ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13j07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 671 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 446 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 387 Query: 506 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 565 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 386 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 327 Query: 566 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 625 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 326 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 267 Query: 626 cgatcttgtgctggcactgctggaaggggag 656 ||| | ||| ||||||||| ||||||||| Sbjct: 266 tgatgtcgtggtggcactgcgcgaaggggag 236
>dbj|AK119730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-H12, full insert sequence Length = 672 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 447 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 388 Query: 506 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 565 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 387 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 328 Query: 566 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 625 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 327 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 268 Query: 626 cgatcttgtgctggcactgctggaaggggag 656 ||| | ||| ||||||||| ||||||||| Sbjct: 267 tgatgtcgtggtggcactgcgcgaaggggag 237
>dbj|AK065141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A14, full insert sequence Length = 671 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 446 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 387 Query: 506 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 565 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 386 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 327 Query: 566 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 625 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 326 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 267 Query: 626 cgatcttgtgctggcactgctggaaggggag 656 ||| | ||| ||||||||| ||||||||| Sbjct: 266 tgatgtcgtggtggcactgcgcgaaggggag 236
>dbj|AB011262.1| Oryza sativa (japonica cultivar-group) mRNA for nuclear transport factor 2 (NTF2), complete cds Length = 661 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 436 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 377 Query: 506 gcagcaaatggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatgg 565 | |||| ||||||||||| ||||||||||||||||||||| ||||||||||| || || Sbjct: 376 gaagcagctggaacatctgggagaacttgagggggtgctcgtcggggccggtgcggaggg 317 Query: 566 tgccggagacgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtat 625 ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||| | Sbjct: 316 atccggagacgaagacgagcatgccgccctgcggccccgacggctggcagtcgacggtgt 257 Query: 626 cgatcttgtgctggcactgctggaaggggag 656 ||| | ||| ||||||||| ||||||||| Sbjct: 256 tgatgtcgtggtggcactgcgcgaaggggag 226
>gb|BT016844.1| Zea mays clone Contig677 mRNA sequence Length = 683 Score = 163 bits (82), Expect = 9e-37 Identities = 175/206 (84%) Strand = Plus / Plus Query: 454 ccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctggcagcaaa 513 ||||||||||||||||||||||||||||||||| ||||| ||| | || ||||||||| Sbjct: 244 ccatagttcaggcggaacatgtcattctgcacgaagaaggacccagctgccggcagcaaa 303 Query: 514 tggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatggtgccggag 573 ||||| ||| |||||||||| ||||||||| ||||||||||| ||||| |||||| Sbjct: 304 tggaatgcctgagagaacttgatggggtgctcctcggggccggtgcggatggaaccggag 363 Query: 574 acgaagacgaggacgccgccctggggccccgagggctggcagtcgacggtatcgatcttg 633 ||||||||||| | ||| |||||||||||||| ||||||||||| ||||| |||||| | Sbjct: 364 acgaagacgagcatgcctccctggggccccgacggctggcagtctacggtgacgatctgg 423 Query: 634 tgctggcactgctggaaggggagaga 659 |||| ||| ||||||||| ||||| Sbjct: 424 tgctcgcaggcctggaagggaagaga 449
>gb|DQ427497.1| Sorghum propinquum locus CSU608 genomic sequence Length = 676 Score = 163 bits (82), Expect = 9e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggccccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|AY103892.1| Zea mays PCO098900 mRNA sequence Length = 855 Score = 163 bits (82), Expect = 9e-37 Identities = 148/170 (87%) Strand = Plus / Minus Query: 454 ccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctggcagcaaa 513 ||||||||||||||||||||||||||||||||| ||||| ||| | || ||||||||| Sbjct: 539 ccatagttcaggcggaacatgtcattctgcacgaagaaggacccagctgccggcagcaaa 480 Query: 514 tggaacatctgtgagaacttgagggggtgctcgccggggccggtggtgatggtgccggag 573 ||||| ||| |||||||||| ||||||||| ||||||||||| ||||| |||||| Sbjct: 479 tggaatgcctgagagaacttgatggggtgctcctcggggccggtgcggatggaaccggag 420 Query: 574 acgaagacgaggacgccgccctggggccccgagggctggcagtcgacggt 623 ||||||||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 419 acgaagacgagcatgcctccctggggccccgacggctggcagtcgacggt 370
