>NTF2_ORYSA (Q9XJ54) Nuclear transport factor 2 (NTF-2)|
          Length = 122

 Score =  129 bits (324), Expect = 8e-30
 Identities = 58/69 (84%), Positives = 63/69 (91%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPF QC H I+TVDCQPSGPQGG+LVFVSG++ TGP EHPLKFSQMF LLPAGG+FYVQ
Sbjct: 54  SLPFAQCHHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPAGGNFYVQ 113

Query: 479 NDMFRLNYG 453
           NDMFRLNYG
Sbjct: 114 NDMFRLNYG 122

>NTF2_ARATH (Q9C7F5) Nuclear transport factor 2 (NTF-2)|
          Length = 126

 Score =  102 bits (254), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPA-GGSFYV 483
           SLPFQQC+H I TVDCQPSGP  G+LVFVSG +     EH LKFSQMFHL+P   GSFYV
Sbjct: 57  SLPFQQCKHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYV 116

Query: 482 QNDMFRLNY 456
            ND+FRLNY
Sbjct: 117 FNDIFRLNY 125

>NTF2_YEAST (P33331) Nuclear transport factor 2 (NTF-2) (Nuclear transport|
           factor P10)
          Length = 125

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 37/68 (54%), Positives = 51/68 (75%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+ QH+I T+D QP+ P G VLV ++G +     ++P +FSQ+FHL+P G S+YV 
Sbjct: 56  SLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVF 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_KLULA (Q6CQX4) Nuclear transport factor 2 (NTF-2)|
          Length = 125

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+  H+I T+D QP+ P G VLV ++G +     ++P +FSQ+FHL+P G S+YV 
Sbjct: 56  SLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDEEQNPQRFSQVFHLMPEGSSYYVY 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_CANGA (Q6FRC6) Nuclear transport factor 2 (NTF-2)|
          Length = 125

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+  H+I T+D QP+ P G VLV ++G +     ++P +FSQ+FHL+P G S+YV 
Sbjct: 56  SLPFQKVAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIPDGNSYYVF 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_ASHGO (Q75AA5) Nuclear transport factor 2 (NTF-2)|
          Length = 125

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+ QH+I T+D QP+ P G VLV ++G +     ++  +FSQ+FHL+P G S+YV 
Sbjct: 56  SLPFQKVQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMPEGNSYYVF 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_DEBHA (Q6BWC0) Nuclear transport factor 2 (NTF-2)|
          Length = 124

 Score = 79.3 bits (194), Expect = 9e-15
 Identities = 34/68 (50%), Positives = 48/68 (70%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+  H+I T+D QP  P G +LV V+G +     ++  ++SQ+FHL+P G S+YV 
Sbjct: 56  SLPFQKVAHRISTLDAQPGSPNGDILVMVTGELIIDDEQNAQRYSQVFHLIPDGNSYYVF 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_SCHPO (Q10100) Nuclear transport factor 2 (NTF-2)|
          Length = 123

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 34/69 (49%), Positives = 49/69 (71%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+ QH+I T+D QP+G  G V+V V+G +     +   ++SQ+FHL+   G++YV 
Sbjct: 55  SLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVL 114

Query: 479 NDMFRLNYG 453
           ND+FRLNYG
Sbjct: 115 NDLFRLNYG 123

>NTF2_EMENI (Q96VN3) Nuclear transport factor 2 (NTF-2)|
          Length = 125

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAG-GSFYV 483
           SLPFQ+ QH++ T+D QPSG  GG+LV V+G +     ++P+ ++Q F L+P G GS++V
Sbjct: 55  SLPFQKVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFV 114

Query: 482 QNDMFRLNY 456
            ND+FRL Y
Sbjct: 115 LNDVFRLIY 123

>NTF2_CLAHE (Q8NJ52) Nuclear transport factor 2 (NTF-2) (Allergen Cla h ?)|
          Length = 125

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -1

Query: 656 LPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQN 477
           LPFQ+ +H++ TVD QPS   GG+LV VSG +       P+ ++Q F LLPA G++YV N
Sbjct: 56  LPFQRIEHQVATVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPADGAYYVFN 115

