ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13j09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483184.1| Oryza sativa (japonica cultivar-group), mRNA 369 7e-99
2ref|XM_483185.1| Oryza sativa (japonica cultivar-group), mRNA 369 7e-99
3dbj|AK065120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 7e-99
4dbj|AK064832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 7e-99
5gb|AY772416.1| Oryza sativa (japonica cultivar-group) peroxisoma... 361 2e-96
6gb|AY772415.1| Oryza sativa (japonica cultivar-group) peroxisoma... 361 2e-96
7gb|BT018851.1| Zea mays clone EL01N0555H04.d mRNA sequence 297 2e-77
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
10gb|AF056282.1|AF056282 Nicotiana tabacum clone 165 peroxisomal t... 119 1e-23
11gb|AY111328.1| Zea mays CL29436_1 mRNA sequence 117 5e-23
12gb|AF068690.1|AF068690 Citrullus lanatus peroxisomal targeting s... 105 2e-19
13gb|AF056283.1|AF056283 Nicotiana tabacum clone 354 peroxisomal t... 103 7e-19
14gb|AF053104.1|AF053104 Nicotiana tabacum peroxisomal targeting s... 103 7e-19
15ref|NM_125012.3| Arabidopsis thaliana PEX5; peroxisome targeting... 62 2e-06
16gb|AY096679.1| Arabidopsis thaliana putative peroxisomal targeti... 62 2e-06
17gb|AY056299.1| Arabidopsis thaliana putative peroxisomal targeti... 62 2e-06
18gb|AF074843.1|AF074843 Arabidopsis thaliana peroxisomal targetin... 62 2e-06
19gb|DQ288941.1| Brassica napus peroxisomal import receptor PTS1 m... 62 2e-06
20gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete s... 56 1e-04
21dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 6e-04
22gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complet... 50 0.009
23gb|AC141879.5| Mus musculus BAC clone RP24-249I4 from chromosome... 42 2.2
24gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, com... 42 2.2
25gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, comple... 42 2.2
26gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 ma... 42 2.2
27gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, com... 40 8.6
28gb|AC147344.2| Pan troglodytes BAC clone CH251-4O16 from Y, comp... 40 8.6
29gb|AC146206.3| Pan troglodytes BAC clone CH251-395K13 from Y, co... 40 8.6
30ref|XM_847882.1| PREDICTED: Canis familiaris similar to Actin-bi... 40 8.6
31ref|XM_673223.1| Plasmodium berghei strain ANKA guanylyl cyclase... 40 8.6
32emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chro... 40 8.6
33gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, comple... 40 8.6
34dbj|BS000553.1| Pan troglodytes chromosome Y clone:PTB-310C12, c... 40 8.6
35gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cance... 40 8.6
36gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.6
37dbj|AK154777.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.6
38gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosom... 40 8.6
39ref|NM_062819.2| Caenorhabditis elegans Fem-3 mRNA Binding Facto... 40 8.6
40dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
42emb|BX833122.1|CNS09ZA3 Arabidopsis thaliana Full-length cDNA Co... 40 8.6
43gb|AY913763.1| Pan troglodytes ZFY (ZFY) gene, complete cds 40 8.6
44gb|U23176.2| Caenorhabditis elegans cosmid F21H12, complete sequ... 40 8.6
45dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
46gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Can... 40 8.6
47dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
48dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6 
>ref|XM_483184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2693

 Score =  369 bits (186), Expect = 7e-99
 Identities = 308/349 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2328 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2269

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2268 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2209

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2208 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2149

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2148 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2089

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2088 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2029

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 2028 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1980
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>ref|XM_483185.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2526

 Score =  369 bits (186), Expect = 7e-99
 Identities = 308/349 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2161 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2102

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2101 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2042

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2041 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1982

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1981 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1922

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1921 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1862

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 1861 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1813
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>dbj|AK065120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O15, full
            insert sequence
          Length = 2693

 Score =  369 bits (186), Expect = 7e-99
 Identities = 308/349 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2328 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2269

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2268 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2209

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2208 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2149

