ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd13j05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 1183 bits (597), Expect = 0.0 Identities = 607/609 (99%), Gaps = 1/609 (0%) Strand = Plus / Minus Query: 1 cccaaaatacaacgacaatatctgtaggtaaagctgcgggtccgccatggctgagcagct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1717 cccaaaatacaacgacaatatctgtaggtaaagctgcgggtccgccatggctgagcagct 1658 Query: 61 acacaattaacaacacacgtcgatcaacaccaacgcacgaacaagtaaaggcaaaagcga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1657 acacaattaacaacacacgtcgatcaacaccaacgcacgaacaagtaaaggcaaaagcga 1598 Query: 121 caggaactgaagtaagaacatgcacgaacggattaagcgtcttatttttggatgtacttt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1597 caggaactgaagtaagaacatgcacgaacggattaagcgtcttatttttggatgtacttt 1538 Query: 181 ggaagcctcctcctctcctccacggtggcacggacgatccttcagacgttgatgggcagg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1537 ggaagcctcctcctctcctccacggtggcacggacgatccttcagacgttgatgggcagg 1478 Query: 241 ggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttctggctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1477 ggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttctggctg 1418 Query: 301 atgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccggtgagg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1417 atgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccggtgagg 1358 Query: 361 tacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 tacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttg 1298 Query: 421 atcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 atcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcc 1238 Query: 481 cgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaacaccgtggcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 cgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaacaccgtggcc 1178 Query: 541 tcgctctcggcctcgccggggccggcggtaagggccgtggtccacgagcacggcgcgcag 600 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 1177 tcgctctcggcctcgccggggccggcggtcaggg-cgtggtccacgagcacggcgcgcag 1119 Query: 601 cttctgcat 609 ||||||||| Sbjct: 1118 cttctgcat 1110
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 412 bits (208), Expect = e-112 Identities = 302/332 (90%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 2045 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2044 cttgccctggctgatgccgatgaacaccttgttgcactcctcgccgggggacttgagctt 1985 Query: 348 ctcgccggtgaggtacacgcagccgagct-cctcgcggacgaagcggtacagcgggaacg 406 ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 1984 ctcgccggtgaggtacacgcagccgagctccctcgcggacgaagcggtacacggggaacg 1925 Query: 407 acctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcggg 466 ||| ||||||||||||| |||||| ||| ||||| ||||||||||| | ||||||||||| Sbjct: 1924 accggctctccttgatccggttggcgatcggcgcggtgccgttctccacggccacgcggg 1865 Query: 467 cggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgg 526 |||||||||||||||| ||||| ||||| |||||||||||| |||||||| ||||||||| Sbjct: 1864 cggcctcgatctcccggggcagagccgagcgcagctcctccccgaacttggtgatcttgg 1805 Query: 527 agaacaccgtggcctcgctctcggcctcgccg 558 ||||||| | || ||| | |||||| |||||| Sbjct: 1804 agaacacggagggctcccgctcggcgtcgccg 1773 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 584 acgagcacggcgcgcagcttctgcat 609 |||||||||||||| ||||||||||| Sbjct: 1754 acgagcacggcgcggagcttctgcat 1729
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2189 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2130 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2129 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2070 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2069 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2010 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 2009 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 1950 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 1949 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 1890 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 1889 gaacacggaggcctcgggctcggcgtcgccg 1859
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Plus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24992256 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 24992315 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 24992316 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 24992375 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24992376 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 24992435 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 24992436 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 24992495 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 24992496 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 24992555 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 24992556 gaacacggaggcctcgggctcggcgtcgccg 24992586 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 25004085 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 25004144 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 25004145 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 25004204 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 25004205 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 25004264 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 25004265 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 25004323 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 25025228 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 25025284 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 25011629 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 25011688 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 25011689 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 25011748 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 398 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 25011749 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 25011796 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 370 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 429 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 25025363 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 25025422 Query: 430 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 489 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 25025423 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 25025482 Query: 490 gccgaccgcagctcctcctcgaact 514 | || ||||||||||||||||||| Sbjct: 25025483 gtcgcgcgcagctcctcctcgaact 25025507
