ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13j15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2371 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 2312 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2311 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 2252 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2251 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 2192 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2191 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 2132 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2131 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggagctccatcca 2072 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 2012 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 1952 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 1892 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactcatcc 680 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactcatcc 1844 Score = 210 bits (106), Expect = 4e-51 Identities = 106/106 (100%) Strand = Plus / Minus Query: 1 acatttctttctaatgaaatgaaagctaaatgggcgatatgagcaactacagctcgtcct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2523 acatttctttctaatgaaatgaaagctaaatgggcgatatgagcaactacagctcgtcct 2464 Query: 61 tgtcgtactgctcgtgttccggctcctccgcctcctgcttggccga 106 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2463 tgtcgtactgctcgtgttccggctcctccgcctcctgcttggccga 2418
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 714 bits (360), Expect = 0.0 Identities = 483/524 (92%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2402 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2343 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2342 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 2283 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct: 2282 ctcgccgtctgcttcagctcctcgctctcattgtcctgggcgaccttgtcgcggagctcc 2223 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2222 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 2163 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| || Sbjct: 2162 ttgctcgagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccg 2103 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||||||||| || || |||||||||| |||||||||||||||||||||||| ||| Sbjct: 2102 tacttggaggtgacgacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgag 2043 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | | ||| | ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2042 tccacgttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactcc 1983 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1982 ttgagctccttgagcttcgagtccttgcccagcttcagtccctccttggacacgttctgg 1923 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1922 aacttcttgtcctcgtagtccatcaggtactgcatcaggtactc 1879 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 actacagctcgtccttgtcg 65 |||||||||||||||||||| Sbjct: 2503 actacagctcgtccttgtcg 2484
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 690 bits (348), Expect = 0.0 Identities = 480/524 (91%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 2172 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 2113 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 || ||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 2112 aactccttggggtcggggagggtgaacccgctctccatcagggccgtctggtacaccagc 2053 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2052 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 1993 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1992 ttgatgatggggtgcctggggttgatctccagcaccctcttgccgcgcatgtacgcctgc 1933 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 1932 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 1873 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 1872 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 1813 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | || ||| | |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1812 tccacgctctcgctctccagggccttcttccaccactccgtcagctccttgaacgactcc 1753 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1752 ttgaggtccttgagcctcgagtccttgcccagcttcaggccctccttggacacgttctgg 1693 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 |||||| |||||||||||||||| ||||| |||||||||||||| Sbjct: 1692 aacttcctgtcctcgtagtccatcaggtactgcatcaggtactc 1649
>gb|BT018144.1| Zea mays clone EL01N0555C04.c mRNA sequence Length = 1544 Score = 680 bits (343), Expect = 0.0 Identities = 477/519 (91%), Gaps = 2/519 (0%) Strand = Plus / Minus Query: 159 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 218 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1226 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1167 Query: 219 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 278 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1166 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1107 Query: 279 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 338 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1106 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1047 Query: 339 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 398 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1046 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 987 Query: 399 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 458 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 986 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 927 Query: 459 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtcaatg 518 ||||||||||| || |||||||||| |||||||||||||||||||||||| ||||| | | Sbjct: 926 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtccacg 867 Query: 519 ccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactccttgagg 578 ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 866 ttctcgctctccagggccttcttccaccagtcagtcagctccttgaacgactccttgagc 807 Query: 579 tccttgagc-ttcgagtccttgccgagcttcaggccctccttggacacgttctggaactt 637 ||| ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 806 tcc-tgagctttcgagtccttgcccagcttcagtccctccttggacacgttctggaactt 748 Query: 638 cttgtcctcgtagtccatgaggtattgcatcaggtactc 676 |||||||||||||||||| ||||| |||||||||||||| Sbjct: 747 cttgtcctcgtagtccatcaggtactgcatcaggtactc 709