>gb|DQ427496.1| Sorghum bicolor voucher PI585454 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427495.1| Sorghum bicolor voucher PI267539b locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427494.1| Sorghum bicolor voucher PI267539a locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427493.1| Sorghum bicolor voucher PI267408 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427492.1| Sorghum bicolor voucher PI221607 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427491.1| Sorghum bicolor voucher PI152702 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427490.1| Sorghum bicolor voucher NSL92371 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427489.1| Sorghum bicolor voucher NSL87902 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427488.1| Sorghum bicolor voucher NSL87666 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427487.1| Sorghum bicolor voucher NSL77217 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427486.1| Sorghum bicolor voucher NSL77034 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427485.1| Sorghum bicolor voucher NSL56174 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427484.1| Sorghum bicolor voucher NSL56003 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427483.1| Sorghum bicolor voucher NSL55243 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427482.1| Sorghum bicolor voucher NSL51365 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427481.1| Sorghum bicolor voucher NSL51030 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427480.1| Sorghum bicolor voucher NSL50875 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>gb|DQ427479.1| Sorghum bicolor voucher BTx623 locus CSU608 genomic sequence Length = 679 Score = 155 bits (78), Expect = 2e-34 Identities = 120/134 (89%) Strand = Plus / Minus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||| Sbjct: 186 gagaacttgagggggtgatcctcggggccggtgcggatggagccggagacgaagacgagc 127 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 ||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 126 acgcctccctggggtcccgacggctggcagtcgacggtgtcgatcttgtgctggcaggcc 67 Query: 646 tggaaggggagaga 659 |||||||||||||| Sbjct: 66 tggaaggggagaga 53
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 26529694 gagaacttgagggggtgctcgtcggggccggtgcggagggatccggagacgaagacgagc 26529753 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 | ||||||||| |||||||| ||||||||||||||||| | ||| | ||| ||||||||| Sbjct: 26529754 atgccgccctgcggccccgacggctggcagtcgacggtgttgatgtcgtggtggcactgc 26529813 Query: 646 tggaaggggag 656 ||||||||| Sbjct: 26529814 gcgaaggggag 26529824 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 26528204 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 26528263 Query: 506 gcagcaaatggaacatctgt 525 | |||| |||||||||||| Sbjct: 26528264 gaagcagctggaacatctgt 26528283
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 526 gagaacttgagggggtgctcgccggggccggtggtgatggtgccggagacgaagacgagg 585 ||||||||||||||||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 78561 gagaacttgagggggtgctcgtcggggccggtgcggagggatccggagacgaagacgagc 78620 Query: 586 acgccgccctggggccccgagggctggcagtcgacggtatcgatcttgtgctggcactgc 645 | ||||||||| |||||||| ||||||||||||||||| | ||| | ||| ||||||||| Sbjct: 78621 atgccgccctgcggccccgacggctggcagtcgacggtgttgatgtcgtggtggcactgc 78680 Query: 646 tggaaggggag 656 ||||||||| Sbjct: 78681 gcgaaggggag 78691 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 446 ttccttaaccatagttcaggcggaacatgtcattctgcacgtagaagctccctccagctg 505 ||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||| | Sbjct: 77071 ttccttaaccatagttcagacggaacatgtcgttctgcacatagaagttgcctccagcgg 77130 Query: 506 gcagcaaatggaacatctgt 525 | |||| |||||||||||| Sbjct: 77131 gaagcagctggaacatctgt 77150
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 21 tatatgaacgtatatatgaagatatactcgttcaaatttacaccatccactagagatgct 80 ||||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 62667 tatatgaacgtgtatatcttcatatacacgttcaaatatacaccatccactagagatgct 62726 Query: 81 ct 82 || Sbjct: 62727 ct 62728 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 59 tacaccatccactagagatgctctta 84 |||||||||||||||||||||||||| Sbjct: 61757 tacaccatccactagagatgctctta 61732 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 18 gtatatatgaacgtatatatgaagatatactcgttca 54 |||||| ||||||| ||||||||||||||| |||||| Sbjct: 62707 gtatatttgaacgtgtatatgaagatatacacgttca 62671
