Clone Name | rbasd14a09 |
---|---|
Clone Library Name | barley_pub |
>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)| (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 Score = 50.8 bits (120), Expect = 1e-06 Identities = 20/21 (95%), Positives = 21/21 (100%) Frame = -1 Query: 427 GVEQNWGLFYPNMQHVYPISF 365 GVEQNWGLFYPNMQHVYPI+F Sbjct: 292 GVEQNWGLFYPNMQHVYPINF 312
>E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) Length = 316 Score = 35.0 bits (79), Expect = 0.075 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -1 Query: 430 DGVEQNWGLFYPNMQHVYPISF 365 D VE+N+GLF+PN Q VYP +F Sbjct: 293 DEVERNFGLFFPNKQPVYPTTF 314
>E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GVI precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) Length = 321 Score = 32.7 bits (73), Expect = 0.37 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 Query: 430 DGVEQNWGLFYPNMQHVYPISF 365 +GVEQN+G+F P+M VY + F Sbjct: 295 EGVEQNFGMFQPDMSQVYHVDF 316
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 32.3 bits (72), Expect = 0.49 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -1 Query: 421 EQNWGLFYPNMQHVYPISF**GSS 350 E+NWG+ +PN VYP+S GSS Sbjct: 329 ERNWGILFPNGTSVYPLSLSGGSS 352
>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)| Length = 804 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 286 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 179 A I +CT GLG+ W +TA + VV+AC +P Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638
>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII) ((1->3)-beta-glucanase isoenzyme GIII) (Beta-1,3-endoglucanase GIII) Length = 330 Score = 29.6 bits (65), Expect = 3.2 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -1 Query: 430 DGVEQNWGLFYPNMQHVYPISF 365 D +E+N+GLF PNM Y I+F Sbjct: 309 DELEKNFGLFKPNMSPAYAITF 330
>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)| Length = 310 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -1 Query: 184 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 47 VPV+++F+ +AY +D ++ YTH+ P FK+S+K Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159
>THT1_SCHPO (Q09684) Nuclear fusion protein tht1| Length = 577 Score = 29.3 bits (64), Expect = 4.1 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 131 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 235 RGS C +E+ + W+ S SH++ HL L+ Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148
>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 370 Score = 28.9 bits (63), Expect = 5.4 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -1 Query: 424 VEQNWGLFYPNMQHVYPISF 365 +E+++G+FYPN Q YP F Sbjct: 327 LEKHFGVFYPNKQKKYPFGF 346
>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) Length = 327 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = -1 Query: 421 EQNWGLFYPNMQHVYPISF 365 E+++GLFYPN + VY I+F Sbjct: 290 ERHFGLFYPNKRPVYHINF 308
>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4| glucanase) Length = 370 Score = 28.5 bits (62), Expect = 7.1 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -1 Query: 424 VEQNWGLFYPNMQHVYPISF 365 +E+++GLF PN Q YP+SF Sbjct: 327 LEKHFGLFSPNKQPKYPLSF 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,817,882 Number of Sequences: 219361 Number of extensions: 1126708 Number of successful extensions: 2412 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2412 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)