Clone Name | rbasd13i09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_197024.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0055P24.10), mRNA Length = 615 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Minus Query: 226 atctcccagttgaggttcgacgccaccctgtcgtggtaaggcacataatcctcgagcttc 285 ||||||||||| || ||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 596 atctcccagttcagcttcgatgccaccctgtcgtggtaaggcacgtactcctctagcttg 537 Query: 286 tccatgagctcctccgcggtgggggcgagcacgatgatgcggcgcgcgctggtgttaatg 345 ||||| ||||||||||| || || || | |||||||| || |||||||||||||| ||| Sbjct: 536 tccatcagctcctccgccgtcggcgccatgacgatgatccgccgcgcgctggtgttgatg 477 Query: 346 aacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacg 405 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 476 aacccttcctccaccgccttgtcgatgaacgtcagcagcgagttgtagtacccgtcgacg 417 Query: 406 ttcagcagcccaactggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagc 465 || ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 416 ttgagcagcccaaccggcttatgatggatgccaagctgtgcccatgtaatcacctcgagc 357 Query: 466 agctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcagagtgccttgcc 525 ||||||||||| || || || |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 356 agctcctccagagtcccgtaccctccaggtagggctatgaaggcatcagactgccttgcc 297 Query: 526 atctctgccttcctctggtgcatgtctgccactgccctcacctcccccactgtctcaccg 585 |||||||||||||| |||||||| || || |||| |||||||||||||||||||||||| Sbjct: 296 atctctgccttcctttggtgcatatcagcaactggcctcacctcccccactgtctcacca 237 Query: 586 cttatctctggggtcatgagggtcttgggaatgacaccaatgacgtgcctgccgccgtcg 645 ||||||||||| |||||||| |||||||||||||| || |||||||| | |||||||||| Sbjct: 236 cttatctctggcgtcatgagagtcttgggaatgaccccgatgacgtggcggccgccgtcg 177
>dbj|AK108805.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D01, full insert sequence Length = 1344 Score = 492 bits (248), Expect = e-136 Identities = 377/420 (89%) Strand = Plus / Minus Query: 226 atctcccagttgaggttcgacgccaccctgtcgtggtaaggcacataatcctcgagcttc 285 ||||||||||| || ||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 815 atctcccagttcagcttcgatgccaccctgtcgtggtaaggcacgtactcctctagcttg 756 Query: 286 tccatgagctcctccgcggtgggggcgagcacgatgatgcggcgcgcgctggtgttaatg 345 ||||| ||||||||||| || || || | |||||||| || |||||||||||||| ||| Sbjct: 755 tccatcagctcctccgccgtcggcgccatgacgatgatccgccgcgcgctggtgttgatg 696 Query: 346 aacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacg 405 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 695 aacccttcctccaccgccttgtcgatgaacgtcagcagcgagttgtagtacccgtcgacg 636 Query: 406 ttcagcagcccaactggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagc 465 || ||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 635 ttgagcagcccaaccggcttatgatggatgccaagctgtgcccatgtaatcacctcgagc 576 Query: 466 agctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcagagtgccttgcc 525 ||||||||||| || || || |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 575 agctcctccagagtcccgtaccctccaggtagggctatgaaggcatcagactgccttgcc 516 Query: 526 atctctgccttcctctggtgcatgtctgccactgccctcacctcccccactgtctcaccg 585 |||||||||||||| |||||||| || || |||| |||||||||||||||||||||||| Sbjct: 515 atctctgccttcctttggtgcatatcagcaactggcctcacctcccccactgtctcacca 456 Query: 586 cttatctctggggtcatgagggtcttgggaatgacaccaatgacgtgcctgccgccgtcg 645 ||||||||||| |||||||| |||||||||||||| || |||||||| | |||||||||| Sbjct: 455 cttatctctggcgtcatgagagtcttgggaatgaccccgatgacgtggcggccgccgtcg 396
>ref|XM_468563.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 278 bits (140), Expect = 2e-71 Identities = 284/332 (85%) Strand = Plus / Minus Query: 315 cacgatgatgcggcgcgcgctggtgttaatgaacccttcctccaccgccttgtcgatgaa 374 ||||||||||||||| || |||| | | ||||| ||||| ||||| || | ||||||||| Sbjct: 528 cacgatgatgcggcgagcactggggctgatgaagccttcttccacggcttggtcgatgaa 469 Query: 375 agtcagcagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggat 434 || ||||| |||||||||||||| || ||||||||||||||||| || || |||||||| Sbjct: 468 tgtgagcagggagttgtagtacccatcaacgttcagcagcccaaccggtttatgatggat 409 Query: 435 gccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccagg 494 ||| | ||||||||||| || ||||| |||||||| |||||||| || || ||||| || Sbjct: 408 gcctaattgcgcccatgtgatgacttcaagcagctcttccagtgttccgtatcctccggg 349 Query: 495 aagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgc 554 ||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| | Sbjct: 348 cagggctatgaatgcatcagactgcctcgccatctcagccttcctctggtgcatgtcgga 289 Query: 555 cactgccctcacctcccccactgtctcaccgcttatctctggggtcatgagggtcttggg 614 ||||| |||||||||||| |||||||| ||| ||||||| ||||||||||| |||||||| Sbjct: 288 cactggcctcacctcccctactgtctctccgattatctcgggggtcatgagagtcttggg 229 Query: 615 aatgacaccaatgacgtgcctgccgccgtcgt 646 ||||| |||||||| || ||||| ||||||| Sbjct: 228 gatgaccccaatgacatgtctgccaccgtcgt 197
