ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13l08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY243565.1| Hordeum vulgare chloroplast Ndh complex operon, complete sequence Length = 1778 Score = 492 bits (248), Expect = e-136 Identities = 278/287 (96%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 316 gaaaatcaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaag 258 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 257 ggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagc 198 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 197 gtattcggaattgtacccaag-cccctcccatgggttctatacccgattcataactagaa 139 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 agcttctctggtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 79 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 78 ggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 32
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 484 bits (244), Expect = e-134 Identities = 277/287 (96%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 49947 gaaaatcaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaag 50005 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 50006 ggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagc 50065 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 50066 gtattcggaattgtacccaag-cccctcccatgggttctatacccgattcataactagaa 50124 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 50125 agcttctctggtccttcactaaccggggctaaaagtcctgaaatcgaaaatgccaaaata 50184 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 50185 ggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 50231
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 484 bits (244), Expect = e-134 Identities = 277/287 (96%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 544 gaaaatcaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaag 486 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 485 ggtatagaaagacggtttccacatcaaaaacaacaaaaacgagcgcaaacatataatagc 426 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 425 gtattcggaattgtacccaag-cccctcccatgggttctatacccgattcataactagaa 367 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 366 agcttctctggtccttcactaaccggggctaaaagtcctgaaatcgaaaatgccaaaata 307 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 306 ggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 260
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 412 bits (208), Expect = e-112 Identities = 267/286 (93%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 51919 aaaatgaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaagg 51977 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 51978 gtagagaaagactgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 52037 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 52038 tattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaa 52096 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 |||| | | ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 52097 gcttctctggtccttcactaaccggggctaaaagtcctgaaatccaaaataccaaaatag 52156 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 52157 gaataaggcttgctattattagaaatgtccaaaaaatatcatattc 52202
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 412 bits (208), Expect = e-112 Identities = 267/286 (93%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 114073 aaaatgaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaagg 114131 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 114132 gtagagaaagactgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 114191 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 114192 tattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaa 114250 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 |||| | | ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 114251 gcttctctggtccttcactaaccggggctaaaagtcctgaaatccaaaataccaaaatag 114310 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 114311 gaataaggcttgctattattagaaatgtccaaaaaatatcatattc 114356
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 412 bits (208), Expect = e-112 Identities = 267/286 (93%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 51908 aaaatgaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaagg 51966 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 51967 gtagagaaagactgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 52026 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 52027 tattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaa 52085 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 |||| | | ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 52086 gcttctctggtccttcactaaccggggctaaaagtcctgaaatccaaaataccaaaatag 52145 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 52146 gaataaggcttgctattattagaaatgtccaaaaaatatcatattc 52191
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 412 bits (208), Expect = e-112 Identities = 267/286 (93%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52446 aaaatgaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaagg 52504 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 52505 gtagagaaagactgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 52564 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 52565 tattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaa 52623 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 |||| | | ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 52624 gcttctctggtccttcactaaccggggctaaaagtcctgaaatccaaaataccaaaatag 52683 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 52684 gaataaggcttgctattattagaaatgtccaaaaaatatcatattc 52729
>emb|X17438.1|CHZMNPOO Maize chloroplast ndhC, psbG genes for NDH-C, PSII-G and ORF159 Length = 1933 Score = 406 bits (205), Expect = e-110 Identities = 266/286 (93%), Gaps = 2/286 (0%) Strand = Plus / Minus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 385 aaaatgaaagcttcgataaaaacgg-atacacccaatacgtcgaaactcattgcccaagg 327 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 326 gtagagaaagactgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 267 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 |||||||||||||| ||||| |||| ||||||||| |||||||||| ||||||||||||| Sbjct: 266 tattcggaattgtaaccaagccccc-cccatgggttctatacccgantcataactagaaa 208 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 |||| | | ||||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 207 gcttctctggtccttcactaaccggggctaaaagtcctgaaatccaaaataccaaaatag 148 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 147 gaataaggcttgctattattagaaatgtccaaaaaatatcatattc 102
>ref|NM_197447.1| Oryza sativa (japonica cultivar-group) NADH dehydrogenase ND3 (OSJNBb0005J14.29), mRNA Length = 363 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 300 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 242 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 241 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 182 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 181 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 123 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 122 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 63 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 62 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 16
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 49356 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 49414 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 49415 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 49474 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 49475 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 49533 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 49534 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 49593 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 49594 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 49640
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 49356 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 49414 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 49415 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 49474 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 49475 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 49533 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 49534 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 49593 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 49594 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 49640
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 49304 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 49362 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 49363 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 49422 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 49423 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 49481 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 49482 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 49541 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 49542 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 49588
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 49363 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 49421 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 49422 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 49481 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 49482 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 49540 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 49541 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 49600 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 49601 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 49647