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2148 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2089

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2088 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2029

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 2028 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1980
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>dbj|AK064832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F17, full
            insert sequence
          Length = 2526

 Score =  369 bits (186), Expect = 7e-99
 Identities = 308/349 (88%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2161 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2102

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2101 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2042

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2041 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1982

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1981 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1922

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1921 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1862

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 1861 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1813
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>gb|AY772416.1| Oryza sativa (japonica cultivar-group) peroxisomal targeting signal 1
            receptor short form (PEX5) mRNA, complete cds,
            alternatively spliced
          Length = 2527

 Score =  361 bits (182), Expect = 2e-96
 Identities = 307/349 (87%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| ||| |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2143 aatgcctaaaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2084

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2083 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2024

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2023 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 1964

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 1963 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 1904

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 1903 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 1844

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 1843 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1795
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>gb|AY772415.1| Oryza sativa (japonica cultivar-group) peroxisomal targeting signal 1
            receptor long form (PEX5) mRNA, complete cds,
            alternatively spliced
          Length = 2698

 Score =  361 bits (182), Expect = 2e-96
 Identities = 307/349 (87%)
 Strand = Plus / Minus

                                                                        
Query: 280  aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
            |||| ||| |||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 2314 aatgcctaaaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 2255

                                                                        
Query: 340  gaatcacatgcagcaatcatatcactgcgtgaagcattaccaagtgaaattctcaagtac 399
            |||||||||||||| ||||| |||   |||||||| |||| ||| ||||| | |||||||
Sbjct: 2254 gaatcacatgcagcgatcatgtcagctcgtgaagcgttactaagagaaatccgcaagtac 2195

                                                                        
Query: 400  tgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccgaatggaa 459
            |||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||||| || 
Sbjct: 2194 tgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcgaatagag 2135

                                                                        
Query: 460  tcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacggacgtag 519
            ||||| ||||  |||||||||||||||||||| |||||||||||||||||||| || || 
Sbjct: 2134 tcttcatacaatccctggttggcatagctaatccccatattagcccatgcacgcacataa 2075

                                                                        
Query: 520  ttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctggatgctg 579
            |||||||| || || |||||||| || || |||| ||  |||||||||||||||||||||
Sbjct: 2074 ttgggctttaagtccagagcctgttgataggccaatattgcatcagcactctggatgctg 2015

                                                             
Query: 580  tttgcttgggtcgcaccgagcttgttccaaagagaatagtcttgtggtt 628
            ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 2014 tttgcttgggtcgcacctagcttattccagagagaatagtcttgtggtt 1966
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>gb|BT018851.1| Zea mays clone EL01N0555H04.d mRNA sequence
          Length = 2135

 Score =  297 bits (150), Expect = 2e-77
 Identities = 287/333 (86%)
 Strand = Plus / Minus

                                                                        
Query: 296  ggactcagaggggaaactctttctgaaggacgtcaaggttgcgggaatcacatgcagcaa 355
            |||||||||| |||||||||||||||||  |||| ||||||||||  || ||||| ||||
Sbjct: 1805 ggactcagagaggaaactctttctgaagagcgtcgaggttgcgggcgtcgcatgcggcaa 1746

                                                                        
Query: 356  tcatatcactgcgtgaagcattaccaagtgaaattctcaagtactgccaggcattgtctg 415
            |||| |||   | |||||| || ||||| ||||| |||||||||||||| || ||||| |
Sbjct: 1745 tcatgtcagctcttgaagcgttgccaagagaaatcctcaagtactgccaagcgttgtcag 1686

                                                                        
Query: 416  ctttcggattcatggaaaccgcccttacatagtaccgaatggaatcttcgtacagaccct 475
            |||| || ||||| | ||| |||||||||||||| ||||||||||| || ||||||||||
Sbjct: 1685 cttttgggttcattgtaactgcccttacatagtatcgaatggaatcctcatacagaccct 1626

                                                                        
Query: 476  ggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaatcta 535
            ||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||| ||||
Sbjct: 1625 ggttggcatagctgattcccatgttcgcccatgcacgcacgtagttgggtttcaagtcta 1566

