ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY374122.1| Oryza sativa (japonica cultivar-group) SCC3 mRNA,... 196 6e-47
2dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 6e-47
3gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
4gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6ref|XM_715994.1| Candida albicans SC5314 hypothetical protein (C... 48 0.035
7ref|NM_187101.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.54
8gb|BC052752.1| Danio rerio zgc:56597, mRNA (cDNA clone MGC:56597... 44 0.54
9emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Ty... 44 0.54
10ref|XM_787279.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.54
11dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRN... 44 0.54
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
13ref|NM_213407.1| Danio rerio zgc:56597 (zgc:56597), mRNA 44 0.54
14dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
15dbj|AK110137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
16ref|XM_474041.1| Oryza sativa (japonica cultivar-group), predic... 42 2.1
17gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosom... 42 2.1
18ref|XM_795552.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 42 2.1
19emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4,... 42 2.1
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
21dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
22gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana... 42 2.1
23dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
24emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in ... 42 2.1
25dbj|AK104813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
26dbj|AK064789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
27gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, co... 42 2.1
28gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, com... 40 8.5
29ref|XM_481929.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.5
30gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome... 40 8.5
31ref|XM_359517.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.5
32ref|XM_367401.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.5
33gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI ... 40 8.5
34ref|XM_742959.1| Aspergillus fumigatus Af293 SET translocation (... 40 8.5
35ref|XM_855867.1| PREDICTED: Canis familiaris similar to TIP120 p... 40 8.5
36ref|XM_531667.2| PREDICTED: Canis familiaris similar to TIP120 p... 40 8.5
37ref|XM_500868.1| Yarrowia lipolytica CLIB122, YALI0B14102g predi... 40 8.5
38ref|XM_501534.1| Yarrowia lipolytica CLIB122, YALI0C06864g predi... 40 8.5
39emb|AL359852.20| Human DNA sequence from clone RP11-299J5 on chr... 40 8.5
40emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 8.5
41emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 8.5
42ref|NM_001006725.1| Xenopus tropicalis paladin (pald), mRNA 40 8.5
43gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, com... 40 8.5
44gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell ... 40 8.5
45gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell... 40 8.5
46ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA 40 8.5
47gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, com... 40 8.5
48gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, ... 40 8.5
49gb|AC090802.6| Homo sapiens chromosome 8, clone RP11-152P17, com... 40 8.5
50gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complet... 40 8.5
51gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 8.5
52emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in ... 40 8.5
53gb|BC075467.1| Xenopus tropicalis paladin, mRNA (cDNA clone MGC:... 40 8.5
54gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown,... 40 8.5
55dbj|AK037009.1| Mus musculus adult female vagina cDNA, RIKEN ful... 40 8.5
56dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
57dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
58gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, comp... 40 8.5
59gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, compl... 40 8.5
60gb|AC008905.6|AC008905 Homo sapiens chromosome 5 clone CTD-2259I... 40 8.5
61gb|AC008865.3|AC008865 Homo sapiens chromosome 5 clone CTD-2193I... 40 8.5
62emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in ... 40 8.5
63dbj|AP000733.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.5
64dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
65dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
66gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid p... 40 8.5
67emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in ... 40 8.5
68emb|CR855717.2| Xenopus tropicalis finished cDNA, clone TGas002h03 40 8.5
69gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 ... 40 8.5
70gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 40 8.5
71gb|U65003.1|MCU65003 Mouse cytomegalovirus 1 M83 protein gene, c... 40 8.5
72gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
73emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.5
74emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.5
75emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 8.5
76gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, ... 40 8.5 
>gb|AY374122.1| Oryza sativa (japonica cultivar-group) SCC3 mRNA, complete cds
          Length = 3362

 Score =  196 bits (99), Expect = 6e-47
 Identities = 232/276 (84%), Gaps = 9/276 (3%)
 Strand = Plus / Minus

                                                                        
Query: 333  gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaaggcctaaa 392
            ||||||||| || |||||||||   ||||| ||||||||||||||||| |||| ||||||
Sbjct: 3013 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaagacctaaa 2957