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 11285518 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 11285576 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 11285577 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 11285636 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 11285637 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 11285695 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 11285696 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 11285755 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11285756 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 11285802 Score = 363 bits (183), Expect = 2e-97 Identities = 263/288 (91%), Gaps = 4/288 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 5608394 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 5608452 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 5608453 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 5608512 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct: 5608513 gtattcggaattgtaaccaagcccc--cccatgggttctatacccgattcataactagaa 5608570 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgc-caaaat 239 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| ||||| Sbjct: 5608571 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaat 5608630 Query: 240 aggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5608631 aggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 5608678
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 19945246 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 19945188 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 19945187 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 19945128 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 19945127 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 19945069 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 19945068 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 19945009 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19945008 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 19944962 Score = 377 bits (190), Expect = e-101 Identities = 263/287 (91%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 10341167 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 10341225 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 10341226 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 10341285 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 10341286 gtattcggaattgtaaccaagccccc--ccatgggttctatacccgattcataactagaa 10341343 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 10341344 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 10341403 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10341404 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 10341450
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 40797 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 40855 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 40856 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 40915 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 40916 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 40974 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 40975 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 41034 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 41035 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 41081
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 19956522 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 19956464 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 19956463 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 19956404 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 19956403 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 19956345 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 19956344 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 19956285 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 19956284 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 19956238 Score = 377 bits (190), Expect = e-101 Identities = 263/287 (91%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 10347206 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 10347264 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 10347265 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 10347324 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 10347325 gtattcggaattgtaaccaagccccc--ccatgggttctatacccgattcataactagaa 10347382 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 10347383 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 10347442 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 10347443 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 10347489
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 11285189 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 11285247 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 11285248 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 11285307 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 11285308 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 11285366 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 11285367 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 11285426 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11285427 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 11285473 Score = 363 bits (183), Expect = 2e-97 Identities = 263/288 (91%), Gaps = 4/288 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 5608383 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 5608441 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 5608442 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 5608501 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct: 5608502 gtattcggaattgtaaccaagcccc--cccatgggttctatacccgattcataactagaa 5608559 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgc-caaaat 239 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| ||||| Sbjct: 5608560 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaat 5608619 Query: 240 aggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5608620 aggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 5608667
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 86536 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 86478 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 86477 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 86418 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 86417 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 86359 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 86358 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 86299 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86298 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 86252
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 383 bits (193), Expect = e-103 Identities = 264/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 49283 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 49341 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 49342 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 49401 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 49402 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 49460 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 49461 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 49520 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 49521 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 49567
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 377 bits (190), Expect = e-101 Identities = 263/287 (91%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 47559 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 47617 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 47618 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 47677 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 47678 gtattcggaattgtaaccaagccccc--ccatgggttctatacccgattcataactagaa 47735 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 47736 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 47795 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 47796 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 47842
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 377 bits (190), Expect = e-101 Identities = 263/287 (91%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 122492 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 122550 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 122551 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 122610 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 122611 gtattcggaattgtaaccaagccccc--ccatgggttctatacccgattcataactagaa 122668 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| |||||| Sbjct: 122669 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaata 122728 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 122729 ggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 122775
