ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13l16 |
|---|---|
| Clone Library Name | barley_pub |
>ARSA_METJA (Q58542) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 349 Score = 80.5 bits (197), Expect = 5e-15 Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 1/131 (0%) Frame = -3 Query: 617 QEVQQQDAANKLEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESV 438 +++ +LE+++ER+V+ R + D E T F +V IP M+I ES R +LQK + Sbjct: 207 EDIDYDKMLEELEKMKERIVRARNILSDPERTAFRLVVIPEEMSILESERAMKALQKYGI 266 Query: 437 PVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDPELMGLNIM-QAPLVDMEIRGV 261 P+ +IVNQ++ P C FC +R+ Q + L+MIK E G ++ PL+ E +G+ Sbjct: 267 PIDAVIVNQLI-PEDVQCDFCRARRELQLKRLEMIK---EKFGDKVIAYVPLLRTEAKGI 322 Query: 260 PALKFLGDIVW 228 LK + I++ Sbjct: 323 ETLKQIAKILY 333
>ARSA_METTH (O27555) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 324 Score = 78.6 bits (192), Expect = 2e-14 Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Frame = -3 Query: 695 DASIGKILKLRXXXXXXXXXXXSVF---GQEVQQQDAANKLEQLRERMVKVRELFRDTES 525 D+ +GK++K+R ++ G E ++ A +E ++++ RE+ D E Sbjct: 163 DSWVGKMIKIRRQIGSMAKAFKNILPFMGDEEEEDRALQDMEATKKQINAAREVMSDPER 222 Query: 524 TEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRA 345 T F +V IP M+I ES R +L+K S+ +IVNQVL P SDC+FC +RK Q Sbjct: 223 TSFKMVVIPEEMSIYESERAMKALEKYSIHADGVIVNQVL-PEESDCEFCNARRKLQQER 281 Query: 344 LDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFLGDIVWK*P 219 L I+ + + + PL+ E +G+ L+ + + ++ P Sbjct: 282 LKQIRE--KFSDKVVAEVPLLKKEAKGIETLEKIAEQLYGEP 321
>ARSA1_MOUSE (O54984) Arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) Length = 348 Score = 63.9 bits (154), Expect = 5e-10 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 2/149 (1%) Frame = -3 Query: 704 TSXDASIGKILKLRXXXXXXXXXXXSVFGQ-EVQQQDAANKLEQLRERMVKVRELFRDTE 528 T + +G++++++ ++ G ++ A+KLE+ + V E F+D E Sbjct: 181 TIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPE 240 Query: 527 STEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQ-VLPPSSSDCKFCAIKRKDQT 351 T FI V I +++ E+ RL L K + +IVNQ V P CK C + K Q Sbjct: 241 QTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQA 300 Query: 350 RALDMIKSDPELMGLNIMQAPLVDMEIRG 264 + LD ++ E +I++ PL+ E+RG Sbjct: 301 KYLDQMEDLYE--DFHIVKLPLLPHEVRG 327
>ARSA1_HUMAN (O43681) Arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) Length = 348 Score = 63.9 bits (154), Expect = 5e-10 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 2/149 (1%) Frame = -3 Query: 704 TSXDASIGKILKLRXXXXXXXXXXXSVFGQ-EVQQQDAANKLEQLRERMVKVRELFRDTE 528 T + +G++++++ ++ G ++ A+KLE+ + V E F+D E Sbjct: 181 TIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPE 240 Query: 527 STEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQ-VLPPSSSDCKFCAIKRKDQT 351 T FI V I +++ E+ RL L K + +IVNQ V P CK C + K Q Sbjct: 241 QTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQA 300 Query: 350 RALDMIKSDPELMGLNIMQAPLVDMEIRG 264 + LD ++ E +I++ PL+ E+RG Sbjct: 301 KYLDQMEDLYE--DFHIVKLPLLPHEVRG 327