                                                                        
Query: 393  cgtgttgatcaaaggctggtcaaaagcatcgtcctcgtcgtcatcatctccaccatgccc 452
            ||||||||||| |||||| ||        |||| ||||||||||  ||| ||||||||||
Sbjct: 2956 cgtgttgatcagaggctgatctg------cgtcatcgtcgtcattgtcttcaccatgccc 2903

                                                                        
Query: 453  ccgttggtcagagccactaacagactcttcatcactagatttgtttccatcaaaaaggtt 512
              | || |||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||
Sbjct: 2902 ttgctgatcagagtcactaacagactcttcatcgctagacttgtgtccatcaaaaagatt 2843

                                                                        
Query: 513  cctcacaggttcatctctaggcttcctcgggcggcccctgcgctttacaggcttttcctc 572
            |||  ||||| |||||||   |||||| || || ||||||||||||||||| ||||||||
Sbjct: 2842 ccttgcaggtacatctctgaccttccttggccgacccctgcgctttacaggtttttcctc 2783

                                                
Query: 573  cttttcttcgtggaaaacctcattccttgcatgctt 608
            |||||| || || |||||||||||||||||||||||
Sbjct: 2782 cttttcctcctgcaaaacctcattccttgcatgctt 2747
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>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score =  196 bits (99), Expect = 6e-47
 Identities = 232/276 (84%), Gaps = 9/276 (3%)
 Strand = Plus / Minus

                                                                        
Query: 333  gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaaggcctaaa 392
            ||||||||| || |||||||||   ||||| ||||||||||||||||| |||| ||||||
Sbjct: 3354 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaagacctaaa 3298

                                                                        
Query: 393  cgtgttgatcaaaggctggtcaaaagcatcgtcctcgtcgtcatcatctccaccatgccc 452
            ||||||||||| |||||| ||        |||| ||||||||||  ||| ||||||||||
Sbjct: 3297 cgtgttgatcagaggctgatctg------cgtcatcgtcgtcattgtcttcaccatgccc 3244

                                                                        
Query: 453  ccgttggtcagagccactaacagactcttcatcactagatttgtttccatcaaaaaggtt 512
              | || |||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||
Sbjct: 3243 ttgctgatcagagtcactaacagactcttcatcgctagacttgtgtccatcaaaaagatt 3184

                                                                        
Query: 513  cctcacaggttcatctctaggcttcctcgggcggcccctgcgctttacaggcttttcctc 572
            |||  ||||| ||||||||  |||||| || || ||||||||||||||||| ||||||||
Sbjct: 3183 ccttgcaggtacatctctaaccttccttggccgacccctgcgctttacaggtttttcctc 3124

                                                
Query: 573  cttttcttcgtggaaaacctcattccttgcatgctt 608
            |||||| || || |||||||||||| ||||||||||
Sbjct: 3123 cttttcctcctgcaaaacctcattctttgcatgctt 3088
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>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score =  168 bits (85), Expect = 1e-38
 Identities = 206/246 (83%), Gaps = 9/246 (3%)
 Strand = Plus / Minus

                                                                         
Query: 333   gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaaggcctaaa 392
             ||||||||| || |||||||||   ||||| ||||||||||||||||| |||| ||||||
Sbjct: 62755 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaagacctaaa 62699

                                                                         
Query: 393   cgtgttgatcaaaggctggtcaaaagcatcgtcctcgtcgtcatcatctccaccatgccc 452
             ||||||||||| |||||| ||        |||| ||||||||||  ||| ||||||||||
Sbjct: 62698 cgtgttgatcagaggctgatctg------cgtcatcgtcgtcattgtcttcaccatgccc 62645

                                                                         
Query: 453   ccgttggtcagagccactaacagactcttcatcactagatttgtttccatcaaaaaggtt 512
               | || |||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||
Sbjct: 62644 ttgctgatcagagtcactaacagactcttcatcgctagacttgtgtccatcaaaaagatt 62585