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 363 bits (183), Expect = 2e-97 Identities = 263/288 (91%), Gaps = 4/288 (1%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 44491 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 44433 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 44432 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 44373 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct: 44372 gtattcggaattgtaaccaagcccc--cccatgggttctatacccgattcataactagaa 44315 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgc-caaaat 239 ||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| ||||| Sbjct: 44314 agcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaaat 44255 Query: 240 aggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 44254 aggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 44207
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 359 bits (181), Expect = 3e-96 Identities = 261/287 (90%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 161862 aaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaagg 161920 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 161921 gtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 161980 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| |||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 161981 tattcagaattgtaaccaagcccccccccatgggttctatacccgattcataactagaaa 162040 Query: 182 gcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaata 240 |||| | | ||||||||| |||||| || |||||| |||||||| ||||||| |||||| Sbjct: 162041 gcttctctggtccttcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaata 162100 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 162101 ggaataaggcttgctattattagaaatgcccaaaaaatattatattc 162147
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08, complete sequence Length = 141899 Score = 359 bits (181), Expect = 3e-96 Identities = 261/287 (90%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 124910 aaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaagg 124852 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 124851 gtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 124792 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| |||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 124791 tattcagaattgtaaccaagcccccccccatgggttctatacccgattcataactagaaa 124732 Query: 182 gcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaata 240 |||| | | ||||||||| |||||| || |||||| |||||||| ||||||| |||||| Sbjct: 124731 gcttctctggtccttcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaata 124672 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 124671 ggaataaggcttgctattattagaaatgcccaaaaaatattatattc 124625
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 359 bits (181), Expect = 3e-96 Identities = 261/287 (90%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 14047982 aaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaagg 14048040 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 14048041 gtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 14048100 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| |||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 14048101 tattcagaattgtaaccaagcccccccccatgggttctatacccgattcataactagaaa 14048160 Query: 182 gcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaata 240 |||| | | ||||||||| |||||| || |||||| |||||||| ||||||| |||||| Sbjct: 14048161 gcttctctggtccttcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaata 14048220 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 14048221 ggaataaggcttgctattattagaaatgcccaaaaaatattatattc 14048267 Score = 355 bits (179), Expect = 5e-95 Identities = 259/285 (90%), Gaps = 2/285 (0%) Strand = Plus / Plus Query: 3 aaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaaggg 62 |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| || Sbjct: 23634943 aaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaaagg 23635001 Query: 63 tatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgt 122 || |||||||| | ||| |||| ||||||||||||||| ||||||||||| ||||||||| Sbjct: 23635002 tagagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgt 23635061 Query: 123 attcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaag 182 ||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 23635062 attcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaag 23635120 Query: 183 cttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatagg 242 ||| | | ||||||||| |||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 23635121 cttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataga 23635180 Query: 243 aataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 23635181 aataaggcttgctattattagaaatgcccaaaaaatatcatattc 23635225 Score = 355 bits (179), Expect = 5e-95 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 9748977 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 9748919 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 9748918 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 9748859 Query: 121 gtattcggaattgtacccaag---ncccctcccatgggtgctatacccgattcataacta 177 ||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 9748858 gtattcggaattgtaaccaagccccccccccccatgggttctatacccgattcataacta 9748799 Query: 178 gaaagcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaa 236 |||||||| | | ||||||||| |||||| || |||||| |||||||| ||||||| || Sbjct: 9748798 gaaagcttctctggtccttcacaaaccggagcttaaaagtgctgaaatccaaaatgctaa 9748739 Query: 237 aataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 9748738 aataggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 9748688
>dbj|AK069240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F18, full insert sequence Length = 3557 Score = 359 bits (181), Expect = 3e-96 Identities = 261/287 (90%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 1759 aaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaagg 1701 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| |||||||| | |||||||| ||||||||||||||| ||||||||||| |||||||| Sbjct: 1700 gtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagcg 1641 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| |||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 1640 tattcagaattgtaaccaagcccccccccatgggttctatacccgattcataactagaaa 1581 Query: 182 gcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaaaata 240 |||| | | ||||||||| |||||| || |||||| |||||||| ||||||| |||||| Sbjct: 1580 gcttctctggtccttcacgaaccggagcttaaaagtgctgaaatccaaaatgctaaaata 1521 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1520 ggaataaggcttgctattattagaaatgcccaaaaaatattatattc 1474
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 355 bits (179), Expect = 5e-95 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 81183 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 81125 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 81124 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 81065 Query: 121 gtattcggaattgtacccaag---ncccctcccatgggtgctatacccgattcataacta 177 ||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 81064 gtattcggaattgtaaccaagccccccccccccatgggttctatacccgattcataacta 81005 Query: 178 gaaagcttntntngtccttcactaaccggggc-taaaagccctgaaatcgaaaatgccaa 236 |||||||| | | ||||||||| |||||| || |||||| |||||||| ||||||| || Sbjct: 81004 gaaagcttctctggtccttcacaaaccggagcttaaaagtgctgaaatccaaaatgctaa 80945 Query: 237 aataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 80944 aataggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 80894
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 355 bits (179), Expect = 5e-95 Identities = 259/285 (90%), Gaps = 2/285 (0%) Strand = Plus / Plus Query: 3 aaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaaggg 62 |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| || Sbjct: 77624 aaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaaagg 77682 Query: 63 tatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgt 122 || |||||||| | ||| |||| ||||||||||||||| ||||||||||| ||||||||| Sbjct: 77683 tagagaaagaccgtttcgacatcaaaaacaacaaaaactagcgcaaacatgtaatagcgt 77742 Query: 123 attcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaag 182 ||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 77743 attcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaaag 77801 Query: 183 cttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatagg 242 ||| | | ||||||||| |||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 77802 cttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaaataga 77861 Query: 243 aataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 77862 aataaggcttgctattattagaaatgcccaaaaaatatcatattc 77906
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 351 bits (177), Expect = 8e-94 Identities = 264/292 (90%), Gaps = 6/292 (2%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 12589428 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 12589370 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 12589369 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 12589310 Query: 121 gtattcggaattgtacccaagncccct---cccatgggtgctatacccgattcataacta 177 ||||||||||||||| ||||| | ||| ||||||||| |||||||||||||||||||| Sbjct: 12589309 gtattcggaattgtaaccaagcctcctccccccatgggttctatacccgattcataacta 12589250 Query: 178 gaaagcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgc--ca 235 |||||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| | Sbjct: 12589249 gaaagcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaa 12589190 Query: 236 aaataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 12589189 aaataggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 12589138