                                                                        
Query: 536  gagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtcgcac 595
            | |||||||| || |||| ||  |||||||||||||||||||||||||||||||| ||||
Sbjct: 1565 gtgcctgctgatacgccaatattgcatcagcactctggatgctgtttgcttgggttgcac 1506

                                             
Query: 596  cgagcttgttccaaagagaatagtcttgtggtt 628
            | ||||||||||| || || ||||| |||||||
Sbjct: 1505 caagcttgttccagagtgagtagtcctgtggtt 1473
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 280      aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
                |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 24686878 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 24686819

                                    
Query: 340      gaatcacatgcagcaatcat 359
                |||||||||||||| |||||
Sbjct: 24686818 gaatcacatgcagcgatcat 24686799



 Score =  115 bits (58), Expect = 2e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                            
Query: 559      gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 618
                |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 24684958 gcatcagcactctggatgctgtttgcttgggtcgcacctagcttattccagagagaatag 24684899

                          
Query: 619      tcttgtggtt 628
                ||||||||||
Sbjct: 24684898 tcttgtggtt 24684889



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 473      cctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaat 532
                ||||||||||||||||||| |||||||||||||||||||| || || |||||||| || |
Sbjct: 24685951 cctggttggcatagctaatccccatattagcccatgcacgcacataattgggctttaagt 24685892

                          
Query: 533      ctagagcctg 542
                | ||||||||
Sbjct: 24685891 ccagagcctg 24685882



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                            
Query: 393      caagtactgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccg 452
                ||||||||||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||
Sbjct: 24686511 caagtactgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcg 24686452

                                 
Query: 453      aatggaatcttcgtaca 469
                ||| || ||||| ||||
Sbjct: 24686451 aatagagtcttcataca 24686435
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score =  119 bits (60), Expect = 1e-23
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                         
Query: 280   aatgtctagaatgtttggactcagaggggaaactctttctgaaggacgtcaaggttgcgg 339
             |||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 59182 aatgcctagaatgtttggactcacaggggaaactctttctgaagaacgtcaaggttgcgt 59123

                                 
Query: 340   gaatcacatgcagcaatcat 359
             |||||||||||||| |||||
Sbjct: 59122 gaatcacatgcagcgatcat 59103



 Score =  115 bits (58), Expect = 2e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                         
Query: 559   gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 618
             |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 57262 gcatcagcactctggatgctgtttgcttgggtcgcacctagcttattccagagagaatag 57203

                       
Query: 619   tcttgtggtt 628
             ||||||||||
Sbjct: 57202 tcttgtggtt 57193



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                         
Query: 473   cctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaat 532
             ||||||||||||||||||| |||||||||||||||||||| || || |||||||| || |
Sbjct: 58255 cctggttggcatagctaatccccatattagcccatgcacgcacataattgggctttaagt 58196

                       
Query: 533   ctagagcctg 542
             | ||||||||
Sbjct: 58195 ccagagcctg 58186



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                         
Query: 393   caagtactgccaggcattgtctgctttcggattcatggaaaccgcccttacatagtaccg 452
             ||||||||||||||||||||| ||||| |||||||| | |||||||| ||||||||| ||
Sbjct: 58815 caagtactgccaggcattgtcagcttttggattcatagcaaccgcccgtacatagtatcg 58756

                              
Query: 453   aatggaatcttcgtaca 469
             ||| || ||||| ||||
Sbjct: 58755 aatagagtcttcataca 58739
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>gb|AF056282.1|AF056282 Nicotiana tabacum clone 165 peroxisomal targeting sequence 1 receptor
            (PEX5) mRNA, partial cds
          Length = 2078

 Score =  119 bits (60), Expect = 1e-23
 Identities = 131/155 (84%)
 Strand = Plus / Minus

                                                                        
Query: 454  atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 513
            |||||||| || |||| ||||||||||||||| || |||||||| || ||||||||||| 
Sbjct: 1505 atggaatcctcatacataccctggttggcataactgattcccatgtttgcccatgcacgt 1446

