ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC... 837 0.0
2emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(E... 809 0.0
3emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-gluc... 793 0.0
4emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS 400 e-108
5emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA,... 385 e-104
6emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase 137 3e-29
7gb|AY109289.1| Zea mays PCO135820 mRNA sequence 133 5e-28
8gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-gluc... 117 3e-23
9gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1... 113 5e-22
10gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
11emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase 113 5e-22
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
13gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, comple... 113 5e-22
14dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
15dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 5e-22
16ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predic... 109 8e-21
17ref|NM_189726.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
19dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
20dbj|AK063126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
21gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minici... 46 0.094
22gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome 44 0.37
23gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome ... 42 1.5
24gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 42 1.5
25gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
26gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosom... 42 1.5
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
28gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, comple... 42 1.5
29gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like re... 42 1.5
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
31emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 42 1.5
32gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome... 40 5.8
33gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, comp... 40 5.8
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
35emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in... 40 5.8
36gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, comple... 40 5.8
37emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chro... 40 5.8
38emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7... 40 5.8
39emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 5.8
40emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chrom... 40 5.8
41emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 b... 40 5.8
42gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 40 5.8
43gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, compl... 40 5.8
44dbj|AB035418.1| Bombyx mori mRNA for serine protease zymogen (pr... 40 5.8
45gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 5.8
46gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 40 5.8
47gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Can... 40 5.8
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
50gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, c... 40 5.8
51gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 40 5.8
52ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal ... 40 5.8
53gb|AY061936.1| Bombyx mori prophenoloxidase activating factor 3 ... 40 5.8
54emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in... 40 5.8
55emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in... 40 5.8
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
57gb|DQ157441.1| Bombyx mori pro-BAEEase mRNA, complete cds 40 5.8 
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
          Length = 6260

 Score =  837 bits (422), Expect = 0.0
 Identities = 429/430 (99%), Gaps = 1/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaatt 59
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5833 tcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaatt 5774

                                                                        
Query: 60   ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5773 ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 5714

                                                                        
Query: 120  tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5713 tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 5654

                                                                        
Query: 180  ggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggtc 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5653 ggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggtc 5594

                                                                        
Query: 240  gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5593 gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 5534

                                                                        
Query: 300  acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5533 acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 5474

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5473 catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 5414

                      
Query: 420  tccacgccgt 429
            ||||||||||
Sbjct: 5413 tccacgccgt 5404
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>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
          Length = 4643

 Score =  809 bits (408), Expect = 0.0
 Identities = 426/430 (99%), Gaps = 4/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaatt 59
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4423 tcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaatt 4364

                                                                        
Query: 60   ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 4304

                                                                        
Query: 120  tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 4244

                                                                        
Query: 180  ggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggtc 239
            |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||
Sbjct: 4243 ggtacactagtatagcaagccactact---cgcgtacgcatctgagctgcctcagcggtc 4187

                                                                        
Query: 240  gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4186 gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 4127

                                                                        
Query: 300  acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4126 acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 4067

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4066 catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 4007

                      
Query: 420  tccacgccgt 429
            ||||||||||
Sbjct: 4006 tccacgccgt 3997
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>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
          Length = 4849

 Score =  793 bits (400), Expect = 0.0
 Identities = 425/430 (98%), Gaps = 5/430 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    tcgccgatatattt-atactttattattttggacaaatttcgtcaagttttgacgaaatt 59
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 tcgccgatatatttcatactttattattttggacaaatttcgtcaagttttgacgaaatt 4763

                                                                        
Query: 60   ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 ttgaaccctacaatatagttcctaggtacgcacacatgcgtgtacgtatcaagtgcatga 4703

                                                                        
Query: 120  tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 tcaatcgaggaagggggagcgtttgcatatgcttcccttccatcgaaaatcatacgtact 4643

                                                                        
Query: 180  ggtacactagtatagcaagccactactactcgcgtacgcatctgagctgcctcagcggtc 239
            |||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||
Sbjct: 4642 ggtacactagtatagcaagccactact---cgcgtacg-atctgagctgcctcagcggtc 4587

                                                                        
Query: 240  gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4586 gcatcccaagttcccaacccaagccctgtacaatacataatgtgcgcatacgtacggcgt 4527

                                                                        
Query: 300  acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4526 acacgctcttatacgcgcgcgcgtacgtacggacatacgggcactaggtagctgctacct 4467