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 351 bits (177), Expect = 8e-94 Identities = 264/292 (90%), Gaps = 6/292 (2%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 71741 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 71683 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 71682 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 71623 Query: 121 gtattcggaattgtacccaagncccct---cccatgggtgctatacccgattcataacta 177 ||||||||||||||| ||||| | ||| ||||||||| |||||||||||||||||||| Sbjct: 71622 gtattcggaattgtaaccaagcctcctccccccatgggttctatacccgattcataacta 71563 Query: 178 gaaagcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgc--ca 235 |||||||| | | ||||||||| |||||| |||||||| |||||||| ||||||| | Sbjct: 71562 gaaagcttctctggtccttcacgaaccggagctaaaagtgctgaaatccaaaatgctaaa 71503 Query: 236 aaataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 71502 aaataggaataaggcttgctattattagaaatgcccaaaaaatatcatattc 71451
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 278 bits (140), Expect = 9e-72 Identities = 197/215 (91%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 33553270 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 33553212 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 33553211 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 33553152 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 33553151 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 33553093 Query: 181 agcttntntngtccttcactaaccggggctaaaag 215 ||||| | | ||||||||| |||||| |||||||| Sbjct: 33553092 agcttctctggtccttcacgaaccggagctaaaag 33553058 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 33512946 tagcgtattcggaattgtaaccaag 33512970
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 278 bits (140), Expect = 9e-72 Identities = 197/215 (91%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 98467 gaaaatgaaagcttcgataaaaacgg-atatacccaatacgtcgaaactcattgcccaag 98409 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 |||| |||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct: 98408 ggtagagaaagaccgtttccacatcaaaaacaacaaaaactagcgcaaacatgtaatagc 98349 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 98348 gtattcggaattgtaaccaagccccc-cccatgggttctatacccgattcataactagaa 98290 Query: 181 agcttntntngtccttcactaaccggggctaaaag 215 ||||| | | ||||||||| |||||| |||||||| Sbjct: 98289 agcttctctggtccttcacgaaccggagctaaaag 98255 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 58143 tagcgtattcggaattgtaaccaag 58167
>gb|AY936342.1| Evolvulus glomeratus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1744 Score = 220 bits (111), Expect = 2e-54 Identities = 243/286 (84%), Gaps = 2/286 (0%) Strand = Plus / Minus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 ||||| |||||||||| ||| || | ||||||||||||| ||||||||||||||||| || Sbjct: 299 aaaatgaaagcttcgagaaatacag-atacacccaatacatcgaaactcattgcccatgg 241 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 ||| ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| || Sbjct: 240 gtaaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacg 181 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| ||||||| ||||| | | ||||| ||| ||||||| |||||||||||||||| Sbjct: 180 gattcgaaattgtaaccaag-catcgcccattggttctatacctgattcataactagaaa 122 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 | || | | | || | |||| ||||||||||| ||| |||||| |||| | |||||||| Sbjct: 121 gtttctctggccccttgctaatcggggctaaaaccccggaaatcaaaaaagtcaaaatag 62 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||||| | |||||||||||||| |||||||||||||||||| Sbjct: 61 gaataaggctggatattattagaaatgcccaaaaaatatcatattc 16
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 216 bits (109), Expect = 3e-53 Identities = 243/287 (84%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||| ||| ||||||||||||||||| | Sbjct: 51042 gaaaattaaagcttctataaatacag-atacacccagtacatcgaaactcattgcccatg 51100 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || |||||||| | ||| |||| ||||||||||||||| || |||||||| ||||||| Sbjct: 51101 gataaagaaagaccgtttcaacatcaaaaacaacaaaaactagagcaaacatgtaatagc 51160 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||||||||||| ||||| || ||||| ||| ||||||| |||||||||||||| Sbjct: 51161 ggattcggaattgtaaccaagcatcc-cccattggttctatacctgattcataactagag 51219 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | ||||||||| || ||||||||||| || ||||| ||||||||||||| Sbjct: 51220 agcttctctggtccttcacgaatcggggctaaaactccggaaattagaaatgccaaaata 51279 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||| | |||| |||||||||||||| ||| |||||||||||||| Sbjct: 51280 ggaatgacacttgatattattagaaatgcccagaaaatatcatattc 51326
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 214 bits (108), Expect = 1e-52 Identities = 243/287 (84%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||| ||||| ||||||||||||||||| | Sbjct: 52232 gaaaattaaagcttctataaatacag-atacacctaatacatcgaaactcattgcccatg 52290 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52291 gataaagaaaaactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 52350 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | ||||| ||| |||||||||||||||||||||| Sbjct: 52351 ggattcgaaattgtaaccaag-cattgcccattggttctatacccgattcataactagag 52409 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | |||| |||| ||||||||||| ||| ||||| |||||||||||||| Sbjct: 52410 agtttctctggccctttgctaatcggggctaaaaccccggaaatgaaaaatgccaaaata 52469 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||||||| |||| |||||||||||||| |||||||||||||||||| Sbjct: 52470 ggaataagacttgatattattagaaatgcccaaaaaatatcatattc 52516
>gb|AY936338.1| Jacquemontia tamnifolia NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1706 Score = 212 bits (107), Expect = 5e-52 Identities = 242/286 (84%), Gaps = 2/286 (0%) Strand = Plus / Minus Query: 2 aaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagg 61 |||||||||||||| ||||| || | ||| ||||||||| ||||||||||||||||| || Sbjct: 299 aaaatcaaagcttctataaatacag-atagacccaatacatcgaaactcattgcccatgg 241 Query: 62 gtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcg 121 || ||||| || | ||| |||| |||||||||||||||||| |||||||||||||| || Sbjct: 240 ataaagaaaaaccgtttcaacatcaaaaacaacaaaaacgagagcaaacatataataacg 181 Query: 122 tattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaa 181 ||||| ||||||| ||||| | | ||||||||| | ||||| |||||||||||||||| Sbjct: 180 gattcgaaattgtaaccaag-catcgcccatgggttcgataccggattcataactagaaa 122 Query: 182 gcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaatag 241 | || | | | |||| |||| ||||||||||| || |||||| |||| |||||||||| Sbjct: 121 gtttctctgggcctttgctaatcggggctaaaacgccggaaatcaaaaaagccaaaatag 62 Query: 242 gaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||| ||||| | |||||||||||||| |||||||||||||||||| Sbjct: 61 gaaacaggctggatattattagaaatgcccaaaaaatatcatattc 16
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 208 bits (105), Expect = 7e-51 Identities = 242/287 (84%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| |||| |||||||| ||||||||||| ||||| | Sbjct: 54896 gaaaattaaagcttctataaatacgg-atacgcccaatacatcgaaactcatggcccatg 54954 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| |||| ||| |||| ||||||||||||||| || |||||||| ||||||| Sbjct: 54955 gataaagaaaaacggtttcgacatcaaaaacaacaaaaactagggcaaacatgtaatagc 55014 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||||||||||| ||||| || ||||| ||| ||||||| |||||||||||||| Sbjct: 55015 ggattcggaattgtatccaagcatcc-cccattggttctatacctgattcataactagag 55073 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 | ||| | | |||||| ||||| ||||||||||| || ||||| ||||||||||||| Sbjct: 55074 accttttctggtccttgactaatcggggctaaaactccagaaattagaaatgccaaaata 55133 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| ||| |||||||||| ||| |||||||||||||| Sbjct: 55134 ggaataacacttgatatcattagaaatgcccagaaaatatcatattc 55180
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 208 bits (105), Expect = 7e-51 Identities = 242/287 (84%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 ||||||||||||||| | ||| |||| ||||||||||||| ||||||||||||||||| | Sbjct: 50687 gaaaatcaaagcttctagaaatacgg-atacacccaatacatcgaaactcattgcccatg 50745 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || |||||||| | ||| |||| ||||||||||||||| | |||||||||||||| | Sbjct: 50746 gataaagaaagaccgtttcaacatcaaaaacaacaaaaactaaagcaaacatataatatc 50805 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||||||||||||||||| || || || ||| ||||||||||||||||||||||| Sbjct: 50806 ggattcggaattgtacccaagcatcc-cctattggttctatacccgattcataactagaa 50864 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | ||||||| || |||||||||| || ||||| ||||||| |||||| Sbjct: 50865 agcttctcgggtccttccctcgttggggctaaaactccggaaattaaaaatgctaaaata 50924 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| ||||| |||||||| ||| |||||||||||||| Sbjct: 50925 ggaataacacttgatattagtagaaatgcccagaaaatatcatattc 50971
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 206 bits (104), Expect = 3e-50 Identities = 242/287 (84%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| ||||||||||||| ||||||||||||||||| | Sbjct: 54209 gaaaattaaagcttctataaatacgg-atacacccaatacatcgaaactcattgcccatg 54267 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| |||||| |||||||| || |||||||||||||| | Sbjct: 54268 gataaagaaaaaccgtttcaacatcaaaaacgacaaaaactagagcaaacatataataac 54327 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| ||||||||||||||||||||||| Sbjct: 54328 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgattcataactagaa 54386 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||||| ||||| ||| ||||||| || ||||| ||||||||||||| Sbjct: 54387 agtttctctggtcctttactaatcggagctaaaactccggaaataaaaaatgccaaaatg 54446 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| |||||||||||| | ||| |||||||||||||| Sbjct: 54447 ggaataacacttgatattattagaaaagcccagaaaatatcatattc 54493