                                                                        
Query: 514  acgtagttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctgg 573
            || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 1445 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 1386

                                               
Query: 574  atgctgtttgcttgggtcgcaccgagcttgttcca 608
            | |||||| ||||| || ||||| ||||| |||||
Sbjct: 1385 acgctgttagcttgtgttgcaccaagcttattcca 1351
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>gb|AY111328.1| Zea mays CL29436_1 mRNA sequence
          Length = 700

 Score =  117 bits (59), Expect = 5e-23
 Identities = 136/162 (83%)
 Strand = Plus / Plus

                                                                       
Query: 415 gctttcggattcatggaaaccgcccttacatagtaccgaatggaatcttcgtacagaccc 474
           ||||| || ||||| | ||| |||||||||||||| ||||||||||| || ||||  |||
Sbjct: 539 gcttttgggttcattgcaactgcccttacatagtatcgaatggaatcctcatacaacccc 598

                                                                       
Query: 475 tggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaatct 534
           |||||||||||| |     ||||||| ||||||||||| ||||||||||| ||||| || 
Sbjct: 599 tggttggcatagattcccaccatattcgcccatgcacgcacgtagttgggtttcaagtcc 658

                                                     
Query: 535 agagcctgctggtatgccagtacngcatcagcactctggatg 576
           ||||||||||| || |||| ||  ||||||||||||||||||
Sbjct: 659 agagcctgctgatacgccaatattgcatcagcactctggatg 700



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 307 ggaaactctttctgaaggacgtcaaggttgcggg 340
           |||||||||||||||||  |||||||||||||||
Sbjct: 431 ggaaactctttctgaagagcgtcaaggttgcggg 464
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>gb|AF068690.1|AF068690 Citrullus lanatus peroxisomal targeting signal-1 receptor (PEX5)
            mRNA, complete cds
          Length = 2503

 Score =  105 bits (53), Expect = 2e-19
 Identities = 127/152 (83%)
 Strand = Plus / Minus

                                                                        
Query: 472  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 531
            ||||| || ||||| || ||||||||||| ||||| ||||| ||||| || |||||||||
Sbjct: 1831 ccctgattagcataactgattcccatattggcccaggcacgtacgtaattaggcttcaaa 1772

                                                                        
Query: 532  tctagagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtc 591
            || || ||||| || || || | ||  ||||||||||| || |||||||| ||||| || 
Sbjct: 1771 tcaagtgcctgttgataagctaatatagcatcagcactttgaatgctgttagcttgtgta 1712

                                            
Query: 592  gcaccgagcttgttccaaagagaatagtcttg 623
            ||||| |||||||||||||||||||| |||||
Sbjct: 1711 gcacctagcttgttccaaagagaataatcttg 1680
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>gb|AF056283.1|AF056283 Nicotiana tabacum clone 354 peroxisomal targeting sequence 1
           receptor (PEX5) mRNA, partial cds
          Length = 1474

 Score =  103 bits (52), Expect = 7e-19
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                       
Query: 454 atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 513
           |||||||| || |||| |||||||||||| || || |||||||| || ||||||||||| 
Sbjct: 845 atggaatcctcatacataccctggttggcgtaactgattcccatgtttgcccatgcacgt 786

                                                                       
Query: 514 acgtagttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctgg 573
           || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 785 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 726

                                              
Query: 574 atgctgtttgcttgggtcgcaccgagcttgttcca 608
           |  ||||| ||||| || ||||| ||||| |||||
Sbjct: 725 acactgttagcttgtgttgcaccaagcttattcca 691
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>gb|AF053104.1|AF053104 Nicotiana tabacum peroxisomal targeting signal 1 receptor (PEX5)
            mRNA, complete cds
          Length = 2823

 Score =  103 bits (52), Expect = 7e-19
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 454  atggaatcttcgtacagaccctggttggcatagctaattcccatattagcccatgcacgg 513
            |||||||| || |||| |||||||||||| || || |||||||| || ||||||||||| 
Sbjct: 2213 atggaatcctcatacataccctggttggcgtaactgattcccatgtttgcccatgcacgt 2154

