ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC... 839 0.0
2emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(E... 811 0.0
3emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-gluc... 795 0.0
4emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS 400 e-108
5emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA,... 385 e-104
6emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase 137 3e-29
7gb|AY109289.1| Zea mays PCO135820 mRNA sequence 133 5e-28
8gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-gluc... 117 3e-23
9gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1... 113 5e-22
10gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
11emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase 113 5e-22
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
13gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, comple... 113 5e-22
14dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
15dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
16ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predic... 109 8e-21
17ref|NM_189726.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
19dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
20dbj|AK063126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
21gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minici... 46 0.094
22gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 44 0.37
23gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome ... 42 1.5
24gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 42 1.5
25gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
26gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosom... 42 1.5
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, comple... 42 1.5
29gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like re... 42 1.5
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
31emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 42 1.5
32gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome... 40 5.8
33gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, comp... 40 5.8
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
35emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in... 40 5.8
36gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, comple... 40 5.8
37emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chro... 40 5.8
38emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7... 40 5.8
39emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 5.8
40emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chrom... 40 5.8
41emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b... 40 5.8
42gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 40 5.8
43gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, compl... 40 5.8
44dbj|AB035418.1| Bombyx mori mRNA for serine protease zymogen (pr... 40 5.8
45gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 5.8
46gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 5.8
47gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Can... 40 5.8
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
50gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, c... 40 5.8
51gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 5.8
52ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal ... 40 5.8
53gb|AY061936.1| Bombyx mori prophenoloxidase activating factor 3 ... 40 5.8
54emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in... 40 5.8
55emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in... 40 5.8
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
57gb|DQ157441.1| Bombyx mori pro-BAEEase mRNA, complete cds 40 5.8 
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
          Length = 6260

 Score =  839 bits (423), Expect = 0.0
 Identities = 430/431 (99%), Gaps = 1/431 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaat 59
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5834 ttcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaat 5775

                                                                        
Query: 60   tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5774 tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 5715

                                                                        
Query: 120  atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5714 atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 5655

                                                                        
Query: 180  tggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggt 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5654 tggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggt 5595

                                                                        
Query: 240  cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5594 cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 5535

                                                                        
Query: 300  tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5534 tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 5475

                                                                        
Query: 360  tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5474 tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 5415

                       
Query: 420  ctccacgccgt 430
            |||||||||||
Sbjct: 5414 ctccacgccgt 5404
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>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
          Length = 4643

 Score =  811 bits (409), Expect = 0.0
 Identities = 427/431 (99%), Gaps = 4/431 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaat 59
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4424 ttcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaat 4365

                                                                        
Query: 60   tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4364 tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 4305

                                                                        
Query: 120  atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4304 atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 4245

                                                                        
Query: 180  tggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggt 239
            ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||
Sbjct: 4244 tggtacactagtatagcaagccactact---cgcgtacgcatctgagctgcctcagcggt 4188

                                                                        
Query: 240  cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4187 cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 4128

                                                                        
Query: 300  tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4127 tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 4068

                                                                        
Query: 360  tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4067 tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 4008

                       
Query: 420  ctccacgccgt 430
            |||||||||||
Sbjct: 4007 ctccacgccgt 3997
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>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
          Length = 4849

 Score =  795 bits (401), Expect = 0.0
 Identities = 426/431 (98%), Gaps = 5/431 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaat 59
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4823 ttcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaat 4764

                                                                        
Query: 60   tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4763 tttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatg 4704

                                                                        
Query: 120  atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4703 atcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtac 4644

                                                                        
Query: 180  tggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggt 239
            ||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||
Sbjct: 4643 tggtacactagtatagcaagccactact---cgcgtacg-atctgagctgcctcagcggt 4588

                                                                        
Query: 240  cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4587 cgcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcg 4528

                                                                        
Query: 300  tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4527 tacacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacc 4468

                                                                        
Query: 360  tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4467 tcatcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctg 4408

                       
Query: 420  ctccacgccgt 430
            |||||||||||
Sbjct: 4407 ctccacgccgt 4397
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>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS
          Length = 1434

 Score =  400 bits (202), Expect = e-108
 Identities = 367/421 (87%), Gaps = 27/421 (6%)
 Strand = Plus / Minus

                                                                        
Query: 22   tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 81
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1381 tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagtt- 1323

                                                                        
Query: 82   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 141
            |||  |||||||||||| |||| |||||||| |||||||| |||||| |||||| |||||
Sbjct: 1322 ctacttacgcacacatgtgtgtgcgtatcaaatgcatgatgaatcgacgaagggagagcg 1263

                                                                        
Query: 142  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 201
            ||| ||| |||  ||||||||||| |||||||||  |    ||||||| |||||||| ||
Sbjct: 1262 tttacatctgccccccttccatcgtaaatcatacaca----tacactactatagcaaacc 1207

