ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13l16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467761.1| Oryza sativa (japonica cultivar-group), mRNA 563 e-157
2dbj|AK099676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 563 e-157
3gb|AY110869.1| Zea mays CL9361_1 mRNA sequence 210 5e-51
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
5dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
6dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic D... 170 4e-39
7ref|NM_111870.2| Arabidopsis thaliana ATP binding AT3G10350 mRNA... 62 3e-06
8gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 58 4e-05
9gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete se... 54 6e-04
10gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete seq... 54 6e-04
11ref|XM_461819.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.5
12emb|AJ810120.1| Staphylococcus aureus DNA, type IIE Staphylococc... 42 2.5
13emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 42 2.5
14emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chro... 42 2.5
15gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complet... 42 2.5
16gb|AC016650.6| Homo sapiens chromosome 5 clone RPCI-1_167J12, co... 42 2.5
17gb|AC182113.1| Pan troglodytes BAC clone CH251-533C21 from chrom... 42 2.5
18dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
19dbj|AB063173.1| Staphylococcus aureus DNA, type-IV staphylococca... 42 2.5
20ref|NM_119181.2| Arabidopsis thaliana ATP binding AT4G30350 mRNA... 40 9.7
21gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
22gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, com... 40 9.7
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.7
24gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, com... 40 9.7
25emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, ... 40 9.7
26gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Can... 40 9.7
27gb|AC103753.2| Homo sapiens chromosome 15, clone RP11-460N1, com... 40 9.7
28gb|AC107486.4| Homo sapiens BAC clone RP11-814I21 from 4, comple... 40 9.7
29gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Can... 40 9.7
30gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Canc... 40 9.7
31gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.7
32gb|AC008711.8| Homo sapiens chromosome 5 clone CTB-7G24, complet... 40 9.7
33gb|AC016355.8| Homo sapiens chromosome 15, clone RP11-502I4, com... 40 9.7
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
36gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complet... 40 9.7
37gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, comple... 40 9.7
38gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complet... 40 9.7
39gb|AY108990.1| Zea mays PCO064985 mRNA sequence 40 9.7
40gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23 40 9.7
41emb|AL954846.32| Zebrafish DNA sequence from clone CH211-279C3 i... 40 9.7
42dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.7
43gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 9.7
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
45gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, compl... 40 9.7 
>ref|XM_467761.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score =  563 bits (284), Expect = e-157
 Identities = 425/472 (90%)
 Strand = Plus / Minus

                                                                        
Query: 224  acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
            ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 1219 acttccatactatatcgcccaaaaacttcagagcaggaacgcctcttatttccatgtcga 1160

                                                                        
Query: 284  cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
            | ||||||||||| |||| ||||| |||||| | |||||||||| || ||||||||||||
Sbjct: 1159 caagaggtgcttggattaagttcagccccattagctctggatcattccttatcatatcca 1100

                                                                        
Query: 344  aagcacgtgtttgatcctttctttttatagcacaaaatttacagtctgatgatgaaggtg 403
            |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1099 aagcacgtgtttgatcctttctttttatagcacagaatttacagtctgatgacgaaggtg 1040

                                                                        
Query: 404  gtagaacttggttaacaataagtctccttacaggaacactttccttttgcaaggaagaat 463
            |||||| |||||||||||| |||||| | || ||||||||||| |||   | ||||||||
Sbjct: 1039 gtagaatttggttaacaatgagtctcttaacgggaacactttcatttcttagggaagaat 980

                                                                        
Query: 464  gcaatctcgctgattcactgattgccatgaccgttggaatcgtcacaataataaattcag 523
            | | ||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||
Sbjct: 979  gtagtcttgctgattcacttattgccatcactgttggaatagtcacaattataaattcag 920

                                                                        
Query: 524  tcgattctgtatcacggaaaagctctcgcaccttgaccatcctttctctgagttgctcca 583
            | |||||||| ||||| ||||| |||||||| | ||||||||||||||| || |||||||
Sbjct: 919  ttgattctgtgtcacgaaaaagttctcgcacttggaccatcctttctctcagctgctcca 860

                                                                        
Query: 584  atttgtttgctgcatcctgctgttgaacttcttgtccaaatactgacttaatagcagatg 643
            |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 859  atttgtttgctgcatcctgctgttgaacttcttgtccaaaaactgatttaatagctgatg 800