>gb|AY936340.1| Falkia repens NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1715 Score = 200 bits (101), Expect = 2e-48 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 28 atacacccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaa 87 ||||||||||||| ||||||||||||||||| || || ||||| || | ||| |||| || Sbjct: 274 atacacccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaa 215 Query: 88 aaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccct 147 ||||||||||||| || |||||||||||||| || |||| ||||||| ||||| | | Sbjct: 214 aaacaacaaaaactagagcaaacatataataacggattctaaattgtaaccaag-catcg 156 Query: 148 cccatgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggg 207 ||||| ||| ||||||| ||||||||||||||||| || | | | |||| ||| |||| Sbjct: 155 cccattggttctatacctgattcataactagaaagtttctctggccctttgttaatcggg 96 Query: 208 gctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 267 ||||||| ||| ||||| |||| |||||||||||||||||||| | ||||||||||||| Sbjct: 95 gctaaaaccccggaaataaaaaaagccaaaataggaataaggctggatattattagaaat 36 Query: 268 gnccaaaaaatatcatattc 287 | |||||||||||||||||| Sbjct: 35 gcccaaaaaatatcatattc 16
>gb|AY936336.1| Operculina aequisepala NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1721 Score = 200 bits (101), Expect = 2e-48 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 28 atacacccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaa 87 ||||||||||||| ||||||||||||||||| || || ||||| || | ||| |||| || Sbjct: 274 atacacccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaa 215 Query: 88 aaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccct 147 ||||||||||||| || |||||||||||||| || ||||| ||||||| ||||| | | Sbjct: 214 aaacaacaaaaactagagcaaacatataataacggattcgaaattgtaaccaag-catcg 156 Query: 148 cccatgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggg 207 ||||| ||| ||||||| ||||||||||||||||| || | | | |||| |||| |||| Sbjct: 155 cccataggttctatacctgattcataactagaaagtttctctggccctttgctaatcggg 96 Query: 208 gctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 267 ||||||| ||| |||| |||| |||||||||||||||||||| | ||||||||||||| Sbjct: 95 gctaaaaccccggaaagaaaaaaagccaaaataggaataaggctggatattattagaaat 36 Query: 268 gnccaaaaaatatcatattc 287 | |||||||| ||||||||| Sbjct: 35 gcccaaaaaagatcatattc 16
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 192 bits (97), Expect = 4e-46 Identities = 240/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 ||||||||||||||| ||||| ||| |||| ||||||| || ||||||| ||||| | Sbjct: 53894 gaaaatcaaagcttctataaatacgt-atacgcccaatatatcaaaactcacggcccatg 53952 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || |||||||| | ||| |||| |||||||||||||||||| |||||||| ||||||| Sbjct: 53953 gataaagaaagaccgtttcgacatcaaaaacaacaaaaacgagagcaaacatgtaatagc 54012 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| || || || ||| ||||||||||||||||||| || Sbjct: 54013 ggattcgaaattgtatccaagcatcc-cctattggttctatacccgattcataactggag 54071 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 ||||| | | |||||||||||| |||||||||| ||| ||||| ||||||||||||| Sbjct: 54072 agcttctctggtccttcactaattggggctaaaaccccggaaattagaaatgccaaaata 54131 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| ||| |||||||||| ||| |||||||||||||| Sbjct: 54132 ggaataacacttgatatcattagaaatgcccagaaaatatcatattc 54178
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 192 bits (97), Expect = 4e-46 Identities = 235/280 (83%), Gaps = 2/280 (0%) Strand = Plus / Minus Query: 8 aaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagggtatag 67 |||||||| ||||| |||| |||| || ||||| |||||||||||||||||||| || || Sbjct: 11032 aaagcttctataaatacgg-atacccctaatacatcgaaactcattgcccaaggataaag 10974 Query: 68 aaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgtattcg 127 ||| || | ||| |||| |||||||||||||| ||| |||||||||||||| || ||||| Sbjct: 10973 aaaaaccgtttcaacatcaaaaacaacaaaaatgagagcaaacatataataacggattcg 10914 Query: 128 gaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaagcttnt 187 ||||||| ||||| | | || || ||| |||| |||||||||||||||||||| || | Sbjct: 10913 aaattgtaaccaag-catcacctattggttctattcccgattcataactagaaagtttct 10855 Query: 188 ntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataa 247 | |||| | |||| ||||||||||| || ||||| |||||||||||||||||||| Sbjct: 10854 ctggtcccttgctaatcggggctaaaattccagaaattagaaatgccaaaataggaataa 10795 Query: 248 ggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||||||||||||| |||||||||||||||||| Sbjct: 10794 aacttgatattattagaaatgcccaaaaaatatcatattc 10755
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 190 bits (96), Expect = 2e-45 Identities = 240/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 51535 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 51593 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 51594 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 51653 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 51654 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 51712 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 51713 agtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatgccaaaata 51772 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| ||| |||||||||||||| |||||||| ||||||||| Sbjct: 51773 ggaacaaggattgatattattagaaatgcccaaaaaaaatcatattc 51819
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 190 bits (96), Expect = 2e-45 Identities = 240/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 51454 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 51512 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 51513 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 51572 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 51573 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 51631 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 51632 agtttctctggccctttgctaatcggggctaacactccggaaatgaaaaatgccaaaata 51691 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 51692 ggaacaaggatggatattattagaaatgcccaaaaaaaatcatattc 51738
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 190 bits (96), Expect = 2e-45 Identities = 240/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 51450 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 51508 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 51509 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 51568 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 51569 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 51627 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 51628 agtttctctggccctttgctaatcggggctaacactccggaaatgaaaaatgccaaaata 51687 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 51688 ggaacaaggatggatattattagaaatgcccaaaaaaaatcatattc 51734
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 190 bits (96), Expect = 2e-45 Identities = 240/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| |||| |||||||| ||||||||||||||||| | Sbjct: 54422 gaaaattaaagcttctataaatacgg-atacccccaatacatcgaaactcattgcccatg 54480 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 54481 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 54540 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| ||||||| ||||||||||| ||| Sbjct: 54541 ggattcgaaattgtaaccaag-catcgcccattggttctatacctgattcataactcgaa 54599 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | |||| |||| ||||||||||| || ||||| ||||||||||||| Sbjct: 54600 agtttctctggccctttgctaatcggggctaaaattccggaaattmgaaatgccaaaata 54659 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| |||||||||||||| ||| |||||||||||||| Sbjct: 54660 ggaataacacttgatattattagaaatgcccagaaaatatcatattc 54706
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 184 bits (93), Expect = 1e-43 Identities = 218/260 (83%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 28 atacacccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaa 87 ||||||| ||||| ||||||||||||||||| || || ||||| || | |||||||| || Sbjct: 49605 atacacctaatacatcgaaactcattgcccatggataaagaaaaaccgtttccacatcaa 49664 Query: 88 aaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccct 147 ||||||||||||| || ||||||||||||||||| |||| ||||||| ||||| | | Sbjct: 49665 aaacaacaaaaacaagagcaaacatataatagcggattctaaattgtaaccaag-cgtca 49723 Query: 148 cccatgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggg 207 || || ||| ||||||| ||||||||||||||||| || | |||||| ||| |||| Sbjct: 49724 cctattggttctatacctgattcataactagaaagtttctccggtcctttgctactcggg 49783 Query: 208 gctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 267 ||||||| || ||||| ||||| |||||||||||||||| |||| |||||| |||||| Sbjct: 49784 gctaaaaatcccgaaatgaaaaataccaaaataggaataagacttgatattatcagaaat 49843 Query: 268 gnccaaaaaatatcatattc 287 | |||||||||||||||||| Sbjct: 49844 gcccaaaaaatatcatattc 49863
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 182 bits (92), Expect = 4e-43 Identities = 239/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 52374 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 52432 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52433 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 52492 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 52493 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 52551 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 52552 agtttctccggccctttgctaatcggggctaacactccggaaattaaaaatgccaaaata 52611 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 52612 ggaacaaggatagatattattagaaatgcccaaaaaaaatcatattc 52658