                                                                        
Query: 202  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 261
            ||||||| |||||||||| ||||||||||||||||||||||| |        ||||||||
Sbjct: 1206 actacta-tcgcgtacgcgtctgagctgcctcagcggtcgcacc--------ccaaccca 1156

                                                                        
Query: 262  agccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg------ 315
            |||||||||||||||||||||||| |||||||||||| ||||||||||||||||      
Sbjct: 1155 agccctgtacaatacataatgtgcacatacgtacggcatacacgctcttatacgcgtgta 1096

                                                                        
Query: 316  cgcgcgcgtacgtacggacatacgggcactaggta-------gctgctacctcatcagaa 368
            |||||||||||| |||||||||||| |||||| ||       || |||| ||||||||||
Sbjct: 1095 cgcgcgcgtacggacggacatacggacactagctacgcatacgcagctagctcatcagaa 1036

                                                                        
Query: 369  gctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctccacgcc 428
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1035 gctgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctccacgcc 976

             
Query: 429  g 429
            |
Sbjct: 975  g 975
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>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS
          Length = 1426

 Score =  385 bits (194), Expect = e-104
 Identities = 365/421 (86%), Gaps = 27/421 (6%)
 Strand = Plus / Minus

                                                                        
Query: 22   tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 81
            |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1395 tattattttggacaaattccgtcaaattttgacgaaattttgaaccctacaatatagttc 1336

                                                                        
Query: 82   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 141
             ||  |||||||||||| ||||||||||||| || ||||| |||||| |||||| |||||
Sbjct: 1335 -tacttacgcacacatgtgtgtacgtatcaaatgtatgatgaatcgacgaagggagagcg 1277

                                                                        
Query: 142  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 201
            ||| ||| |||||||||||||||| |||||||||  |    ||||||| || ||||| ||
Sbjct: 1276 tttacatctgcttcccttccatcgtaaatcatacaca----tacactactacagcaaacc 1221

                                                                        
Query: 202  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 261
            ||||||| | |||||||||||||||||||||||||||||||| |        ||||||||
Sbjct: 1220 actacta-tagcgtacgcatctgagctgcctcagcggtcgcacc--------ccaaccca 1170

                                                                        
Query: 262  agccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg------ 315
            | |||||||||||||||||||||| ||||||||| || ||||||||||||||||      
Sbjct: 1169 aaccctgtacaatacataatgtgcacatacgtaccgcatacacgctcttatacgcgtgta 1110

                                                                        
Query: 316  cgcgcgcgtacgtacggacatacgggcactaggta-------gctgctacctcatcagaa 368
            ||||||||||||||||||||||||| |||||| ||       || |||| ||||||||||
Sbjct: 1109 cgcgcgcgtacgtacggacatacggacactagctacgcatacgcagctagctcatcagaa 1050

                                                                        
Query: 369  gctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctccacgcc 428
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1049 gctgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctccacgcc 990

             
Query: 429  g 429
            |
Sbjct: 989  g 989
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>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase
          Length = 1448

 Score =  137 bits (69), Expect = 3e-29
 Identities = 69/69 (100%)
 Strand = Plus / Minus

                                                                        
Query: 362  atcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgct 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 atcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgct 974

                     
Query: 422  ccacgccgt 430
            |||||||||
Sbjct: 973  ccacgccgt 965



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 275  acataatgtgcgcatacgtacggcgtacacgctcttatacgc 316
            ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 1139 acataatgtgcacatacgtac-gcgtacacgcccttatacgc 1099
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>gb|AY109289.1| Zea mays PCO135820 mRNA sequence
          Length = 976

 Score =  133 bits (67), Expect = 5e-28
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                       
Query: 363 tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 423

                  
Query: 423 cacgccg 429
           |||||||
Sbjct: 422 cacgccg 416
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>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2)
            gene, intron 1
          Length = 5159

 Score =  117 bits (59), Expect = 3e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 422
            ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4992 tcagaagttgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctc 4933

                   
Query: 423  cacgccg 429
            |||||||
Sbjct: 4932 cacgccg 4926
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>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase
            mRNA, complete cds
          Length = 1579

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 361  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1118 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1059

                     
Query: 421  tccacgccg 429
            || ||||||
Sbjct: 1058 tcgacgccg 1050
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                         
Query: 361   catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 93193 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 93252

                      
Query: 421   tccacgccg 429
             || ||||||
Sbjct: 93253 tcgacgccg 93261
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>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase
          Length = 6614

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 361  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 5440 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 5381

                     
Query: 421  tccacgccg 429
            || ||||||
Sbjct: 5380 tcgacgccg 5372
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                            
Query: 361      catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 17962444 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 17962503