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 650 bits (328), Expect = 0.0 Identities = 475/524 (90%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 2416 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 2357 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2356 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 2297 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 2296 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2237 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2236 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2177 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2176 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2117 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 2116 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2057 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | || ||| ||||| || |||||||||||||||||||||||||||||||| |||||| Sbjct: 2056 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1997 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||||||||||||||| |||||||||||||| || || ||||||||||| ||||||||| Sbjct: 1996 ttgaggtccttgagcttagagtccttgccgagtttgagaccctccttggagacgttctgg 1937 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1936 aacttcttgtcctcgtagtccatgaggtattgcatcaagtactc 1893
>dbj|AK062023.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G02, full insert sequence Length = 2026 Score = 650 bits (328), Expect = 0.0 Identities = 475/524 (90%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1738 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1679 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1678 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1619 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1618 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1559 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1558 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1499 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 1498 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 1439 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 1438 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1379 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | || ||| ||||| || |||||||||||||||||||||||||||||||| |||||| Sbjct: 1378 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1319 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||||||||||||||| |||||||||||||| || || ||||||||||| ||||||||| Sbjct: 1318 ttgaggtccttgagcttagagtccttgccgagtttgagaccctccttggagacgttctgg 1259 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1258 aacttcttgtcctcgtagtccatgaggtattgcatcaagtactc 1215
>dbj|AK119605.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F01, full insert sequence Length = 1944 Score = 642 bits (324), Expect = 0.0 Identities = 474/524 (90%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 1656 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 1597 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 1596 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 1537 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1536 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 1477 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1476 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 1417 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||| || ||||| |||||||||| |||||||||||||||| |||||| ||||| || Sbjct: 1416 ttgctggcatccgagagggtctgtgactgcatgatcttctccgtgttggcgctccacccg 1357 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 1356 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 1297 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | || ||| ||||| || |||||||||||||||||||||||||||||||| |||||| Sbjct: 1296 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1237 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||||||||||||||| |||||||||||||| || || ||||||||||| ||||||||| Sbjct: 1236 ttgaggtccttgagcttagagtccttgccgagtttgagaccctccttggagacgttctgg 1177 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1176 aacttcttgtcctcgtagtccatgaggtattgcatcaagtactc 1133
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 642 bits (324), Expect = 0.0 Identities = 474/524 (90%) Strand = Plus / Minus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| | || Sbjct: 2410 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctgaaggcg 2351 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 2350 aagtccttgggatcagggaggttgaagccgctctccatgagggccgtctggtacaccagc 2291 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 2290 ttcgccgtctgcttcaagctctcgctctcgctgtcctgggcgaccttgtcacggagttcc 2231 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||| Sbjct: 2230 ttgatgatggggtgcctggggttgatctcgagtaccctcttgccgcgcatgtacgcctgc 2171 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||| || ||||| |||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 2170 ttgctggcatccgagagggtctgtgactgcatgatcttctccatgttggcgctccacccg 2111 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||| || |||||||| |||||||||| | ||||||||||||||||||||| ||| Sbjct: 2110 tacttggatgtcaccaccacgcagggggtgtcgctcagccggttgctgatcttcaccgag 2051 Query: 513 tcaatgccctccgtgtccagggccttcttccaccagtcggtcagctccttgaacgactcc 572 || | || ||| ||||| || |||||||||||||||||||||||||||||||| |||||| Sbjct: 2050 tccacgctctcggtgtcaagagccttcttccaccagtcggtcagctccttgaaggactcc 1991 Query: 573 ttgaggtccttgagcttcgagtccttgccgagcttcaggccctccttggacacgttctgg 632 ||||||||||||||||| |||||||||||||| || || ||||||||||| ||||||||| Sbjct: 1990 ttgaggtccttgagcttagagtccttgccgagtttgagaccctccttggagacgttctgg 1931 Query: 633 aacttcttgtcctcgtagtccatgaggtattgcatcaggtactc 676 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1930 aacttcttgtcctcgtagtccatgaggtattgcatcaagtactc 1887