                                                                
Query: 644  ttgctgaagcaatcttgctcctaagcttcaagatcttcccaatggatgcatc 695
            |||| ||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 799  ttgcagaagcgatcttgctcctaagcttcaagatcttcccaatagatgcatc 748
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>dbj|AK099676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070D05, full
           insert sequence
          Length = 1220

 Score =  563 bits (284), Expect = e-157
 Identities = 425/472 (90%)
 Strand = Plus / Minus

                                                                       
Query: 224 acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
           ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 794 acttccatactatatcgcccaaaaacttcagagcaggaacgcctcttatttccatgtcga 735

                                                                       
Query: 284 cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
           | ||||||||||| |||| ||||| |||||| | |||||||||| || ||||||||||||
Sbjct: 734 caagaggtgcttggattaagttcagccccattagctctggatcattccttatcatatcca 675

                                                                       
Query: 344 aagcacgtgtttgatcctttctttttatagcacaaaatttacagtctgatgatgaaggtg 403
           |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 674 aagcacgtgtttgatcctttctttttatagcacagaatttacagtctgatgacgaaggtg 615

                                                                       
Query: 404 gtagaacttggttaacaataagtctccttacaggaacactttccttttgcaaggaagaat 463
           |||||| |||||||||||| |||||| | || ||||||||||| |||   | ||||||||
Sbjct: 614 gtagaatttggttaacaatgagtctcttaacgggaacactttcatttcttagggaagaat 555

                                                                       
Query: 464 gcaatctcgctgattcactgattgccatgaccgttggaatcgtcacaataataaattcag 523
           | | ||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||
Sbjct: 554 gtagtcttgctgattcacttattgccatcactgttggaatagtcacaattataaattcag 495

                                                                       
Query: 524 tcgattctgtatcacggaaaagctctcgcaccttgaccatcctttctctgagttgctcca 583
           | |||||||| ||||| ||||| |||||||| | ||||||||||||||| || |||||||
Sbjct: 494 ttgattctgtgtcacgaaaaagttctcgcacttggaccatcctttctctcagctgctcca 435

                                                                       
Query: 584 atttgtttgctgcatcctgctgttgaacttcttgtccaaatactgacttaatagcagatg 643
           |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 434 atttgtttgctgcatcctgctgttgaacttcttgtccaaaaactgatttaatagctgatg 375

                                                               
Query: 644 ttgctgaagcaatcttgctcctaagcttcaagatcttcccaatggatgcatc 695
           |||| ||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 374 ttgcagaagcgatcttgctcctaagcttcaagatcttcccaatagatgcatc 323
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>gb|AY110869.1| Zea mays CL9361_1 mRNA sequence
          Length = 1154

 Score =  210 bits (106), Expect = 5e-51
 Identities = 206/243 (84%)
 Strand = Plus / Plus

                                                                       
Query: 224 acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
           ||||||||| ||||||||||      || ||||| ||||| |||||||| ||||||||||
Sbjct: 488 acttccacagtatatcacccnnnnnnttgagagccggaacacctctaatctccatgtcca 547

                                                                       
Query: 284 cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
           | ||||||||||| || |||||||| ||  | |||||||| ||| ||  |||||||||||
Sbjct: 548 caagaggtgcttggataatgttcaaaccttttaactctgggtcagtccgtatcatatcca 607

                                                                       
Query: 344 aagcacgtgtttgatcctttctttttatagcacaaaatttacagtctgatgatgaaggtg 403
           | ||||| |||||||||||||     |||| ||| ||||||||||| |||| ||||||||
Sbjct: 608 atgcacgcgtttgatcctttcnnnnnatagaacagaatttacagtccgatgttgaaggtg 667

                                                                       
Query: 404 gtagaacttggttaacaataagtctccttacaggaacactttccttttgcaaggaagaat 463
           | ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 668 gcagaacttggttcacaatgagtctccttacaggaacactttccttttgcaacgaagaat 727

              
Query: 464 gca 466
           |||
Sbjct: 728 gca 730



 Score =  196 bits (99), Expect = 7e-47
 Identities = 168/191 (87%)
 Strand = Plus / Plus

                                                                       
Query: 505 gtcacaataataaattcagtcgattctgtatcacggaaaagctctcgcaccttgaccatc 564
           ||||| || ||||| || || ||||| || || |||||||||||||  || |||||||||
Sbjct: 769 gtcacgattataaactctgttgattccgtgtcgcggaaaagctctcttactttgaccatc 828

