>SP2D_BACAM (P13251) Stage II sporulation protein D|
          Length = 344

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = -1

Query: 591 LKKQKQPWDFKXSRYCASN*GS------KNNIRLCG-SKVGQIDEDSLGHVVIVTSTTVR 433
           LK  K PWD K  +Y A+   S      K  ++L G   VGQI   + GH V       +
Sbjct: 203 LKSVKSPWDKKSPKYLATRTFSVPEFQQKLGVQLAGQDTVGQITARTPGHQVATAVINGK 262

Query: 432 KLEG 421
           KL+G
Sbjct: 263 KLKG 266

>SRG13_CAEEL (P46567) Serpentine receptor class gamma-13 (Protein srg-13)|
          Length = 336

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
 Frame = +2

Query: 209 FFIVNALYILLS---SL*NVLY**TEGVLYIYISMVIPVVAPVDDSKYSACT*YIKLCIK 379
           FFI+ A  +++    SL  +L     G L+IY++++ P++AP   +          + +K
Sbjct: 68  FFIIYAADLIMGMYMSLSEILV----GRLFIYVTLLCPILAPYFFTP--------SIFLK 115

Query: 380 TFLEILTHC*YKYKPSS--FLTVVDVTMTTWPKESSSIWPTLLPHSLMLFF 526
            F   L+H    +K  S  FL+   +T   +P   S+IW  +L   +++ F
Sbjct: 116 IFF-TLSHYSQGFKTVSQVFLSFNRMTCVVFPVGYSAIWKRILTPIIIVLF 165

>SP2D_BACSU (P07372) Stage II sporulation protein D|
          Length = 343

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = -1

Query: 591 LKKQKQPWDFKXSRY------CASN*GSKNNIRLCGSK-VGQIDEDSLGHVVIVTSTTVR 433
           LK  K PWD K  +Y       A+    K  ++L GS  VG+I  ++ GH V       +
Sbjct: 202 LKSVKSPWDKKSPKYKATKTFTAAEFQQKLGVKLDGSSAVGKITGETPGHQVATAVINGK 261

Query: 432 KLEG 421
            L+G
Sbjct: 262 TLKG 265


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,344,965
Number of Sequences: 219361
Number of extensions: 1646035
Number of successful extensions: 3348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3347
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)