>gb|BT018707.1| Zea mays clone EL01N0516A06.d mRNA sequence Length = 1546 Score = 492 bits (248), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Minus Query: 159 gcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgcaaagtcc 218 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||| || ||| Sbjct: 1240 gcgtcggggctcaggtccaggcccttctgcaccgacttgtagatgctggacgcgaactcc 1181 Query: 219 ttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagcctcgcc 278 |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1180 ttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagcctcgcc 1121 Query: 279 gtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctccttgatg 338 || |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1120 gtgtgcttcagctcctcgctctcgttgtcctgggcgaccttgtcgcggagctccttgatg 1061 Query: 339 atggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctc 398 |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1060 atggggtgcctggggttgatctcgagcaccctcttgccgcgcatgtacgcctgcttgctc 1001 Query: 399 gcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccatacttg 458 | ||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1000 gagtccgacagggtctgcgcctgcatgatcttctccatgttggcgctccacccgtacttg 941 Query: 459 gaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagagtc 514 ||||||||||| || |||||||||| |||||||||||||||||||||||| ||||| Sbjct: 940 gaggtgaccacgacgcagggggtgtcgtgcagccggttgctgatcttcaccgagtc 885 Score = 248 bits (125), Expect = 2e-62 Identities = 143/149 (95%) Strand = Plus / Minus Query: 528 tccagggccttcttccaccagtcggtcagctccttgaacgactccttgaggtccttgagc 587 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 871 tccagggccttcttccaccagtcagtcagctccttgaacgactccttgagctccttgagc 812 Query: 588 ttcgagtccttgccgagcttcaggccctccttggacacgttctggaacttcttgtcctcg 647 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 811 ttcgagtccttgcccagcttcagtccctccttggacacgttctggaacttcttgtcctcg 752 Query: 648 tagtccatgaggtattgcatcaggtactc 676 |||||||| ||||| |||||||||||||| Sbjct: 751 tagtccatcaggtactgcatcaggtactc 723
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 486 bits (245), Expect = e-134 Identities = 344/377 (91%) Strand = Plus / Plus Query: 300 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 359 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 9854 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 9913 Query: 360 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 419 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 9914 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 9973 Query: 420 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 479 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 9974 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 10033 Query: 480 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 539 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 10034 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 10093 Query: 540 ttccaccagtcggtcagctccttgaacgactccttgaggtccttgagcttcgagtccttg 599 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 10094 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 10153 Query: 600 ccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgagg 659 ||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10154 ccgagtttgagaccctccttggagacgttctggaacttcttgtcctcgtagtccatgagg 10213 Query: 660 tattgcatcaggtactc 676 |||||||||| |||||| Sbjct: 10214 tattgcatcaagtactc 10230 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 9601 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 9660 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 9661 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 9720 Query: 273 ctcgccgtctgcttcaggccctcgct 298 ||||||||||||||| || |||||| Sbjct: 9721 ttcgccgtctgcttcaagctctcgct 9746
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 486 bits (245), Expect = e-134 Identities = 344/377 (91%) Strand = Plus / Plus Query: 300 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 359 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 29929148 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 29929207 Query: 360 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 419 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 29929208 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 29929267 Query: 420 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 479 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 29929268 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 29929327 Query: 480 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 539 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 29929328 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 29929387 Query: 540 ttccaccagtcggtcagctccttgaacgactccttgaggtccttgagcttcgagtccttg 599 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 29929388 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 29929447 Query: 600 ccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgagg 659 ||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 29929448 ccgagtttgagaccctccttggagacgttctggaacttcttgtcctcgtagtccatgagg 29929507 Query: 660 tattgcatcaggtactc 676 |||||||||| |||||| Sbjct: 29929508 tattgcatcaagtactc 29929524 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 29928895 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 29928954 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 29928955 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 29929014 Query: 273 ctcgccgtctgcttcaggccctcgct 298 ||||||||||||||| || |||||| Sbjct: 29929015 ttcgccgtctgcttcaagctctcgct 29929040 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 tccggctcctccgcctcctgcttggccg 105 ||||||||||||||||||| ||| |||| Sbjct: 15914667 tccggctcctccgcctcctccttcgccg 15914694
