>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  442 bits (223), Expect = e-121
 Identities = 232/234 (99%), Gaps = 1/234 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tttctttccgtgcccaaatttgaagccgctgatgaccggggcncgtaactttcaaattct 60
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4204 tttctttccgtgcccaaatttgaagccgctgatgaccggggcacgtaactttcaaattct 4145

                                                                        
Query: 61   agcgcgagcatatgatcaccatgataattattcacatttgcaaagataatactaaaacaa 120
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 agcgcgag-atatgatcaccatgataattattcacatttgcaaagataatactaaaacaa 4086

                                                                        
Query: 121  tactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaatcg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4085 tactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatcaatcg 4026

                                                                  
Query: 181  ctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagag 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 ctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagag 3972



 Score =  145 bits (73), Expect = 1e-31
 Identities = 79/82 (96%)
 Strand = Plus / Minus

                                                                        
Query: 283  ccttgtcccttggnaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 342
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 3759

                                  
Query: 343  gaacacttngnctgcgccgacg 364
            |||||||| | |||||||||||
Sbjct: 3758 gaacacttcgtctgcgccgacg 3737



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 39/39 (100%)
 Strand = Plus / Minus

                                                   
Query: 247  cctcgacaacgtgtcttccccagtcctgaactcgtgcct 285
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 3958 cctcgacaacgtgtcttccccagtcctgaactcgtgcct 3920

>emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (drg3 gene)
          Length = 469

 Score =  121 bits (61), Expect = 2e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                       
Query: 283 ccttgtcccttggnaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 342
           ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 469 ccttgtcccttggtaggtgatggtggacaccggggtgacgccgacggccgttcccgtgca 410

                   
Query: 343 gaacactt 350
           ||||||||
Sbjct: 409 gaacactt 402

>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 186  gtccatcctttcttgtcctctgccagccccatctggat 223
            |||||||||||||||||||| ||||| |||||||||||
Sbjct: 1232 gtccatcctttcttgtcctcagccaggcccatctggat 1195

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 186     gtccatcctttcttgtcctctgccagccccatctggat 223
               |||||||||||||||||||| ||||| |||||||||||
Sbjct: 6920162 gtccatcctttcttgtcctcagccaggcccatctggat 6920125

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 186     gtccatcctttcttgtcctctgccagccccatctggat 223
               |||||||||||||||||||| ||||| |||||||||||
Sbjct: 6918057 gtccatcctttcttgtcctcagccaggcccatctggat 6918020

>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 186    gtccatcctttcttgtcctctgccagccccatctggat 223
              |||||||||||||||||||| ||||| |||||||||||
Sbjct: 116095 gtccatcctttcttgtcctcagccaggcccatctggat 116058

>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 186   gtccatcctttcttgtcctctgccagccccatctggat 223
             |||||||||||||||||||| ||||| |||||||||||
Sbjct: 86759 gtccatcctttcttgtcctcagccaggcccatctggat 86722

>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
            insert sequence
          Length = 1738

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 186  gtccatcctttcttgtcctctgccagccccatctggat 223
            |||||||||||||||||||| ||||| |||||||||||
Sbjct: 1352 gtccatcctttcttgtcctcagccaggcccatctggat 1315

>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
            insert sequence
          Length = 1577

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 186  gtccatcctttcttgtcctctgccagccccatctggat 223
            |||||||||||||||||||| ||||| |||||||||||
Sbjct: 1347 gtccatcctttcttgtcctcagccaggcccatctggat 1310

>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ttcctaatcaatcaatcaatc 179
              |||||||||||||||||||||
Sbjct: 139485 ttcctaatcaatcaatcaatc 139465

>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    ttcacatttgcaaagataata 111
             |||||||||||||||||||||
Sbjct: 19225 ttcacatttgcaaagataata 19245

>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    ttcacatttgcaaagataata 111
             |||||||||||||||||||||
Sbjct: 80468 ttcacatttgcaaagataata 80448

>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 91   ttcacatttgcaaagataata 111
            |||||||||||||||||||||
Sbjct: 3228 ttcacatttgcaaagataata 3208