>dbj|AK099538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032C19, full insert sequence Length = 1006 Score = 270 bits (136), Expect = 5e-69 Identities = 277/324 (85%) Strand = Plus / Minus Query: 315 cacgatgatgcggcgcgcgctggtgttaatgaacccttcctccaccgccttgtcgatgaa 374 ||||||||||||||| || |||| | | ||||| ||||| ||||| || | ||||||||| Sbjct: 611 cacgatgatgcggcgagcactggggctgatgaagccttcttccacggcttggtcgatgaa 552 Query: 375 agtcagcagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggat 434 || ||||| |||||||||||||| || ||||||||||||||||| || || |||||||| Sbjct: 551 tgtgagcagggagttgtagtacccatcaacgttcagcagcccaaccggtttatgatggat 492 Query: 435 gccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccagg 494 ||| | ||||||||||| || ||||| |||||||| |||||||| || || ||||| || Sbjct: 491 gcctaattgcgcccatgtgatgacttcaagcagctcttccagtgttccgtatcctccggg 432 Query: 495 aagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgc 554 ||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| | Sbjct: 431 cagggctatgaatgcatcagactgcctcgccatctcagccttcctctggtgcatgtcgga 372 Query: 555 cactgccctcacctcccccactgtctcaccgcttatctctggggtcatgagggtcttggg 614 ||||| |||||||||||| |||||||| ||| ||||||| ||||||||||| |||||||| Sbjct: 371 cactggcctcacctcccctactgtctctccgattatctcgggggtcatgagagtcttggg 312 Query: 615 aatgacaccaatgacgtgcctgcc 638 ||||| |||||||| || ||||| Sbjct: 311 gatgaccccaatgacatgtctgcc 288
>ref|XM_473199.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 696 Score = 170 bits (86), Expect = 4e-39 Identities = 203/242 (83%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 |||||| |||||||||| || || |||||||| | |||||| ||||||||||| |||||| Sbjct: 485 atgaactcttcctccacagctttatcgatgaacgacagcagagagttgtagtagccgtcc 426 Query: 403 acgttcagcagcccaactggcttgtgatggatgccaagctgcgcccatgtaatcacttcg 462 || || ||||| ||||| ||||||| || ||||| ||||| ||||| | ||| ||||| Sbjct: 425 acatttagcaggccaaccggcttgtcgtgaatgccgagctgagcccaggcaattacttcc 366 Query: 463 agcagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcagagtgcctt 522 || ||||| || ||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct: 365 aggagctcttcaagtgttccatacccaccaggcagtgctatgaacgcatcagattgcctg 306 Query: 523 gccatctctgccttcctctggtgcatgtctgccactgccctcacctcccccactgtctca 582 |||||||| ||||||||||| ||||| ||||||||||| |||||||||| ||||||||| Sbjct: 305 gccatctcagccttcctctgatgcatatctgccactgctttcacctcccctactgtctca 246 Query: 583 cc 584 || Sbjct: 245 cc 244
>dbj|AK069293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013B19, full insert sequence Length = 1112 Score = 170 bits (86), Expect = 4e-39 Identities = 203/242 (83%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 |||||| |||||||||| || || |||||||| | |||||| ||||||||||| |||||| Sbjct: 663 atgaactcttcctccacagctttatcgatgaacgacagcagagagttgtagtagccgtcc 604 Query: 403 acgttcagcagcccaactggcttgtgatggatgccaagctgcgcccatgtaatcacttcg 462 || || ||||| ||||| ||||||| || ||||| ||||| ||||| | ||| ||||| Sbjct: 603 acatttagcaggccaaccggcttgtcgtgaatgccgagctgagcccaggcaattacttcc 544 Query: 463 agcagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcagagtgcctt 522 || ||||| || ||||| ||||| || ||||| || |||||||| || ||||| ||||| Sbjct: 543 aggagctcttcaagtgttccatacccaccaggcagtgctatgaacgcatcagattgcctg 484 Query: 523 gccatctctgccttcctctggtgcatgtctgccactgccctcacctcccccactgtctca 582 |||||||| ||||||||||| ||||| ||||||||||| |||||||||| ||||||||| Sbjct: 483 gccatctcagccttcctctgatgcatatctgccactgctttcacctcccctactgtctca 424 Query: 583 cc 584 || Sbjct: 423 cc 422
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 168 bits (85), Expect = 1e-38 Identities = 130/145 (89%) Strand = Plus / Minus Query: 275 cctcgagcttctccatgagctcctccgcggtgggggcgagcacgatgatgcggcgcgcgc 334 |||| ||||| ||||| ||||||||||| || || || | |||||||| || ||||||| Sbjct: 17490132 cctctagcttgtccatcagctcctccgccgtcggcgccatgacgatgatccgccgcgcgc 17490073 Query: 335 tggtgttaatgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagt 394 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 17490072 tggtgttgatgaacccttcctccaccgccttgtcgatgaacgtcagcagcgagttgtagt 17490013 Query: 395 acccgtccacgttcagcagcccaac 419 ||||||| ||||| ||||||||||| Sbjct: 17490012 acccgtcgacgttgagcagcccaac 17489988 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 17489403 