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 486 bits (245), Expect = e-134 Identities = 344/377 (91%) Strand = Plus / Plus Query: 300 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 359 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 5296 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 5355 Query: 360 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 419 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 5356 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 5415 Query: 420 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 479 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 5416 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 5475 Query: 480 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 539 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 5476 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 5535 Query: 540 ttccaccagtcggtcagctccttgaacgactccttgaggtccttgagcttcgagtccttg 599 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 5536 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 5595 Query: 600 ccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgagg 659 ||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5596 ccgagtttgagaccctccttggagacgttctggaacttcttgtcctcgtagtccatgagg 5655 Query: 660 tattgcatcaggtactc 676 |||||||||| |||||| Sbjct: 5656 tattgcatcaagtactc 5672 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 5043 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 5102 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 5103 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 5162 Query: 273 ctcgccgtctgcttcaggccctcgct 298 ||||||||||||||| || |||||| Sbjct: 5163 ttcgccgtctgcttcaagctctcgct 5188
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 486 bits (245), Expect = e-134 Identities = 344/377 (91%) Strand = Plus / Plus Query: 300 tcgctgtcctgggcgaccttgtcgcggagctccttgatgatggggtgccgggggttgatc 359 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 124661 tcgctgtcctgggcgaccttgtcacggagttccttgatgatggggtgcctggggttgatc 124720 Query: 360 tccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagggtctgtgcc 419 || || |||||||||||||||||||||||||||||||| || ||||| |||||||||| | Sbjct: 124721 tcgagtaccctcttgccgcgcatgtacgcctgcttgctggcatccgagagggtctgtgac 124780 Query: 420 tgcatgatcttctccatgttggaactccatccatacttggaggtgaccaccacacagggg 479 |||||||||||||||||||||| ||||| || |||||||| || |||||||| |||||| Sbjct: 124781 tgcatgatcttctccatgttggcgctccacccgtacttggatgtcaccaccacgcagggg 124840 Query: 480 gtgttgtgcagccggttgctgatcttcacagagtcaatgccctccgtgtccagggccttc 539 |||| | ||||||||||||||||||||| ||||| | || ||| ||||| || |||||| Sbjct: 124841 gtgtcgctcagccggttgctgatcttcaccgagtccacgctctcggtgtcaagagccttc 124900 Query: 540 ttccaccagtcggtcagctccttgaacgactccttgaggtccttgagcttcgagtccttg 599 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 124901 ttccaccagtcggtcagctccttgaaggactccttgaggtccttgagcttagagtccttg 124960 Query: 600 ccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgagg 659 ||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 124961 ccgagtttgagaccctccttggagacgttctggaacttcttgtcctcgtagtccatgagg 125020 Query: 660 tattgcatcaggtactc 676 |||||||||| |||||| Sbjct: 125021 tattgcatcaagtactc 125037 Score = 170 bits (86), Expect = 4e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 124408 acggccgcgtcggggctcaggtcaaggctcttctgcaccgacctgtagatgctggaggcg 124467 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 ||||||||||| || || |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 124468 aagtccttgggatcaggaaggttgaagccgctctccatgagggccgtctggtacaccagc 124527 Query: 273 ctcgccgtctgcttcaggccctcgct 298 ||||||||||||||| || |||||| Sbjct: 124528 ttcgccgtctgcttcaagctctcgct 124553
>gb|BT016887.1| Zea mays clone Contig720 mRNA sequence Length = 719 Score = 472 bits (238), Expect = e-130 Identities = 331/362 (91%) Strand = Plus / Plus Query: 153 acggcagcgtcggggctcaggtccaggctcttctgcaccgaccggtagatgctcgacgca 212 ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 339 acggccgcgtcggggctcaggtccaggctcttgtgcaccgacttgtagatgctggacgcg 398 Query: 213 aagtccttggggtccggcaggttgaacccgctctccatcagcgccgtctggtacaccagc 272 || ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 399 aactccttggggtcggggaggttgaacccgctctccatcagggccgtctggtacaccagc 458 Query: 273 ctcgccgtctgcttcaggccctcgctgtcgctgtcctgggcgaccttgtcgcggagctcc 332 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 459 ctcgccgtctgcttcagctcctcgctctcgctgtcctgggcgaccttgtcgcggagctcc 518 Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 519 ttgatgatggggtgcctggggttgatctccaccaccctcttgccgcgcatgtacgcctgc 578 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 ||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 579 ttgctcgagtccgacagcgtctgcgcctgcatgatcttctccatgttggcgctccacccg 638 Query: 453 tacttggaggtgaccaccacacagggggtgttgtgcagccggttgctgatcttcacagag 512 |||||||||||||| || || ||||||||| |||||||||| |||||| |||||| ||| Sbjct: 639 tacttggaggtgacgacgacggagggggtgtcgtgcagccggctgctgaccttcaccgag 698 Query: 513 tc 514 || Sbjct: 699 tc 700
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 121 bits (61), Expect = 3e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 555 agctccttgaacgactccttgaggtccttgagcttcgagtccttgccgagcttcaggccc 614 ||||||||||| ||||||||||| ||||||| ||| || ||||| |||| || || ||| Sbjct: 1931 agctccttgaaggactccttgagatccttgatctttgactccttcccgattttgagaccc 1872 Query: 615 tccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattgcatcaggtac 674 |||||||||||||||||||| ||||||||||| |||||||| | ||||||||||| ||| Sbjct: 1871 tccttggacacgttctggaatttcttgtcctcatagtccatcaagtattgcatcaaatac 1812 Query: 675 tcatc 679 ||||| Sbjct: 1811 tcatc 1807 Score = 95.6 bits (48), Expect = 2e-16 Identities = 135/164 (82%) Strand = Plus / Minus Query: 351 gggttgatctccaggaccctcttgccgcgcatgtacgcctgcttgctcgcgtccgacagg 410 ||||| ||||| || |||||||| ||||||||||| ||||||||||| || || || || Sbjct: 2135 gggttaatctcgagcaccctcttcccgcgcatgtatgcctgcttgctggcatcggaaaga 2076 Query: 411 gtctgtgcctgcatgatcttctccatgttggaactccatccatacttggaggtgaccacc 470 ||||| | |||||| |||||||||||||| | |||||| ||||| || || ||||| || Sbjct: 2075 gtctgagactgcataatcttctccatgtttgcactccaaccatatttcgatgtgacaaca 2016 Query: 471 acacagggggtgttgtgcagccggttgctgatcttcacagagtc 514 || || || ||||| | || ||||||||| |||||||| ||||| Sbjct: 2015 acgcaaggagtgttatccaaccggttgctaatcttcacggagtc 1972