                                                                         
Query: 513   cctcacaggttcatctctaggcttcctcgggcggcccctgcgctttacaggcttttcctc 572
             |||  ||||| ||||||||  |||||| || || ||||||||||||||||| ||||||||
Sbjct: 62584 ccttgcaggtacatctctaaccttccttggccgacccctgcgctttacaggtttttcctc 62525

                   
Query: 573   cttttc 578
             ||||||
Sbjct: 62524 cttttc 62519
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>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score =  168 bits (85), Expect = 1e-38
 Identities = 206/246 (83%), Gaps = 9/246 (3%)
 Strand = Plus / Minus

                                                                         
Query: 333   gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaaggcctaaa 392
             ||||||||| || |||||||||   ||||| ||||||||||||||||| |||| ||||||
Sbjct: 61595 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaagacctaaa 61539

                                                                         
Query: 393   cgtgttgatcaaaggctggtcaaaagcatcgtcctcgtcgtcatcatctccaccatgccc 452
             ||||||||||| |||||| ||        |||| ||||||||||  ||| ||||||||||
Sbjct: 61538 cgtgttgatcagaggctgatctg------cgtcatcgtcgtcattgtcttcaccatgccc 61485

                                                                         
Query: 453   ccgttggtcagagccactaacagactcttcatcactagatttgtttccatcaaaaaggtt 512
               | || |||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||
Sbjct: 61484 ttgctgatcagagtcactaacagactcttcatcgctagacttgtgtccatcaaaaagatt 61425

                                                                         
Query: 513   cctcacaggttcatctctaggcttcctcgggcggcccctgcgctttacaggcttttcctc 572
             |||  ||||| ||||||||  |||||| || || ||||||||||||||||| ||||||||
Sbjct: 61424 ccttgcaggtacatctctaaccttccttggccgacccctgcgctttacaggtttttcctc 61365

                   
Query: 573   cttttc 578
             ||||||
Sbjct: 61364 cttttc 61359
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  168 bits (85), Expect = 1e-38
 Identities = 206/246 (83%), Gaps = 9/246 (3%)
 Strand = Plus / Minus

                                                                           
Query: 333     gcttgttccctgttgagaaacccccttcagcgatcttagcttggatgcagaaggcctaaa 392
               ||||||||| || |||||||||   ||||| ||||||||||||||||| |||| ||||||
Sbjct: 5376081 gcttgttccttgctgagaaacc---ttcagtgatcttagcttggatgcggaagacctaaa 5376025

                                                                           
Query: 393     cgtgttgatcaaaggctggtcaaaagcatcgtcctcgtcgtcatcatctccaccatgccc 452
               ||||||||||| |||||| ||        |||| ||||||||||  ||| ||||||||||
Sbjct: 5376024 cgtgttgatcagaggctgatctg------cgtcatcgtcgtcattgtcttcaccatgccc 5375971

                                                                           
Query: 453     ccgttggtcagagccactaacagactcttcatcactagatttgtttccatcaaaaaggtt 512
                 | || |||||| ||||||||||||||||||| ||||| |||| |||||||||||| ||
Sbjct: 5375970 ttgctgatcagagtcactaacagactcttcatcgctagacttgtgtccatcaaaaagatt 5375911

                                                                           
Query: 513     cctcacaggttcatctctaggcttcctcgggcggcccctgcgctttacaggcttttcctc 572
               |||  ||||| ||||||||  |||||| || || ||||||||||||||||| ||||||||
Sbjct: 5375910 ccttgcaggtacatctctaaccttccttggccgacccctgcgctttacaggtttttcctc 5375851

                     
Query: 573     cttttc 578
               ||||||
Sbjct: 5375850 cttttc 5375845
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>ref|XM_715994.1| Candida albicans SC5314 hypothetical protein (CaO19_8461), mRNA
          Length = 2088

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 421  tcgtcctcgtcgtcatcatctcca 444
            ||||||||||||||||||||||||
Sbjct: 1136 tcgtcctcgtcgtcatcatctcca 1113
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>ref|NM_187101.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 621

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 253 catcgtcctcgtcgtcatcatc 232
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>gb|BC052752.1| Danio rerio zgc:56597, mRNA (cDNA clone MGC:56597 IMAGE:5915268),
           complete cds
          Length = 2044