>gb|AC138472.3| Homo sapiens chromosome 19 clone CTC-419E6, complete sequence Length = 126238 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||||||| ||||| Sbjct: 89342 aacgtatatatgaacgtatatatgaacatata 89373 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 89330 aacgtatatatgaacgtatatatgaa 89355 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 89318 aacgtatatatgaacgtatatatgaa 89343 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 88952 aacgtatatatgaacgtatatatgaa 88977 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 88940 aacgtatatatgaacgtatatatgaa 88965 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 89372 tatatatgaacgtatatatgaacatata 89399 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 17 cgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||| Sbjct: 89060 cgtatatatgaacgtatatatgaa 89083 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 88908 tatatatgaacgtatatatgaacatata 88935 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 89200 aacgtatatatgaacgtatatat 89222 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 89018 aacgtatatatgaacgtatatat 89040 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 88964 aacgtatatatgaacgtatatat 88986 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 89310 tatatatgaacgtatatatgaa 89331 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 89192 tatatatgaacgtatatatgaa 89213 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 89036 tatatatgaacgtatatatgaa 89057 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 89010 tatatatgaacgtatatatgaa 89031 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 88932 tatatatgaacgtatatatgaa 88953 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaa 40 ||||||||||||||| |||||||||| Sbjct: 88916 aacgtatatatgaacatatatatgaa 88941
>gb|AC073898.1|AC073898 Homo sapiens chromosome 19 BAC BC311202 (CIT-HSPC_419E6), complete sequence Length = 125428 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||||||| ||||| Sbjct: 36897 aacgtatatatgaacgtatatatgaacatata 36866 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 37299 aacgtatatatgaacgtatatatgaa 37274 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 37287 aacgtatatatgaacgtatatatgaa 37262 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 36921 aacgtatatatgaacgtatatatgaa 36896 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||||| Sbjct: 36909 aacgtatatatgaacgtatatatgaa 36884 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 37331 tatatatgaacgtatatatgaacatata 37304 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 17 cgtatatatgaacgtatatatgaa 40 |||||||||||||||||||||||| Sbjct: 37179 cgtatatatgaacgtatatatgaa 37156 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 36867 tatatatgaacgtatatatgaacatata 36840 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 37275 aacgtatatatgaacgtatatat 37253 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 37221 aacgtatatatgaacgtatatat 37199 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 37039 aacgtatatatgaacgtatatat 37017 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatatgaa 40 ||||||||||||||| |||||||||| Sbjct: 37323 aacgtatatatgaacatatatatgaa 37298 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 37307 tatatatgaacgtatatatgaa 37286 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 37229 tatatatgaacgtatatatgaa 37208 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 37203 tatatatgaacgtatatatgaa 37182 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 37047 tatatatgaacgtatatatgaa 37026 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 36929 tatatatgaacgtatatatgaa 36908
>dbj|AP001709.1| Homo sapiens genomic DNA, chromosome 21q, section 53/105 Length = 340000 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 64686 tatatatgaacgtatatatgaatatata 64713 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||| ||||||||||| ||||| Sbjct: 64772 tatatatgaatgtatatatgaatatata 64799 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaagatata 46 ||||||| |||||| ||||||||||| ||||| Sbjct: 64744 aacgtatgtatgaatgtatatatgaatatata 64775 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||||||| |||||| ||||| Sbjct: 64712 tatatatgaacgtatgtatgaatatata 64739
>dbj|AP000243.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:B335C24, complete sequence Length = 96174 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 78644 tatatatgaacgtatatatgaatatata 78671 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||| ||||||||||| ||||| Sbjct: 78730 tatatatgaatgtatatatgaatatata 78757 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaagatata 46 ||||||| |||||| ||||||||||| ||||| Sbjct: 78702 aacgtatgtatgaatgtatatatgaatatata 78733 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||||||| |||||| ||||| Sbjct: 78670 tatatatgaacgtatgtatgaatatata 78697
>dbj|AP000203.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 1/12, complete sequence Length = 100000 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||||||||||||||| ||||| Sbjct: 99674 tatatatgaacgtatatatgaatatata 99701 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||| ||||||||||| ||||| Sbjct: 99760 tatatatgaatgtatatatgaatatata 99787 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 15 aacgtatatatgaacgtatatatgaagatata 46 ||||||| |||||| ||||||||||| ||||| Sbjct: 99732 aacgtatgtatgaatgtatatatgaatatata 99763 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||||||| |||||| ||||| Sbjct: 99700 tatatatgaacgtatgtatgaatatata 99727