>gb|L14594.1|CTRHSP90A Catharanthus roseus heat shock protein 90 mRNA, complete cds Length = 2670 Score = 113 bits (57), Expect = 8e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 539 cttccaccagtcggtcagctccttgaacgactccttgaggtccttgagcttcgagtcctt 598 ||||||||| | ||| | ||||||||| ||||||||||| |||||| ||||| ||||| Sbjct: 1964 cttccaccacttggttaactccttgaatgactccttgagttccttgtctttcgaatcctt 1905 Query: 599 gccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgag 658 |||| |||||||||||||| ||||| || ||||| ||||| ||||| |||||||| || Sbjct: 1904 tccgattttcaggccctccttagacacattttggaatttcttatcctcatagtccattag 1845 Query: 659 gtattgcatcaggtactcatc 679 |||||||||||||||||||| Sbjct: 1844 atattgcatcaggtactcatc 1824
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 453 tacttgga 460 ||||||| Sbjct: 2087 aacttgga 2080 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1935 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 1876 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 1875 catcaagtattcatc 1861
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2207 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2148 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2147 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2088 Query: 453 tacttgga 460 ||||||| Sbjct: 2087 aacttgga 2080 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1935 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 1876 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 1875 catcaagtattcatc 1861
>emb|AL109619.1|ATT19F6 Arabidopsis thaliana DNA chromosome 4, BAC clone T19F6, partial sequence (ESSA project) Length = 77567 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 76717 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 76776 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 76777 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 76836 Query: 453 tacttgga 460 ||||||| Sbjct: 76837 aacttgga 76844 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 76989 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 77048 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 77049 catcaagtattcatc 77063
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 3355 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 3414 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 3415 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 3474 Query: 453 tacttgga 460 ||||||| Sbjct: 3475 aacttgga 3482 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 3627 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 3686 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 3687 catcaagtattcatc 3701
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 20012 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 20071 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 20072 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 20131 Query: 453 tacttgga 460 ||||||| Sbjct: 20132 aacttgga 20139 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 20284 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 20343 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 20344 catcaagtattcatc 20358
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2201 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2142 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2141 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2082 Query: 453 tacttgga 460 ||||||| Sbjct: 2081 aacttgga 2074 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1929 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 1870 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 1869 catcaagtattcatc 1855
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2153 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2094 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2093 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2034 Query: 453 tacttgga 460 ||||||| Sbjct: 2033 aacttgga 2026 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1881 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 1822 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 1821 catcaagtattcatc 1807
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2193 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 2134 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 2133 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 2074 Query: 453 tacttgga 460 ||||||| Sbjct: 2073 aacttgga 2066 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 1921 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 1862 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 1861 catcaagtattcatc 1847
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 851 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 792 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 791 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 732 Query: 453 tacttgga 460 ||||||| Sbjct: 731 aacttgga 724 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 579 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 520 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 519 catcaagtattcatc 505
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Minus Query: 333 ttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatgtacgcctgc 392 |||||||| ||||| || ||||||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 5136 ttgatgatagggtgtcgtgggttgatctcgaggactctctttccgcgcatgtaagcttgc 5077 Query: 393 ttgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatcca 452 || | || ||||| || || || | |||||||||| ||||||| || | |||||||||| Sbjct: 5076 ttattagcatccgagagagtttgggactgcatgatcctctccatattagcactccatcca 5017 Query: 453 tacttgga 460 ||||||| Sbjct: 5016 aacttgga 5009 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 4864 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 4805 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 4804 catcaagtattcatc 4790