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 805 catcgtcctcgtcgtcatcatc 784
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>emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Type A response
           regulator 7 (rr7 gene)
          Length = 621

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 253 catcgtcctcgtcgtcatcatc 232
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>ref|XM_787279.1| PREDICTED: Strongylocentrotus purpuratus similar to Condensin subunit
            1 (Chromosome condensation-related SMC-associated protein
            1) (Chromosome-associated protein D2) (hCAP-D2) (XCAP-D2
            homolog) (LOC587559), mRNA
          Length = 1977

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 419  catcgtcctcgtcgtcatcatc 440
            ||||||||||||||||||||||
Sbjct: 1672 catcgtcctcgtcgtcatcatc 1651
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>dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRNA for typeA
           response regulator 7, complete cds
          Length = 621

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 253 catcgtcctcgtcgtcatcatc 232
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 419      catcgtcctcgtcgtcatcatc 440
                ||||||||||||||||||||||
Sbjct: 15387562 catcgtcctcgtcgtcatcatc 15387541
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>ref|NM_213407.1| Danio rerio zgc:56597 (zgc:56597), mRNA
          Length = 2044

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 805 catcgtcctcgtcgtcatcatc 784
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 419   catcgtcctcgtcgtcatcatc 440
             ||||||||||||||||||||||
Sbjct: 94561 catcgtcctcgtcgtcatcatc 94540
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>dbj|AK110137.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-D03, full
           insert sequence
          Length = 3181

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 419 catcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||||
Sbjct: 406 catcgtcctcgtcgtcatcatc 385
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>ref|XM_474041.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 419 catcgtcctcgtcgtcatcatctccacca 447
           ||||||| |||||||||||| ||||||||
Sbjct: 463 catcgtcatcgtcgtcatcacctccacca 435
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>gb|AC140286.3| Mus musculus BAC clone RP24-573E14 from chromosome 5, complete sequence
          Length = 164620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    ggaagcacatggtagaagggg 104
             |||||||||||||||||||||
Sbjct: 18492 ggaagcacatggtagaagggg 18472
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>ref|XM_795552.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC591270 (LOC591270), mRNA
          Length = 450

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 419 catcgtcctcgtcgtcatcat 439
           |||||||||||||||||||||
Sbjct: 145 catcgtcctcgtcgtcatcat 125
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>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13,
             complete sequence
          Length = 123480

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 419   catcgtcctcgtcgtcatcatctccacca 447
             ||||||| |||||||||||| ||||||||
Sbjct: 35106 catcgtcatcgtcgtcatcacctccacca 35134
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 419      catcgtcctcgtcgtcatcatctccacca 447
                ||||||| |||||||||||| ||||||||
Sbjct: 32418305 catcgtcatcgtcgtcatcacctccacca 32418333
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 421     tcgtcctcgtcgtcatcatct 441
               |||||||||||||||||||||
Sbjct: 8418690 tcgtcctcgtcgtcatcatct 8418710
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>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I,
             complete sequence
          Length = 158096

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 143   attaaacaaaaacattcaaca 163
             |||||||||||||||||||||
Sbjct: 57295 attaaacaaaaacattcaaca 57315
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>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0092H22
          Length = 165194

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 421   tcgtcctcgtcgtcatcatct 441
             |||||||||||||||||||||
Sbjct: 33391 tcgtcctcgtcgtcatcatct 33411
to top
>emb|BX294191.4| Zebrafish DNA sequence from clone DKEY-24K20 in linkage group 5, complete
              sequence
          Length = 185868

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 143    attaaacaaaaacattcaaca 163
              |||||||||||||||||||||
Sbjct: 179668 attaaacaaaaacattcaaca 179648
to top
>dbj|AK104813.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G08, full
           insert sequence
          Length = 914

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 419 catcgtcctcgtcgtcatcatctccacca 447
           ||||||| |||||||||||| ||||||||
Sbjct: 544 catcgtcatcgtcgtcatcacctccacca 516
to top
>dbj|AK064789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C05, full
           insert sequence
          Length = 929