>gb|AY936344.1| Dinetus truncatus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1710 Score = 182 bits (92), Expect = 4e-43 Identities = 239/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| | ||| |||| ||||||||||||| ||||||||||||||||| | Sbjct: 300 gaaaatgaaagcttctagaaatacgg-atacacccaatacatcgaaactcattgcccatg 242 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| |||||||||||| || || |||||||||||||| | Sbjct: 241 gataaagaaaaaccgtttcaacatcaaaaacaacaaacactagagcaaacatataataac 182 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||| ||||| | | ||||| ||| ||||||| ||||||||||||||| Sbjct: 181 ggattctaaattgtaaccaag-catcgcccatcggttctatacctgattcataactagaa 123 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | || | |||| ||||||||||| || |||||| |||| ||||||||| Sbjct: 122 agtttctctggccccttgctaagcggggctaaaactccggaaatcaaaaaagccaaaata 63 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 62 ggaataaggatggatattattagaaatgcccaaaaaagatcatattc 16
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 182 bits (92), Expect = 4e-43 Identities = 239/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 51399 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 51457 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 51458 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 51517 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 51518 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 51576 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 51577 agtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatgccaaaata 51636 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 51637 ggaacaaggatggatattattagaaatgcccaaaaaaaatcatattc 51683
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 182 bits (92), Expect = 4e-43 Identities = 239/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 52372 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 52430 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52431 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 52490 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 52491 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 52549 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 52550 agtttctccggccctttgctaatcggggctaacactccggaaattaaaaatgccaaaata 52609 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 52610 ggaacaaggatagatattattagaaatgcccaaaaaaaatcatattc 52656
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 182 bits (92), Expect = 4e-43 Identities = 239/287 (83%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 52322 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 52380 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52381 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 52440 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 52441 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 52499 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 52500 agtttctccggccctttgctaatcggggctaacactccggaaattaaaaatgccaaaata 52559 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| | | |||||||||||||| |||||||| ||||||||| Sbjct: 52560 ggaacaaggatggatattattagaaatgcccaaaaaaaatcatattc 52606
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 176 bits (89), Expect = 3e-41 Identities = 217/260 (83%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 28 atacacccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaa 87 ||||||| ||||| || |||||||||||||| || || ||||| || | ||| |||| || Sbjct: 49984 atacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaa 50043 Query: 88 aaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccct 147 ||||||||||||| || ||||||||||||||||| |||| ||||||| ||||| | | Sbjct: 50044 aaacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaag-cgtcg 50102 Query: 148 cccatgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggg 207 || || ||| ||||||||||||||||||||||||| || | |||||| |||| ||| Sbjct: 50103 cctattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcgga 50162 Query: 208 gctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 267 ||||||| || ||||| ||||| |||||||||||||||| |||| ||| ||||||||| Sbjct: 50163 gctaaaaatcccgaaatgaaaaataccaaaataggaataagacttgatatgattagaaat 50222 Query: 268 gnccaaaaaatatcatattc 287 | |||||||||||||||||| Sbjct: 50223 gcccaaaaaatatcatattc 50242
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 176 bits (89), Expect = 3e-41 Identities = 233/280 (83%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 8 aaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagggtatag 67 |||||||| ||||| |||| |||| |||||||| || |||||||||||||| ||||| || Sbjct: 113205 aaagcttctataaatacgg-atacccccaatacatcaaaactcattgcccatgggtaaag 113263 Query: 68 aaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgtattcg 127 |||||| | ||| |||| ||||||||||||||| || |||||||||||||| || ||| | Sbjct: 113264 aaagactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggatttg 113323 Query: 128 gaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaagcttnt 187 ||||||| ||||| | | ||||| ||| |||| || ||||||||||||||||| || | Sbjct: 113324 aaattgtaaccaag-catcgcccatcggttctatcccagattcataactagaaagttttt 113382 Query: 188 ntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataa 247 | | |||| |||| || ||||||| || |||||| |||||||||||||||||||| Sbjct: 113383 ctggcccttttctaattggagctaaaattccagaaatcagaaatgccaaaataggaataa 113442 Query: 248 ggcttgctattattagaaatgnccaaaaaatatcatattc 287 | | | |||||||||||||| |||||||||||||||||| Sbjct: 113443 agatcgatattattagaaatgtccaaaaaatatcatattc 113482
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 176 bits (89), Expect = 3e-41 Identities = 217/260 (83%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 28 atacacccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaa 87 ||||||| ||||| || |||||||||||||| || || ||||| || | ||| |||| || Sbjct: 49983 atacacctaatacatcaaaactcattgcccatggataaagaaaaaccgtttcaacatcaa 50042 Query: 88 aaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccct 147 ||||||||||||| || ||||||||||||||||| |||| ||||||| ||||| | | Sbjct: 50043 aaacaacaaaaactagagcaaacatataatagcggattctaaattgtaaccaag-cgtcg 50101 Query: 148 cccatgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggg 207 || || ||| ||||||||||||||||||||||||| || | |||||| |||| ||| Sbjct: 50102 cctattggttctatacccgattcataactagaaagtttctccggtcctttgctaatcgga 50161 Query: 208 gctaaaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaat 267 ||||||| || ||||| ||||| |||||||||||||||| |||| ||| ||||||||| Sbjct: 50162 gctaaaaatcccgaaatgaaaaataccaaaataggaataagacttgatatgattagaaat 50221 Query: 268 gnccaaaaaatatcatattc 287 | |||||||||||||||||| Sbjct: 50222 gcccaaaaaatatcatattc 50241
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 174 bits (88), Expect = 1e-40 Identities = 213/255 (83%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 33 cccaatacgtcgaaactcattgcccaagggtatagaaagacggcttccacatnaaaaaca 92 |||||||| ||||||||||||||||| || || ||||| || | ||| |||| ||||||| Sbjct: 53552 cccaatacatcgaaactcattgcccatggataaagaaaaaccgtttcaacatcaaaaaca 53611 Query: 93 acaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccctcccat 152 |||||||| || |||||||||||||| || ||||| ||||||| ||||| | | ||||| Sbjct: 53612 acaaaaactagagcaaacatataataacggattcgaaattgtaaccaag-catcgcccat 53670 Query: 153 gggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggggctaa 212 ||| ||||||||||||||||||||||||| || | | | || | |||| ||||||||| Sbjct: 53671 tggttctatacccgattcataactagaaagtttttctggaccctttctaatcggggctaa 53730 Query: 213 aagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgncca 272 || || ||||| ||||||||||||||||||| |||| |||||||||||||| ||| Sbjct: 53731 aactccagaaattagaaatgccaaaataggaatagcacttgatattattagaaatgccca 53790 Query: 273 aaaaatatcatattc 287 |||||||||||||| Sbjct: 53791 gaaaatatcatattc 53805
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 174 bits (88), Expect = 1e-40 Identities = 102/108 (94%) Strand = Plus / Minus Query: 180 aagcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaat 239 |||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3819 aagcttctctggtccttcactaaccggggctaaaatgcctgaaatcgaaaatgccaaaat 3760 Query: 240 aggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3759 aggaataaggcttgctattattagaaatgtccaaaaaatatcatattc 3712
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 174 bits (88), Expect = 1e-40 Identities = 238/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | ||||||||||||||||||||||||||||||| | Sbjct: 52008 gaaaatgaaagcttctataaatacag-atacacccaatacgtcgaaactcattgcccatg 52066 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52067 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 52126 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 52127 ggattctaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 52185 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| |||||||| | || ||||| |||||||||||||| Sbjct: 52186 agtttctccggccctttgctaattggggctaacactccggaaatgaaaaatgccaaaata 52245 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| ||| |||||||||||||| |||||||| ||||||||| Sbjct: 52246 ggaacaaggattgatattattagaaatgcccaaaaaaaatcatattc 52292
