Clone Name | rbasd13j03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 pre... | 32 | 2.3 | 2 | SYV_GLOVI (Q7NCQ9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... | 30 | 8.7 |
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>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 31.6 bits (70), Expect = 2.3 Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 5/150 (3%) Frame = +1 Query: 151 YKGQVSQSSDF***SLLXXXXXXXXXFPFTSVISHSAASSVERKAARDTDRTGLSSVFHG 330 Y G +S +S S++ +S S++SS + + ++ SS Sbjct: 123 YSGTISSTSIAP--SMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSS 180 Query: 331 SRQNSNKGR*TTTSDSFHLVCDASSSHARCSRTSLRVPWSDGRFSGTSM-----PCSNPI 495 S +S+K +++S S +SSS + S +S + S +FS +S P S+ Sbjct: 181 SSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSK---SSSKFSSSSFITSTTPASSSS 237 Query: 496 LHLVLVNYRMSRGYDMDTVSTNLSGVSWVV 585 ++ N + + D + S+ S VS VV Sbjct: 238 SGAIVSNAKTASTDDSSSASSATSSVSSVV 267
>SYV_GLOVI (Q7NCQ9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 897 Score = 29.6 bits (65), Expect = 8.7 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = -3 Query: 439 LGGKFCCT*HDLMKHRRRDENYRSSWFSGLCWSSVAIHETQRKAL 305 +G C T D++ RR + +++ W G +S+A+H K L Sbjct: 54 MGHALCFTLPDVVVRYRRMKGFKTLWLPGTDHASIAVHTVLEKQL 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,950,159 Number of Sequences: 219361 Number of extensions: 2105758 Number of successful extensions: 5156 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5154 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)