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 aacgtatatatgaacgtatatat 37 ||||||||||||||||||||||| Sbjct: 151710 aacgtatatatgaacgtatatat 151688
>gb|AY106921.1| Zea mays PCO069699 mRNA sequence Length = 785 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 569 cggagacgaagacgaggacgccg 591 ||||||||||||||||||||||| Sbjct: 598 cggagacgaagacgaggacgccg 576
>ref|NM_190845.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 441 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 457 tagttcaggcggaacatgtcattctgcacgtagaagct 494 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 434 tagttgagccggaatatgtcattctgcacgaagaagct 397
>gb|AY705500.1| Coffea canephora x Coffea congensis microsatellite CofEST-SSR05 sequence Length = 733 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 627 gatcttgtgctggcactgctggaaggggag 656 ||||| ||| |||||||||||||||||||| Sbjct: 305 gatctggtggtggcactgctggaaggggag 276
>gb|AC122392.3| Mus musculus BAC clone RP24-81I14 from chromosome 16, complete sequence Length = 195550 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaagatgat 300 |||||| ||||||||||||||||||| Sbjct: 115820 atggaacacacaaaacaaaagatgat 115845
>emb|AL355572.13| Human DNA sequence from clone RP11-366I22 on chromosome 13, complete sequence Length = 81324 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 cgtatatatgaacgtatatatgaagatata 46 ||||||||||||| |||||||||| ||||| Sbjct: 77471 cgtatatatgaacatatatatgaacatata 77500 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 77485 tatatatgaacatatatatgaacatata 77512
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA sequence Length = 1225 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Minus Query: 53 caaatttacaccatccactagagatgctct 82 ||||||||||| | |||||||||||||||| Sbjct: 1092 caaatttacacaagccactagagatgctct 1063
>emb|CR847979.6| Zebrafish DNA sequence from clone CH211-195H14 in linkage group 15, complete sequence Length = 117096 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 acatggaaaacacaaaacaaaa 294 |||||||||||||||||||||| Sbjct: 47906 acatggaaaacacaaaacaaaa 47885
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 gccggtggtgatggtgccggag 573 |||||||||||||||||||||| Sbjct: 88027 gccggtggtgatggtgccggag 88048
>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159445 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaa 40 |||||||||||||||||||||| Sbjct: 144106 tatatatgaacgtatatatgaa 144127
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 457 tagttcaggcggaacatgtcattctgcacgtagaagct 494 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 33442288 tagttgagccggaatatgtcattctgcacgaagaagct 33442251
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 tatgaagatatactcgttcaaa 56 |||||||||||||||||||||| Sbjct: 579320 tatgaagatatactcgttcaaa 579341
>emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in linkage group 1, complete sequence Length = 167871 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 atatatgaacgtatatatgaagatat 45 |||||||||||||||| ||||||||| Sbjct: 64167 atatatgaacgtatatgtgaagatat 64142
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 457 tagttcaggcggaacatgtcattctgcacgtagaagct 494 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 118454 tagttgagccggaatatgtcattctgcacgaagaagct 118417
>dbj|AK098941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046E12, full insert sequence Length = 729 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 457 tagttcaggcggaacatgtcattctgcacgtagaagct 494 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 510 tagttgagccggaatatgtcattctgcacgaagaagct 473
>dbj|AK073030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D17, full insert sequence Length = 754 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 457 tagttcaggcggaacatgtcattctgcacgtagaagct 494 ||||| || ||||| ||||||||||||||| ||||||| Sbjct: 515 tagttgagccggaatatgtcattctgcacgaagaagct 478
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 584 ggacgccgccctggggccccga 605 |||||||||||||||||||||| Sbjct: 2162280 ggacgccgccctggggccccga 2162259
>gb|AY857192.1| Uncultured bacterium clone xyl1 xylanase gene, partial cds Length = 432 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 552 gccggtggtgatggtgccggag 573 |||||||||||||||||||||| Sbjct: 414 gccggtggtgatggtgccggag 393
>gb|M64553.1|STMXLNC Streptomyces lividans xylanase C (xlnC) gene, complete cds Length = 1008 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 552 gccggtggtgatggtgccggag 573 |||||||||||||||||||||| Sbjct: 816 gccggtggtgatggtgccggag 795
>ref|XM_641095.1| Dictyostelium discoideum hypothetical protein (DDB0190468), partial mRNA Length = 1563 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tgaaaacaatccaaattcgtt 136 ||||||||||||||||||||| Sbjct: 1359 tgaaaacaatccaaattcgtt 1379