>gb|U27653.1|LLU27653 Lupinus luteus NADH-plastoquinone oxidoreductase (ndhC) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 363 Score = 174 bits (88), Expect = 1e-40 Identities = 238/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 ||||||||||||||| ||||| |||| |||| |||||||| ||||||||||||||||| | Sbjct: 300 gaaaatcaaagcttctataaatacgg-atacccccaatacatcgaaactcattgcccatg 242 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 241 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 182 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||| ||||| | | ||||| ||| |||| |||||||||||||| || Sbjct: 181 ggattctaaattgtaaccaag-catcgcccattggttctattcccgattcataactcgag 123 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| | |||| |||||||||| || ||||| ||||||| ||||| Sbjct: 122 agtttctctggtcccttgctaattggggctaaaattccagaaattaaaaatgctaaaatc 63 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||| | ||||||||||||| |||||||||||||||||| Sbjct: 62 ggaataaggctcgagattattagaaatgcccaaaaaatatcatattc 16
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 174 bits (88), Expect = 1e-40 Identities = 238/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| || | |||||||||||| |||||||||||||||||| | Sbjct: 51541 gaaaatgaaagcttctataaatacag-atacacccaataggtcgaaactcattgcccatg 51599 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| | |||||||||||||| | Sbjct: 51600 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactacagcaaacatataataac 51659 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| | | ||||| ||| |||||||||| |||||| ||||| Sbjct: 51660 ggattcgaaattgtaaccaag-catcgcccattggttctatacccgactcataagtagaa 51718 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | |||| |||| ||||||||| | || ||||| |||||||||||||| Sbjct: 51719 agtttctccggccctttgctaatcggggctaacactccggaaatgaaaaatgccaaaata 51778 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 |||| |||| ||| |||||||||||||| |||||||| ||||||||| Sbjct: 51779 ggaagaaggattgatattattagaaatgcccaaaaaaaatcatattc 51825
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 168 bits (85), Expect = 6e-39 Identities = 237/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| |||||||||||| ||||||||||||||||| | Sbjct: 49045 gaaaattaaagcttctataaatacgg-atacacccaatatatcgaaactcattgcccatg 49103 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 49104 gataaagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 49163 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | ||||| ||||||| ||||| || ||||| ||| ||||||||||||| ||||||||| Sbjct: 49164 ggattcgaaattgtaaccaagcatcc-cccataggttctatacccgattcgtaactagaa 49222 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | |||||| |||| ||| ||||||| || |||| |||||| |||||| Sbjct: 49223 agtttctcgggtcctttgctaatcggtgctaaaattccggaaaatagaaatgctaaaata 49282 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| |||||||| ||||| ||| |||||||||||||| Sbjct: 49283 ggaataacacttgatattattaaaaatgcccagaaaatatcatattc 49329
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 167 bits (84), Expect = 2e-38 Identities = 237/287 (82%), Gaps = 2/287 (0%) Strand = Plus / Minus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| | |||||| ||||| |||| |||| ||||||| |||||||||| |||||| | Sbjct: 14112 gaaaatgagagcttctataaatacgg-atacccccaatatatcgaaactcagtgcccatg 14054 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| | || ||| |||| ||||||||||||||| | |||||||||||||| | Sbjct: 14053 gataaagaaaaatggtttcaacatcaaaaacaacaaaaactaaagcaaacatataataac 13994 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 ||||||| ||||||| ||||| | | ||||| ||| ||||||||||||||||||| ||| Sbjct: 13993 gtattcgaaattgtaaccaag-catcgcccattggttctatacccgattcataactcgaa 13935 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | ||| ||| |||||||||||| || ||||| ||||||||||||| Sbjct: 13934 agtttctctggccctatgctagtcggggctaaaagtccggaaattcgaaatgccaaaata 13875 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| |||||||||||||| ||| |||||||||||||| Sbjct: 13874 ggaataacacttgatattattagaaatgcccagaaaatatcatattc 13828
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 167 bits (84), Expect = 2e-38 Identities = 234/283 (82%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 5 atcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagggta 64 ||||||||||| ||||| |||| ||| |||||||| || |||||||||||||| || || Sbjct: 10994 atcaaagcttctataaatacgg-atatccccaatacatcaaaactcattgcccatggata 10936 Query: 65 tagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgtat 124 ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| || || Sbjct: 10935 aagaaaaaccgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggat 10876 Query: 125 tcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaagct 184 | | ||||||| ||||| | ||||||| ||| |||| |||||||||||||||||||| | Sbjct: 10875 ttgaaattgtaaccaag-catctcccattggttctattcccgattcataactagaaagtt 10817 Query: 185 tntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaa 244 | | | | |||| ||| |||||| |||| || ||||| | |||||||||||| |||| Sbjct: 10816 tctctggccctttgttaatcggggccaaaaagccagaaattgtaaatgccaaaatcggaa 10757 Query: 245 taaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||| | | | |||||||||||||| |||||||||||||||||| Sbjct: 10756 taaagatcgatattattagaaatgcccaaaaaatatcatattc 10714
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 161 bits (81), Expect = 1e-36 Identities = 231/280 (82%), Gaps = 2/280 (0%) Strand = Plus / Minus Query: 8 aaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaagggtatag 67 |||||||| ||||| |||| |||| |||||||| || |||||||||||||| ||||| || Sbjct: 83448 aaagcttctataaatacgg-atacccccaatacatcaaaactcattgcccatgggtaaag 83390 Query: 68 aaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagcgtattcg 127 |||||| | ||| |||| ||||||||||||||| || |||||||||||||| || ||| | Sbjct: 83389 aaagactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataacggatttg 83330 Query: 128 gaattgtacccaagncccctcccatgggtgctatacccgattcataactagaaagcttnt 187 ||||||| ||||| | | ||||| ||| |||| | ||||||||||| ||||| || | Sbjct: 83329 aaattgtaaccaag-catcgcccatcggttctatcctagattcataacttgaaagttttt 83271 Query: 188 ntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaataggaataa 247 | | |||| |||| || ||||||| || |||||| |||||||||||||||||||| Sbjct: 83270 ctggcccttttctaattggagctaaaattccagaaatcagaaatgccaaaataggaataa 83211 Query: 248 ggcttgctattattagaaatgnccaaaaaatatcatattc 287 | | | |||||||||||||| |||||||||||||||||| Sbjct: 83210 agatcgatattattagaaatgtccaaaaaatatcatattc 83171
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 151 bits (76), Expect = 1e-33 Identities = 235/287 (81%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| |||| || ||||| || |||||||||||||| | Sbjct: 52917 gaaaattaaagcttctataaagacgg-atacccctaatacatcaaaactcattgcccacg 52975 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52976 gataaagaaaaactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 53035 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||||||||| | | ||||| ||| |||| |||||||||||||| ||| Sbjct: 53036 ggattctaaattgtacccaag-catcgcccattggttctattcccgattcataactcgaa 53094 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | ||| |||| |||||||||| || ||||| ||||||||||||| Sbjct: 53095 agtttctctggctctttgctaagaggggctaaaactccagaaattagaaatgccaaaata 53154 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 53155 ggaataacacttgatattattagaaatacccagaaaatatcatattc 53201
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 151 bits (76), Expect = 1e-33 Identities = 235/287 (81%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| ||||| |||| |||| || ||||| || |||||||||||||| | Sbjct: 52891 gaaaattaaagcttctataaagacgg-atacccctaatacatcaaaactcattgcccacg 52949 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 52950 gataaagaaaaactgtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 53009 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||||||||| | | ||||| ||| |||| |||||||||||||| ||| Sbjct: 53010 ggattctaaattgtacccaag-catcgcccattggttctattcccgattcataactcgaa 53068 Query: 181 agcttntntngtccttcactaaccggggctaaaagccctgaaatcgaaaatgccaaaata 240 || || | | | ||| |||| |||||||||| || ||||| ||||||||||||| Sbjct: 53069 agtttctctggctctttgctaagaggggctaaaactccagaaattagaaatgccaaaata 53128 Query: 241 ggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 53129 ggaataacacttgatattattagaaatacccagaaaatatcatattc 53175
>gb|M12704.1|MZECPPS2G Maize chloroplast psbG gene encoding PSII-G protein, complete cds Length = 1027 Score = 115 bits (58), Expect = 8e-23 Identities = 93/101 (92%), Gaps = 3/101 (2%) Strand = Plus / Minus Query: 2 aaaatcaaagcttc-gataaaaacggcatacacccaatacgtc-gaaactcattgcccaa 59 ||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 104 aaaatgaaagcttccgataaaaacgg-atacacccaatacgtcagaaactcattgcccaa 46 Query: 60 gggtatagaaagacggcttccacatnaaaaacaacaaaaac 100 ||||| |||||||| | |||||||| ||||||||||||||| Sbjct: 45 gggtagagaaagactgtttccacatcaaaaacaacaaaaac 5
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 111 bits (56), Expect = 1e-21 Identities = 152/182 (83%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| |||||| ||| |||| || | ||| ||||||||||||||||| | Sbjct: 49126 gaaaatgaaagcttctataaaagcgg-atacccctagtacatcgaaactcattgcccacg 49184 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| |||| ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 49185 gatacagaaaaacggtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 49244 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||| ||||| || || || ||| ||||||| ||||||||||||||| Sbjct: 49245 ggattctaaattgtaaccaagcatcc-ccgatcggttctatacctgattcataactagaa 49303 Query: 181 ag 182 || Sbjct: 49304 ag 49305 Score = 58.0 bits (29), Expect = 2e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 228 aaatgccaaaataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||| ||||||| |||| |||||||| ||||| ||| |||||||||||||| Sbjct: 49351 aaatgccaaaacaggaatagcacttgatattattaaaaatgcccagaaaatatcatattc 49410