>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   aatcaatcaatcaatcgcta 183
             ||||||||||||||||||||
Sbjct: 28809 aatcaatcaatcaatcgcta 28828

>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    aatcaatcaatcaatcgcta 183
              ||||||||||||||||||||
Sbjct: 645138 aatcaatcaatcaatcgcta 645157

>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 155   tcttttcctaatcaatcaatcaat 178
             |||||||||||||||| |||||||
Sbjct: 33695 tcttttcctaatcaatgaatcaat 33718

>ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 tttcttgtcctctgccagcc 213
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973

>gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complete sequence
          Length = 101215

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   tcttttcctaatcaatcaatcaat 178
             |||||||||||||||| |||||||
Sbjct: 29235 tcttttcctaatcaatgaatcaat 29212

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 159     ttcctaatcaatcaatcaat 178
               ||||||||||||||||||||
Sbjct: 1678262 ttcctaatcaatcaatcaat 1678281

>emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22 on chromosome Xq25-26.3,
             complete sequence
          Length = 85538

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   ctcttttcctaatcaatcaa 173
             ||||||||||||||||||||
Sbjct: 54297 ctcttttcctaatcaatcaa 54316

>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    ccatgataattattcacatttgca 102
             |||||||||| |||||||||||||
Sbjct: 54868 ccatgataataattcacatttgca 54891

>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    tcctaatcaatcaatcaatc 179
              ||||||||||||||||||||
Sbjct: 212251 tcctaatcaatcaatcaatc 212270

>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5,
             complete sequence
          Length = 189369

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   atactaaaacaatactggat 128
             ||||||||||||||||||||
Sbjct: 68759 atactaaaacaatactggat 68740

>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tttcctaatcaatcaatcaa 177
             ||||||||||||||||||||
Sbjct: 45507 tttcctaatcaatcaatcaa 45526

>gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) gene,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  tttcttgtcctctgccagcc 213
            ||||||||||||||||||||
Sbjct: 2428 tttcttgtcctctgccagcc 2409

>gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) mRNA,
           complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 tttcttgtcctctgccagcc 213
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973

>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ctaaaacaatactggatgct 131
            ||||||||||||||||||||
Sbjct: 6707 ctaaaacaatactggatgct 6726

>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    aatactaaaacaatactgga 127
              ||||||||||||||||||||
Sbjct: 137920 aatactaaaacaatactgga 137939

>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tcctctgccagccccatctg 220
              ||||||||||||||||||||
Sbjct: 133506 tcctctgccagccccatctg 133487

>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
             complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   cttttcctaatcaatcaatcaatc 179
             |||||| |||||||||||||||||
Sbjct: 15128 cttttcttaatcaatcaatcaatc 15151

>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   aatactaaaacaatactgga 127
             ||||||||||||||||||||
Sbjct: 10547 aatactaaaacaatactgga 10566

>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
             complete sequence
          Length = 179116

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   cttttcctaatcaatcaatcaatc 179
             ||||||| ||||||||||||||||
Sbjct: 89955 cttttccaaatcaatcaatcaatc 89978

>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152586

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    tcctctgccagccccatctg 220
              ||||||||||||||||||||
Sbjct: 129010 tcctctgccagccccatctg 129029

>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    tcctaatcaatcaatcaatc 179
              ||||||||||||||||||||
Sbjct: 138815 tcctaatcaatcaatcaatc 138834

>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  aatcaatcaatcaatcgcta 183
            ||||||||||||||||||||
Sbjct: 7916 aatcaatcaatcaatcgcta 7897

>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    ctaaaacaatactggatgct 131
              ||||||||||||||||||||
Sbjct: 115388 ctaaaacaatactggatgct 115407

>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence
          Length = 153019

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gatggtcgacaccggggtga 320
             ||||||||||||||||||||
Sbjct: 53157 gatggtcgacaccggggtga 53138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,636,136
Number of Sequences: 3902068
Number of extensions: 2636136
Number of successful extensions: 129689
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129453
Number of HSP's gapped (non-prelim): 235
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)