ccaggtagggctatgaaggcatcagactgccttgccatctctgccttcctttggtgcata 17489344 Query: 550 tctgccactgccctcacctcccccactgtctcaccgcttatct 592 || || |||| |||||||||||||||||||||||| ||||||| Sbjct: 17489343 tcagcaactggcctcacctcccccactgtctcaccacttatct 17489301 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccag 476 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 17489897 ggcttatgatggatgccaagctgtgcccatgtaatcacctcgagcagctcctccag 17489842 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 226 atctcccagttgaggttcgacgccaccctgtcgtggtaaggcac 269 ||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 17490298 atctcccagttcagcttcgatgccaccctgtcgtggtaaggcac 17490255 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 591 ctctggggtcatgagggtcttgggaatgac 620 |||||| |||||||| |||||||||||||| Sbjct: 17487361 ctctggcgtcatgagagtcttgggaatgac 17487332
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 168 bits (85), Expect = 1e-38 Identities = 130/145 (89%) Strand = Plus / Minus Query: 275 cctcgagcttctccatgagctcctccgcggtgggggcgagcacgatgatgcggcgcgcgc 334 |||| ||||| ||||| ||||||||||| || || || | |||||||| || ||||||| Sbjct: 119127 cctctagcttgtccatcagctcctccgccgtcggcgccatgacgatgatccgccgcgcgc 119068 Query: 335 tggtgttaatgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagt 394 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 119067 tggtgttgatgaacccttcctccaccgccttgtcgatgaacgtcagcagcgagttgtagt 119008 Query: 395 acccgtccacgttcagcagcccaac 419 ||||||| ||||| ||||||||||| Sbjct: 119007 acccgtcgacgttgagcagcccaac 118983 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 118398 ccaggtagggctatgaaggcatcagactgccttgccatctctgccttcctttggtgcata 118339 Query: 550 tctgccactgccctcacctcccccactgtctcaccgcttatct 592 || || |||| |||||||||||||||||||||||| ||||||| Sbjct: 118338 tcagcaactggcctcacctcccccactgtctcaccacttatct 118296 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccag 476 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 118892 ggcttatgatggatgccaagctgtgcccatgtaatcacctcgagcagctcctccag 118837 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 226 atctcccagttgaggttcgacgccaccctgtcgtggtaaggcac 269 ||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 119293 atctcccagttcagcttcgatgccaccctgtcgtggtaaggcac 119250 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 591 ctctggggtcatgagggtcttgggaatgac 620 |||||| |||||||| |||||||||||||| Sbjct: 116356 ctctggcgtcatgagagtcttgggaatgac 116327
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 168 bits (85), Expect = 1e-38 Identities = 130/145 (89%) Strand = Plus / Minus Query: 275 cctcgagcttctccatgagctcctccgcggtgggggcgagcacgatgatgcggcgcgcgc 334 |||| ||||| ||||| ||||||||||| || || || | |||||||| || ||||||| Sbjct: 17499172 cctctagcttgtccatcagctcctccgccgtcggcgccatgacgatgatccgccgcgcgc 17499113 Query: 335 tggtgttaatgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagt 394 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 17499112 tggtgttgatgaacccttcctccaccgccttgtcgatgaacgtcagcagcgagttgtagt 17499053 Query: 395 acccgtccacgttcagcagcccaac 419 ||||||| ||||| ||||||||||| Sbjct: 17499052 acccgtcgacgttgagcagcccaac 17499028 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Minus Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 ||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 17498443 ccaggtagggctatgaaggcatcagactgccttgccatctctgccttcctttggtgcata 17498384 Query: 550 tctgccactgccctcacctcccccactgtctcaccgcttatct 592 || || |||| |||||||||||||||||||||||| ||||||| Sbjct: 17498383 tcagcaactggcctcacctcccccactgtctcaccacttatct 17498341 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccag 476 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 17498937 ggcttatgatggatgccaagctgtgcccatgtaatcacctcgagcagctcctccag 17498882 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 226 atctcccagttgaggttcgacgccaccctgtcgtggtaaggcac 269 ||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 17499338 atctcccagttcagcttcgatgccaccctgtcgtggtaaggcac 17499295 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 591 ctctggggtcatgagggtcttgggaatgac 620 |||||| |||||||| |||||||||||||| Sbjct: 17496401 ctctggcgtcatgagagtcttgggaatgac 17496372