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 419 catcgtcctcgtcgtcatcatctccacca 447
           ||||||| |||||||||||| ||||||||
Sbjct: 524 catcgtcatcgtcgtcatcacctccacca 496
to top
>gb|AC120412.12| Mus musculus chromosome 5, clone RP24-447P14, complete sequence
          Length = 149454

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    ggaagcacatggtagaagggg 104
             |||||||||||||||||||||
Sbjct: 36483 ggaagcacatggtagaagggg 36463
to top
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence
          Length = 186903

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    agcatcgtcctcgtcgtcatcatc 440
              ||||||||| ||||||||||||||
Sbjct: 114604 agcatcgtcatcgtcgtcatcatc 114627
to top
>ref|XM_481929.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||
Sbjct: 815 tcgtcctcgtcgtcatcatc 796
to top
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence
          Length = 168537

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   caggcttttcctccttttct 579
             ||||||||||||||||||||
Sbjct: 60506 caggcttttcctccttttct 60487
to top
>ref|XM_359517.1| Magnaporthe grisea 70-15 hypothetical protein (MG05260.4) partial
            mRNA
          Length = 5427

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  tcgtcctcgtcgtcatcatc 440
            ||||||||||||||||||||
Sbjct: 4265 tcgtcctcgtcgtcatcatc 4246
to top
>ref|XM_367401.1| Magnaporthe grisea 70-15 hypothetical protein (MG07326.4) partial
           mRNA
          Length = 939

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||
Sbjct: 587 tcgtcctcgtcgtcatcatc 568
to top
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila
              melanogaster library) complete sequence
          Length = 166613

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    tcgtcctcgtcgtcatcatc 440
              ||||||||||||||||||||
Sbjct: 150687 tcgtcctcgtcgtcatcatc 150668
to top
>ref|XM_742959.1| Aspergillus fumigatus Af293 SET translocation (Afu5g02910) partial
           mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||
Sbjct: 845 tcgtcctcgtcgtcatcatc 826
to top
>ref|XM_855867.1| PREDICTED: Canis familiaris similar to TIP120 protein, transcript
           variant 6 (LOC474437), mRNA
          Length = 3674

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 429 gtcgtcatcatctccaccat 448
           ||||||||||||||||||||
Sbjct: 645 gtcgtcatcatctccaccat 626
to top
>ref|XM_531667.2| PREDICTED: Canis familiaris similar to TIP120 protein, transcript
           variant 5 (LOC474437), mRNA
          Length = 5408

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 429 gtcgtcatcatctccaccat 448
           ||||||||||||||||||||
Sbjct: 924 gtcgtcatcatctccaccat 905
to top
>ref|XM_500868.1| Yarrowia lipolytica CLIB122, YALI0B14102g predicted mRNA
          Length = 2514

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 417  agcatcgtcctcgtcgtcatcatc 440
            ||||||||||||||| ||||||||
Sbjct: 1611 agcatcgtcctcgtcctcatcatc 1588
to top
>ref|XM_501534.1| Yarrowia lipolytica CLIB122, YALI0C06864g predicted mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tcgtcctcgtcgtcatcatc 440
           ||||||||||||||||||||
Sbjct: 302 tcgtcctcgtcgtcatcatc 283
to top
>emb|AL359852.20| Human DNA sequence from clone RP11-299J5 on chromosome 6, complete
             sequence
          Length = 120512

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gaagggggtgagcacctaag 117
             ||||||||||||||||||||
Sbjct: 92814 gaagggggtgagcacctaag 92833
to top
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    tcatcactagatttgtttccatca 504
              |||||||||||||| |||||||||
Sbjct: 602622 tcatcactagatttttttccatca 602599
to top
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    tcatcactagatttgtttccatca 504
              |||||||||||||| |||||||||
Sbjct: 622779 tcatcactagatttttttccatca 622756
to top
>ref|NM_001006725.1| Xenopus tropicalis paladin (pald), mRNA
          Length = 3096

