ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190891.1| Oryza sativa (japonica cultivar-group), predic... 84 7e-13
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
3dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
4emb|AJ222782.1|HVJ222782 Hordeum vulgare mRNA for subtilisin-lik... 68 4e-08
5ref|NM_190890.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
6gb|AF200467.1|AF200467 Oryza sativa subtilase mRNA, complete cds 56 2e-04
7ref|NM_190888.1| Oryza sativa (japonica cultivar-group), predic... 52 0.003
8dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
9dbj|AK063520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.003
10ref|XM_625044.1| PREDICTED: Apis mellifera similar to GA16887-PA... 46 0.16
11gb|DQ386647.1| Astatotilapia burtoni clone BAC 20D21 platelet-de... 42 2.4
12gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosom... 42 2.4
13gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's ... 42 2.4
14dbj|AB236041.1| Cardiandra moellendorffii var. moellendorffii ch... 42 2.4
15gb|AC158805.4| Mus musculus 10 BAC RP24-222M1 (Roswell Park Canc... 42 2.4
16ref|NM_105292.2| Arabidopsis thaliana peptidase/ subtilase AT1G6... 40 9.6
17gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 40 9.6
18gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 9.6
19emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in ... 40 9.6
20emb|BX511231.4| Zebrafish DNA sequence from clone DKEY-31B10 in ... 40 9.6
21gb|AC066691.3|AC066691 Arabidopsis thaliana chromosome 1 BAC T6J... 40 9.6
22gb|BT005956.1| Arabidopsis thaliana At1g66210 gene, complete cds 40 9.6
23gb|AC016543.6|AC016543 Homo sapiens chromosome 14q24.3 clone RP1... 40 9.6
24dbj|AK118565.1| Arabidopsis thaliana At1g66210 mRNA for unknown ... 40 9.6
25gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01,... 40 9.6 
>ref|NM_190891.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2409

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 168/210 (80%)
 Strand = Plus / Minus

                                                                        
Query: 446  gtgcacccaaagaatttgttgtactcacggggatcaatgtcgtagacaaggccgggatcg 505
            ||||| ||||||||||||||||| || |  |||||||||||||| |  ||||| ||||| 
Sbjct: 2036 gtgcatccaaagaatttgttgtaatcgcttggatcaatgtcgtaaatcaggccaggatca 1977

                                                                        
Query: 506  gccgcgcctccggggttgatgttgccgccaccatagtcgaacgggtcggcggtcttccga 565
            || || |     ||||||||||  ||||| |||||||| || ||||| ||  ||||||||
Sbjct: 1976 gctgctctgttagggttgatgtgcccgcctccatagtcaaatgggtcagcaatcttccga 1917

                                                                        
Query: 566  ctcagcccttccgccagtatcggcatgccacgctcgtccgttatatgggctgtggtgatg 625
              || |||||| |||||||| |||||||||||||| || |||| |   ||||||||||  
Sbjct: 1916 ggcaacccttcggccagtatgggcatgccacgctcatcagttacagatgctgtggtgact 1857

                                          
Query: 626  atggctgattttatcgcggcaggagaccag 655
            |||||||||||||  || ||||| ||||||
Sbjct: 1856 atggctgattttagtgcagcaggtgaccag 1827



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 122  ctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtccccttgcagc 181
            ||||||||||| ||  | ||| ||||||||| ||| ||||| ||||||||||| ||||||
Sbjct: 2354 ctcactgtcttctggccgttgtgccaagtaaggctcccaaacgtgtagtccccctgcagc 2295

                                                        
Query: 182  ttccacattggtgacaacttcaccttaaatgtatgaactttgtt 225
            ||||| |  ||||| | ||| ||||  || ||||||||||||||
Sbjct: 2294 ttccatagaggtgaaagctttacctggaacgtatgaactttgtt 2251
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                            
Query: 446      gtgcacccaaagaatttgttgtactcacggggatcaatgtcgtagacaaggccgggatcg 505
                ||||| ||||||||||||||||| || |  |||||||||||||| |  ||||| ||||| 
Sbjct: 33672602 gtgcatccaaagaatttgttgtaatcgcttggatcaatgtcgtaaatcaggccaggatca 33672543

                                                                            
Query: 506      gccgcgcctccggggttgatgttgccgccaccatagtcgaacgggtcggcggtcttccga 565
                || || |     ||||||||||  ||||| |||||||| || ||||| ||  ||||||||
Sbjct: 33672542 gctgctctgttagggttgatgtgcccgcctccatagtcaaatgggtcagcaatcttccga 33672483