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Plus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5244 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 5303 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 5304 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 5363 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5364 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 5423 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 5424 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 5483 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 5484 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 5543 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 5544 gaacacggaggcctcgggctcggcgtcgccg 5574 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 17073 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 17132 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 17133 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 17192 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 17193 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 17252 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 17253 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 17311 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 38216 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 38272 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 24617 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 24676 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 24677 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 24736 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 398 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 24737 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 24784 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 370 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 429 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 38351 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 38410 Query: 430 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 489 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 38411 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 38470 Query: 490 gccgaccgcagctcctcctcgaact 514 | || ||||||||||||||||||| Sbjct: 38471 gtcgcgcgcagctcctcctcgaact 38495
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Plus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 153539 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 153598 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 153599 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 153658 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 153659 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 153718 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 153719 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 153778 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 153779 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 153838 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 153839 gaacacggaggcctcgggctcggcgtcgccg 153869 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 165368 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 165427 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 165428 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 165487 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 165488 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 165547 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 165548 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 165606
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2191 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 2132 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 2131 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 2072 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2071 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 2012 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 2011 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 1952 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 1951 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 1892 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 1891 gaacacggaggcctcgggctcggcgtcgccg 1861
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 363 bits (183), Expect = 4e-97 Identities = 294/331 (88%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 983 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 924 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 923 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 864 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 863 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 804 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 803 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 744 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 743 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 684 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 683 gaacacggaggcctcgggctcggcgtcgccg 653