                         
Query: 421      tccacgccg 429
                || ||||||
Sbjct: 17962504 tcgacgccg 17962512
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>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds
          Length = 1573

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 361  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1104 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1045

                     
Query: 421  tccacgccg 429
            || ||||||
Sbjct: 1044 tcgacgccg 1036
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>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full
            insert sequence
          Length = 1606

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 361  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1138 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1079

                     
Query: 421  tccacgccg 429
            || ||||||
Sbjct: 1078 tcgacgccg 1070
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>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full
            insert sequence
          Length = 1565

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 361  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 420
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1134 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1075

                     
Query: 421  tccacgccg 429
            || ||||||
Sbjct: 1074 tcgacgccg 1066
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>ref|XM_475161.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score =  109 bits (55), Expect = 8e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 363  tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 422
            ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1005 tcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgctc 946

                   
Query: 423  cacgccg 429
             ||||||
Sbjct: 945  gacgccg 939
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>ref|NM_189726.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 966

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 tggggtagaagagcccccagttctgctccacgccg 429
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 922 tggggtagaagaggccccaattctgctccacgccg 888
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 395      tggggtagaagagcccccagttctgctccacgccg 429
                ||||||||||||| ||||| |||||||||||||||
Sbjct: 41390527 tggggtagaagaggccccaattctgctccacgccg 41390561
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>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432C03
          Length = 164394

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 395   tggggtagaagagcccccagttctgctccacgccg 429
             ||||||||||||| ||||| |||||||||||||||
Sbjct: 82020 tggggtagaagaggccccaattctgctccacgccg 82054
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>dbj|AK063126.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F01, full
           insert sequence
          Length = 494

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 395 tggggtagaagagcccccagttctgctccacgccg 429
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 377 tggggtagaagaggccccaattctgctccacgccg 343
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>gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minicircle DNA, partial
           sequence
          Length = 322

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 44  caagttttgacgaaattttgaacccta 70
           |||||||| ||||||||||||||||||
Sbjct: 263 caagttttcacgaaattttgaacccta 237
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 9      tatatttatactttattatttt 30
              ||||||||||||||||||||||
Sbjct: 824739 tatatttatactttattatttt 824718
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>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     aattttgaaccctacaatata 77
              |||||||||||||||||||||
Sbjct: 195991 aattttgaaccctacaatata 196011
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>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 271   caatacataatgtgcgcatac 291
             |||||||||||||||||||||
Sbjct: 45217 caatacataatgtgcgcatac 45237
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   catcccaagttcccaacccaa 262
             |||||||||||||||||||||
Sbjct: 25470 catcccaagttcccaacccaa 25490
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>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence
          Length = 174507

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     aattttgaaccctacaatata 77
              |||||||||||||||||||||
Sbjct: 159500 aattttgaaccctacaatata 159480
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 242     catcccaagttcccaacccaa 262
               |||||||||||||||||||||
Sbjct: 3431515 catcccaagttcccaacccaa 3431535
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>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence
          Length = 163994

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     atatatttatactttattatt 28
             |||||||||||||||||||||
Sbjct: 61869 atatatttatactttattatt 61849
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>gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like repeat region
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 242 catcccaagttcccaacccaa 262
           |||||||||||||||||||||
Sbjct: 825 catcccaagttcccaacccaa 805
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 242     catcccaagttcccaacccaa 262
               |||||||||||||||||||||
Sbjct: 3440219 catcccaagttcccaacccaa 3440239
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
              sequence
          Length = 182054

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    caatacataatgtgcgcatac 291
              |||||||||||||||||||||
Sbjct: 176184 caatacataatgtgcgcatac 176164
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>gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome 12, complete sequence
          Length = 190088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    actttattattttggacaaa 37
             ||||||||||||||||||||
Sbjct: 57061 actttattattttggacaaa 57042
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>gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, complete sequence
          Length = 203141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ccaagttcccaacccaagcc 265
             ||||||||||||||||||||
Sbjct: 97502 ccaagttcccaacccaagcc 97521
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 244      tcccaagttcccaacccaag 263
                ||||||||||||||||||||
Sbjct: 34127748 tcccaagttcccaacccaag 34127729
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>emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in linkage group 18,
             complete sequence
          Length = 100610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     atatatttatactttattat 27
             ||||||||||||||||||||
Sbjct: 68899 atatatttatactttattat 68880
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>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence
          Length = 164194

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    accctacaatatagttccta 84
             ||||||||||||||||||||
Sbjct: 94347 accctacaatatagttccta 94366
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>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete
             sequence
          Length = 121958

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tatttatactttattatttt 30
             ||||||||||||||||||||
Sbjct: 40699 tatttatactttattatttt 40680
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>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1
              Contains a zinc-finger protein pseudogene and a novel
              pseudogene, complete sequence
          Length = 129723