                                                                        
Query: 514  acgtagttgggcttcaaatctagagcctgctggtatgccagtacngcatcagcactctgg 573
            || ||||| ||||| |||||||| |||||||| || |||| ||  |||||||||||||| 
Sbjct: 2153 acatagttaggctttaaatctagcgcctgctgataagccaatattgcatcagcactctga 2094

                                               
Query: 574  atgctgtttgcttgggtcgcaccgagcttgttcca 608
            |  ||||| ||||| || ||||| ||||| |||||
Sbjct: 2093 acactgttagcttgtgttgcaccaagcttattcca 2059
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>ref|NM_125012.3| Arabidopsis thaliana PEX5; peroxisome targeting signal-1 binding
            AT5G56290 (PEX5) mRNA, complete cds
          Length = 2460

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 472  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 531
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2141 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2082

                                                                        
Query: 532  tctagagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtc 591
            ||||||||||| || || ||   ||  ||||||||||||||||  ||||| ||||| || 
Sbjct: 2081 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2022

                                      
Query: 592  gcaccgagcttgttccaaagagaata 617
            ||||| ||||| ||||| ||||||||
Sbjct: 2021 gcacctagcttattccacagagaata 1996
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>gb|AY096679.1| Arabidopsis thaliana putative peroxisomal targeting signal type 1
            receptor protein (At5g56290) mRNA, complete cds
          Length = 2218

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 472  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 531
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2015 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 1956

                                                                        
Query: 532  tctagagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtc 591
            ||||||||||| || || ||   ||  ||||||||||||||||  ||||| ||||| || 
Sbjct: 1955 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 1896

                                      
Query: 592  gcaccgagcttgttccaaagagaata 617
            ||||| ||||| ||||| ||||||||
Sbjct: 1895 gcacctagcttattccacagagaata 1870
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>gb|AY056299.1| Arabidopsis thaliana putative peroxisomal targeting signal type 1
            receptor protein (At5g56290) mRNA, complete cds
          Length = 2470

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 472  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 531
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2134 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2075

                                                                        
Query: 532  tctagagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtc 591
            ||||||||||| || || ||   ||  ||||||||||||||||  ||||| ||||| || 
Sbjct: 2074 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2015

                                      
Query: 592  gcaccgagcttgttccaaagagaata 617
            ||||| ||||| ||||| ||||||||
Sbjct: 2014 gcacctagcttattccacagagaata 1989
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>gb|AF074843.1|AF074843 Arabidopsis thaliana peroxisomal targeting signal type 1 receptor
            (PEX5) mRNA, complete cds
          Length = 2316

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 472  ccctggttggcatagctaattcccatattagcccatgcacggacgtagttgggcttcaaa 531
            |||||||| || || || |||||||| || ||||| ||||| || || || || || |||
Sbjct: 2144 ccctggtttgcgtaactgattcccatgtttgcccaagcacgaacataatttggttttaaa 2085

                                                                        
Query: 532  tctagagcctgctggtatgccagtacngcatcagcactctggatgctgtttgcttgggtc 591
            ||||||||||| || || ||   ||  ||||||||||||||||  ||||| ||||| || 
Sbjct: 2084 tctagagcctgttgataagcagatatggcatcagcactctggacactgttggcttgcgtt 2025

                                      
Query: 592  gcaccgagcttgttccaaagagaata 617
            ||||| ||||| ||||| ||||||||
Sbjct: 2024 gcacctagcttattccacagagaata 1999
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>gb|DQ288941.1| Brassica napus peroxisomal import receptor PTS1 mRNA, complete cds
          Length = 2424

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 559  gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaata 617
            ||||||||||||||||  ||||| ||||| || ||||| ||||| ||||||||||||||
Sbjct: 1937 gcatcagcactctggacactgttggcttgtgttgcaccaagcttattccaaagagaata 1879
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>gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete sequence
          Length = 132878