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 355 bits (179), Expect = 1e-94 Identities = 293/331 (88%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1218 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 1159 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||| ||||||||||| ||||| Sbjct: 1158 cttgccctggctgatgccgaggaacaccttgttgcactccccgccgggggacttgagctt 1099 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1098 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 1039 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || |||||||| ||| ||| |||||||| Sbjct: 1038 ccggctctcgacgatccggttggcgacgggggcggtgccgttggcgacggcgacgcgggc 979 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 978 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 919 Query: 528 gaacaccgtggcctcgctctcggcctcgccg 558 |||||| | ||||||| |||||| |||||| Sbjct: 918 gaacacggaggcctcgggctcggcgtcgccg 888
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 341 bits (172), Expect = 2e-90 Identities = 281/316 (88%), Gaps = 1/316 (0%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4066 gttgatgggaaggggctcgccgttccactccttgaggcagtcgagcatggggtcgatgag 4007 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| Sbjct: 4006 cttgccctggctgatgccgaggaacaccttgttgcactcctcgccgggggacttgagctt 3947 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3946 ctcgccggtgaggaatacgcagccgagctcctcgcggacgaagcggtagagcgggaacga 3887 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || |||||| |||| |||||| || ||| || ||| |||| ||| ||| |||||||| Sbjct: 3886 ccggctctcgacgatccggttggcgacgggggcggtg-cgttggcgacggcgacgcgggc 3828 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 ||||||||||||||| ||||| || || || |||||||||||||||||| |||||||||| Sbjct: 3827 ggcctcgatctcccggggcagcgcagagcggagctcctcctcgaacttggtgatcttgga 3768 Query: 528 gaacaccgtggcctcg 543 |||||| | ||||||| Sbjct: 3767 gaacacggaggcctcg 3752 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 584 acgagcacggcgcgcagcttctgcat 609 |||||||||||||| ||||||||||| Sbjct: 3717 acgagcacggcgcggagcttctgcat 3692
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2118 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2059 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2058 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1999 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1998 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1939 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 1938 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1879 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1878 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1819 Query: 531 cac 533 ||| Sbjct: 1818 cac 1816
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2010 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 1951 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1950 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1891 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1890 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 1831 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 1830 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1771 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1770 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1711 Query: 531 cac 533 ||| Sbjct: 1710 cac 1708
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 98032 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 98091 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 98092 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 98151 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98152 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 98211 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 98212 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 98271 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 98272 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 98331 Query: 531 cac 533 ||| Sbjct: 98332 cac 98334 Score = 107 bits (54), Expect = 4e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 118218 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 118277 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 118278 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 118337 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 118338 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 118397 Query: 411 gc 412 || Sbjct: 118398 gc 118399
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 25880622 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 25880681 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 25880682 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 25880741 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25880742 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 25880801 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 25880802 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 25880861 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 25880862 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 25880921 Query: 531 cac 533 ||| Sbjct: 25880922 cac 25880924 Score = 107 bits (54), Expect = 4e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 25900808 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 25900867 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 25900868 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 25900927 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 25900928 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 25900987 Query: 411 gc 412 || Sbjct: 25900988 gc 25900989