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4466 catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 4407

                      
Query: 420  tccacgccgt 429
            ||||||||||
Sbjct: 4406 tccacgccgt 4397
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>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS
          Length = 1434

 Score =  400 bits (202), Expect = e-108
 Identities = 367/421 (87%), Gaps = 27/421 (6%)
 Strand = Plus / Minus

                                                                        
Query: 21   tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1381 tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagtt- 1323

                                                                        
Query: 81   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 140
            |||  |||||||||||| |||| |||||||| |||||||| |||||| |||||| |||||
Sbjct: 1322 ctacttacgcacacatgtgtgtgcgtatcaaatgcatgatgaatcgacgaagggagagcg 1263

                                                                        
Query: 141  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 200
            ||| ||| |||  ||||||||||| |||||||||  |    ||||||| |||||||| ||
Sbjct: 1262 tttacatctgccccccttccatcgtaaatcatacaca----tacactactatagcaaacc 1207

                                                                        
Query: 201  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 260
            ||||||| |||||||||| ||||||||||||||||||||||| |        ||||||||
Sbjct: 1206 actacta-tcgcgtacgcgtctgagctgcctcagcggtcgcacc--------ccaaccca 1156

                                                                        
Query: 261  agccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg------ 314
            |||||||||||||||||||||||| |||||||||||| ||||||||||||||||      
Sbjct: 1155 agccctgtacaatacataatgtgcacatacgtacggcatacacgctcttatacgcgtgta 1096

                                                                        
Query: 315  cgcgcgcgtacgtacggacatacgggcactaggta-------gctgctacctcatcagaa 367
            |||||||||||| |||||||||||| |||||| ||       || |||| ||||||||||
Sbjct: 1095 cgcgcgcgtacggacggacatacggacactagctacgcatacgcagctagctcatcagaa 1036

                                                                        
Query: 368  gctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctccacgcc 427
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1035 gctgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctccacgcc 976

             
Query: 428  g 428
            |
Sbjct: 975  g 975
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>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS
          Length = 1426

 Score =  385 bits (194), Expect = e-104
 Identities = 365/421 (86%), Gaps = 27/421 (6%)
 Strand = Plus / Minus

                                                                        
Query: 21   tattattttggacaaatttcgtcaagttttgacgaaattttgaaccctacaatatagttc 80
            |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1395 tattattttggacaaattccgtcaaattttgacgaaattttgaaccctacaatatagttc 1336

                                                                        
Query: 81   ctaggtacgcacacatgcgtgtacgtatcaagtgcatgatcaatcgaggaagggggagcg 140
             ||  |||||||||||| ||||||||||||| || ||||| |||||| |||||| |||||
Sbjct: 1335 -tacttacgcacacatgtgtgtacgtatcaaatgtatgatgaatcgacgaagggagagcg 1277

                                                                        
Query: 141  tttgcatatgcttcccttccatcgaaaatcatacgtactggtacactagtatagcaagcc 200
            ||| ||| |||||||||||||||| |||||||||  |    ||||||| || ||||| ||
Sbjct: 1276 tttacatctgcttcccttccatcgtaaatcatacaca----tacactactacagcaaacc 1221

                                                                        
Query: 201  actactactcgcgtacgcatctgagctgcctcagcggtcgcatcccaagttcccaaccca 260
            ||||||| | |||||||||||||||||||||||||||||||| |        ||||||||
Sbjct: 1220 actacta-tagcgtacgcatctgagctgcctcagcggtcgcacc--------ccaaccca 1170

                                                                        
Query: 261  agccctgtacaatacataatgtgcgcatacgtacggcgtacacgctcttatacg------ 314
            | |||||||||||||||||||||| ||||||||| || ||||||||||||||||      
Sbjct: 1169 aaccctgtacaatacataatgtgcacatacgtaccgcatacacgctcttatacgcgtgta 1110

                                                                        
Query: 315  cgcgcgcgtacgtacggacatacgggcactaggta-------gctgctacctcatcagaa 367
            ||||||||||||||||||||||||| |||||| ||       || |||| ||||||||||
Sbjct: 1109 cgcgcgcgtacgtacggacatacggacactagctacgcatacgcagctagctcatcagaa 1050

                                                                        
Query: 368  gctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctccacgcc 427
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1049 gctgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctccacgcc 990