>ref|XM_470489.1| Oryza sativa (japonica cultivar-group), mRNA Length = 856 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 545 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 486 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 485 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 426 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 425 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 366 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 365 tggtgcatgcttcccaccgccctcacctccccca 332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 35900761 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 35900702 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 35900701 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 35900642 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 35900641 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 35900582 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 35900581 tggtgcatgcttcccaccgccctcacctccccca 35900548 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 496 agggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgcc 555 ||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| | | Sbjct: 519147 agggctatgaatgcatcagactgcctcgccatctcagccttcctctggtgcatgtcggac 519088 Query: 556 actgccctcacctcccccactgtctcaccgcttatct 592 |||| |||||||||||| |||||||| ||| |||||| Sbjct: 519087 actggcctcacctcccctactgtctctccgattatct 519051 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 315 cacgatgatgcggcgcgcgctggtgttaatgaacccttcctccaccgccttgtcgatgaa 374 ||||||||||||||| || |||| | | ||||| ||||| ||||| || | ||||||||| Sbjct: 520087 cacgatgatgcggcgagcactggggctgatgaagccttcttccacggcttggtcgatgaa 520028 Query: 375 agtcagcagcgagttgtagtacccgtccacgttcagcagcccaac 419 || ||||| |||||||||||||| || ||||||||||||||||| Sbjct: 520027 tgtgagcagggagttgtagtacccatcaacgttcagcagcccaac 519983 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 427 tgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgt 479 ||||||||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 519815 tgatggatgcctaattgcgcccatgtgatgacttcaagcagctcttccagtgt 519763
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Plus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 60364 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 60423 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 60424 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 60483 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 60484 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 60543 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 60544 tggtgcatgcttcccaccgccctcacctccccca 60577
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 35990891 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 35990832 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 35990831 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 35990772 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 35990771 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 35990712 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 35990711 tggtgcatgcttcccaccgccctcacctccccca 35990678 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 496 agggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgcc 555 ||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| | | Sbjct: 519145 agggctatgaatgcatcagactgcctcgccatctcagccttcctctggtgcatgtcggac 519086 Query: 556 actgccctcacctcccccactgtctcaccgcttatct 592 |||| |||||||||||| |||||||| ||| |||||| Sbjct: 519085 actggcctcacctcccctactgtctctccgattatct 519049 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 315 cacgatgatgcggcgcgcgctggtgttaatgaacccttcctccaccgccttgtcgatgaa 374 ||||||||||||||| || |||| | | ||||| ||||| ||||| || | ||||||||| Sbjct: 520085 cacgatgatgcggcgagcactggggctgatgaagccttcttccacggcttggtcgatgaa 520026 Query: 375 agtcagcagcgagttgtagtacccgtccacgttcagcagcccaac 419 || ||||| |||||||||||||| || ||||||||||||||||| Sbjct: 520025 tgtgagcagggagttgtagtacccatcaacgttcagcagcccaac 519981 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 427 tgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgt 479 ||||||||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 519813 tgatggatgcctaattgcgcccatgtgatgacttcaagcagctcttccagtgt 519761
>dbj|AK104022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-E12, full insert sequence Length = 1039 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 626 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 567 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 566 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 507 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 506 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 447 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 446 tggtgcatgcttcccaccgccctcacctccccca 413