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2210 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 2151 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 2150 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 2091 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2090 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 2031 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 2030 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 1971 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 1970 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 1911 Query: 531 cac 533 ||| Sbjct: 1910 cac 1908
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 339 bits (171), Expect = 6e-90 Identities = 270/303 (89%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6884 gatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgatgagctt 6943 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||||| | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 6944 gcgctcgctgatggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 7003 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7004 tccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 7063 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| |||||| ||||||| |||||||| || || Sbjct: 7064 gctctccttgatcctgttggtgatcggcgcggtgccggtctcgaacgccacgcgcgccgc 7123 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| || ||||||||||||||| | ||||||||||||| Sbjct: 7124 ctccatctccctgggcagcgcctcgcggagctcctcctcgaacgcggtgatcttggagaa 7183 Query: 531 cac 533 ||| Sbjct: 7184 cac 7186 Score = 107 bits (54), Expect = 4e-20 Identities = 150/182 (82%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 27070 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 27129 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 27130 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 27189 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 27190 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 27249 Query: 411 gc 412 || Sbjct: 27250 gc 27251
>gb|AY106831.1| Zea mays PCO142079 mRNA sequence Length = 2299 Score = 299 bits (151), Expect = 6e-78 Identities = 265/303 (87%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1968 gatgggcaggggcttgccgtcccactccttgaggcagtcgagcatggggtcgatgagctt 1909 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | || ||||| | | ||||| |||||| |||| ||||||||||||||| |||||||| Sbjct: 1908 gccctcgctgagggccaggaacaccttgttgcactcctcgccgggggacttgagcttctc 1849 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 |||||| ||||||||| |||||| |||| ||||| |||||||||||||||| |||||| Sbjct: 1848 gccggtcaggtacacggcgccgaggtcctggcggatgaagcggtacagcgggtacgaccg 1789 Query: 411 gctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggc 470 ||||||||||||| ||||| ||| ||||| | |||| |||||||||||||||||||||| Sbjct: 1788 gctctccttgatcctgttggcgatcggcgcggcgccggtctcgaaggccacgcgggcggc 1729 Query: 471 ctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttggagaa 530 ||| ||||||| ||||| ||| |||||||||||||||||| |||||||||||||||| Sbjct: 1728 ctccatctccctgggcagcgcctcgcgcagctcctcctcgaacctgttgatcttggagaa 1669 Query: 531 cac 533 ||| Sbjct: 1668 cac 1666
>gb|AY103647.1| Zea mays PCO142084 mRNA sequence Length = 2598 Score = 248 bits (125), Expect = 2e-62 Identities = 263/309 (85%) Strand = Plus / Minus Query: 225 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 284 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 2215 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 2156 Query: 285 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 344 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 2155 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 2096 Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2095 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2036 Query: 405 cgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcg 464 ||||| ||| ||| |||| |||| | | ||| || ||||| | ||| |||||||| Sbjct: 2035 cgaccggctgtccgcgatccggttcgccacgggggcggtgccctcggcgaccgccacgcg 1976 Query: 465 ggcggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatctt 524 ||||||||| | |||| | ||||| ||| || ||||||||||||||| || ||||||| Sbjct: 1975 ggcggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatctt 1916 Query: 525 ggagaacac 533 ||||||||| Sbjct: 1915 ggagaacac 1907 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 576 cgtggtccacgagcacggcgcgcagcttctgcat 609 |||||||||| ||||||||||||||||||||||| Sbjct: 1871 cgtggtccaccagcacggcgcgcagcttctgcat 1838
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 234 bits (118), Expect = 3e-58 Identities = 260/306 (84%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 228 gttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgag 287 |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2216 gttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccacgag 2157 Query: 288 cttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagctt 347 |||| |||||||||||||| ||| |||||| |||| ||||||||||||||| ||| | Sbjct: 2156 cttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgagcct 2097 Query: 348 ctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2096 ctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaacga 2037 Query: 408 cctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggc 467 || ||| ||| |||| |||| | | ||| || ||||| | || | ||||||||||| Sbjct: 2036 ccggctgtccgcgatccggttcgccacgggggcggtgccctcggcg-acgccacgcgggc 1978 Query: 468 ggcctcgatctcccgcggcagggccgaccgcagctcctcctcgaacttgttgatcttgga 527 |||||| | |||| | ||||| ||| || ||||||||||||||| || |||||||||| Sbjct: 1977 ggcctccacctcctggggcagcaccgcgcggagctcctcctcgaacctggtgatcttgga 1918 Query: 528 gaacac 533 |||||| Sbjct: 1917 gaacac 1912 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 576 cgtggtccacgagcacggcgcgcagcttctgcat 609 |||||||||| ||||||||||||||||||||||| Sbjct: 1875 cgtggtccaccagcacggcgcgcagcttctgcat 1842