             
Query: 428  g 428
            |
Sbjct: 989  g 989
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>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase
          Length = 1448

 Score =  137 bits (69), Expect = 3e-29
 Identities = 69/69 (100%)
 Strand = Plus / Minus

                                                                        
Query: 361  atcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 atcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgct 974

                     
Query: 421  ccacgccgt 429
            |||||||||
Sbjct: 973  ccacgccgt 965



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 39/42 (92%), Gaps = 1/42 (2%)
 Strand = Plus / Minus

                                                      
Query: 274  acataatgtgcgcatacgtacggcgtacacgctcttatacgc 315
            ||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 1139 acataatgtgcacatacgtac-gcgtacacgcccttatacgc 1099
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>gb|AY109289.1| Zea mays PCO135820 mRNA sequence
          Length = 976

 Score =  133 bits (67), Expect = 5e-28
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                       
Query: 362 tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 423

                  
Query: 422 cacgccg 428
           |||||||
Sbjct: 422 cacgccg 416
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>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2)
            gene, intron 1
          Length = 5159

 Score =  117 bits (59), Expect = 3e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 362  tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 421
            ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4992 tcagaagttgatggggtagacgtgctgcatgttggggtagaagagtccccagttctgctc 4933

                   
Query: 422  cacgccg 428
            |||||||
Sbjct: 4932 cacgccg 4926
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>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase
            mRNA, complete cds
          Length = 1579

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1118 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1059

                     
Query: 420  tccacgccg 428
            || ||||||
Sbjct: 1058 tcgacgccg 1050
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                         
Query: 360   catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 93193 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 93252

                      
Query: 420   tccacgccg 428
             || ||||||
Sbjct: 93253 tcgacgccg 93261
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>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase
          Length = 6614

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 5440 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 5381

                     
Query: 420  tccacgccg 428
            || ||||||
Sbjct: 5380 tcgacgccg 5372
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                            
Query: 360      catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 17962444 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 17962503

                         
Query: 420      tccacgccg 428
                || ||||||
Sbjct: 17962504 tcgacgccg 17962512
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>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds
          Length = 1573

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1104 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1045

                     
Query: 420  tccacgccg 428
            || ||||||
Sbjct: 1044 tcgacgccg 1036
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>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full
            insert sequence
          Length = 1606

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1138 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1079

                     
Query: 420  tccacgccg 428
            || ||||||
Sbjct: 1078 tcgacgccg 1070
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>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full
            insert sequence
          Length = 1565

 Score =  113 bits (57), Expect = 5e-22
 Identities = 66/69 (95%)
 Strand = Plus / Minus

                                                                        
Query: 360  catcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1134 catcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgc 1075

                     
Query: 420  tccacgccg 428
            || ||||||
Sbjct: 1074 tcgacgccg 1066
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>ref|XM_475161.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1005

 Score =  109 bits (55), Expect = 8e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 362  tcagaagctgatggggtagacgtgctgcatgttggggtagaagagcccccagttctgctc 421
            ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 1005 tcagaagctgatggggtagacgtgctgcatgttggggtagaagaggccccaattctgctc 946

                   
Query: 422  cacgccg 428
             ||||||
Sbjct: 945  gacgccg 939
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>ref|NM_189726.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 966

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 394 tggggtagaagagcccccagttctgctccacgccg 428
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 922 tggggtagaagaggccccaattctgctccacgccg 888
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 394      tggggtagaagagcccccagttctgctccacgccg 428
                ||||||||||||| ||||| |||||||||||||||
Sbjct: 41390527 tggggtagaagaggccccaattctgctccacgccg 41390561
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>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432C03
          Length = 164394

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 394   tggggtagaagagcccccagttctgctccacgccg 428
             ||||||||||||| ||||| |||||||||||||||
Sbjct: 82020 tggggtagaagaggccccaattctgctccacgccg 82054
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>dbj|AK063126.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F01, full
           insert sequence
          Length = 494

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 394 tggggtagaagagcccccagttctgctccacgccg 428
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 377 tggggtagaagaggccccaattctgctccacgccg 343
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>gb|AF241159.1| Trypanosoma cruzi clone FGz 73 kinetoplast minicircle DNA, partial
           sequence
          Length = 322