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  acctcatcaactattgcttc 304
            ||||||||||||||||||||
Sbjct: 1343 acctcatcaactattgcttc 1324
to top
>gb|AC103853.2| Homo sapiens chromosome 8, clone RP11-642D21, complete sequence
          Length = 178736

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   tgcttgttccctgttgagaa 351
             ||||||||||||||||||||
Sbjct: 17739 tgcttgttccctgttgagaa 17758
to top
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179363

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   tcgtcctcgtcgtcatcatc 440
             ||||||||||||||||||||
Sbjct: 13944 tcgtcctcgtcgtcatcatc 13925
to top
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163710

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    tcgtcctcgtcgtcatcatc 440
              ||||||||||||||||||||
Sbjct: 111991 tcgtcctcgtcgtcatcatc 111972
to top
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA
          Length = 2288

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  tcgtcctcgtcgtcatcatc 440
            ||||||||||||||||||||
Sbjct: 1187 tcgtcctcgtcgtcatcatc 1168
to top
>gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, complete sequence
          Length = 157637

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 339    tccctgttgagaaacccccttcag 362
              ||||||||||||| ||||||||||
Sbjct: 140102 tccctgttgagaaccccccttcag 140125
to top
>gb|AC020807.2| Mus musculus chromosome 18 clone RG-MBAC_225G20, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaacaaaaacattcaacagc 165
             ||||||||||||||||||||
Sbjct: 32689 aaacaaaaacattcaacagc 32708
to top
>gb|AC090802.6| Homo sapiens chromosome 8, clone RP11-152P17, complete sequence
          Length = 162549

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tgcttgttccctgttgagaa 351
            ||||||||||||||||||||
Sbjct: 3772 tgcttgttccctgttgagaa 3753
to top
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence
          Length = 173967

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   ggggaagcacatggtagaag 101
            ||||||||||||||||||||
Sbjct: 4157 ggggaagcacatggtagaag 4138
to top
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 421     tcgtcctcgtcgtcatcatc 440
               ||||||||||||||||||||
Sbjct: 1581317 tcgtcctcgtcgtcatcatc 1581336
to top
>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11,
            complete sequence
          Length = 248929

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  agacaattaaacaaaaacat 157
            ||||||||||||||||||||
Sbjct: 6681 agacaattaaacaaaaacat 6700
to top
>gb|BC075467.1| Xenopus tropicalis paladin, mRNA (cDNA clone MGC:89269
            IMAGE:6976892), complete cds
          Length = 3133

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  acctcatcaactattgcttc 304
            ||||||||||||||||||||
Sbjct: 1380 acctcatcaactattgcttc 1361
to top
>gb|AC091750.1|AC091750 Mus musculus chromosome 18 clone unknown, complete sequence
          Length = 81195

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aaacaaaaacattcaacagc 165
             ||||||||||||||||||||
Sbjct: 32689 aaacaaaaacattcaacagc 32708
to top
>dbj|AK037009.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
            library, clone:9930036K22 product:similar to SIGNAL
            RECOGNITION PARTICLE 19KD [Homo sapiens], full insert
            sequence
          Length = 3298

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  aaacaaaaacattcaacagc 165
            ||||||||||||||||||||
Sbjct: 2649 aaacaaaaacattcaacagc 2630
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 421      tcgtcctcgtcgtcatcatctcca 444
                |||||||||||||| |||||||||
Sbjct: 25852398 tcgtcctcgtcgtcgtcatctcca 25852375
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 421      tcgtcctcgtcgtcatcatc 440
                ||||||||||||||||||||
Sbjct: 16487238 tcgtcctcgtcgtcatcatc 16487257
to top
>gb|AC127464.3| Ornithorhynchus anatinus clone OA_Bb-383O11, complete sequence
          Length = 161148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   aagccgtaggagcatttctc 327
             ||||||||||||||||||||
Sbjct: 94083 aagccgtaggagcatttctc 94064
to top
>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence
          Length = 179082

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 91     catggtagaagggggtgagcacct 114
              |||||||||||||||||| |||||
Sbjct: 159393 catggtagaagggggtgaccacct 159370
to top
>gb|AC008905.6|AC008905 Homo sapiens chromosome 5 clone CTD-2259I14, complete sequence
          Length = 129430