>gb|AY072394.1| Arabidopsis thaliana HSP90-like protein (At4g24190) mRNA, complete cds Length = 897 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgaggtattg 664 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 894 cttcagtccttccttggacacattctggaactttttgtcttcgtaatccatcaggtattg 835 Query: 665 catcaggtactcatc 679 ||||| ||| ||||| Sbjct: 834 catcaagtattcatc 820
>gb|AF239931.1|AF239931 Euphorbia esula putative heat-shock protein 90 mRNA, partial cds Length = 1207 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 600 ccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtccatgagg 659 ||||| || ||||||||||||||||| |||||||| |||||||| || || ||||| | Sbjct: 397 ccgagttttaggccctccttggacacattctggaatttcttgtcttcataatccatcaaa 338 Query: 660 tattgcatcaggtactcatc 679 |||||||||||||| ||||| Sbjct: 337 tattgcatcaggtattcatc 318
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 594 tccttgccgagcttcaggccctccttggacacgttctggaacttcttgtcctcgtagtcc 653 ||||| ||||| |||| |||||||||||||| || ||||||||||| || || || ||| Sbjct: 79852 tccttcccgagtttcaaaccctccttggacacattttggaacttcttatcttcataatcc 79793 Query: 654 atgaggtattgcatcaggtactcatc 679 || ||||||||||||| ||| ||||| Sbjct: 79792 atcaggtattgcatcaagtattcatc 79767 Score = 61.9 bits (31), Expect = 3e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 324 cggagctccttgatgatggggtgccgggggttgatctccaggaccctcttgccgcgcatg 383 ||||| ||||||||||| ||||| | || |||||||| || |||||||||||||||||| Sbjct: 80122 cggagttccttgatgatagggtgtctaggattgatctcaagaaccctcttgccgcgcatg 80063 Query: 384 tacgcctgctt 394 || || ||||| Sbjct: 80062 tatgcttgctt 80052
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 612 ccctccttggacacgttctggaacttcttg 641 |||||||||| ||||||||||||||||||| Sbjct: 63007 ccctccttggccacgttctggaacttcttg 62978
>ref|NM_143344.2| Drosophila melanogaster Glycoprotein 93 CG5520-RA (Gp93), mRNA Length = 2903 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 612 ccctccttggacacgttctggaacttcttg 641 |||||||||| ||||||||||||||||||| Sbjct: 1979 ccctccttggccacgttctggaacttcttg 1950
>gb|AY075384.1| Drosophila melanogaster LD23641 full length cDNA Length = 2839 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 612 ccctccttggacacgttctggaacttcttg 641 |||||||||| ||||||||||||||||||| Sbjct: 1892 ccctccttggccacgttctggaacttcttg 1863
>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the complete sequence Length = 206189 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 612 ccctccttggacacgttctggaacttcttg 641 |||||||||| ||||||||||||||||||| Sbjct: 58783 ccctccttggccacgttctggaacttcttg 58754
>gb|DQ084238.1| Leishmania donovani chagasi clone LCPE01EX020024H11.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 564 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctcca 363 |||||||||||||||||||| | |||||||| ||||| Sbjct: 136 agctccttgatgatggggtgtctggggttgagctcca 100
>gb|DQ084237.1| Leishmania donovani chagasi clone LCPE01EX020050A04.g 83 kDa heat shock protein (hsp83) mRNA, partial cds Length = 597 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctcca 363 |||||||||||||||||||| | |||||||| ||||| Sbjct: 513 agctccttgatgatggggtgtctggggttgagctcca 477
>emb|X87770.2|LIHSP83GN Leishmania infantum hsp83-1 gene for heat shock protein 83-1 and hsp83-2 gene for heat shock protein 83-2 Length = 3744 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctcca 363 |||||||||||||||||||| | |||||||| ||||| Sbjct: 1914 agctccttgatgatggggtgtctggggttgagctcca 1878
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 68 ctgctcgtgttccggctcctccgcctcctgct 99 |||||| ||||||||||||||| ||||||||| Sbjct: 178788 ctgctcctgttccggctcctcctcctcctgct 178819
>gb|AY103538.1| Zea mays PCO150589 mRNA sequence Length = 2534 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Minus Query: 394 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttgg 441 |||||| |||| ||||| |||||||| ||||||| |||||||||||| Sbjct: 1968 tgctcgagtccctcagggcctgtgccttcatgatcctctccatgttgg 1921
>emb|CT573078.1| Medicago truncatula chromosome 5 clone mte1-4f8, COMPLETE SEQUENCE Length = 165916 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 413 ctgtgcctgcatgatcttctccatgttggaactccatccatact 456 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 33488 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 33445 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 413 ctgtgcctgcatgatcttctccatgttggaactccatccatact 456 |||||||| ||||||| |||||||||||| | |||| ||||||| Sbjct: 22847 ctgtgccttcatgatcctctccatgttggcagtccaaccatact 22804
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 407 cagggtctgtgcctgcatgatcttctccatgttgg 441 ||||| |||||||| ||||||| |||||||||||| Sbjct: 1909 cagggcctgtgccttcatgatcctctccatgttgg 1875
>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds Length = 2397 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 394 tgctcgcgtccgacagggtctgtgcctgcatgatcttctccatgttggaactccatccat 453 |||||| |||| ||||| ||| |||| ||||||| |||||||||||| | |||| |||| Sbjct: 1898 tgctcgtgtccctcagggcctgggccttcatgatcctctccatgttggcagtccagccat 1839 Query: 454 act 456 ||| Sbjct: 1838 act 1836
>gb|AF384808.1| Cryptococcus neoformans var. grubii heat-shock protein 90 gene, partial cds Length = 2391 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 326 gagctccttgatgatggggtgccgggggttgatctcca 363 ||||||||||||||||||||| |||||||| ||||| Sbjct: 2154 gagctccttgatgatggggtgagaggggttgagctcca 2117
>gb|AY118578.1| Drosophila melanogaster LD43460 full insert cDNA Length = 1210 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctccag 364 |||| |||||||||||||||| |||||||||||||| Sbjct: 910 agcttcttgatgatggggtgctttgggttgatctccag 873
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 atttctttctaatgaaatgaaa 24 |||||||||||||||||||||| Sbjct: 1261169 atttctttctaatgaaatgaaa 1261148
>ref|NM_058091.3| Drosophila melanogaster Trap1 CG3152-RA (Trap1), mRNA Length = 2478 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctccag 364 |||| |||||||||||||||| |||||||||||||| Sbjct: 2197 agcttcttgatgatggggtgctttgggttgatctccag 2160