>gb|AC122233.4| Mus musculus BAC clone RP23-137D14 from 16, complete sequence Length = 203964 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 agttctgaaaacaatccaaat 131 ||||||||||||||||||||| Sbjct: 201732 agttctgaaaacaatccaaat 201752
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 563 tggtgccggagacgaagacga 583 ||||||||||||||||||||| Sbjct: 957882 tggtgccggagacgaagacga 957902
>emb|X81045.1|SSXLNG Streptomyces sp. xln gene for xylanase Length = 1080 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 553 ccggtggtgatggtgccggag 573 ||||||||||||||||||||| Sbjct: 682 ccggtggtgatggtgccggag 662
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 268 acaatacatggaaaacacaaaacaa 292 |||||| |||||||||||||||||| Sbjct: 4065857 acaatagatggaaaacacaaaacaa 4065881
>gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosome 16, complete sequence Length = 212505 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 agttctgaaaacaatccaaat 131 ||||||||||||||||||||| Sbjct: 78109 agttctgaaaacaatccaaat 78129
>gb|AC146266.4| Pan troglodytes BAC clone RP43-30L11 from chromosome 7, complete sequence Length = 187603 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 aattcgttgagagggaagaaa 149 ||||||||||||||||||||| Sbjct: 13018 aattcgttgagagggaagaaa 13038
>gb|AC022173.7|AC022173 Homo sapiens chromosome 7 clone RP11-29B3, complete sequence Length = 155136 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 aattcgttgagagggaagaaa 149 ||||||||||||||||||||| Sbjct: 107883 aattcgttgagagggaagaaa 107863
>dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT10C05, TM0062, complete sequence Length = 81367 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 aaaacacaaaacaaaagatga 299 ||||||||||||||||||||| Sbjct: 73329 aaaacacaaaacaaaagatga 73309
>dbj|AP001207.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1562D12 Length = 153936 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 atatgaacgtatatatgaagatata 46 ||||| ||||||||||||||||||| Sbjct: 58811 atatgtacgtatatatgaagatata 58787
>gb|AC115067.7| Mus musculus chromosome 5, clone RP24-404B4, complete sequence Length = 163303 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 29941 atggaaaacacaaaacaaaa 29960
>ref|XM_639826.1| Dictyostelium discoideum hypothetical protein (DDB0168938), partial mRNA Length = 2283 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ccattttttgcaataaattg 344 |||||||||||||||||||| Sbjct: 584 ccattttttgcaataaattg 565
>ref|XM_470684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggagacgaagacgaggacgc 589 |||||||||||||||||||| Sbjct: 378 ggagacgaagacgaggacgc 359
>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence Length = 191698 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 49984 atggaaaacacaaaacaaaa 49965
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 554 cggtggtgatggtgccggagacgaagacgagg 585 ||||| ||||| |||||||||||| ||||||| Sbjct: 48944 cggtgttgatgatgccggagacgacgacgagg 48975
>gb|AY573924.1| Drosophila mauritiana hybrid male rescue (Hmr) gene, complete sequence Length = 6642 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 84 atggaaaacacaaaacaaaa 103
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 ggagacgaagacgaggacgc 589 |||||||||||||||||||| Sbjct: 14530103 ggagacgaagacgaggacgc 14530122 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 ggtgccggagacgaagacgaggacgccg 591 ||||||||||| ||||| |||||||||| Sbjct: 5292552 ggtgccggagaagaagaggaggacgccg 5292525
>gb|AC107850.11| Mus musculus chromosome 17, clone RP23-450G2, complete sequence Length = 216615 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 97826 tatatatgaacctatatatgaatatata 97853 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 97804 tatatatgaacctatatatgaatatata 97831 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 97716 tatatatgaacctatatatgaacatata 97743
>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence Length = 154344 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 12487 tatatatgaacatatatatgaacatata 12514
>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete sequence Length = 166990 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ttcattgtttcaacataaat 409 |||||||||||||||||||| Sbjct: 119217 ttcattgtttcaacataaat 119236
>emb|Z82284.1|CET27E7 Caenorhabditis elegans Cosmid T27E7, complete sequence Length = 32960 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 ttttgcaataaattgcacaa 349 |||||||||||||||||||| Sbjct: 24694 ttttgcaataaattgcacaa 24675
>gb|AC126278.4| Mus musculus BAC clone RP23-161M1 from 7, complete sequence Length = 201387 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttgagagggaagaaactctt 154 |||||||||||||||||||| Sbjct: 149338 ttgagagggaagaaactctt 149319
>emb|CT010368.1| Mus musculus full open reading frame cDNA clone RZPDo836C0153D for gene Cd7, CD7 antigen; complete cds, incl. stopcodon Length = 633 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 294 aagctccctccagctggcag 313
