          Length = 504

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgt 440
to top
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, complete cds,
           clone:p13-1
          Length = 985

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 157 gccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacc 216
           ||||||||||||||||||||  | || ||| ||||||| ||||||||||||||||| |||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922

             
Query: 217 tg 218
           ||
Sbjct: 921 tg 920
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>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
           subunit (rbcS) gene, partial cds
          Length = 593

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 163 ccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactg 212
           ||||| ||||||||| |||| |||||||| ||||||||||||||||||||
Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactg 543
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>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, complete cds,
            clone:6, subclone:16
          Length = 5980

 Score = 71.9 bits (36), Expect = 8e-10
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 151  gtttatgccttgccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcac 210
            ||||| |||||||| |||||||||||  | || ||| |||| ||||||||||||||||||
Sbjct: 1265 gtttaggccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcac 1206

                         
Query: 211  tgnacctgacgca 223
            || ||||| ||||
Sbjct: 1205 tgcacctggcgca 1193



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 189  gaaggcgatgaagctgacgcactgnacctgacgca 223
            ||||| |||||||||||||||||  ||||| ||||
Sbjct: 4288 gaaggtgatgaagctgacgcactacacctggcgca 4254
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>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) gene, partial cds
          Length = 620

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 163 ccggactcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgc 222
           ||||| ||||||||| | || |||||||| |||||||||||||||||||| || ||||| 
Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560

               
Query: 223 atgt 226
           ||||
Sbjct: 559 atgt 556
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>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-B
          Length = 772

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 718
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>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-A
          Length = 605

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-A
          Length = 605

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A2
          Length = 604

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 550
to top
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A1
          Length = 604

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 550
to top
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
           carboxylase small subunit (rbcS) mRNA, nuclear gene
           encoding chloroplast protein, partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgt 440
to top
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
           (rbcS) mRNA, nuclear gene encoding chloroplast protein,
           partial cds
          Length = 504

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgcatgt 226
           ||||||||| | || ||||||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgt 440
to top
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-A
          Length = 611

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 190 aaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||||||||||||||||| ||||||||||
Sbjct: 590 aaggcgatgaagctgacgcactgcacctgacgca 557
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>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe3-A3
          Length = 604

 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           |||| ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 594 ctggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 550
to top
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B2
          Length = 781

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 727
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>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-B
          Length = 787

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 733
to top
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Ura-B
          Length = 787

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 733
to top
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-B
          Length = 781

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 727
to top
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sea-B
          Length = 728

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 674
to top
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-B
          Length = 792

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 738
to top
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-B
          Length = 792

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 738
to top
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-B
          Length = 787

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 733
to top
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Agr-A
          Length = 604

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 550
to top
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Hor-A
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgca 551
to top
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Ara-A
          Length = 604

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 550
to top
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Squ-A
          Length = 607

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| | ||||||||||||||||||||||| ||||| ||||
Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgca 553
to top
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-A
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sha-A
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A3
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A2
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Lon-A1
          Length = 605

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| ||||||||||||||||||||||||| ||||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgca 551
to top
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe1-A1
          Length = 604

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgca 550
to top
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds
          Length = 604

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  |||| ||| ||||||||||||| ||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgca 550
to top
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-B
          Length = 789

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 188 tgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||||||||||||||||||| ||||| ||||
Sbjct: 770 tgaaggcgatgaagctgacgcactgcacctggcgca 735
to top
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Bic-B
          Length = 783

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 188 tgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||||||||||||||||||| ||||| ||||
Sbjct: 769 tgaaggcgatgaagctgacgcactgcacctggcgca 734
to top
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate
           carboxylase small subunit percursor (rbcs gene)
          Length = 686

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 180 tggnggcttgaaggcgatgaagctgacgcactgnacctgacg 221
           ||| |||||| |||||||||||||||||||||| || |||||
Sbjct: 585 tggcggcttgtaggcgatgaagctgacgcactgcacttgacg 544
to top
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           CS-B1
          Length = 787

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 190 aaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||||||||||||||||| ||||| ||||
Sbjct: 766 aaggcgatgaagctgacgcactgcacctggcgca 733
to top
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Sec-A
          Length = 591

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 190 aaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||||||||||||||||| ||||| ||||
Sbjct: 570 aaggcgatgaagctgacgcactgcacctggcgca 537
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 166      gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
                |||||||||||| | || |||||| |||||||||||||||
Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctga 10079822



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 162      gccggactcctcgcagnctggnggcttgaaggcgatgaagct 203
                |||||||||||||||  | || |||||| |||||||||||||
Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276924



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 166      gactcctcgcagnctggnggcttgaaggcgatgaagct 203
                |||||||||||  |||| |||||| |||||||||||||
Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagct 11262261
to top
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full
           insert sequence
          Length = 984