                                                   
Query: 566      ctcagcccttccgccagtatcggcatgccacgctc 600
                  || |||||| |||||||| ||||||||||||||
Sbjct: 33672482 ggcaacccttcggccagtatgggcatgccacgctc 33672448



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                            
Query: 122      ctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtccccttgcagc 181
                ||||||||||| ||  | ||| ||||||||| ||| ||||| ||||||||||| ||||||
Sbjct: 33672920 ctcactgtcttctggccgttgtgccaagtaaggctcccaaacgtgtagtccccctgcagc 33672861

                                                            
Query: 182      ttccacattggtgacaacttcaccttaaatgtatgaactttgtt 225
                ||||| |  ||||| | ||| ||||  || ||||||||||||||
Sbjct: 33672860 ttccatagaggtgaaagctttacctggaacgtatgaactttgtt 33672817



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 116      ggaatcctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtcccct 175
                ||||| ||||||| |||||  || ||| ||||||||| ||||||||| || |||||||||
Sbjct: 33665462 ggaattctcactgacttgttgtcattgtgccaagtaaggctgccaaatgtatagtcccct 33665403

                    
Query: 176      tgca 179
                ||||
Sbjct: 33665402 tgca 33665399



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                            
Query: 144      gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
                ||||||||| ||||||||| || |||||||||||||  ||||| |  ||||| ||  | |
Sbjct: 33656193 gccaagtaaggctgccaaatgtatagtccccttgcaatttccatagaggtgaaaaactaa 33656134

                                      
Query: 204      ccttaaatgtatgaactttgtt 225
                |||| || ||||||||||||||
Sbjct: 33656133 ccttgaaggtatgaactttgtt 33656112



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 441      tgatggtgcacccaaagaatttgttgta 468
                ||||||||||| ||||||| ||||||||
Sbjct: 33665143 tgatggtgcacgcaaagaacttgttgta 33665116
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>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0699H05
          Length = 144850

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 125/155 (80%)
 Strand = Plus / Minus

                                                                         
Query: 446   gtgcacccaaagaatttgttgtactcacggggatcaatgtcgtagacaaggccgggatcg 505
             ||||| ||||||||||||||||| || |  |||||||||||||| |  ||||| ||||| 
Sbjct: 25672 gtgcatccaaagaatttgttgtaatcgcttggatcaatgtcgtaaatcaggccaggatca 25613

                                                                         
Query: 506   gccgcgcctccggggttgatgttgccgccaccatagtcgaacgggtcggcggtcttccga 565
             || || |     ||||||||||  ||||| |||||||| || ||||| ||  ||||||||
Sbjct: 25612 gctgctctgttagggttgatgtgcccgcctccatagtcaaatgggtcagcaatcttccga 25553

                                                
Query: 566   ctcagcccttccgccagtatcggcatgccacgctc 600
               || |||||| |||||||| ||||||||||||||
Sbjct: 25552 ggcaacccttcggccagtatgggcatgccacgctc 25518



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                         
Query: 122   ctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtccccttgcagc 181
             ||||||||||| ||  | ||| ||||||||| ||| ||||| ||||||||||| ||||||
Sbjct: 25990 ctcactgtcttctggccgttgtgccaagtaaggctcccaaacgtgtagtccccctgcagc 25931

                                                         
Query: 182   ttccacattggtgacaacttcaccttaaatgtatgaactttgtt 225
             ||||| |  ||||| | ||| ||||  || ||||||||||||||
Sbjct: 25930 ttccatagaggtgaaagctttacctggaacgtatgaactttgtt 25887



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 116   ggaatcctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtcccct 175
             ||||| ||||||| |||||  || ||| ||||||||| ||||||||| || |||||||||
Sbjct: 18532 ggaattctcactgacttgttgtcattgtgccaagtaaggctgccaaatgtatagtcccct 18473

                 
Query: 176   tgca 179
             ||||
Sbjct: 18472 tgca 18469



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 144  gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
            ||||||||| ||||||||| || |||||||||||||  ||||| |  ||||| ||  | |
Sbjct: 9263 gccaagtaaggctgccaaatgtatagtccccttgcaatttccatagaggtgaaaaactaa 9204

                                  
Query: 204  ccttaaatgtatgaactttgtt 225
            |||| || ||||||||||||||
Sbjct: 9203 ccttgaaggtatgaactttgtt 9182