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                          
Query: 559    gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaatag 618
              ||||||||||| || |  ||||||||||| || ||||| ||||||||||| ||||| || 
Sbjct: 128514 gcatcagcactttgaacactgtttgcttgtgttgcaccaagcttgttccagagagagtaa 128573

                      
Query: 619    tcttgtgg 626
              ||||||||
Sbjct: 128574 tcttgtgg 128581



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 384    tgaaattctcaagtactgccaggcattgtctgctttcggattcatgg 430
              |||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 125017 tgaaattctcaaatattgccatgcattctctgcttttggattcatgg 125063
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>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7
          Length = 87685

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 559  gcatcagcactctggatgctgtttgcttgggtcgcaccgagcttgttccaaagagaata 617
            ||||||||||||||||  ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct: 4558 gcatcagcactctggacactgttggcttgcgttgcacctagcttattccacagagaata 4500
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>gb|AC093870.3| Homo sapiens BAC clone RP11-598G2 from 4, complete sequence
          Length = 193650

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 566    cactctggatgctgtttgcttgggt 590
              |||||||||||||||||||||||||
Sbjct: 176941 cactctggatgctgtttgcttgggt 176965
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>gb|AC141879.5| Mus musculus BAC clone RP24-249I4 from chromosome 16, complete sequence
          Length = 148167

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   caatctgtgtttgtttctcct 200
             |||||||||||||||||||||
Sbjct: 61334 caatctgtgtttgtttctcct 61314
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>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence
          Length = 166581

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   ttgtttctccttcccattcca 210
             |||||||||||||||||||||
Sbjct: 75425 ttgtttctccttcccattcca 75405
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>gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, complete sequence
          Length = 153304

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   tctgtgtttgtttctccttcc 203
             |||||||||||||||||||||
Sbjct: 42444 tctgtgtttgtttctccttcc 42464
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>gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 map 5, complete sequence
          Length = 117052

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    ttgtttctccttcccattcca 210
              |||||||||||||||||||||
Sbjct: 108166 ttgtttctccttcccattcca 108186
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>gb|AC125079.3| Mus musculus chromosome 16 clone RP23-480M17, complete sequence
          Length = 174536

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    tctgccatgggattttacat 74
             ||||||||||||||||||||
Sbjct: 75474 tctgccatgggattttacat 75493
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>gb|AC147344.2| Pan troglodytes BAC clone CH251-4O16 from Y, complete sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ttgtatacagaattacatat 28
             ||||||||||||||||||||
Sbjct: 22449 ttgtatacagaattacatat 22430
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>gb|AC146206.3| Pan troglodytes BAC clone CH251-395K13 from Y, complete sequence
          Length = 161960

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ttgtatacagaattacatat 28
              ||||||||||||||||||||
Sbjct: 152285 ttgtatacagaattacatat 152304
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>ref|XM_847882.1| PREDICTED: Canis familiaris similar to Actin-binding LIM protein 2
            (Actin-binding LIM protein family member 2) (abLIM2)
            (LOC610389), mRNA
          Length = 3487

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   tgcaaccactgtttctgcca 61
            ||||||||||||||||||||
Sbjct: 2759 tgcaaccactgtttctgcca 2778
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>ref|XM_673223.1| Plasmodium berghei strain ANKA guanylyl cyclase (PB001219.00.0)
            partial mRNA
          Length = 5982

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  taaacagaaaaacacaataacaca 171
            |||||| |||||||||||||||||
Sbjct: 4299 taaacaaaaaaacacaataacaca 4322
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>emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chromosome X, complete
             sequence
          Length = 125933

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   aacagaaaaacacaataaca 169
             ||||||||||||||||||||
Sbjct: 12110 aacagaaaaacacaataaca 12091
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>gb|AC104796.4| Homo sapiens BAC clone RP11-318E19 from 4, complete sequence
          Length = 169106