>gb|M95077.1|MZEORFR Zea mays putative phenylalanine ammonia lyase mRNA, partial cds Length = 190 Score = 216 bits (109), Expect = 6e-53 Identities = 163/181 (90%) Strand = Plus / Minus Query: 225 gacgttgatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgat 284 ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| | Sbjct: 181 gacgttgatgggcagcggcttgccgtcccactccttgaggcactcgagcatggggtccac 122 Query: 285 gagcttgttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcag 344 ||||||| |||||||||||||| ||| |||||| |||| ||||||||||||||| || Sbjct: 121 gagcttgccctggctgatgccgacgaacaccttgttgcactcctcgccgggggacttgag 62 Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 | |||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 cctctcgccggtcaggaacacgcagccgagctcctcgcgcacgaagcggtacagcgggaa 2 Query: 405 c 405 | Sbjct: 1 c 1
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 2117 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 2116 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 2058
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 2296 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 2237 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 2236 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 2177 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 2176 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 2117 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 2116 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 2058
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1537 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1478 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1477 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1418 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 1417 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 1358 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 1357 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 1299
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 125 bits (63), Expect = 2e-25 Identities = 195/239 (81%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 1253 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 1194 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 1193 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 1134 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 1133 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 1074 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 1073 tccttgatccggttggggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 1015
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 113 bits (57), Expect = 7e-22 Identities = 144/173 (83%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 2141 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 2082 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 2081 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 2022 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 2021 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 1969
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 113 bits (57), Expect = 7e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 122631 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 122690 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 122691 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 122750 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 122751 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 122803
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 113 bits (57), Expect = 7e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 65212 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 65271 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 65272 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 65331 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 65332 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 65384
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 113 bits (57), Expect = 7e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 20809407 ggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgccc 20809466 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| |||| ||| || |||||| || ||||||||||| ||| || |||||||||| Sbjct: 20809467 tggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgtcttctcgccg 20809526 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacga 407 |||||||| || ||||||||||||||| ||||| ||||| |||||| |||| Sbjct: 20809527 gtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggtacga 20809579 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaatacaacgacaatatct 23 |||||||||||||||||||| Sbjct: 7843191 aaaatacaacgacaatatct 7843172
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 109 bits (55), Expect = 1e-20 Identities = 194/239 (81%), Gaps = 1/239 (0%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||| ||| |||| ||||| ||||||||||| ||||||| ||||||||| ||||| | Sbjct: 4725 ggcagtggcgcgccattccattccttgaggcattcgagcagcgggtcgatgtgcttgcgc 4666 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 | | ||||| ||| || |||||| | ||||||||||| ||| || |||||||||| Sbjct: 4665 tcgttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctcgccg 4606 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 ||||||||| || ||||| ||||||||| ||||| ||||| |||||| |||| | || | Sbjct: 4605 gtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagcgggtacgagcggcac 4546 Query: 415 tccttgatcaggttggggatgggcgccgtgccgttctcgaaggccacgcgggcggcctc 473 ||||||||| |||| |||| | ||| ||||||||||||| ||| ||||||||||||| Sbjct: 4545 tccttgatccggtt-gggacgagcggggtgccgttctcgacggcggcgcgggcggcctc 4488