>ARSA_CAEEL (P30632) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 342 Score = 57.8 bits (138), Expect = 3e-08 Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%) Frame = -3 Query: 680 KILKLRXXXXXXXXXXXSVFGQEV-QQQDAANKLEQLRERMVKVRELFRDTESTEFIIVT 504 KIL L+ +FG + K+ E + K+ F+D T F+ V Sbjct: 181 KILSLQGMFGPMMNQFGGMFGMGGGSMNEMIEKMTTTLESVKKMNAQFKDPNCTTFVCVC 240 Query: 503 IPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSS-----DCKFCAIKRKDQTRALD 339 I +++ E+ RL L K+ + +IVNQ+L P + C+ CA ++ Q++ L Sbjct: 241 IAEFLSLYETERLIQELSKQGIDTHNIIVNQLLFPDTDANGTVSCRKCASRQAIQSKYLT 300 Query: 338 MIKSDPELMGLNIMQAPLVDMEIRGVPAL 252 I D ++++ PL++ E+RG PA+ Sbjct: 301 DI--DELYEDFHVVKLPLLEAEVRGGPAI 327
>ARSA_SYNY3 (Q55794) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 396 Score = 47.0 bits (110), Expect = 6e-05 Identities = 33/134 (24%), Positives = 62/134 (46%) Frame = -3 Query: 626 VFGQEVQQQDAANKLEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQK 447 + G + ++ + + E++ + ++ D T +VT P M + ES R H+ L Sbjct: 177 IAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVTNPEKMVLKESLRAHAYLSL 236 Query: 446 ESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIR 267 +V +I N++LP + D F K Q ++ + L + +APL E+ Sbjct: 237 YNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDN---FHPLPVKEAPLFSEEMC 293 Query: 266 GVPALKFLGDIVWK 225 G+ AL+ L D ++K Sbjct: 294 GLAALERLKDTLYK 307
>ARSA2_AQUAE (O66674) Putative arsenical pump-driving ATPase 2 (EC 3.6.3.16)| (Arsenite-translocating ATPase 2) (Arsenical resistance ATPase 2) (Arsenite-transporting ATPase 2) Length = 299 Score = 43.9 bits (102), Expect = 5e-04 Identities = 32/118 (27%), Positives = 59/118 (50%) Frame = -3 Query: 602 QDAANKLEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRL 423 ++A L++ +ER K E+ D + F V P + E+ RL +SL+ + V+ L Sbjct: 178 EEALEYLKERKERFKKFSEIIYD--KSYFFAVLTPEKLPFEETKRLVNSLKHYGIRVKAL 235 Query: 422 IVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALK 249 I+N+VLP + D +F +++ + + L I++ M + + P E+ G LK Sbjct: 236 IINKVLPENPQD-EFLKARKEVEKKFLKEIEN--YFMDIEKISIPYQKEEVVGYEKLK 290
>ARSA2_ECOLI (P52145) Arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 583 Score = 40.4 bits (93), Expect = 0.005 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 2/116 (1%) Frame = -3 Query: 584 LEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVL 405 LE+ RE+ E D E T ++V + E AR H L + + L++N VL Sbjct: 179 LEKQREQYAHAVEALSDPERTRLVLVARLQKSTLQEVARTHDELSAIGLKNQYLVINGVL 238 Query: 404 PPSSS--DCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 P S D AI +++Q ++ +L N+ PL + GV ALK L Sbjct: 239 PASEEKRDALAAAIWQREQEALANLPAGLSDLPTDNLYLQPL---NMVGVSALKGL 291 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/99 (21%), Positives = 45/99 (45%) Frame = -3 Query: 539 RDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRK 360 +D E T+ ++VT+P + E+A L S L++ + I+N L + + + Sbjct: 486 QDQERTKVLLVTLPETTPVLEAANLQSDLERAGIHPWGWIINNSLWIAQTQSPLLCQRAL 545 Query: 359 DQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 + ++++K+ I P++ E G+ L+ L Sbjct: 546 QERPQIEVVKNQ---HASRIALVPVMAAEPTGIEKLREL 581
>ARSA1_AQUAE (O66908) Putative arsenical pump-driving ATPase 1 (EC 3.6.3.16)| (Arsenite-translocating ATPase 1) (Arsenical resistance ATPase 1) (Arsenite-transporting ATPase 1) Length = 396 Score = 39.3 bits (90), Expect = 0.012 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%) Frame = -3 Query: 584 LEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVL 405 LE ER+ V E+ + + T IV+ P M + ES R V V +IVN+V+ Sbjct: 193 LETFYERLKGVDEILINPDITSIRIVSNPEKMVLKESQRAFLYFLLFGVNVDAVIVNKVI 252 Query: 404 PPSSSDCKFCAIKRKDQTRALDMIKS-DPELMGLNIMQAPLVDMEIRGVPALKFLGDIVW 228 P + C+ K +K + + + + PL++ E+ G+ L+ L +++ Sbjct: 253 PEEVIQQENCSFLEKWLNIQKKYVKEIESYFSPVPVFKVPLLEEEVVGLERLEKLAQLIY 312