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 111 bits (56), Expect = 1e-21 Identities = 161/196 (82%), Gaps = 1/196 (0%) Strand = Plus / Minus Query: 92 aacaaaaacgagcgcaaacatataatagcgtattcggaattgtacccaagncccctccca 151 ||||||||| || |||||||||||||| || ||| | ||||||| ||||| | | |||| Sbjct: 101182 aacaaaaactagagcaaacatataataacggatttgaaattgtaaccaag-catcgccca 101124 Query: 152 tgggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggggcta 211 | ||| |||| || ||||||||||||||||| || | | | |||| |||| || |||| Sbjct: 101123 tcggttctatcccagattcataactagaaagtttttctggcccttttctaattggagcta 101064 Query: 212 aaagccctgaaatcgaaaatgccaaaataggaataaggcttgctattattagaaatgncc 271 ||| || |||||| |||||||||||||||||||| | | | |||||||||||||| || Sbjct: 101063 aaattccagaaatcagaaatgccaaaataggaataaagatcgatattattagaaatgtcc 101004 Query: 272 aaaaaatatcatattc 287 |||||||||||||||| Sbjct: 101003 aaaaaatatcatattc 100988
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 103 bits (52), Expect = 3e-19 Identities = 151/182 (82%), Gaps = 2/182 (1%) Strand = Plus / Plus Query: 1 gaaaatcaaagcttcgataaaaacggcatacacccaatacgtcgaaactcattgcccaag 60 |||||| |||||||| |||||| | | |||| |||| ||| ||||||||||||||||| | Sbjct: 50064 gaaaatgaaagcttctataaaagcag-atacccccagtacatcgaaactcattgcccacg 50122 Query: 61 ggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacatataatagc 120 | || ||||| || | ||| |||| ||||||||||||||| || |||||||||||||| | Sbjct: 50123 gatacagaaaaacagtttcaacatcaaaaacaacaaaaactagagcaaacatataataac 50182 Query: 121 gtattcggaattgtacccaagncccctcccatgggtgctatacccgattcataactagaa 180 | |||| ||||||| ||||| || || || ||| ||||||| ||||||||||||||| Sbjct: 50183 ggattctaaattgtaaccaagcatcc-ccgatcggttctatacctgattcataactagaa 50241 Query: 181 ag 182 || Sbjct: 50242 ag 50243 Score = 50.1 bits (25), Expect = 0.004 Identities = 51/60 (85%) Strand = Plus / Plus Query: 228 aaatgccaaaataggaataaggcttgctattattagaaatgnccaaaaaatatcatattc 287 ||||||||||| ||||||| |||| ||||| || ||||| ||| |||||||||||||| Sbjct: 50289 aaatgccaaaacaggaatagcacttgatattagtaaaaatgcccagaaaatatcatattc 50348
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 91.7 bits (46), Expect = 1e-15 Identities = 102/122 (83%) Strand = Plus / Minus Query: 166 gattcataactagaaagcttntntngtccttcactaaccggggctaaaagccctgaaatc 225 ||||||||||||||||| || | | | |||| |||| || ||||||| || |||||| Sbjct: 114611 gattcataactagaaagtttttctggcccttttctaattggagctaaaattccagaaatc 114552 Query: 226 gaaaatgccaaaataggaataaggcttgctattattagaaatgnccaaaaaatatcatat 285 |||||||||||||||||||| | | | |||||||||||||| |||||||||||||||| Sbjct: 114551 agaaatgccaaaataggaataaagatcgatattattagaaatgtccaaaaaatatcatat 114492 Query: 286 tc 287 || Sbjct: 114491 tc 114490
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/62 (90%) Strand = Plus / Minus Query: 153 gggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggggctaa 212 |||| |||||||||||||||||||||||||||| | | ||||||||| |||||| ||||| Sbjct: 35298991 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35298932 Query: 213 aa 214 || Sbjct: 35298931 aa 35298930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/62 (90%) Strand = Plus / Minus Query: 153 gggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggggctaa 212 |||| |||||||||||||||||||||||||||| | | ||||||||| |||||| ||||| Sbjct: 35389063 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 35389004 Query: 213 aa 214 || Sbjct: 35389003 aa 35389002
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/62 (90%) Strand = Plus / Plus Query: 153 gggtgctatacccgattcataactagaaagcttntntngtccttcactaaccggggctaa 212 |||| |||||||||||||||||||||||||||| | | ||||||||| |||||| ||||| Sbjct: 69463 gggttctatacccgattcataactagaaagcttctctggtccttcacgaaccggagctaa 69522 Query: 213 aa 214 || Sbjct: 69523 aa 69524
>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete sequence Length = 119696 Score = 63.9 bits (32), Expect = 3e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 228 aaatgccaaaataggaataaggcttgctattattagaaatgnccaaaaaatatcatatt 286 |||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| Sbjct: 37643 aaatgccaaaatagcaataacaattgatattattagaaatacccaaaaaatatcatatt 37585
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 61.9 bits (31), Expect = 1e-06 Identities = 109/134 (81%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 45 aaactcattgcccaagggtatagaaagacggcttccacatnaaaaacaacaaaaacgagc 104 |||||||| ||||| || |||| ||| || | ||| |||| ||||| ||||||||| | | Sbjct: 29693 aaactcatggcccatggatataaaaaaactgtttctacatcaaaaataacaaaaactaac 29634 Query: 105 gcaaacatataatagcgtattcggaattgtacccaagncccctcccatgggtgctatacc 164 || |||||||||||||| ||| ||||||| | ||||| | | ||||| ||| |||| || Sbjct: 29633 gcgaacatataatagcgaatttggaattgaatccaag-catcacccattggttctattcc 29575 Query: 165 cgattcataactag 178 ||||||||||||| Sbjct: 29574 tgattcataactag 29561
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 50.1 bits (25), Expect = 0.004 Identities = 106/132 (80%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 45 aaactcattgcccaagggtatagaaagacggcttccacatnaaaaacaacaaaaacgagc 104 |||||||| |||||||| || ||||| || | ||| |||| ||||| |||||||| | Sbjct: 52621 aaactcatagcccaaggataaagaaaaactgtttctacatcaaaaattacaaaaactaaa 52680 Query: 105 gcaaacatataatagcgtattcggaattgtacccaagncccctcccatgggtgctatacc 164 |||||||||||||| || ||| | ||||| | |||| | ||||||| ||| ||||||| Sbjct: 52681 gcaaacatataatatcgaatttgaaattgaatacaag-cttctcccatcggttctatacc 52739 Query: 165 cgattcataact 176 ||||||||||| Sbjct: 52740 tgattcataact 52751
>gb|U72654.1|EGU72654 Eustoma grandiflorum flavonoid 3'5'-hydroxylase (F3'5'H) mRNA, complete cds Length = 2124 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 255 tattattagaaatgnccaaaaaatatcatatt 286 |||||||||||||| |||||||| |||||||| Sbjct: 2032 tattattagaaatgtccaaaaaaaatcatatt 2001
>dbj|D14589.1| Eustoma russellianum mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 2174 Score = 50.1 bits (25), Expect = 0.004 Identities = 30/32 (93%) Strand = Plus / Minus Query: 255 tattattagaaatgnccaaaaaatatcatatt 286 |||||||||||||| |||||||| |||||||| Sbjct: 2029 tattattagaaatgtccaaaaaaaatcatatt 1998
>dbj|AB087446.1| Anthoceros formosae chloroplast ndhK, ndhC mRNA for NADH dehydrogenase 27 kDa subunit, NADH dehydrogenase ND3 subunit, partial and complete cds Length = 443 Score = 46.1 bits (23), Expect = 0.061 Identities = 107/134 (79%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 45 aaactcattgcccaagggtatagaaagacggcttccacatnaaaaacaacaaaaacgagc 104 |||||||| ||||| || || ||||| || | ||| |||| ||||| ||| ||||| | Sbjct: 185 aaactcatagcccatggatagagaaaaacagtttcaacatcaaaaataacgaaaactaaa 244 Query: 105 gcaaacatataatagcgtattcggaattgtacccaagncccctcccatgggtgctatacc 164 |||||||||||||| || ||| | ||||| | ||||| | ||||||| ||| ||||||| Sbjct: 245 gcaaacatataataacgaatttgaaattgaatccaag-catctcccataggttctatacc 303 Query: 165 cgattcataactag 178 |||||||||||| Sbjct: 304 acattcataactag 317
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 105 gcaaacatataatagcgtattcggaattgtacccaag 141 |||||||||||||| || ||| ||||||||| ||||| Sbjct: 108943 gcaaacatataataacgaatttggaattgtatccaag 108979
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 443617 tagcgtattcggaattgtaaccaag 443641 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 362504 tagcgtattcggaattgtaaccaag 362528
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 442775 tagcgtattcggaattgtaaccaag 442799 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 361677 tagcgtattcggaattgtaaccaag 361701
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 442771 tagcgtattcggaattgtaaccaag 442795 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 361673 tagcgtattcggaattgtaaccaag 361697
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 442628 tagcgtattcggaattgtaaccaag 442652 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 tagcgtattcggaattgtacccaag 141 ||||||||||||||||||| ||||| Sbjct: 361541 tagcgtattcggaattgtaaccaag 361565
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 40.1 bits (20), Expect = 3.8 Identities = 52/63 (82%) Strand = Plus / Plus Query: 53 tgcccaagggtatagaaagacggcttccacatnaaaaacaacaaaaacgagcgcaaacat 112 ||||||||| |||||||| | | ||| |||| ||| |||||||| || || |||||||| Sbjct: 59941 tgcccaaggatatagaaacaaagtttcgacatcaaatacaacaaatactagtgcaaacat 60000 Query: 113 ata 115 ||| Sbjct: 60001 ata 60003
>gb|AC008275.3| Homo sapiens BAC clone RP11-294I11 from 2, complete sequence Length = 166504 Score = 40.1 bits (20), Expect = 3.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 cttccacatnaaaaacaacaaaa 98 ||||||||| ||||||||||||| Sbjct: 112005 cttccacatgaaaaacaacaaaa 112027
>dbj|AB025608.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K14B15 Length = 83689 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 atacccgattcataactaga 179 |||||||||||||||||||| Sbjct: 60785 atacccgattcataactaga 60766
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 40.1 bits (20), Expect = 3.8 Identities = 46/55 (83%) Strand = Plus / Minus Query: 81 acatnaaaaacaacaaaaacgagcgcaaacatataatagcgtattcggaattgta 135 |||| ||||| |||||||| || |||||||||||||| || ||| | ||||||| Sbjct: 58525 acatcaaaaataacaaaaaatagagcaaacatataataacggatttgaaattgta 58471 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,391,158 Number of Sequences: 3902068 Number of extensions: 2391158 Number of successful extensions: 57741 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 57249 Number of HSP's gapped (non-prelim): 359 length of query: 287 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 265 effective length of database: 17,147,199,772 effective search space: 4544007939580 effective search space used: 4544007939580 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