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   acaattaaacaaaaacattc 159
             ||||||||||||||||||||
Sbjct: 42431 acaattaaacaaaaacattc 42450
to top
>gb|AC008865.3|AC008865 Homo sapiens chromosome 5 clone CTD-2193I10, complete sequence
          Length = 191162

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   acaattaaacaaaaacattc 159
             ||||||||||||||||||||
Sbjct: 97118 acaattaaacaaaaacattc 97137
to top
>emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in linkage group 20,
              complete sequence
          Length = 176916

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    agatttgtttccatcaaaaa 508
              ||||||||||||||||||||
Sbjct: 116872 agatttgtttccatcaaaaa 116891
to top
>dbj|AP000733.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F28F4
          Length = 2490

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 tcactagatttgtttccatc 503
           ||||||||||||||||||||
Sbjct: 970 tcactagatttgtttccatc 989
to top
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0488B06
          Length = 154764

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   tcgtcctcgtcgtcatcatc 440
             ||||||||||||||||||||
Sbjct: 97894 tcgtcctcgtcgtcatcatc 97913
to top
>dbj|AK111837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139G05, full
           insert sequence
          Length = 1182

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 421 tcgtcctcgtcgtcatcatctcca 444
           |||||||||||||| |||||||||
Sbjct: 15  tcgtcctcgtcgtcgtcatctcca 38
to top
>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   caactattgcttcctgaagc 311
             ||||||||||||||||||||
Sbjct: 77726 caactattgcttcctgaagc 77707
to top
>emb|CR759833.23| Zebrafish DNA sequence from clone DKEYP-4F2 in linkage group 14,
             complete sequence
          Length = 157355

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   agacaattaaacaaaaacat 157
             ||||||||||||||||||||
Sbjct: 90123 agacaattaaacaaaaacat 90104
to top
>emb|CR855717.2| Xenopus tropicalis finished cDNA, clone TGas002h03
          Length = 2810

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  acctcatcaactattgcttc 304
            ||||||||||||||||||||
Sbjct: 1153 acctcatcaactattgcttc 1134
to top
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete
              sequence
          Length = 285729

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    tcgtcctcgtcgtcatcatc 440
              ||||||||||||||||||||
Sbjct: 130755 tcgtcctcgtcgtcatcatc 130774
to top
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 421    tcgtcctcgtcgtcatcatc 440
              ||||||||||||||||||||
Sbjct: 118704 tcgtcctcgtcgtcatcatc 118723
to top
>gb|U65003.1|MCU65003 Mouse cytomegalovirus 1 M83 protein gene, complete cds
          Length = 2684

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 421  tcgtcctcgtcgtcatcatc 440
            ||||||||||||||||||||
Sbjct: 1497 tcgtcctcgtcgtcatcatc 1478
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 421      tcgtcctcgtcgtcatcatctcca 444
                |||||||||||||| |||||||||
Sbjct: 25780574 tcgtcctcgtcgtcgtcatctcca 25780551
to top
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 421   tcgtcctcgtcgtcatcatctcca 444
             |||||||||||||| |||||||||
Sbjct: 73849 tcgtcctcgtcgtcgtcatctcca 73826
to top
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    tcgtcctcgtcgtcatcatc 440
              ||||||||||||||||||||
Sbjct: 920855 tcgtcctcgtcgtcatcatc 920836
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 417     agcatcgtcctcgtcgtcatcatc 440
               ||||||||||||||| ||||||||
Sbjct: 1888654 agcatcgtcctcgtcctcatcatc 1888631
to top
>gb|AC090534.10| Mus musculus Strain C57BL6/J chromosome 18 BAC, RP23-233F17, complete
              sequence
          Length = 176773

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    aaacaaaaacattcaacagc 165
              ||||||||||||||||||||
Sbjct: 104891 aaacaaaaacattcaacagc 104910


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,805,520
Number of Sequences: 3902068
Number of extensions: 5805520
Number of successful extensions: 112868
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112410
Number of HSP's gapped (non-prelim): 458
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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