>ARSA_ACIMU (O50593) Arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 583 Score = 38.5 bits (88), Expect = 0.020 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Frame = -3 Query: 584 LEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVL 405 LE+ RE+ E D E T ++V + E AR H L + + + L++N VL Sbjct: 179 LEKQREQYAHAVEALSDPERTRLVLVARLQNSTLQEVARTHEELAEIGLKNQYLVINGVL 238 Query: 404 PPSSS--DCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 P + + D AI +++Q ++ EL ++ P + + GV ALK L Sbjct: 239 PEAEAEHDALAAAIWQREQEALANLPAGLSELPTDTLLLQP---VNMVGVSALKGL 291 Score = 29.6 bits (65), Expect = 9.5 Identities = 19/99 (19%), Positives = 45/99 (45%) Frame = -3 Query: 539 RDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRK 360 +D + T+ ++VT+P + E+A L + L++ + I+N L + + + + Sbjct: 486 QDPDRTKVLLVTLPETTPVLEAANLQADLERAGIHPWGWIINNSLSIADTRSPLLCQRAQ 545 Query: 359 DQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 + ++ +K+ I P++ E G+ L+ L Sbjct: 546 QELPQIEAVKNQ---HADRIALVPVLASEPAGIEKLREL 581
>ARSA1_ECOLI (P08690) Arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 583 Score = 35.8 bits (81), Expect = 0.13 Identities = 26/101 (25%), Positives = 49/101 (48%) Frame = -3 Query: 545 LFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIK 366 L +D E T+ ++VT+P + E+A L + L++ + I+N L S +D + ++ Sbjct: 484 LLQDPERTKVLLVTLPETTPVLEAANLQADLERAGIHPWGWIINNSL--SIADTRSPLLR 541 Query: 365 RKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 + Q + L I+S + P++ E G+ LK L Sbjct: 542 MRAQ-QELPQIESVKRQHASRVALVPVLASEPTGIDKLKQL 581 Score = 34.7 bits (78), Expect = 0.30 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 2/116 (1%) Frame = -3 Query: 584 LEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVL 405 LE+ RE+ E D + T ++V + E AR H L + + L++N VL Sbjct: 179 LEKQREQYAYAVEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQYLVINGVL 238 Query: 404 P--PSSSDCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPALKFL 243 P +++D AI ++Q AL + +D L GL L + + GV AL L Sbjct: 239 PKTEAANDTLAAAIWEREQ-EALANLPAD--LAGLPTDTLFLQPVNMVGVSALSRL 291
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 34.7 bits (78), Expect = 0.30 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = +1 Query: 538 RKSSRTLTILSLSCSNLFAASCC*TSCPNTDLIADVAEAILLLSFKIFPMDAS 696 R S RT+T+L C F S C C N ++D++E + L K+ ++A+ Sbjct: 104 RVSYRTVTVLEWRCCPGFTGSNCDEECMNCTRLSDMSERLTTLEAKVLLLEAA 156
>MIND_CHLVU (P56346) Putative septum site-determining protein minD| Length = 282 Score = 30.4 bits (67), Expect = 5.6 Identities = 16/68 (23%), Positives = 34/68 (50%) Frame = -3 Query: 521 EFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRAL 342 E +IVT P + AI ++ R+ L+ + +L+VN+V P +++ + + Sbjct: 152 EAVIVTTPEITAIRDADRVAGLLEANGIYNVKLLVNRVRPDMIQKNDMMSVRDVQEMLGI 211 Query: 341 DMIKSDPE 318 ++ + PE Sbjct: 212 PLLGAIPE 219