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 43  caagttttgacgaaattttgaacccta 69
           |||||||| ||||||||||||||||||
Sbjct: 263 caagttttcacgaaattttgaacccta 237
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>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome
          Length = 1545895

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 8      tatatttatactttattatttt 29
              ||||||||||||||||||||||
Sbjct: 824739 tatatttatactttattatttt 824718
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>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 56     aattttgaaccctacaatata 76
              |||||||||||||||||||||
Sbjct: 195991 aattttgaaccctacaatata 196011
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>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   caatacataatgtgcgcatac 290
             |||||||||||||||||||||
Sbjct: 45217 caatacataatgtgcgcatac 45237
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>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007B15 map S10318, complete sequence
          Length = 125243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 241   catcccaagttcccaacccaa 261
             |||||||||||||||||||||
Sbjct: 25470 catcccaagttcccaacccaa 25490
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>gb|AC132955.3| Mus musculus BAC clone RP24-266J20 from chromosome 6, complete sequence
          Length = 174507

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 56     aattttgaaccctacaatata 76
              |||||||||||||||||||||
Sbjct: 159500 aattttgaaccctacaatata 159480
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 241     catcccaagttcccaacccaa 261
               |||||||||||||||||||||
Sbjct: 3431515 catcccaagttcccaacccaa 3431535
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>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence
          Length = 163994

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     atatatttatactttattatt 27
             |||||||||||||||||||||
Sbjct: 61869 atatatttatactttattatt 61849
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>gb|AF433637.1| Oryza sativa clone OsMu10-1 transposon Mu-like repeat region
          Length = 1143

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 241 catcccaagttcccaacccaa 261
           |||||||||||||||||||||
Sbjct: 825 catcccaagttcccaacccaa 805
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 241     catcccaagttcccaacccaa 261
               |||||||||||||||||||||
Sbjct: 3440219 catcccaagttcccaacccaa 3440239
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
              sequence
          Length = 182054

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 270    caatacataatgtgcgcatac 290
              |||||||||||||||||||||
Sbjct: 176184 caatacataatgtgcgcatac 176164
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>gb|AC132446.3| Mus musculus BAC clone RP23-175K4 from chromosome 12, complete sequence
          Length = 190088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    actttattattttggacaaa 36
             ||||||||||||||||||||
Sbjct: 57061 actttattattttggacaaa 57042
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>gb|AC068006.10| Mus musculus chromosome 7, clone RP23-6I17, complete sequence
          Length = 203141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ccaagttcccaacccaagcc 264
             ||||||||||||||||||||
Sbjct: 97502 ccaagttcccaacccaagcc 97521
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 243      tcccaagttcccaacccaag 262
                ||||||||||||||||||||
Sbjct: 34127748 tcccaagttcccaacccaag 34127729
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>emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in linkage group 18,
             complete sequence
          Length = 100610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atatatttatactttattat 26
             ||||||||||||||||||||
Sbjct: 68899 atatatttatactttattat 68880
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>gb|AC108477.5| Homo sapiens BAC clone RP11-499F19 from 4, complete sequence
          Length = 164194

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    accctacaatatagttccta 83
             ||||||||||||||||||||
Sbjct: 94347 accctacaatatagttccta 94366
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>emb|AL583838.7| Human DNA sequence from clone RP11-536O4 on chromosome 6, complete
             sequence
          Length = 121958

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tatttatactttattatttt 29
             ||||||||||||||||||||
Sbjct: 40699 tatttatactttattatttt 40680
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>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1
              Contains a zinc-finger protein pseudogene and a novel
              pseudogene, complete sequence
          Length = 129723

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    tcccaagttcccaacccaag 262
              ||||||||||||||||||||
Sbjct: 114305 tcccaagttcccaacccaag 114324
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>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
              Vamp2 gene for vesicle-associated membrane 2, the Per1 gene
              for period homolog 1 (Drosophila), the Hes7 gene for hairy
              and enhancer of split 7 (Drosophila), the Aloxe3 gene for
              arachidonate lipoxygenase 3, the Alox12b gene for
              arachidonate 12-lipoxygenase 12R type, the Alox15b gene for
              arachidonate 15-lipoxygenase second type, the Gucy2e gene
              for guanylate cyclase 2e, a novel gene, the gene for
              LYST-interacting protein LIP8 (Lip8-pending), the gene for
              the likely ortholog of H. sapiens trafficking protein
              particle complex 1 (TRAPPC1)), the Kcnab3 gene for
              potassium voltage-gated channel shaker-related subfamily
              beta member 3, a novel gene, the 3' end of the Chd3 gene
              for chromodomain helicase DNA binding protein 3 and six CpG
              islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     aaccctacaatatagttcct 82
              ||||||||||||||||||||
Sbjct: 121051 aaccctacaatatagttcct 121070
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>emb|AL929351.1|PFA929351 Plasmodium falciparum strain 3D7, chromosome 5, segment 1/4
          Length = 347050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      atatatttatactttattattttg 30
              ||||||||||| ||||||||||||
Sbjct: 214537 atatatttatattttattattttg 214560
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>emb|AJ276505.2|MMU276505 Mus musculus genomic fragment, 281000 bp, chromosome 7
          Length = 281000