>ref|XM_845608.1| PREDICTED: Canis familiaris similar to ADP-ribosylation factor binding protein GGA2 (Golgi-localized, gamma ear-containing, ARF-binding protein 2) (Gamma-adaptin related protein 2) (VHS domain and ear domain of gamma-adaptin) (Vear) (LOC608555), mRNA Length = 2805 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 acaatacatggaaaacacaaaaca 291 ||||||||||||||| |||||||| Sbjct: 2169 acaatacatggaaaaaacaaaaca 2146
>ref|XM_720508.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05179) partial mRNA Length = 2250 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 atattcattgtttcaacata 406 |||||||||||||||||||| Sbjct: 325 atattcattgtttcaacata 344
>gb|BC024376.1| Mus musculus CD7 antigen, mRNA (cDNA clone MGC:36025 IMAGE:4985794), complete cds Length = 1023 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 348 aagctccctccagctggcag 367
>ref|XM_672962.1| Plasmodium berghei strain ANKA NADPH-cytochrome p450 reductase, (PB000937.01.0) partial mRNA Length = 2055 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 atattcattgtttcaacata 406 |||||||||||||||||||| Sbjct: 124 atattcattgtttcaacata 143
>gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome 14, complete sequence Length = 214128 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 20 atatatgaacgtatatatgaagatatac 47 ||||||| ||||||||||||| |||||| Sbjct: 24661 atatatgcacgtatatatgaatatatac 24634
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 ggtgccggagacgaagacgaggacgccg 591 ||||||||||| ||||| |||||||||| Sbjct: 115954 ggtgccggagaagaagaggaggacgccg 115927
>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete sequence Length = 70823 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tccctccagctggcagcaaa 513 |||||||||||||||||||| Sbjct: 12623 tccctccagctggcagcaaa 12604
>emb|AL138844.24| Human DNA sequence from clone RP4-776C18 on chromosome 1 Contains part of the gene for a novel protein containing a tubulin-tyrosine ligase family domain (FLJ44842, FLJ23033 and FLJ36855), complete sequence Length = 60592 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 25103 tatatatgaacatatatatgaacatata 25130 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 25091 tatatatgaacatatatatgaacatata 25118
>gb|AY337516.1| Homo sapiens glutamate decarboxylase 1 (brain, 67kDa) (GAD1) gene, complete cds Length = 47930 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 45032 atggaaaacacaaaacaaaa 45013
>emb|AL050310.6|HSJ842K24 Human DNA sequence from clone RP5-842K24 on chromosome Xq25-26.3 Contains the 3' end of the MBNL3 gene for muscleblind-like 3 (Drosophila) and a novel gene, complete sequence Length = 109637 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 |||||||||| ||||||||||| ||||| Sbjct: 64024 tatatatgaatgtatatatgaatatata 63997
>gb|AY227530.1| Spermophilus lateralis isolate Sla1 12S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 828 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 atgcgaaagtaaacttaaatcgtc 182 |||||||||||| ||||||||||| Sbjct: 362 atgcgaaagtaatcttaaatcgtc 385
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggagacgaagacgaggacgc 589 |||||||||||||||||||| Sbjct: 127608 ggagacgaagacgaggacgc 127589
>gb|AC008114.25| Homo sapiens 12 BAC RP11-502N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 126503 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108963 tatatatgaacatatatatgaatatata 108936 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108941 tatatatgaacatatatatgaatatata 108914 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108919 tatatatgaacatatatatgaatatata 108892 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108887 tatatatgaacatatatatgaatatata 108860 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108855 tatatatgaacatatatatgaatatata 108828 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 108833 tatatatgaacatatatatgaatatata 108806
>emb|AL627326.16| Mouse DNA sequence from clone RP23-20A22 on chromosome 13 Contains the Plfr gene for proliferin related protein, the gene for novel protein 1600017N11Rik similar to prolactin, the Prlpm gene for prolactin-like protein M and the gene for a novel protein similar to proliferin, complete sequence Length = 184504 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 atacatggaaaacacaaaacaaaa 294 ||||||||||||||||||| |||| Sbjct: 94459 atacatggaaaacacaaaaaaaaa 94436
>gb|AY568396.2| Drosophila simulans isolate DLWolfskill_7 Hmr gene, partial sequence Length = 5237 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 101 atggaaaacacaaaacaaaa 120
>gb|AY568395.2| Drosophila simulans isolate DLWolfskill_6 Hmr gene, partial sequence Length = 5237 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 101 atggaaaacacaaaacaaaa 120
>gb|AY568394.2| Drosophila simulans isolate DLWolfskill_5 Hmr gene, partial sequence Length = 5220 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 102 atggaaaacacaaaacaaaa 121