>ARSA_CHLTE (Q46366) Putative arsenical pump-driving ATPase (EC 3.6.3.16)| (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) Length = 405 Score = 30.4 bits (67), Expect = 5.6 Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%) Frame = -3 Query: 611 VQQQDAANKLEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSSLQKESVPV 432 + +DA ++Q+ + + +RE+ D + +V M+I E+ R + L V Sbjct: 181 IPPEDAIESVDQVFDELEDIREILTDNVKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV 240 Query: 431 RRLIVNQVLPPSSSDCKFCAIKRKDQTRALDMIKSDPELMGLNIMQAPLVDMEIRGVPAL 252 ++VN++L + + + + Q + L I+ L + + + D EI GV +L Sbjct: 241 DMVLVNKLL-DAQENSGYLEKWKGIQQKYLGEIEEG--FSPLPVKKLKMYDQEIVGVKSL 297 Query: 251 K-FLGDI 234 + F DI Sbjct: 298 EVFAHDI 304
>MIND_SYNY3 (Q55900) Septum site-determining protein minD (Cell division| inhibitor minD) Length = 266 Score = 30.0 bits (66), Expect = 7.3 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%) Frame = -3 Query: 521 EFIIVTIPTVMAISESARLHSSLQKESVPVRRLIVNQVLPPSSSDCKFCAIKRKDQTRAL 342 E IIVT P + A+ ++ R+ L+ E + LIVN++ P + +++ A+ Sbjct: 137 EAIIVTTPEMSAVRDADRVIGLLEAEDIGKISLIVNRLRPEMVQLNQMISVEDILDLLAV 196 Query: 341 DMI---KSDPELMGLNIMQAPLVDMEIRGVPALKF 246 +I D +++ PLV E VP L F Sbjct: 197 PLIGILPDDQKIIISTNKGEPLVMEEKLSVPGLAF 231
>GR22E_DROME (P58953) Putative gustatory receptor 22e| Length = 389 Score = 30.0 bits (66), Expect = 7.3 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +1 Query: 457 EECNLADSLIAMTVGIVTIINSVDSVSRKSSRTLTILSLSCSN 585 E C LA+ T I+ + N ++++ K R++T +L CS+ Sbjct: 307 EICELAERTGRQTSTILKLFNDIENIDEKLERSITDFALFCSH 349
>CP4F4_RAT (P51869) Cytochrome P450 4F4 (EC 1.14.14.1) (CYPIVF4)| Length = 522 Score = 30.0 bits (66), Expect = 7.3 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = -3 Query: 557 KVRELFRDTESTEF---IIVTIP-TVMAISESARLHSSLQKESVPVRRLIVNQVLP 402 +VREL RD ESTE + +P M I ES RLH + +V RR + VLP Sbjct: 357 EVRELLRDRESTEIEWDDLAQLPFLTMCIKESLRLHPPV---TVISRRCTQDIVLP 409
>Y095_TREPA (O83133) Hypothetical protein TP0095| Length = 648 Score = 30.0 bits (66), Expect = 7.3 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +3 Query: 159 INSCIDQVVP-LKLSHFFRKLRSLPHYITQKLQSRNSSNFHVHERCLHYVQPHQL 320 IN +D V P L L+H FR L+ P +T Q R +S F H+ L + + L Sbjct: 212 INQDVDGVAPRLYLAHAFRSLKHFPEALT---QYRAASAFAPHDPALKWYEAAML 263
>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking| family 7) Length = 5327 Score = 29.6 bits (65), Expect = 9.5 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +2 Query: 74 WFYVLFTHVRNGHLLSWILPSSSKELGLDKQLYRSSSSTEVITFFPQT 217 W +L+ H+R H L++ SSS EL ++KQ ++ + P+T Sbjct: 1692 WVGLLWGHLRESHRLAFQEWSSSLELAMEKQTLAATDGHVDVNQVPET 1739
>H31_STYLE (P81195) Histone H3-1 (Fragment)| Length = 114 Score = 29.6 bits (65), Expect = 9.5 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Frame = -3 Query: 614 EVQQQDAANKLEQLRERMVKVRELFRDTESTEFIIVTIPTVMAISESARLHSS---LQKE 444 +V Q K + R V +RE+ + +STE +I +P + E A+ + S Q + Sbjct: 21 QVAQSGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQEYKSDLRFQSQ 80 Query: 443 SVPVRRLIVNQVLPPSSSDCKFCAIKRKDQT 351 +V + + D CAI K T Sbjct: 81 AVLALQEAAEAYMVGLFEDTNLCAIHAKRVT 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,495,924 Number of Sequences: 219361 Number of extensions: 1847661 Number of successful extensions: 4650 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4499 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4648 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7196276819 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