                                                                       
Query: 565 ctttctctgagttgctccaatttgtttgctgcatcctgctgttgaacttcttgtccaaat 624
           ||||||||||||||||| |||||||| |||||||||| |||||| || ||||||||||||
Sbjct: 829 ctttctctgagttgctctaatttgttcgctgcatcctcctgttggacctcttgtccaaat 888

                                                                       
Query: 625 actgacttaatagcagatgttgctgaagcaatcttgctcctaagcttcaagatcttccca 684
           ||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 889 actgatttaatagctgatgttgcagaagcaatcttactcctcagcttcaagattttccca 948

                      
Query: 685 atggatgcatc 695
           ||||| |||||
Sbjct: 949 atggacgcatc 959
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  170 bits (86), Expect = 4e-39
 Identities = 125/138 (90%)
 Strand = Plus / Plus

                                                                            
Query: 224      acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
                ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 31271568 acttccatactatatcgcccaaaaacttcagagcaggaacgcctcttatttccatgtcga 31271627

                                                                            
Query: 284      cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
                | ||||||||||| |||| ||||| |||||| | |||||||||| || ||||||||||||
Sbjct: 31271628 caagaggtgcttggattaagttcagccccattagctctggatcattccttatcatatcca 31271687

                                  
Query: 344      aagcacgtgtttgatcct 361
                ||||||||||||||||||
Sbjct: 31271688 aagcacgtgtttgatcct 31271705



 Score =  137 bits (69), Expect = 6e-29
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 359      cctttctttttatagcacaaaatttacagtctgatgatgaaggtggtagaacttggttaa 418
                ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 31271798 cctttctttttatagcacagaatttacagtctgatgacgaaggtggtagaatttggttaa 31271857

                                                                            
Query: 419      caataagtctccttacaggaacactttccttttgcaaggaagaatgcaatctcgctgatt 478
                |||| |||||| | || ||||||||||| |||   | ||||||||| | ||| |||||||
Sbjct: 31271858 caatgagtctcttaacgggaacactttcatttcttagggaagaatgtagtcttgctgatt 31271917

                             
Query: 479      cactgattgccat 491
                |||| ||||||||
Sbjct: 31271918 cacttattgccat 31271930



 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                            
Query: 593      ctgcatcctgctgttgaacttcttgtccaaatactgacttaatagcagatgttgctgaag 652
                ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 31272209 ctgcatcctgctgttgaacttcttgtccaaaaactgatttaatagctgatgttgcagaag 31272268

                                  
Query: 653      caatcttgctcctaagct 670
                | ||||||||||||||||
Sbjct: 31272269 cgatcttgctcctaagct 31272286



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                            
Query: 496      gttggaatcgtcacaataataaattcagtcgattctgtatcacggaaaagctctcgcacc 555
                |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 31272027 gttggaatagtcacaattataaattcagttgattctgtgtcacgaaaaagttctcgcact 31272086

                                                      
Query: 556      ttgaccatcctttctctgagttgctccaatttgtttgc 593
                | ||||||||||||||| || |||||||||||||||||
Sbjct: 31272087 tggaccatcctttctctcagctgctccaatttgtttgc 31272124



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 669      cttcaagatcttcccaatggatgcatc 695
                |||||||||||||||||| ||||||||
Sbjct: 31273003 cttcaagatcttcccaatagatgcatc 31273029



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 585      tttgtttgctgcatcctgctg 605
                |||||||||||||||||||||
Sbjct: 16267761 tttgtttgctgcatcctgctg 16267741
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>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1734_E02
          Length = 168566

 Score =  170 bits (86), Expect = 4e-39
 Identities = 125/138 (90%)
 Strand = Plus / Plus

                                                                          
Query: 224    acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
              ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 151411 acttccatactatatcgcccaaaaacttcagagcaggaacgcctcttatttccatgtcga 151470

                                                                          
Query: 284    cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
              | ||||||||||| |||| ||||| |||||| | |||||||||| || ||||||||||||
Sbjct: 151471 caagaggtgcttggattaagttcagccccattagctctggatcattccttatcatatcca 151530

                                
Query: 344    aagcacgtgtttgatcct 361
              ||||||||||||||||||
Sbjct: 151531 aagcacgtgtttgatcct 151548