>gb|AY122624.1| Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90) gene, partial cds Length = 1873 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctccag 364 |||||||||||||||| ||| | |||||||||||||| Sbjct: 1740 agctccttgatgatggcgtggctcgggttgatctccag 1703
>gb|AF115775.2|AF115775 Drosophila melanogaster Hsp90-related protein TRAP1 mRNA, complete cds Length = 2162 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctccag 364 |||| |||||||||||||||| |||||||||||||| Sbjct: 2000 agcttcttgatgatggggtgctttgggttgatctccag 1963
>gb|BT001316.1| Drosophila melanogaster AT15050 full insert cDNA Length = 2475 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctccag 364 |||| |||||||||||||||| |||||||||||||| Sbjct: 2193 agcttcttgatgatggggtgctttgggttgatctccag 2156
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ctcctccgcctcctgcttggcc 104 |||||||||||||||||||||| Sbjct: 2035901 ctcctccgcctcctgcttggcc 2035922
>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence Length = 2179 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 413 ctgtgcctgcatgatcttctccatgttgg 441 |||||||| ||||||| |||||||||||| Sbjct: 1704 ctgtgccttcatgatcctctccatgttgg 1676 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 cgagcttcaggccctccttgg 621 ||||||||||||||||||||| Sbjct: 1507 cgagcttcaggccctccttgg 1487
>gb|AC153140.5| Mus musculus BAC clone RP23-340P19 from chromosome 12, complete sequence Length = 241834 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 tggaactccatccatacttgg 459 ||||||||||||||||||||| Sbjct: 152955 tggaactccatccatacttgg 152935
>gb|AY288511.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 633 aacttcttgtcctcgtagtcc 653 ||||||||||||||||||||| Sbjct: 1467 aacttcttgtcctcgtagtcc 1447
>gb|AY288510.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 633 aacttcttgtcctcgtagtcc 653 ||||||||||||||||||||| Sbjct: 1467 aacttcttgtcctcgtagtcc 1447
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ctaatgaaatgaaagctaaat 31 ||||||||||||||||||||| Sbjct: 1421262 ctaatgaaatgaaagctaaat 1421242
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 agtccttggggtccggcaggt 234 ||||||||||||||||||||| Sbjct: 266763 agtccttggggtccggcaggt 266743
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ttctaatgaaatgaaagctaa 29 ||||||||||||||||||||| Sbjct: 112594 ttctaatgaaatgaaagctaa 112614
>gb|AY187547.1| Strongylocentrotus purpuratus heat shock protein gp96 mRNA, complete cds Length = 2497 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttg 641 |||||| || ||||||| |||||||||||||||||| Sbjct: 1828 cttcagtccttccttggcaacgttctggaacttcttg 1792
>ref|NR_002839.1| Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome 6 Length = 1351 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ggctcctccgcctcctgcttg 101 ||||||||||||||||||||| Sbjct: 1084 ggctcctccgcctcctgcttg 1064
>ref|NM_214643.1| Strongylocentrotus purpuratus heat shock protein gp96 (Gp96), mRNA Length = 2497 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 605 cttcaggccctccttggacacgttctggaacttcttg 641 |||||| || ||||||| |||||||||||||||||| Sbjct: 1828 cttcagtccttccttggcaacgttctggaacttcttg 1792
>ref|XM_318677.2| Anopheles gambiae str. PEST ENSANGP00000004639 (ENSANGG00000003636), partial mRNA Length = 3264 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cctccgcctcctgcttggccg 105 ||||||||||||||||||||| Sbjct: 1432 cctccgcctcctgcttggccg 1412
>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence Length = 1267 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 413 ctgtgcctgcatgatcttctccatgttgg 441 |||||||| ||||||| |||||||||||| Sbjct: 687 ctgtgccttcatgatcctctccatgttgg 659
>gb|AF022079.1|AF022079 Mus musculus antisense Dlx-6 mRNA, partial sequence Length = 1351 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ggctcctccgcctcctgcttg 101 ||||||||||||||||||||| Sbjct: 1084 ggctcctccgcctcctgcttg 1064
>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence Length = 211740 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ggctcctccgcctcctgcttg 101 ||||||||||||||||||||| Sbjct: 107299 ggctcctccgcctcctgcttg 107319
>gb|M60499.1|HUMPROFILC Human profilaggrin mRNA, 5' end Length = 1496 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 ccctcgctgtcgctgtcctgg 311 ||||||||||||||||||||| Sbjct: 349 ccctcgctgtcgctgtcctgg 329
>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence Length = 199499 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 tggaactccatccatacttgg 459 ||||||||||||||||||||| Sbjct: 49214 tggaactccatccatacttgg 49234
>gb|M73492.1|LEIHSP90 Leishmania donovani heat shock protein 90 mRNA, 3' end Length = 2197 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 331 ccttgatgatggggtgccgggggttgatctcca 363 |||||||||||||||| | |||||||| ||||| Sbjct: 1105 ccttgatgatggggtgtctggggttgagctcca 1073
>gb|M92926.1|LEIHSP01 Leishmania amazonensis heat shock protein 83 gene, complete cds Length = 2106 Score = 42.1 bits (21), Expect = 2.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtgccgggggttgatctcca 363 |||||||||||||||||||| |||||||| ||||| Sbjct: 1853 agctccttgatgatggggtgtttggggttgagctcca 1817
>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence Length = 172747 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 119070 cctccgtgtccagggccttc 119089
>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence Length = 173643 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 154392 cctccgtgtccagggccttc 154411
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ggaggtgaccaccacacagg 477 |||||||||||||||||||| Sbjct: 1304504 ggaggtgaccaccacacagg 1304485
>ref|XM_598073.2| PREDICTED: Bos taurus similar to SLIT-ROBO Rho GTPase activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC519843), partial mRNA Length = 2576 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 cctcgccgtctgcttcaggccctcgctg 299 ||||||| |||||||| ||||||||||| Sbjct: 1086 cctcgccatctgcttcgggccctcgctg 1113