>gb|AY568393.2| Drosophila simulans isolate DLWolfskill_4 Hmr gene, partial sequence Length = 5220 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 102 atggaaaacacaaaacaaaa 121
>gb|AY568392.2| Drosophila simulans isolate DLWolfskill_1 Hmr gene, partial sequence Length = 5220 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 102 atggaaaacacaaaacaaaa 121
>gb|AY568391.2| Drosophila simulans isolate DLp92 Hmr gene, partial sequence Length = 5239 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 102 atggaaaacacaaaacaaaa 121
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 cggagacgaagacgaggacg 588 |||||||||||||||||||| Sbjct: 4198962 cggagacgaagacgaggacg 4198943
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 tgatggtgccggagacgaag 579 |||||||||||||||||||| Sbjct: 1666822 tgatggtgccggagacgaag 1666841
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 acaaaacaaacccagagatg 202 |||||||||||||||||||| Sbjct: 6919 acaaaacaaacccagagatg 6900
>dbj|AK136444.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030224E03 product:CD7 antigen, full insert sequence Length = 989 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 361 aagctccctccagctggcag 380
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence Length = 181991 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 640 cactgctggaaggggagaga 659 |||||||||||||||||||| Sbjct: 50900 cactgctggaaggggagaga 50881
>dbj|AK154339.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630021M03 product:CD7 antigen, full insert sequence Length = 990 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 362 aagctccctccagctggcag 381
>gb|AY260054.1| Drosophila sechellia Hmr (Hmr) gene, complete cds Length = 5153 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 17 atggaaaacacaaaacaaaa 36
>gb|AY260053.1| Drosophila simulans Hmr (Hmr) gene, complete cds Length = 5374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 135 atggaaaacacaaaacaaaa 154
>gb|AY260052.1| Drosophila mauritiana Hmr (Hmr) gene, complete cds Length = 5468 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 128 atggaaaacacaaaacaaaa 147
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 ggagacgaagacgaggacgc 589 |||||||||||||||||||| Sbjct: 14525074 ggagacgaagacgaggacgc 14525093 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 ggtgccggagacgaagacgaggacgccg 591 ||||||||||| ||||| |||||||||| Sbjct: 5291767 ggtgccggagaagaagaggaggacgccg 5291740
>gb|AC084866.5| Homo sapiens BAC clone RP11-6E9 from 4, complete sequence Length = 196852 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 attttttgcaataaattgca 346 |||||||||||||||||||| Sbjct: 124653 attttttgcaataaattgca 124672
>gb|AC007405.6| Homo sapiens BAC clone RP11-570C16 from 2, complete sequence Length = 193212 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 atggaaaacacaaaacaaaa 294 |||||||||||||||||||| Sbjct: 29700 atggaaaacacaaaacaaaa 29719
>gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157892 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 aaacaaacaaagtctgcagcatca 379 |||||||||||| ||||||||||| Sbjct: 84391 aaacaaacaaaggctgcagcatca 84414
>dbj|D31956.2| Mus musculus mCD7 gene for CD7 antigen, complete cds Length = 2883 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 1496 aagctccctccagctggcag 1515
>gb|AC010887.11| Homo sapiens BAC clone RP11-395A12 from 2, complete sequence Length = 102117 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ctgtgagttctgaaaacaat 125 |||||||||||||||||||| Sbjct: 60519 ctgtgagttctgaaaacaat 60538
>gb|AC108150.4| Homo sapiens BAC clone RP11-492E24 from 2, complete sequence Length = 75818 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ttttttgcaataaattgcac 347 |||||||||||||||||||| Sbjct: 23099 ttttttgcaataaattgcac 23080
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ccattttttgcaataaattg 344 |||||||||||||||||||| Sbjct: 168956 ccattttttgcaataaattg 168937
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 ggagacgaagacgaggacgc 589 |||||||||||||||||||| Sbjct: 11282 ggagacgaagacgaggacgc 11263
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 564 ggtgccggagacgaagacgaggacgccg 591 ||||||||||| ||||| |||||||||| Sbjct: 13715 ggtgccggagaagaagaggaggacgccg 13688
>ref|XM_580181.1| PREDICTED: Rattus norvegicus LOC501264 (LOC501264), mRNA Length = 731 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gtctggccattttttgcaat 338 |||||||||||||||||||| Sbjct: 118 gtctggccattttttgcaat 137
>gb|AC139849.5| Mus musculus BAC clone RP23-84M17 from chromosome 7, complete sequence Length = 189942 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caagttggcaaacaaacaaa 366 |||||||||||||||||||| Sbjct: 18786 caagttggcaaacaaacaaa 18805
>gb|AC155812.2| Mus musculus BAC clone RP24-139G23 from 12, complete sequence Length = 153018 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 gaaaacacaaaacaaaagatgatc 301 ||||||||||||||||| |||||| Sbjct: 98310 gaaaacacaaaacaaaacatgatc 98287