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 107 bits (54), Expect = 4e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2139 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2080 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2079 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2020 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2019 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 1960 Query: 411 gc 412 || Sbjct: 1959 gc 1958
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 107 bits (54), Expect = 4e-20 Identities = 150/182 (82%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 2264 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 2205 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| | ||| ||| ||| |||||| | ||||||||||| ||| || |||||| Sbjct: 2204 gccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgtcttctc 2145 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacct 410 ||||| | |||| | |||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 2144 cccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggtacgacct 2085 Query: 411 gc 412 || Sbjct: 2084 gc 2083
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 103 bits (52), Expect = 7e-19 Identities = 139/168 (82%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1116 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1057 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1056 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 997 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcggg 402 || |||||| || ||||| ||||||||| ||||| |||||||||||| Sbjct: 996 gtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcggg 949
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 101 bits (51), Expect = 3e-18 Identities = 162/199 (81%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgttc 294 ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| | Sbjct: 1562 ggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgatgtgcttgcgc 1503 Query: 295 tggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctcgccg 354 ||| ||||| | | || |||||| || ||||||||||||||| | |||||||| Sbjct: 1502 tggttgatggccacgagcaccttgttgagctcctcgccgggggacctggtcctctcgccg 1443 Query: 355 gtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaacgacctgctc 414 || |||||| || ||||| |||||||| ||||| |||||||||||| | |||| || | Sbjct: 1442 gtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcgggtaggaccggcac 1383 Query: 415 tccttgatcaggttgggga 433 ||| ||||| |||||||| Sbjct: 1382 tccctgatcctgttgggga 1364
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2167 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2111 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 370 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 429 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 2032 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 1973 Query: 430 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 489 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1972 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 1913 Query: 490 gccgaccgcagctcctcctcgaact 514 | || ||||||||||||||||||| Sbjct: 1912 gtcgcgcgcagctcctcctcgaact 1888
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 4566 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 4510 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 370 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 429 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 4431 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 4372 Query: 430 gggatgggcgccgtgccgttctc 452 || || | ||||||||||||||| Sbjct: 4371 ggaatcgccgccgtgccgttctc 4349
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2166 ggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcgatgtgcttg 2110 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Minus Query: 370 ccgagctcctcgcggacgaagcggtacagcgggaacgacctgctctccttgatcaggttg 429 |||||||||||||| ||||| ||||| ||||| ||||||||| ||| |||| | || Sbjct: 2031 ccgagctcctcgcgcacgaaccggtagagcggatacgacctgcactcggtgattctgctg 1972 Query: 430 gggatgggcgccgtgccgttctcgaaggccacgcgggcggcctcgatctcccgcggcagg 489 || || | ||||||||||||||| | ||| | || |||||||||||| | | ||||| Sbjct: 1971 ggaatcgccgccgtgccgttctccacagccgcacgtgcggcctcgatcgcacctggcaga 1912 Query: 490 gccgaccgcagctcctcctcgaact 514 | || ||||||||||||||||||| Sbjct: 1911 gtcgcgcgcagctcctcctcgaact 1887
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 87.7 bits (44), Expect = 4e-14 Identities = 137/168 (81%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| |||| Sbjct: 2133 gatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaatgtgctt 2074 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | |||| ||||| |||||| |||||| | |||||||| || ||| | |||||| Sbjct: 2073 gccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgtcttctc 2014 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 398 ||||||||||||| | |||||||||||||| || || |||||||| Sbjct: 2013 gccggtgaggtactccgtcccgagctcctcgcgtacaaaccggtacag 1966
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16320140 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16320199 Query: 291 g 291 | Sbjct: 16320200 g 16320200 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20335822 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20335763 Query: 405 cga 407 ||| Sbjct: 20335762 cga 20335760
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| Sbjct: 1625 ggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgatgtgcttg 1569
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 16273373 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 16273432 Query: 291 g 291 | Sbjct: 16273433 g 16273433 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 20262036 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 20261977 Query: 405 cga 407 ||| Sbjct: 20261976 cga 20261974
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||| Sbjct: 67191 gatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgatgtgctt 67250 Query: 291 g 291 | Sbjct: 67251 g 67251