 Score =  137 bits (69), Expect = 6e-29
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                          
Query: 359    cctttctttttatagcacaaaatttacagtctgatgatgaaggtggtagaacttggttaa 418
              ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 151641 cctttctttttatagcacagaatttacagtctgatgacgaaggtggtagaatttggttaa 151700

                                                                          
Query: 419    caataagtctccttacaggaacactttccttttgcaaggaagaatgcaatctcgctgatt 478
              |||| |||||| | || ||||||||||| |||   | ||||||||| | ||| |||||||
Sbjct: 151701 caatgagtctcttaacgggaacactttcatttcttagggaagaatgtagtcttgctgatt 151760

                           
Query: 479    cactgattgccat 491
              |||| ||||||||
Sbjct: 151761 cacttattgccat 151773



 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                          
Query: 593    ctgcatcctgctgttgaacttcttgtccaaatactgacttaatagcagatgttgctgaag 652
              ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 152052 ctgcatcctgctgttgaacttcttgtccaaaaactgatttaatagctgatgttgcagaag 152111

                                
Query: 653    caatcttgctcctaagct 670
              | ||||||||||||||||
Sbjct: 152112 cgatcttgctcctaagct 152129



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                          
Query: 496    gttggaatcgtcacaataataaattcagtcgattctgtatcacggaaaagctctcgcacc 555
              |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 151870 gttggaatagtcacaattataaattcagttgattctgtgtcacgaaaaagttctcgcact 151929

                                                    
Query: 556    ttgaccatcctttctctgagttgctccaatttgtttgc 593
              | ||||||||||||||| || |||||||||||||||||
Sbjct: 151930 tggaccatcctttctctcagctgctccaatttgtttgc 151967



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 669    cttcaagatcttcccaatggatgcatc 695
              |||||||||||||||||| ||||||||
Sbjct: 152846 cttcaagatcttcccaatagatgcatc 152872
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>dbj|AP004114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1118_G04
          Length = 134464

 Score =  170 bits (86), Expect = 4e-39
 Identities = 125/138 (90%)
 Strand = Plus / Plus

                                                                         
Query: 224   acttccacactatatcacccaaaaacttcagagcaggaactcctctaatttccatgtcca 283
             ||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 41436 acttccatactatatcgcccaaaaacttcagagcaggaacgcctcttatttccatgtcga 41495

                                                                         
Query: 284   cgagaggtgcttgcattatgttcaaccccatcaactctggatcactctttatcatatcca 343
             | ||||||||||| |||| ||||| |||||| | |||||||||| || ||||||||||||
Sbjct: 41496 caagaggtgcttggattaagttcagccccattagctctggatcattccttatcatatcca 41555

                               
Query: 344   aagcacgtgtttgatcct 361
             ||||||||||||||||||
Sbjct: 41556 aagcacgtgtttgatcct 41573



 Score =  137 bits (69), Expect = 6e-29
 Identities = 117/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 359   cctttctttttatagcacaaaatttacagtctgatgatgaaggtggtagaacttggttaa 418
             ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 41666 cctttctttttatagcacagaatttacagtctgatgacgaaggtggtagaatttggttaa 41725

                                                                         
Query: 419   caataagtctccttacaggaacactttccttttgcaaggaagaatgcaatctcgctgatt 478
             |||| |||||| | || ||||||||||| |||   | ||||||||| | ||| |||||||
Sbjct: 41726 caatgagtctcttaacgggaacactttcatttcttagggaagaatgtagtcttgctgatt 41785

                          
Query: 479   cactgattgccat 491
             |||| ||||||||
Sbjct: 41786 cacttattgccat 41798



 Score =  115 bits (58), Expect = 2e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                         
Query: 593   ctgcatcctgctgttgaacttcttgtccaaatactgacttaatagcagatgttgctgaag 652
             ||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||
Sbjct: 42077 ctgcatcctgctgttgaacttcttgtccaaaaactgatttaatagctgatgttgcagaag 42136

                               
Query: 653   caatcttgctcctaagct 670
             | ||||||||||||||||
Sbjct: 42137 cgatcttgctcctaagct 42154



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                         
Query: 496   gttggaatcgtcacaataataaattcagtcgattctgtatcacggaaaagctctcgcacc 555
             |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||||| 
Sbjct: 41895 gttggaatagtcacaattataaattcagttgattctgtgtcacgaaaaagttctcgcact 41954