Query: 476 DMFRLNY 456
           D+FRL Y
Sbjct: 116 DVFRLVY 122

>NTF2_CANAL (Q9P926) Nuclear transport factor 2 (NTF-2)|
          Length = 124

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 33/68 (48%), Positives = 48/68 (70%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           SLPFQ+  H+I T+D QP+   G +LV V+G +     ++  ++SQ+FHL+P  GS+YV 
Sbjct: 56  SLPFQKVAHRISTLDAQPASANGDILVMVTGELLIDEEQNAQRYSQVFHLIPDNGSYYVF 115

Query: 479 NDMFRLNY 456
           ND+FRLNY
Sbjct: 116 NDIFRLNY 123

>NTF2_YARLI (Q6CC82) Nuclear transport factor 2 (NTF-2)|
          Length = 123

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
 Frame = -1

Query: 656 LPFQQCQHKIDTVDCQPSGPQGG-VLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQ 480
           LPF Q +HKI  +D QP+  QGG V+V V+G +    G++PL ++Q+FHL+P G S+YV 
Sbjct: 57  LPFGQVRHKISDIDAQPASAQGGDVIVLVTGELCVD-GDNPLPYAQVFHLIPDGSSYYVF 115

Query: 479 NDMFRLN 459
           ND+FRLN
Sbjct: 116 NDIFRLN 122

>NTF2_NEUCR (P87102) Nuclear transport factor 2 (NTF-2)|
          Length = 124

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHL-LPAGGSFYV 483
           SLPFQ+ +H+    D QP+   GG+++ V+G +     + PL +SQ F L   A G ++V
Sbjct: 56  SLPFQKVKHEYGPPDAQPTAT-GGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFV 114

Query: 482 QNDMFRL 462
            ND+F+L
Sbjct: 115 FNDIFKL 121

>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG---SF 489
           SL F +C  KI  VD   +    GV+V V G ++   G+   KF Q F L P G     F
Sbjct: 67  SLNFSECHTKIRHVDAHAT-LSDGVVVQVMGLLSNS-GQPERKFMQTFVLAPEGSVPNKF 124

Query: 488 YVQNDMFR 465
           YV NDMFR
Sbjct: 125 YVHNDMFR 132

>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP|
           SH3-domain-binding protein 2) (G3BP-2)
          Length = 482

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG---SF 489
           SL F +C  KI  VD   +    GV+V V G ++   G+   KF Q F L P G     F
Sbjct: 67  SLNFSECHTKIRHVDAHAT-LSDGVVVQVMGLLSNS-GQPERKFMQTFVLAPEGSVPNKF 124

Query: 488 YVQNDMFR 465
           YV NDMFR
Sbjct: 125 YVHNDMFR 132

>NTF2_RAT (P61972) Nuclear transport factor 2 (NTF-2)|
          Length = 127

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYV 483
           SLPFQ+ QH I   D QP+ P   ++  V G +     E P+  F QMF L     ++  
Sbjct: 58  SLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVC 114

Query: 482 QNDMFRL---NYG 453
            NDMFRL   N+G
Sbjct: 115 TNDMFRLALHNFG 127

>NTF2_MOUSE (P61971) Nuclear transport factor 2 (NTF-2)|
          Length = 127

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYV 483
           SLPFQ+ QH I   D QP+ P   ++  V G +     E P+  F QMF L     ++  
Sbjct: 58  SLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVC 114

Query: 482 QNDMFRL---NYG 453
            NDMFRL   N+G
Sbjct: 115 TNDMFRLALHNFG 127

>NTF2_HUMAN (P61970) Nuclear transport factor 2 (NTF-2) (Placental protein 15)|
           (PP15)
          Length = 127

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAGGSFYV 483
           SLPFQ+ QH I   D QP+ P   ++  V G +     E P+  F QMF L     ++  
Sbjct: 58  SLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLKA--DEDPIMGFHQMFLLKNINDAWVC 114

Query: 482 QNDMFRL---NYG 453
            NDMFRL   N+G
Sbjct: 115 TNDMFRLALHNFG 127

>G3BP_SCHPO (O94260) Putative G3BP-like protein|
          Length = 434

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 23/64 (35%), Positives = 34/64 (53%)
 Frame = -1

Query: 656 LPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQN 477
           L FQ C+  I  VD   S   GG+++ V G ++   G+   KF+Q F L      ++V N
Sbjct: 72  LDFQNCKVLISNVDSLASS-NGGIVIQVLGEMSN-KGKLSRKFAQTFFLAEQPNGYFVLN 129