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Minus Query: 231 gatgggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagctt 290 ||||||||||||| ||||||||||||||||||| ||||| |||| || || ||| |||| Sbjct: 2136 gatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgtgctt 2077 Query: 291 gttctggctgatgccgaggaagaccttggtgcattcctcgccgggggacagcagcttctc 350 | ||| ||||| ||| || |||||| | ||||||||||| ||| || |||||| Sbjct: 2076 gccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtcttctc 2017 Query: 351 gccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacag 398 ||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 2016 gccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacag 1969
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 ||||||||||||||||||||||||||||||||||| |||| | ||||||| ||||| Sbjct: 3097 ggcaggggctcgccgttccactccttgaggcactccagcagcgcgtcgatgtgcttg 3041
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagca 274 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1011 ggcaggggctcgccgttccactccttgaggcactcaagca 972
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 238 aggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 |||||||||||||||||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 376 aggggctcgccgttccactccttgagacactccagcagcgcgtcgatgtgcttg 323
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 110514 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 110455 Query: 405 cga 407 ||| Sbjct: 110454 cga 110452
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28380582 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28380523 Query: 405 cga 407 ||| Sbjct: 28380522 cga 28380520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 28363031 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 28362972 Query: 405 cga 407 ||| Sbjct: 28362971 cga 28362969
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||||||||| |||||| || ||||||||||| ||| ||||| | |||||||||| | Sbjct: 175879 cttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggta 175938 Query: 405 cga 407 ||| Sbjct: 175939 cga 175941
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttg 291 ||||| |||||||| ||||||||||||||||| || |||| | ||||||| ||||| Sbjct: 1046 ggcagaggctcgccattccactccttgaggcattccagcagcgcgtcgatgtgcttg 990
>ref|XM_310523.2| Anopheles gambiae str. PEST ENSANGP00000017298 (ENSANGG00000014809), partial mRNA Length = 1971 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 491 ccgaccgcagctcctcctcgaacttgtt 518 |||||||||||| ||||||||||||||| Sbjct: 367 ccgaccgcagcttctcctcgaacttgtt 340
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggcaggggctcgccgttccactccttgaggcactc 269 ||||||||||| || ||||||||||| |||||||| Sbjct: 1420 ggcaggggctcaccattccactccttcaggcactc 1386
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 gccgtggtccacgagcacggcg 595 |||||||||||||||||||||| Sbjct: 74273 gccgtggtccacgagcacggcg 74252
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ctcgctctcggcctcgccggg 560 ||||||||||||||||||||| Sbjct: 1787845 ctcgctctcggcctcgccggg 1787825
>ref|XR_005088.1| PREDICTED: Mus musculus hypothetical protein LOC677558 (LOC677558), mRNA Length = 1008 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 951 atttttggatgtactttggaa 971
>ref|XR_004983.1| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC676880), mRNA Length = 1639 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 1582 atttttggatgtactttggaa 1602
>ref|XM_112266.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC195555), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>ref|XM_205435.6| PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 5 (LOC279185), mRNA Length = 1636 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 1579 atttttggatgtactttggaa 1599
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 ggcctcgccggggccggcggt 569 ||||||||||||||||||||| Sbjct: 76802 ggcctcgccggggccggcggt 76822
>ref|XM_746694.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g10390) partial mRNA Length = 2004 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 tcctcctcgaacttgttgatc 522 ||||||||||||||||||||| Sbjct: 1031 tcctcctcgaacttgttgatc 1011
>ref|XM_647174.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (125.t00007) partial mRNA Length = 1203 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 acttgttgatcttggagaaca 532 ||||||||||||||||||||| Sbjct: 123 acttgttgatcttggagaaca 143
>emb|BX005100.9| Mouse DNA sequence from clone RP23-76P22 on chromosome 11 Contains part of the gene for a novel protein (C230094A16Rik), the gene for a novel protein (4931440F15Rik) similar to Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), a ribosomal protein L23 (Rpl23) pseudogene, a preferentially expressed antigen in melanoma like 5 (Pramel5) pseudogene and a CpG island, complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 174370 atttttggatgtactttggaa 174390
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acagcgggaacgacctgctct 415 ||||||||||||||||||||| Sbjct: 1761401 acagcgggaacgacctgctct 1761381
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 ttccactccttgaggcactcgagcatggg 278 ||||||||||||||||| || |||||||| Sbjct: 2185 ttccactccttgaggcattcaagcatggg 2157
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ggaagcctcctcctctcctcc 201 ||||||||||||||||||||| Sbjct: 7993897 ggaagcctcctcctctcctcc 7993917
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 tcggcctcgccggggccggcg 567 ||||||||||||||||||||| Sbjct: 1967615 tcggcctcgccggggccggcg 1967635
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ggaagcctcctcctctcctcc 201 ||||||||||||||||||||| Sbjct: 106540 ggaagcctcctcctctcctcc 106560
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ggaagcctcctcctctcctcc 201 ||||||||||||||||||||| Sbjct: 9002 ggaagcctcctcctctcctcc 9022