                                                   
Query: 556   ttgaccatcctttctctgagttgctccaatttgtttgc 593
             | ||||||||||||||| || |||||||||||||||||
Sbjct: 41955 tggaccatcctttctctcagctgctccaatttgtttgc 41992



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 669   cttcaagatcttcccaatggatgcatc 695
             |||||||||||||||||| ||||||||
Sbjct: 42871 cttcaagatcttcccaatagatgcatc 42897
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>ref|NM_111870.2| Arabidopsis thaliana ATP binding AT3G10350 mRNA, complete cds
          Length = 1923

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                        
Query: 487  gccatgaccgttggaatcgtcacaataataaattcagtcgattctgtatcacggaaaagc 546
            ||||| |||||||| || || ||||| |  ||||| || || ||||| ||||||||||||
Sbjct: 1042 gccattaccgttgggatagtgacaatgacgaattctgttgactctgtgtcacggaaaagc 983

                                                       
Query: 547  tctcgcaccttgaccatcctttctctgagttgctccaatttgt 589
            || || || || |||||||||||||| ||||  ||||||||||
Sbjct: 982  tcgcgaactttaaccatcctttctcttagtttttccaatttgt 940



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 664 ctaagcttcaagatcttcccaatggatgcatc 695
           |||||||||||||| || ||||||||||||||
Sbjct: 865 ctaagcttcaagattttaccaatggatgcatc 834
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>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
             complete sequence
          Length = 87937

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 529   tctgtatcacggaaaagctctcgcaccttgaccatcctttctctgagttgctccaatttg 588
             ||||| |||||||||||||| || || || |||||||||||||| ||||  |||||||||
Sbjct: 20685 tctgtgtcacggaaaagctcgcgaactttaaccatcctttctcttagtttttccaatttg 20744

              
Query: 589   t 589
             |
Sbjct: 20745 t 20745
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>gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete sequence
          Length = 138948

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 319   tctggatcactctttatcatatccaaagcacgtgtttgatcct 361
             |||||||||||||  |||||||| | |||||||||||||||||
Sbjct: 68381 tctggatcactctgaatcatatcaagagcacgtgtttgatcct 68339



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                         
Query: 359   cctttctttttatagcacaaaatttacagtctgatgatgaaggtggtagaacttggttaa 418
             |||||||||| || |||||||| || || || ||||  || ||||| |||| ||| || |
Sbjct: 68172 cctttcttttcattgcacaaaacttgcaatcagatgcagatggtggaagaagttgattga 68113

                                         
Query: 419   caataagtctccttacaggaacactttc 446
             |||| |||||| | ||||||||||||||
Sbjct: 68112 caatgagtctcttcacaggaacactttc 68085



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                         
Query: 508   acaataataaattcagtcgattctgtatcacggaaaagctctcgcaccttgaccatcctt 567
             ||||||| |||||| ||||| || || ||||| |||||||| ||||| || | |||||| 
Sbjct: 67703 acaataacaaattctgtcgaatcagtgtcacgaaaaagctcgcgcacttttatcatcctc 67644

                                   
Query: 568   tctctgagttgctccaatttgt 589
             || || || | |||||||||||
Sbjct: 67643 tccctaagcttctccaatttgt 67622
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>gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete sequence
          Length = 138950

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 319   tctggatcactctttatcatatccaaagcacgtgtttgatcct 361
             |||||||||||||  |||||||| | |||||||||||||||||
Sbjct: 70568 tctggatcactctgaatcatatcaagagcacgtgtttgatcct 70610



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                         
Query: 359   cctttctttttatagcacaaaatttacagtctgatgatgaaggtggtagaacttggttaa 418
             |||||||||| || |||||||| || || || ||||  || ||||| |||| ||| || |
Sbjct: 70777 cctttcttttcattgcacaaaacttgcaatcagatgcagatggtggaagaagttgattga 70836

                                         
Query: 419   caataagtctccttacaggaacactttc 446
             |||| |||||| | ||||||||||||||
Sbjct: 70837 caatgagtctcttcacaggaacactttc 70864



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                         
Query: 508   acaataataaattcagtcgattctgtatcacggaaaagctctcgcaccttgaccatcctt 567
             ||||||| |||||| ||||| || || ||||| |||||||| ||||| || | |||||| 
Sbjct: 71246 acaataacaaattctgtcgaatcagtgtcacgaaaaagctcgcgcacttttatcatcctc 71305