>emb|CR848004.8| Zebrafish DNA sequence from clone CH211-237I9 in linkage group 10, complete sequence Length = 91696 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 catggaaaacacaaaacaaa 293 |||||||||||||||||||| Sbjct: 35244 catggaaaacacaaaacaaa 35225
>dbj|D00906.1|NVMV2 Nicotiana velutina mosaic virus gene for capsid protein and membrane proteins, complete cds Length = 2325 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctgatcaagttctttgctgc 431 |||||||||||||||||||| Sbjct: 250 ctgatcaagttctttgctgc 231
>emb|CT571268.7| Mouse DNA sequence from clone RP23-275M21 on chromosome 12, complete sequence Length = 178441 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 gaaaacacaaaacaaaagatgatc 301 ||||||||||||||||| |||||| Sbjct: 107415 gaaaacacaaaacaaaacatgatc 107438
>gb|AC154677.2| Mus musculus BAC clone RP24-299I4 from chromosome 14, complete sequence Length = 149259 Score = 40.1 bits (20), Expect = 9.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 627 gatcttgtgctggcactg-ctggaaggg 653 |||||||||||||||||| ||||||||| Sbjct: 81869 gatcttgtgctggcactgactggaaggg 81842
>emb|AL672162.6| Mouse DNA sequence from clone RP23-100C4 on chromosome 2, complete sequence Length = 136483 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 278 gaaaacacaaaacaaaagatgatctggt 305 ||||||||||||||||| |||| ||||| Sbjct: 56053 gaaaacacaaaacaaaaaatgaactggt 56080
>ref|NM_009854.1| Mus musculus CD7 antigen (Cd7), mRNA Length = 978 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 347 aagctccctccagctggcag 366
>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete sequence Length = 200375 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 20 atatatgaacgtatatatgaagatatac 47 ||||||| ||||||||||||| |||||| Sbjct: 18850 atatatgcacgtatatatgaatatatac 18877
>emb|AL928589.11| Mouse DNA sequence from clone RP23-350C1 on chromosome 2, complete sequence Length = 209053 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gaaaacacaaaacaaaagat 297 |||||||||||||||||||| Sbjct: 57761 gaaaacacaaaacaaaagat 57780
>emb|CT025668.10| Mouse DNA sequence from clone RP24-370M11 on chromosome 17, complete sequence Length = 230212 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 84717 tatatatgaacctatatatgaatatata 84744 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 84695 tatatatgaacctatatatgaatatata 84722 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 84607 tatatatgaacctatatatgaacatata 84634
>emb|AL928912.10| Mouse DNA sequence from clone RP23-209L8 on chromosome 2, complete sequence Length = 136821 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 19 tatatatgaacgtatatatgaagatata 46 ||||||||||| |||||||||| ||||| Sbjct: 116805 tatatatgaacatatatatgaacatata 116832
>gb|U23462.1|MMU23462 Mus musculus CD7 antigen (Cd7) gene, complete cds Length = 4453 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 2518 aagctccctccagctggcag 2537
>gb|AC171202.1| Mus musculus BAC clone RP24-288C12 from chromosome 16, complete sequence Length = 194527 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 catggaaaacacaaaacaaa 293 |||||||||||||||||||| Sbjct: 56404 catggaaaacacaaaacaaa 56423
>emb|AL662887.13| Mouse DNA sequence from clone RP23-400P17 on chromosome 11, complete sequence Length = 198011 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 71271 aagctccctccagctggcag 71252
>emb|AL671335.12| Mouse DNA sequence from clone RP23-130J1 on chromosome X, complete sequence Length = 175336 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 caagttggcaaacaaacaaa 366 |||||||||||||||||||| Sbjct: 63743 caagttggcaaacaaacaaa 63762
>emb|AL606922.5| Mouse DNA sequence from clone RP23-149E24 on chromosome 4, complete sequence Length = 191957 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 gtctggccattttttgcaat 338 |||||||||||||||||||| Sbjct: 15864 gtctggccattttttgcaat 15845
>dbj|D10329.1|MUSCD7 Mus musculus mRNA for CD7, complete cds Length = 978 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 aagctccctccagctggcag 509 |||||||||||||||||||| Sbjct: 347 aagctccctccagctggcag 366
>emb|AL807250.9| Mouse DNA sequence from clone RP23-99K18 on chromosome X, complete sequence Length = 141025 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 gtatatatgaacgtatatatgaag 41 ||||||||||| |||||||||||| Sbjct: 31792 gtatatatgaatgtatatatgaag 31769
>emb|AL691436.7| Mouse DNA sequence from clone RP23-357M4 on chromosome 3, complete sequence Length = 66628 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 caagttggcaaacaaacaaa 366 |||||||||||||||||||| Sbjct: 52432 caagttggcaaacaaacaaa 52413 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,704,918 Number of Sequences: 3902068 Number of extensions: 8704918 Number of successful extensions: 161275 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 160433 Number of HSP's gapped (non-prelim): 841 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