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 441   tgatggtgcacccaaagaatttgttgta 468
             ||||||||||| ||||||| ||||||||
Sbjct: 18213 tgatggtgcacgcaaagaacttgttgta 18186
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>emb|AJ222782.1|HVJ222782 Hordeum vulgare mRNA for subtilisin-like protease, clone RG114
          Length = 320

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                       
Query: 144 gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
           ||||||||| ||| ||||| ||||||||||| |||| ||||||||| || |||| |||||
Sbjct: 287 gccaagtaaggctaccaaatgtgtagtccccatgcaacttccacataggggacagcttca 228

                                 
Query: 204 ccttaaatgtatgaactttgtt 225
           ||| | | || |||||||||||
Sbjct: 227 cctgatacgtctgaactttgtt 206
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>ref|NM_190890.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2043

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 116  ggaatcctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtcccct 175
            ||||| ||||||| |||||  || ||| ||||||||| ||||||||| || |||||||||
Sbjct: 1994 ggaattctcactgacttgttgtcattgtgccaagtaaggctgccaaatgtatagtcccct 1935

                
Query: 176  tgca 179
            ||||
Sbjct: 1934 tgca 1931



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 441  tgatggtgcacccaaagaatttgttgta 468
            ||||||||||| ||||||| ||||||||
Sbjct: 1675 tgatggtgcacgcaaagaacttgttgta 1648
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>gb|AF200467.1|AF200467 Oryza sativa subtilase mRNA, complete cds
          Length = 2545

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                        
Query: 116  ggaatcctcactgtcttgtgctccttgcgccaagtaatgctgccaaaggtgtagtcccct 175
            ||||| ||||||| |||||  || ||| ||||||||| ||||||||| || |||||||||
Sbjct: 2166 ggaattctcactgacttgttgtcattgtgccaagtaaggctgccaaatgtatagtcccct 2107

                
Query: 176  tgca 179
            ||||
Sbjct: 2106 tgca 2103



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 441  tgatggtgcacccaaagaatttgttgta 468
            ||||||||||| ||||||| ||||||||
Sbjct: 1847 tgatggtgcacgcaaagaacttgttgta 1820
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>ref|NM_190888.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2214

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 144  gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
            ||||||||| ||||||||| || |||||||||||||  ||||| |  ||||| ||  | |
Sbjct: 2137 gccaagtaaggctgccaaatgtatagtccccttgcaatttccatagaggtgaaaaactaa 2078

                                  
Query: 204  ccttaaatgtatgaactttgtt 225
            |||| || ||||||||||||||
Sbjct: 2077 ccttgaaggtatgaactttgtt 2056
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>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C02
          Length = 80086

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                         
Query: 144   gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
             ||||||||| ||||||||| || |||||||||||||  ||||| |  ||||| ||  | |
Sbjct: 71065 gccaagtaaggctgccaaatgtatagtccccttgcaatttccatagaggtgaaaaactaa 71006

                                   
Query: 204   ccttaaatgtatgaactttgtt 225
             |||| || ||||||||||||||
Sbjct: 71005 ccttgaaggtatgaactttgtt 70984



 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 441   tgatggtgcacccaaagaatttgttgta 468
             ||||||||||| ||||||| ||||||||
Sbjct: 80015 tgatggtgcacgcaaagaacttgttgta 79988
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>dbj|AK063520.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H07, full
            insert sequence
          Length = 2462

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 144  gccaagtaatgctgccaaaggtgtagtccccttgcagcttccacattggtgacaacttca 203
            ||||||||| ||||||||| || |||||||||||||  ||||| |  ||||| ||  | |
Sbjct: 2152 gccaagtaaggctgccaaatgtatagtccccttgcaatttccatagaggtgaaaaactaa 2093

                                  
Query: 204  ccttaaatgtatgaactttgtt 225
            |||| || ||||||||||||||
Sbjct: 2092 ccttgaaggtatgaactttgtt 2071
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>ref|XM_625044.1| PREDICTED: Apis mellifera similar to GA16887-PA (LOC552668), mRNA
          Length = 1371

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 290 tgtgcatgatacacagaatcaac 312
           |||||||||||||||||||||||
Sbjct: 223 tgtgcatgatacacagaatcaac 201
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>gb|DQ386647.1| Astatotilapia burtoni clone BAC 20D21 platelet-derived growth factor
             receptor beta b (pdgfrbb) and colony-stimulating factor 1
             receptor b (csf1rb) genes, complete cds
          Length = 144596