>ref|NM_175934.2| Mus musculus protein phosphatase 1, regulatory subunit 10 (Ppp1r10), mRNA Length = 4203 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 2910 cctccgtgtccagggccttc 2891
>gb|AC123605.8| Mus musculus chromosome 5, clone RP24-176O2, complete sequence Length = 211657 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 60512 cctccgtgtccagggccttc 60531
>gb|BC029765.1| Mus musculus protein phosphatase 1, regulatory subunit 10, mRNA (cDNA clone IMAGE:4950618), partial cds Length = 2917 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 1620 cctccgtgtccagggccttc 1601
>gb|BC052059.1| Mus musculus protein phosphatase 1, regulatory subunit 10, mRNA (cDNA clone MGC:62449 IMAGE:5702171), complete cds Length = 4240 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 2949 cctccgtgtccagggccttc 2930
>ref|XR_003657.1| PREDICTED: Mus musculus similar to vacuole Membrane Protein 1 (LOC633663), mRNA Length = 1375 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 698 cctccgtgtccagggccttc 679
>gb|BC024994.1| Mus musculus protein phosphatase 1, regulatory subunit 10, mRNA (cDNA clone IMAGE:5012018), with apparent retained intron Length = 1596 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 306 cctccgtgtccagggccttc 287
>ref|XM_776422.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome P450, family 2, subfamily U, polypeptide 1 (LOC576077), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 ctccttggacacgttctgga 633 |||||||||||||||||||| Sbjct: 693 ctccttggacacgttctgga 712
>emb|AJ504718.1|MMU504718 Mus musculus mRNA for protein phosphatase I (CAT53 gene) Length = 4203 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 2910 cctccgtgtccagggccttc 2891
>emb|AL713921.15| Mouse DNA sequence from clone RP23-475A8 on chromosome 11 Contains a novel gene and a CpG island, complete sequence Length = 214065 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ctgcttcaggccctcgctgt 300 |||||||||||||||||||| Sbjct: 175515 ctgcttcaggccctcgctgt 175534
>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human BAC Library) complete sequence Length = 171236 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aatgaaatgaaagctaaatg 32 |||||||||||||||||||| Sbjct: 60679 aatgaaatgaaagctaaatg 60698
>dbj|AK145485.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0004A05 product:protein phosphatase 1, regulatory subunit 10, full insert sequence Length = 3667 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 2390 cctccgtgtccagggccttc 2371
>gb|AY942619.1| Leishmania braziliensis strain MHOM/PE/95/LQ2 heat shock protein (hsp-83) gene, complete cds Length = 3520 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 agctccttgatgatggggtg 346 |||||||||||||||||||| Sbjct: 2455 agctccttgatgatggggtg 2436
>gb|AC104820.4| Homo sapiens BAC clone RP11-739A13 from 2, complete sequence Length = 161786 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ctaatgaaatgaaagctaaatggg 34 ||||||||| |||||||||||||| Sbjct: 22238 ctaatgaaaagaaagctaaatggg 22261
>gb|AF247812.1|AF247812 Rattus norvegicus transcription factor FKHR mRNA, partial cds Length = 1000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 atctccaggaccctcttgcc 376 |||||||||||||||||||| Sbjct: 336 atctccaggaccctcttgcc 317
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 gcttcaggccctcgctgtcg 302 |||||||||||||||||||| Sbjct: 9004724 gcttcaggccctcgctgtcg 9004705 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gcttcaggccctcgctgtcg 302 |||||||||||||||||||| Sbjct: 5172865 gcttcaggccctcgctgtcg 5172884
>ref|XM_342244.2| PREDICTED: Rattus norvegicus forkhead box O1A (Foxo1a), mRNA Length = 4171 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 atctccaggaccctcttgcc 376 |||||||||||||||||||| Sbjct: 1259 atctccaggaccctcttgcc 1240
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 tccggctcctccgcctcctgcttggccg 105 ||||||||||||||||||| ||| |||| Sbjct: 48116 tccggctcctccgcctcctccttcgccg 48143
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 78 tccggctcctccgcctcctgcttggccg 105 ||||||||||||||||||| ||| |||| Sbjct: 127670 tccggctcctccgcctcctccttcgccg 127697
>gb|BC004771.1| Mus musculus protein phosphatase 1, regulatory subunit 10, mRNA (cDNA clone IMAGE:3157989), partial cds Length = 1658 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 379 cctccgtgtccagggccttc 360
>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence Length = 174952 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctaatgaaatgaaagctaaa 30 |||||||||||||||||||| Sbjct: 56061 ctaatgaaatgaaagctaaa 56080
>dbj|AP000785.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-619A14, complete sequence Length = 126000 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 ggggctcaggtccaggctct 183 |||||||||||||||||||| Sbjct: 18841 ggggctcaggtccaggctct 18822
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctcctccgcctcctgcttgg 102 |||||||||||||||||||| Sbjct: 1682827 ctcctccgcctcctgcttgg 1682846
>emb|CR974451.9| Mouse DNA sequence from clone RP24-180B11 on chromosome 17, complete sequence Length = 188873 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 cctccgtgtccagggccttc 539 |||||||||||||||||||| Sbjct: 155143 cctccgtgtccagggccttc 155124
>dbj|AB022081.1| Brassica rapa DNA for ORF-c, complete cds Length = 573 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tcttctccatgttggaactc 446 |||||||||||||||||||| Sbjct: 401 tcttctccatgttggaactc 382
>dbj|D86216.1| Thermus aquaticus DNA for trehalose synthase, complete cds Length = 4219 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 ttgatctccaggaccctcttgccg 377 |||| ||||||||||||||||||| Sbjct: 485 ttgagctccaggaccctcttgccg 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,775,624 Number of Sequences: 3902068 Number of extensions: 4775624 Number of successful extensions: 111353 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110820 Number of HSP's gapped (non-prelim): 530 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