Query: 476 DMFR 465
           D+FR
Sbjct: 130 DIFR 133

>NTF2_CAEEL (Q21735) Probable nuclear transport factor 2 (NTF-2)|
          Length = 133

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
 Frame = -1

Query: 659 SLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLK-FSQMFHLLPAG-GSFY 486
           +L F + Q  I  +D QP    G + V V G + T   E P+  FSQ+F L P   GS++
Sbjct: 64  TLGFTKIQRAITVIDSQPLY-DGSIQVMVLGQLKTD--EDPINPFSQVFILRPNNQGSYF 120

Query: 485 VQNDMFRLN 459
           + N++FRL+
Sbjct: 121 IGNEIFRLD 129

>NTF2_XENLA (O42242) Nuclear transport factor 2 (NTF-2) (p10)|
          Length = 127

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = -1

Query: 656 LPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQN 477
           LPFQ+ QH I + D QP+ P   ++  V G +     +  + F Q+F L     ++   N
Sbjct: 59  LPFQKIQHSITSQDHQPT-PDSCIISMVVGQL-KADDDPIMGFHQVFLLKNIQDAWVCTN 116

Query: 476 DMFRL---NYG 453
           DMFRL   N+G
Sbjct: 117 DMFRLALHNFG 127

>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 465

 Score = 32.7 bits (73), Expect = 0.99
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -1

Query: 650 FQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG---SFYVQ 480
           F  C  KI  VD   +    GV+V V G ++    +   +F Q F L P G     FYV 
Sbjct: 70  FTNCHTKIRHVDAHAT-LNDGVVVQVMGLLSNN-NQALRRFMQTFVLAPEGSVANKFYVH 127

Query: 479 NDMFR 465
           ND+FR
Sbjct: 128 NDIFR 132

>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC|
           3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP
           SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII)
          Length = 466

 Score = 32.7 bits (73), Expect = 0.99
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = -1

Query: 650 FQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGG---SFYVQ 480
           F  C  KI  VD   +    GV+V V G ++    +   +F Q F L P G     FYV 
Sbjct: 70  FTNCHTKIRHVDAHAT-LNDGVVVQVMGLLSNN-NQALRRFMQTFVLAPEGSVANKFYVH 127

Query: 479 NDMFR 465
           ND+FR
Sbjct: 128 NDIFR 132

>PEPX_BACAN (Q81PE9) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)|
           (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl
           aminopeptidase) (X-PDAP)
          Length = 597

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 507 ASWRELLRAE*HVPPELWLRKGGHSGSKELD 415
           A W E L  E +VP ++WL +GGH G+   D
Sbjct: 345 AQWWEAL-GENNVPRKMWLHQGGHGGTSTND 374

>YNI7_YEAST (P48231) Hypothetical 132.5 kDa protein in TOP2-MKT1 intergenic|
           region
          Length = 1178

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 261 LGSTFFGMLMETVLVLVMRGISGFVL*RFKFTFACPRVSSLSTNL 127
           L   F+G     V +L++ G+  FVL  FKF+ A   +  L+T +
Sbjct: 91  LPDKFYGDWYHEVAILIIAGLCSFVLGYFKFSLASVLIVMLTTGM 135

>GCR_TUPGB (Q95267) Glucocorticoid receptor (GR)|
          Length = 776

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 146 ETLGHAKVNLNRHKTNPEMPRITNTRTVSINIPKKVLPKQRQYMENTKQKM 298
           + L  +  NLNR  + PE P+I+ +  VS  + KK LP+    + + +Q +
Sbjct: 120 QLLEESIANLNRSTSVPEHPKISASVAVSAALLKKELPETPSDVSSEQQNL 170

>PEPX_BACCR (Q81CB2) Putative Xaa-Pro dipeptidyl-peptidase (EC 3.4.14.11)|
           (X-Pro dipeptidyl-peptidase) (X-prolyl-dipeptidyl
           aminopeptidase) (X-PDAP)
          Length = 580

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 507 ASWRELLRAE*HVPPELWLRKGGHSGS 427
           A W E L  E +VP ++WL +GGH G+
Sbjct: 328 AQWWEAL-GENNVPRKMWLHQGGHGGT 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,702,076
Number of Sequences: 219361
Number of extensions: 1914732
Number of successful extensions: 4968
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4961
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)