                                   
Query: 568   tctctgagttgctccaatttgt 589
             || || || | |||||||||||
Sbjct: 71306 tccctaagcttctccaatttgt 71327
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>ref|XM_461819.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G06919g)
            partial mRNA
          Length = 3207

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 142  taaagaacttggattggataa 162
            |||||||||||||||||||||
Sbjct: 2766 taaagaacttggattggataa 2786
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>emb|AJ810120.1| Staphylococcus aureus DNA, type IIE Staphylococcal Cassette
            Chromosome mec (SCCmec), strain AR13.1/3330.2
          Length = 27029

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 382  ttacagtctgatgatgaaggt 402
            |||||||||||||||||||||
Sbjct: 3914 ttacagtctgatgatgaaggt 3934
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    taaagaacttggattggataa 162
              |||||||||||||||||||||
Sbjct: 547657 taaagaacttggattggataa 547637
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>emb|AL662790.21| Mouse DNA sequence from clone RP23-53E2 on chromosome 11 Contains the
             5' end of a novel pseudogene (similar to hypothetical
             protein TR:Q8C517), 3 novel pseudogenes (similar to
             hypothetical protein TR:Q8C517) and the 5' end of the
             Col1a1 gene for pro-collagen type I alpha 1, complete
             sequence
          Length = 133405

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   tacagtctgatgatgaaggtg 403
             |||||||||||||||||||||
Sbjct: 62868 tacagtctgatgatgaaggtg 62888
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>gb|AC096763.2| Homo sapiens BAC clone RP11-625A6 from 4, complete sequence
          Length = 168710

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 377   aaaatttacagtctgatgatg 397
             |||||||||||||||||||||
Sbjct: 18221 aaaatttacagtctgatgatg 18201
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>gb|AC016650.6| Homo sapiens chromosome 5 clone RPCI-1_167J12, complete sequence
          Length = 184886

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 651    agcaatcttgctcctaagctt 671
              |||||||||||||||||||||
Sbjct: 156320 agcaatcttgctcctaagctt 156300
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>gb|AC182113.1| Pan troglodytes BAC clone CH251-533C21 from chromosome unknown, complete
              sequence
          Length = 221601

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 651    agcaatcttgctcctaagctt 671
              |||||||||||||||||||||
Sbjct: 208543 agcaatcttgctcctaagctt 208523
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>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487H05
          Length = 176057

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 585    tttgtttgctgcatcctgctg 605
              |||||||||||||||||||||
Sbjct: 102248 tttgtttgctgcatcctgctg 102228
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>dbj|AB063173.1| Staphylococcus aureus DNA, type-IV staphylococcal cassette chromosome
            mec, strain:JCSC1978(8/6-3P)
          Length = 21777

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 382  ttacagtctgatgatgaaggt 402
            |||||||||||||||||||||
Sbjct: 4215 ttacagtctgatgatgaaggt 4235
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>ref|NM_119181.2| Arabidopsis thaliana ATP binding AT4G30350 mRNA, complete cds
          Length = 3236

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 gtgtttgatcctttcttttt 369
           ||||||||||||||||||||
Sbjct: 99  gtgtttgatcctttcttttt 118
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>gb|AC120534.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0084A20,
              complete sequence
          Length = 139391

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 602    gctgttgaacttcttgtcca 621
              ||||||||||||||||||||
Sbjct: 109182 gctgttgaacttcttgtcca 109201
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>gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, complete sequence
          Length = 157775

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    aactctggatcactctttat 335
              ||||||||||||||||||||
Sbjct: 107786 aactctggatcactctttat 107805
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     agtctgatgatgaaggtggt 405
               ||||||||||||||||||||
Sbjct: 5741641 agtctgatgatgaaggtggt 5741622
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>gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, complete sequence
          Length = 159705

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   aactctggatcactctttat 335
             ||||||||||||||||||||
Sbjct: 44495 aactctggatcactctttat 44476
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>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72
          Length = 198924

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    gtgtttgatcctttcttttt 369
              ||||||||||||||||||||
Sbjct: 187489 gtgtttgatcctttcttttt 187508
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>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165378