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    ccaagttcccaacccaagcc 264
              ||||||||||||||||||||
Sbjct: 125367 ccaagttcccaacccaagcc 125348
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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     atatatttatactttattat 26
             ||||||||||||||||||||
Sbjct: 93960 atatatttatactttattat 93941
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>gb|AC104457.2| Homo sapiens chromosome 1 clone RP5-837M10, complete sequence
          Length = 168505

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tttatactttattattttgg 31
              ||||||||||||||||||||
Sbjct: 143723 tttatactttattattttgg 143704
to top
>dbj|AB035418.1| Bombyx mori mRNA for serine protease zymogen (proBAEEase), complete
            cds
          Length = 2102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    gatatatttatactttatta 25
            ||||||||||||||||||||
Sbjct: 2064 gatatatttatactttatta 2045
to top
>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    attattttggacaaatttcgtcaa 45
             ||||||||||||||||||| ||||
Sbjct: 22782 attattttggacaaatttcctcaa 22805
to top
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   catcccaagttcccaaccca 260
             ||||||||||||||||||||
Sbjct: 31976 catcccaagttcccaaccca 31957
to top
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 183931

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ctttattattttggacaaat 37
             ||||||||||||||||||||
Sbjct: 86054 ctttattattttggacaaat 86035
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 241      catcccaagttcccaaccca 260
                ||||||||||||||||||||
Sbjct: 21717293 catcccaagttcccaaccca 21717274
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 243      tcccaagttcccaacccaag 262
                ||||||||||||||||||||
Sbjct: 34218220 tcccaagttcccaacccaag 34218201
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>gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, complete sequence
          Length = 185563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   agcccccagttctgctccac 424
             ||||||||||||||||||||
Sbjct: 61936 agcccccagttctgctccac 61917
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   tcccaagttcccaacccaag 262
             ||||||||||||||||||||
Sbjct: 91560 tcccaagttcccaacccaag 91541
to top
>ref|XM_573224.1| PREDICTED: Rattus norvegicus similar to Lethal giant larvae homolog
           2 (LOC360661), mRNA
          Length = 8565

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 agctgcctcagcggtcgcat 243
           ||||||||||||||||||||
Sbjct: 773 agctgcctcagcggtcgcat 792
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>gb|AY061936.1| Bombyx mori prophenoloxidase activating factor 3 (PPAE-3) mRNA,
            complete cds
          Length = 2096

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    gatatatttatactttatta 25
            ||||||||||||||||||||
Sbjct: 2058 gatatatttatactttatta 2039
to top
>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 56     aattttgaaccctacaatatagtt 79
              |||||||||||||||||| |||||
Sbjct: 114656 aattttgaaccctacaatgtagtt 114679
to top
>emb|BX663516.23| Zebrafish DNA sequence from clone DKEY-16F21 in linkage group 10,
             complete sequence
          Length = 183367

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     atatttatactttattattt 28
             ||||||||||||||||||||
Sbjct: 52601 atatttatactttattattt 52620
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 241      catcccaagttcccaaccca 260
                ||||||||||||||||||||
Sbjct: 21728956 catcccaagttcccaaccca 21728937
to top
>gb|DQ157441.1| Bombyx mori pro-BAEEase mRNA, complete cds
          Length = 2102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    gatatatttatactttatta 25
            ||||||||||||||||||||
Sbjct: 2064 gatatatttatactttatta 2045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,182,377
Number of Sequences: 3902068
Number of extensions: 3182377
Number of successful extensions: 58912
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58629
Number of HSP's gapped (non-prelim): 275
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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