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctga 686
to top
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full
           insert sequence
          Length = 828

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctga 532
to top
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full
           insert sequence
          Length = 2409

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctga 533
to top
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full
           insert sequence
          Length = 830

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctga 535
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 166      gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
                |||||||||||| | || |||||| |||||||||||||||
Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctga 10079707



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 162      gccggactcctcgcagnctggnggcttgaaggcgatgaagct 203
                |||||||||||||||  | || |||||| |||||||||||||
Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276595



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 166      gactcctcgcagnctggnggcttgaaggcgatgaagct 203
                |||||||||||  |||| |||||| |||||||||||||
Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagct 11261932
to top
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145890

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 166   gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
             |||||||||||| | || |||||| |||||||||||||||
Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctga 82799
to top
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate
           carboxylase/oxygenase (rbcS) mRNA, complete cds
          Length = 808

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctga 510
to top
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit, partial cds, clone Dic-B
          Length = 787

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 191 aggcgatgaagctgacgcactgnacctgacgca 223
           |||||||||||||||||||||| ||||| ||||
Sbjct: 765 aggcgatgaagctgacgcactgcacctggcgca 733
to top
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit, partial cds, clone
           Spe2-A
          Length = 604

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 169 tcctcgcagnctggnggcttgaaggcgatgaagctgacgcactgnacctgacgca 223
           ||||||||  | || ||| |||||||| |||||||||||||||| ||||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgca 550
to top
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS1139
          Length = 830

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||||||||
Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctga 530
to top
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase
            small subunit (EC 4.1.1.39)
          Length = 1648

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 184  ggcttgaaggcgatgaagctgacgcactg 212
            |||||| ||||||||||||||||||||||
Sbjct: 1147 ggcttgtaggcgatgaagctgacgcactg 1119
to top
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene
          Length = 1274

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||||||||||
Sbjct: 810 ggcttgtaggcgatgaagctgacgcactg 782
to top
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit
           (RuBPC; EC 4.1.1.39)
          Length = 830

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||||||||||
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactg 534
to top
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence
          Length = 1172

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||||||||||
Sbjct: 682 ggcttgtaggcgatgaagctgacgcactg 654
to top
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small
           subunit, complete cds
          Length = 830

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||||||||||
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactg 534
to top
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit mRNA, complete cds;
           chloroplast
          Length = 860

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagct 203
           |||||||||||  |||| |||||| |||||||||||||
Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagct 529
to top
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full
           insert sequence
          Length = 947

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 162 gccggactcctcgcagnctggnggcttgaaggcgatgaagct 203
           |||||||||||||||  | || |||||| |||||||||||||
Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 546
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>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full
           insert sequence
          Length = 899

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagct 203
           |||||||||||  |||| |||||| |||||||||||||
Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagct 546
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>dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F10, full
           insert sequence
          Length = 418

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagct 203
           |||||||||||  |||| |||||| |||||||||||||
Sbjct: 61  gactcctcgcaacctgggggcttgtaggcgatgaagct 24
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>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127267

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 166    gactcctcgcagnctggnggcttgaaggcgatgaagct 203
              |||||||||||  |||| |||||| |||||||||||||
Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagct 109793



 Score = 48.1 bits (24), Expect = 0.012
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 162   gccggactcctcgcagnctggnggcttgaaggcgatgaagct 203
             |||||||||||||||  | || |||||| |||||||||||||
Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 95130
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>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
           of ribulose-1,5-bisphosphate carboxylase, complete cds,
           clone pOSSS2106
          Length = 895

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagct 203
           |||||||||||  |||| |||||| |||||||||||||
Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagct 544
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>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small
            subunit
          Length = 1601

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 179  ctggnggcttgaaggcgatgaagctgacgcactg 212
            |||| |||||| ||||||||||||||| ||||||
Sbjct: 1297 ctgggggcttgtaggcgatgaagctgatgcactg 1264
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>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
           rbcS3 mRNA, complete cds
          Length = 772

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactg 212
           |||| |||||| ||||||||||||||| ||||||
Sbjct: 563 ctgggggcttgtaggcgatgaagctgatgcactg 530
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>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
           rbcS2 mRNA, complete cds
          Length = 830

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactg 212
           |||| |||||| ||||||||||||||| ||||||
Sbjct: 563 ctgggggcttgtaggcgatgaagctgatgcactg 530
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>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
           rbcS1 mRNA, complete cds
          Length = 750

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactg 212
           |||| |||||| ||||||||||||||| ||||||
Sbjct: 563 ctgggggcttgtaggcgatgaagctgatgcactg 530
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>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 765

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 179 ctggnggcttgaaggcgatgaagctgacgcactg 212
           |||| |||||| ||||||||||||||| ||||||
Sbjct: 560 ctgggggcttgtaggcgatgaagctgatgcactg 527
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>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 835