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    acagaaaaacacaataacac 170
              ||||||||||||||||||||
Sbjct: 130901 acagaaaaacacaataacac 130920
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>dbj|BS000553.1| Pan troglodytes chromosome Y clone:PTB-310C12, complete sequences
          Length = 120948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttgtatacagaattacatat 28
             ||||||||||||||||||||
Sbjct: 72146 ttgtatacagaattacatat 72165
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>gb|AC078784.24| Homo sapiens 3 BAC RP11-63L4 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 165413

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  ttaccaagtgaaattctcaa 395
            ||||||||||||||||||||
Sbjct: 8456 ttaccaagtgaaattctcaa 8437
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 9        ttgtatacagaattacatat 28
                ||||||||||||||||||||
Sbjct: 23522861 ttgtatacagaattacatat 23522842
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>dbj|AK154777.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630106H22
            product:unclassifiable, full insert sequence
          Length = 3351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  tagcttacagtaaacagaaa 157
            ||||||||||||||||||||
Sbjct: 3319 tagcttacagtaaacagaaa 3300
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>gb|AC152502.5| Mus musculus BAC clone RP23-415D12 from chromosome 16, complete sequence
          Length = 180876

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tctgccatgggattttacat 74
              ||||||||||||||||||||
Sbjct: 167347 tctgccatgggattttacat 167328
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>ref|NM_062819.2| Caenorhabditis elegans Fem-3 mRNA Binding Factor family member
            (fbf-2) (fbf-2) mRNA, complete cds
          Length = 2272

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 144  acagtaaacagaaaaacacaataacaca 171
            |||||||||||||| | |||||||||||
Sbjct: 2218 acagtaaacagaaagaaacaataacaca 2191
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 138      tagcttacagtaaacagaaa 157
                ||||||||||||||||||||
Sbjct: 20522809 tagcttacagtaaacagaaa 20522790
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      cagaaaaacacaataacaca 171
                ||||||||||||||||||||
Sbjct: 33387687 cagaaaaacacaataacaca 33387668
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>emb|BX833122.1|CNS09ZA3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL35ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1270

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 101/127 (79%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                       
Query: 492 tcccatattagcccatgcacggacgtagttgggcttcaaatctagagcctgctggtatgc 551
           |||||| || ||||| ||||| || || || || || |||||||||||||| || || ||
Sbjct: 979 tcccatgtttgcccaagcacgaacataatttggttttaaatctagagcctgttgataagc 920

                                                                       
Query: 552 cagtacngcatcag-cactctggatgctgtttgcttgggtcgcaccgagcttgttccaaa 610
              ||  ||||||| |||||||||  ||||| ||||| || ||||| ||||| ||||| |
Sbjct: 919 agatatggcatcagtcactctggacactgttggcttgcgttgcacctagcttattccaca 860

                  
Query: 611 gagaata 617
           |||||||
Sbjct: 859 gagaata 853
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>gb|AY913763.1| Pan troglodytes ZFY (ZFY) gene, complete cds
          Length = 167166

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ttgtatacagaattacatat 28
              ||||||||||||||||||||
Sbjct: 122602 ttgtatacagaattacatat 122621
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>gb|U23176.2| Caenorhabditis elegans cosmid F21H12, complete sequence
          Length = 21805

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 144  acagtaaacagaaaaacacaataacaca 171
            |||||||||||||| | |||||||||||
Sbjct: 6678 acagtaaacagaaagaaacaataacaca 6705
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   tagcttacagtaaacagaaa 157
             ||||||||||||||||||||
Sbjct: 40456 tagcttacagtaaacagaaa 40437
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>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 223830

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tagcttacagtaaacagaaa 157
             ||||||||||||||||||||
Sbjct: 93186 tagcttacagtaaacagaaa 93205
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>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1715_H01
          Length = 138733

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    cagaaaaacacaataacaca 171
              ||||||||||||||||||||
Sbjct: 128437 cagaaaaacacaataacaca 128418
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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   cagaaaaacacaataacaca 171
             ||||||||||||||||||||
Sbjct: 18306 cagaaaaacacaataacaca 18287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,606,862
Number of Sequences: 3902068
Number of extensions: 5606862
Number of successful extensions: 108995
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 108819
Number of HSP's gapped (non-prelim): 173
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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