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 actttggaagcctcctcctct 196 ||||||||||||||||||||| Sbjct: 44602 actttggaagcctcctcctct 44582
>gb|AY098511.1| Ananas comosus phenylalanine ammonia-lyase mRNA, partial cds Length = 1110 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 ttccactccttgaggcactcgagcatggg 278 ||||||||||| | ||||||||||||||| Sbjct: 864 ttccactccttcaagcactcgagcatggg 836 Score = 42.1 bits (21), Expect = 2.1 Identities = 93/117 (79%) Strand = Plus / Minus Query: 345 cttctcgccggtgaggtacacgcagccgagctcctcgcggacgaagcggtacagcgggaa 404 |||||| ||||| |||||| || ||||||||||| | ||||| | ||||||||| | Sbjct: 769 cttctccccggttaggtacccggctccgagctcctccctaacgaacctgtacagcggata 710 Query: 405 cgacctgctctccttgatcaggttggggatgggcgccgtgccgttctcgaaggccac 461 ||||||| ||||| |||| ||| | ||| | || ||||||||||||||| ||||| Sbjct: 709 agacctgcactcctggatcctgttcgcgatcgccgacgtgccgttctcgaatgccac 653
>emb|AL626771.9| Mouse DNA sequence from clone RP23-281O10 on chromosome 4, complete sequence Length = 185594 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 42223 atttttggatgtactttggaa 42243
>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete sequence Length = 172962 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 147699 atttttggatgtactttggaa 147719 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 atttttggatgtactttggaa 184 ||||||||||||||||||||| Sbjct: 36754 atttttggatgtactttggaa 36774
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 cgcgggcggcctcgatctcc 480 |||||||||||||||||||| Sbjct: 86711 cgcgggcggcctcgatctcc 86730
>gb|AC145477.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1402B06, complete sequence Length = 134001 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaatacaacgacaatatct 23 |||||||||||||||||||| Sbjct: 120777 aaaatacaacgacaatatct 120758
>ref|XM_423398.1| PREDICTED: Gallus gallus similar to cingulin (LOC425665), mRNA Length = 3681 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ccgcagctcctcctcgaact 514 |||||||||||||||||||| Sbjct: 1902 ccgcagctcctcctcgaact 1883
>ref|XM_363465.1| Magnaporthe grisea 70-15 hypothetical protein (MG01391.4) partial mRNA Length = 1518 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 agccgagctcctcgcggacg 387 |||||||||||||||||||| Sbjct: 436 agccgagctcctcgcggacg 417
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 gcattcctcgccgggggacagcag 344 |||| ||||||||||||||||||| Sbjct: 1008707 gcatacctcgccgggggacagcag 1008730
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aaaatacaacgacaatatct 23 |||||||||||||||||||| Sbjct: 27966 aaaatacaacgacaatatct 27947
>ref|XM_541888.2| PREDICTED: Canis familiaris similar to DALR anticodon binding domain containing 3 isoform 1 (LOC484772), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 ccacgagcacggcgcgcagc 601 |||||||||||||||||||| Sbjct: 757 ccacgagcacggcgcgcagc 738
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 tcgaaggccacgcgggcggc 470 |||||||||||||||||||| Sbjct: 2786407 tcgaaggccacgcgggcggc 2786426
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 452 cgaaggccacgcgggcggcctcgatctc 479 ||||||||| |||| ||||||||||||| Sbjct: 4080463 cgaaggccatgcggtcggcctcgatctc 4080490
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 cgcgggcggcctcgatctcc 480 |||||||||||||||||||| Sbjct: 30973 cgcgggcggcctcgatctcc 30954
>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete sequence Length = 252440 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 taagcgtcttatttttggat 173 |||||||||||||||||||| Sbjct: 198253 taagcgtcttatttttggat 198234
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gatgccgaggaagaccttgg 319 |||||||||||||||||||| Sbjct: 1290667 gatgccgaggaagaccttgg 1290648
>ref|NM_174427.2| Bos taurus polymerase (DNA directed), delta 1, catalytic subunit 125kDa (POLD1), mRNA Length = 3451 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 cagggccgaccgcagctcctcctc 509 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 ccacgagcacggcgcgcagc 601 |||||||||||||||||||| Sbjct: 72231 ccacgagcacggcgcgcagc 72212
>gb|AE004548.1| Pseudomonas aeruginosa PAO1, section 109 of 529 of the complete genome Length = 10054 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 gcagctcctcctcgaacttg 516 |||||||||||||||||||| Sbjct: 5055 gcagctcctcctcgaacttg 5036
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 ctcggcctcgccggggccgg 565 |||||||||||||||||||| Sbjct: 1166534 ctcggcctcgccggggccgg 1166515
>gb|AY850327.1| Magnaporthe grisea cytochrome P450-like protein mRNA, complete cds Length = 2006 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 agccgagctcctcgcggacg 387 |||||||||||||||||||| Sbjct: 484 agccgagctcctcgcggacg 465
>dbj|AB240063.1| Streptomyces lavendulae subsp. lavendulae orfA, bpsA, bpsB, bpsC genes for Ribose-phosphate pyrophosphokinase, Blue-pigment synthetase, Putative pathway-specific transcriptional activator, S-adenosylmethionine synthetase, partial and complete cds Length = 5913 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tctcgaaggccacgcgggcg 468 |||||||||||||||||||| Sbjct: 4016 tctcgaaggccacgcgggcg 3997
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 gcctcgccggggccggcggt 569 |||||||||||||||||||| Sbjct: 19345 gcctcgccggggccggcggt 19364
>gb|M80395.1|BOVDPLDA Bovine DNA polymerase delta catalytic subunit mRNA, complete cds Length = 3451 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 cagggccgaccgcagctcctcctc 509 |||||||||| ||||||||||||| Sbjct: 239 cagggccgactgcagctcctcctc 216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,421,189 Number of Sequences: 3902068 Number of extensions: 4421189 Number of successful extensions: 100094 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98351 Number of HSP's gapped (non-prelim): 1726 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