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           |||||||||||| | || |||||| |||||||||| ||||
Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactga 521
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>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 854

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 166 gactcctcgcagnctggnggcttgaaggcgatgaagctga 205
           ||||| |||||| | || |||||| |||||||||||||||
Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctga 558
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>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase
            small subunit precursor (rbcS) gene, nuclear gene
            encoding chloroplast protein, complete cds
          Length = 1069

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 180  tggnggcttgaaggcgatgaagctgacgcactg 212
            ||| |||||| ||||||||||||||| ||||||
Sbjct: 1059 tgggggcttgtaggcgatgaagctgatgcactg 1027
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>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit
            precursor (rbcS) gene, nuclear gene encoding chloroplast
            protein, complete cds
          Length = 1089

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 180  tggnggcttgaaggcgatgaagctgacgcactg 212
            ||| |||||| ||||||||||||||| ||||||
Sbjct: 1079 tgggggcttgtaggcgatgaagctgatgcactg 1047
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>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4)
            gene, complete cds
          Length = 2185

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 180  tggnggcttgaaggcgatgaagctgacgcactg 212
            ||| |||||| ||||||||||||||| ||||||
Sbjct: 1730 tgggggcttgtaggcgatgaagctgatgcactg 1698
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>gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit (rbcS) mRNA, partial
           cds; nuclear gene for chloroplast product
          Length = 345

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 46  ggcttgtaggcgatgaagctgatgcactg 18
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>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 169841

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 28    acatgggcatacacacatttttagg 52
             ||||||||||||| |||||||||||
Sbjct: 10408 acatgggcatacatacatttttagg 10432
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>emb|AL161790.23| Human DNA sequence from clone RP11-558L8 on chromosome 9 Contains part of
              the gene for a novel protein (KIAA1608), complete sequence
          Length = 120896

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     aaagataatggagaaggaaaa 83
              |||||||||||||||||||||
Sbjct: 106774 aaagataatggagaaggaaaa 106754
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>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit
           (cDNA clone pLg ssu1)
          Length = 776

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 530 ggcttgtaggcgatgaagctgatgcactg 502
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>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 791

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 609 ggcttgtaggcgatgaagctgatgcactg 581
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>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 791

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 607 ggcttgtaggcgatgaagctgatgcactg 579
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>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 936

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 585 ggcttgtaggcgatgaagctgatgcactg 557
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>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 800

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 628 ggcttgtaggcgatgaagctgatgcactg 600
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>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 858

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 604 ggcttgtaggcgatgaagctgatgcactg 576
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>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose
           bisphosphate carboxylase (EC 4.1.1.39)
          Length = 764

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 184 ggcttgaaggcgatgaagctgacgcactg 212
           |||||| ||||||||||||||| ||||||
Sbjct: 515 ggcttgtaggcgatgaagctgatgcactg 487
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>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete
              sequence
          Length = 175757

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    aaaactgcaatggcacttta 126
              ||||||||||||||||||||
Sbjct: 166594 aaaactgcaatggcacttta 166575
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>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of
             the DAB1 gene for disabled homolog 1 (Drosophila),
             complete sequence
          Length = 134011

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    cagagttgacaaaactgcaatggc 120
             |||||||||||||||| |||||||
Sbjct: 88758 cagagttgacaaaactacaatggc 88735
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>emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 on chromosome 10 Contains the
              ZNF37B pseudogene for zinc finger protein 37b (KOX 21), a
              eukaryotic translation initiation factor 3 subunit 6
              interacting protein (EIF3S6IP) pseudogene, the 3' end of
              the ZNF11B gene for zinc finger protein 11b (KOX 2), a
              novel gene (FLJ23327) and two CpG Islands, complete
              sequence
          Length = 146328

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     gcaatgtcagagttgacaaa 109
              ||||||||||||||||||||
Sbjct: 137860 gcaatgtcagagttgacaaa 137841
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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tgggcatacacacattttta 50
             ||||||||||||||||||||
Sbjct: 27477 tgggcatacacacattttta 27496
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>gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    acatgggcatacacacatttttag 51
             ||||||||||||||||| ||||||
Sbjct: 61720 acatgggcatacacacaattttag 61697
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 29       catgggcatacacacatttttagg 52
                |||||||||| |||||||||||||
Sbjct: 28187903 catgggcatagacacatttttagg 28187926
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     catgggcatacacacatttttagg 52
              |||||||||| |||||||||||||
Sbjct: 177550 catgggcatagacacatttttagg 177573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,777,166
Number of Sequences: 3902068
Number of extensions: 1777166
Number of successful extensions: 111947
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111741
Number of HSP's gapped (non-prelim): 196
length of query: 226
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 204
effective length of database: 17,147,199,772
effective search space: 3498028753488
effective search space used: 3498028753488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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