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 293   gcatgatacacagaatcaacc 313
             |||||||||||||||||||||
Sbjct: 38040 gcatgatacacagaatcaacc 38060
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>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete
             sequence
          Length = 212994

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 323   tttgtcactgtcctccacagt 343
             |||||||||||||||||||||
Sbjct: 14368 tttgtcactgtcctccacagt 14388
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>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227298

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 643    ggcaggagaccagtgtgggtg 663
              |||||||||||||||||||||
Sbjct: 202155 ggcaggagaccagtgtgggtg 202175
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>dbj|AB236041.1| Cardiandra moellendorffii var. moellendorffii chloroplast DNA,
           trnS-trnG intergenic spacer, partial sequence, country:
           China
          Length = 713

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   aagtggtatatatntatataataa 24
           ||||||||||||| ||||||||||
Sbjct: 127 aagtggtatatatctatataataa 104
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>gb|AC158805.4| Mus musculus 10 BAC RP24-222M1 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 131325

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 323    tttgtcactgtcctccacagt 343
              |||||||||||||||||||||
Sbjct: 103944 tttgtcactgtcctccacagt 103964
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>ref|NM_105292.2| Arabidopsis thaliana peptidase/ subtilase AT1G66210 mRNA, complete
            cds
          Length = 2519

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 529  gccgccaccatagtcgaacgggtcggcg 556
            |||||| |||||||| ||||||||||||
Sbjct: 1933 gccgcctccatagtcaaacgggtcggcg 1906
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
              sequence
          Length = 252420

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 10     atatntatataataagagcacaatttc 36
              |||| |||||||||||| |||||||||
Sbjct: 207044 atatttatataataagaacacaatttc 207070
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 621    tgatgatggctgattttatc 640
              ||||||||||||||||||||
Sbjct: 728535 tgatgatggctgattttatc 728554
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>emb|BX649311.10| Zebrafish DNA sequence from clone DKEY-63I8 in linkage group 2,
             complete sequence
          Length = 228024

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 7     tatatatntatataataagagca 29
             ||||||| |||||||||||||||
Sbjct: 21563 tatatatatatataataagagca 21541
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>emb|BX511231.4| Zebrafish DNA sequence from clone DKEY-31B10 in linkage group 2,
             complete sequence
          Length = 93016

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 7     tatatatntatataataagagca 29
             ||||||| |||||||||||||||
Sbjct: 43477 tatatatatatataataagagca 43455
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>gb|AC066691.3|AC066691 Arabidopsis thaliana chromosome 1 BAC T6J19 genomic sequence,
            complete sequence
          Length = 43666

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 529  gccgccaccatagtcgaacgggtcggcg 556
            |||||| |||||||| ||||||||||||
Sbjct: 6528 gccgcctccatagtcaaacgggtcggcg 6555
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>gb|BT005956.1| Arabidopsis thaliana At1g66210 gene, complete cds
          Length = 2280

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 529  gccgccaccatagtcgaacgggtcggcg 556
            |||||| |||||||| ||||||||||||
Sbjct: 1800 gccgcctccatagtcaaacgggtcggcg 1773
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>gb|AC016543.6|AC016543 Homo sapiens chromosome 14q24.3 clone RP11-516J2 containing hERRB2 gene,
              partial cds, complete sequence
          Length = 196784

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 644    gcaggagaccagtgtgggtg 663
              ||||||||||||||||||||
Sbjct: 122866 gcaggagaccagtgtgggtg 122885
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>dbj|AK118565.1| Arabidopsis thaliana At1g66210 mRNA for unknown protein, complete
            cds, clone: RAFL19-79-M19
          Length = 2518

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 529  gccgccaccatagtcgaacgggtcggcg 556
            |||||| |||||||| ||||||||||||
Sbjct: 1933 gccgcctccatagtcaaacgggtcggcg 1906
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>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence
          Length = 53923

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 623   atgatggctgattttatcgcggcaggagaccagtgtgggtgttgagccttgagtag 678
             ||||| || |||||||  ||||||||||||||||  |||||| |||  ||||||||
Sbjct: 24297 atgatagcggattttaaagcggcaggagaccagtcagggtgtagagatttgagtag 24352


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,669,969
Number of Sequences: 3902068
Number of extensions: 4669969
Number of successful extensions: 79276
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79164
Number of HSP's gapped (non-prelim): 107
length of query: 702
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 679
effective length of database: 17,143,297,704
effective search space: 11640299141016
effective search space used: 11640299141016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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