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    tcccaagttcccaacccaag 263
              ||||||||||||||||||||
Sbjct: 114305 tcccaagttcccaacccaag 114324
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>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
              Vamp2 gene for vesicle-associated membrane 2, the Per1 gene
              for period homolog 1 (Drosophila), the Hes7 gene for hairy
              and enhancer of split 7 (Drosophila), the Aloxe3 gene for
              arachidonate lipoxygenase 3, the Alox12b gene for
              arachidonate 12-lipoxygenase 12R type, the Alox15b gene for
              arachidonate 15-lipoxygenase second type, the Gucy2e gene
              for guanylate cyclase 2e, a novel gene, the gene for
              LYST-interacting protein LIP8 (Lip8-pending), the gene for
              the likely ortholog of H. sapiens trafficking protein
              particle complex 1 (TRAPPC1)), the Kcnab3 gene for
              potassium voltage-gated channel shaker-related subfamily
              beta member 3, a novel gene, the 3' end of the Chd3 gene
              for chromodomain helicase DNA binding protein 3 and six CpG
              islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     aaccctacaatatagttcct 83
              ||||||||||||||||||||
Sbjct: 121051 aaccctacaatatagttcct 121070
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>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4
          Length = 347050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      atatatttatactttattattttg 31
              ||||||||||| ||||||||||||
Sbjct: 214537 atatatttatattttattattttg 214560
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>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7
          Length = 281000

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ccaagttcccaacccaagcc 265
              ||||||||||||||||||||
Sbjct: 125367 ccaagttcccaacccaagcc 125348
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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     atatatttatactttattat 27
             ||||||||||||||||||||
Sbjct: 93960 atatatttatactttattat 93941
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>gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, complete sequence
          Length = 168505

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     tttatactttattattttgg 32
              ||||||||||||||||||||
Sbjct: 143723 tttatactttattattttgg 143704
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>dbj|AB035418.1| Bombyx mori mRNA for serine protease zymogen (proBAEEase), complete
            cds
          Length = 2102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gatatatttatactttatta 26
            ||||||||||||||||||||
Sbjct: 2064 gatatatttatactttatta 2045
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>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    attattttggacaaatttcgtcaa 46
             ||||||||||||||||||| ||||
Sbjct: 22782 attattttggacaaatttcctcaa 22805
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   catcccaagttcccaaccca 261
             ||||||||||||||||||||
Sbjct: 31976 catcccaagttcccaaccca 31957
to top
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    ctttattattttggacaaat 38
             ||||||||||||||||||||
Sbjct: 86054 ctttattattttggacaaat 86035
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 242      catcccaagttcccaaccca 261
                ||||||||||||||||||||
Sbjct: 21717293 catcccaagttcccaaccca 21717274
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 244      tcccaagttcccaacccaag 263
                ||||||||||||||||||||
Sbjct: 34218220 tcccaagttcccaacccaag 34218201
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>gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, complete sequence
          Length = 185563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   agcccccagttctgctccac 425
             ||||||||||||||||||||
Sbjct: 61936 agcccccagttctgctccac 61917
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tcccaagttcccaacccaag 263
             ||||||||||||||||||||
Sbjct: 91560 tcccaagttcccaacccaag 91541
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>ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal giant larvae homolog
           2 (LOC360661), mRNA
          Length = 8565

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 225 agctgcctcagcggtcgcat 244
           ||||||||||||||||||||
Sbjct: 773 agctgcctcagcggtcgcat 792
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>gb|AY061936.1| Bombyx mori prophenoloxidase activating factor 3 (PPAE-3) mRNA,
            complete cds
          Length = 2096

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gatatatttatactttatta 26
            ||||||||||||||||||||
Sbjct: 2058 gatatatttatactttatta 2039
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>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     aattttgaaccctacaatatagtt 80
              |||||||||||||||||| |||||
Sbjct: 114656 aattttgaaccctacaatgtagtt 114679
to top
>emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in linkage group 10,
             complete sequence
          Length = 183367

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    atatttatactttattattt 29
             ||||||||||||||||||||
Sbjct: 52601 atatttatactttattattt 52620
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 242      catcccaagttcccaaccca 261
                ||||||||||||||||||||
Sbjct: 21728956 catcccaagttcccaaccca 21728937
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>gb|DQ157441.1| Bombyx mori pro-BAEEase mRNA, complete cds
          Length = 2102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gatatatttatactttatta 26
            ||||||||||||||||||||
Sbjct: 2064 gatatatttatactttatta 2045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,184,317
Number of Sequences: 3902068
Number of extensions: 3184317
Number of successful extensions: 58952
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58669
Number of HSP's gapped (non-prelim): 275
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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