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ttgatcctttctttttatag 373
              ||||||||||||||||||||
Sbjct: 134156 ttgatcctttctttttatag 134175
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>gb|AC103753.2| Homo sapiens chromosome 15, clone RP11-460N1, complete sequence
          Length = 179822

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   caaccccatcaactctggat 325
             ||||||||||||||||||||
Sbjct: 32077 caaccccatcaactctggat 32096
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>gb|AC107486.4| Homo sapiens BAC clone RP11-814I21 from 4, complete sequence
          Length = 59463

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tttctttttatagcacaaaa 380
             ||||||||||||||||||||
Sbjct: 19461 tttctttttatagcacaaaa 19442
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>gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159621

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 563    tcctttctctgagttgctcc 582
              ||||||||||||||||||||
Sbjct: 120679 tcctttctctgagttgctcc 120660
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>gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115927

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 540   gaaaagctctcgcaccttga 559
             ||||||||||||||||||||
Sbjct: 39211 gaaaagctctcgcaccttga 39230
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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   agtctgatgatgaaggtggt 405
             ||||||||||||||||||||
Sbjct: 89530 agtctgatgatgaaggtggt 89549
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>gb|AC008711.8| Homo sapiens chromosome 5 clone CTB-7G24, complete sequence
          Length = 101036

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   tgtttgatcctttcttttta 370
             ||||||||||||||||||||
Sbjct: 25580 tgtttgatcctttcttttta 25599
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>gb|AC016355.8| Homo sapiens chromosome 15, clone RP11-502I4, complete sequence
          Length = 186428

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   caaccccatcaactctggat 325
             ||||||||||||||||||||
Sbjct: 32798 caaccccatcaactctggat 32779
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 602     gctgttgaacttcttgtcca 621
               ||||||||||||||||||||
Sbjct: 2968369 gctgttgaacttcttgtcca 2968388
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 386     agtctgatgatgaaggtggt 405
               ||||||||||||||||||||
Sbjct: 5740854 agtctgatgatgaaggtggt 5740835
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>gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complete sequence
          Length = 152996

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   ctgagttgctccaatttgtt 590
             ||||||||||||||||||||
Sbjct: 26678 ctgagttgctccaatttgtt 26697
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>gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, complete sequence
          Length = 151336

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 668    gcttcaagatcttcccaatg 687
              ||||||||||||||||||||
Sbjct: 111859 gcttcaagatcttcccaatg 111878
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>gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complete sequence
          Length = 183783

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   gatcctttctttttatagca 375
             ||||||||||||||||||||
Sbjct: 61061 gatcctttctttttatagca 61080
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>gb|AY108990.1| Zea mays PCO064985 mRNA sequence
          Length = 1517

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 583  aatttgtttgctgcatcctg 602
            ||||||||||||||||||||
Sbjct: 1264 aatttgtttgctgcatcctg 1283
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>gb|AF160182.1|F17I23 Arabidopsis thaliana BAC F17I23
          Length = 134784

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    gtgtttgatcctttcttttt 369
              ||||||||||||||||||||
Sbjct: 107752 gtgtttgatcctttcttttt 107733
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>emb|AL954846.32| Zebrafish DNA sequence from clone CH211-279C3 in linkage group 7,
              complete sequence
          Length = 167377

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     aaaccctctggttttatgtg 85
              ||||||||||||||||||||
Sbjct: 150876 aaaccctctggttttatgtg 150895
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>dbj|AP004243.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-312N17, complete
             sequences
          Length = 167368

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 638   cagatgttgctgaagcaatc 657
             ||||||||||||||||||||
Sbjct: 37031 cagatgttgctgaagcaatc 37012
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    actcctctaatttccatgtc 281
              ||||||||||||||||||||
Sbjct: 919649 actcctctaatttccatgtc 919630
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 602     gctgttgaacttcttgtcca 621
               ||||||||||||||||||||
Sbjct: 2977400 gctgttgaacttcttgtcca 2977419
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>gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, complete sequence
          Length = 250160

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aactctggatcactctttat 335
             ||||||||||||||||||||
Sbjct: 33360 aactctggatcactctttat 33379


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,712,522
Number of Sequences: 3902068
Number of extensions: 6712522
Number of successful extensions: 164063
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163703
Number of HSP's gapped (non-prelim): 359
length of query: 712
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 689
effective length of database: 17,143,297,704
effective search space: 11811732118056
effective search space used: 11811732118056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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