>dbj|AK071705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109G23, full insert sequence Length = 1191 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 687 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 628 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 627 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 568 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 567 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 508 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 507 tggtgcatgcttcccaccgccctcacctccccca 474
>dbj|AK061341.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E01, full insert sequence Length = 1048 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 687 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 628 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 627 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 568 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 567 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 508 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 507 tggtgcatgcttcccaccgccctcacctccccca 474
>dbj|AK059762.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F07, full insert sequence Length = 1084 Score = 115 bits (58), Expect = 2e-22 Identities = 175/214 (81%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagcagcccaact 420 |||||||||||||| | ||||| |||| |||||| ||||| ||||| || || || || Sbjct: 623 gccttgtcgatgaaggcgagcagggagtcgtagtagccgtcgacgttgaggaggccgacg 564 Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgta 480 |||||||| ||||||| ||||| ||||| || || || ||||| ||||||||||| || Sbjct: 563 ggcttgtggtggatgcggagctgagcccaggtgatgacctcgaggagctcctccagcgtg 504 Query: 481 ccatagcctccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctc 540 || ||||| || || ||||| ||||||||||| || | || |||||||| ||||||| | Sbjct: 503 ccgtagccgccggggagggcgatgaaggcgtccgactcccgcgccatctccgccttccgc 444 Query: 541 tggtgcatgtctgccactgccctcacctccccca 574 ||||||||| | |||| |||||||||||||||| Sbjct: 443 tggtgcatgcttcccaccgccctcacctccccca 410
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 496 agggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgcc 555 ||||||||||| || ||||| ||||| |||||||| |||||||||||||||||||| | | Sbjct: 96771 agggctatgaatgcatcagactgcctcgccatctcagccttcctctggtgcatgtcggac 96830 Query: 556 actgccctcacctcccccactgtctcaccgcttatct 592 |||| |||||||||||| |||||||| ||| |||||| Sbjct: 96831 actggcctcacctcccctactgtctctccgattatct 96867 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 315 cacgatgatgcggcgcgcgctggtgttaatgaacccttcctccaccgccttgtcgatgaa 374 ||||||||||||||| || |||| | | ||||| ||||| ||||| || | ||||||||| Sbjct: 95831 cacgatgatgcggcgagcactggggctgatgaagccttcttccacggcttggtcgatgaa 95890 Query: 375 agtcagcagcgagttgtagtacccgtccacgttcagcagcccaac 419 || ||||| |||||||||||||| || ||||||||||||||||| Sbjct: 95891 tgtgagcagggagttgtagtacccatcaacgttcagcagcccaac 95935 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 427 tgatggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgt 479 ||||||||||| | ||||||||||| || ||||| |||||||| |||||||| Sbjct: 96103 tgatggatgcctaattgcgcccatgtgatgacttcaagcagctcttccagtgt 96155
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 ||||| || |||||||| || ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 25935292 ccaggcagtgctatgaacgcatcagattgcctggccatctcagccttcctctgatgcata 25935233 Query: 550 tctgccactgccctcacctcccccactgtctcacc 584 ||||||||||| |||||||||| ||||||||||| Sbjct: 25935232 tctgccactgctttcacctcccctactgtctcacc 25935198 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 |||||| |||||||||| || || |||||||| | |||||| ||||||||||| |||||| Sbjct: 25936369 atgaactcttcctccacagctttatcgatgaacgacagcagagagttgtagtagccgtcc 25936310 Query: 403 acgttcagcagcccaac 419 || || ||||| ||||| Sbjct: 25936309 acatttagcaggccaac 25936293
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 ||||| || |||||||| || ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 61554 ccaggcagtgctatgaacgcatcagattgcctggccatctcagccttcctctgatgcata 61495 Query: 550 tctgccactgccctcacctcccccactgtctcacc 584 ||||||||||| |||||||||| ||||||||||| Sbjct: 61494 tctgccactgctttcacctcccctactgtctcacc 61460 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 |||||| |||||||||| || || |||||||| | |||||| ||||||||||| |||||| Sbjct: 62631 atgaactcttcctccacagctttatcgatgaacgacagcagagagttgtagtagccgtcc 62572 Query: 403 acgttcagcagcccaac 419 || || ||||| ||||| Sbjct: 62571 acatttagcaggccaac 62555
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| || | |||| Sbjct: 25129811 gctataaaggcatcagactgcctggccatctcagccttcctctggtgcatatcggacact 25129752 Query: 559 gccctcacctcccccactgtctcacc 584 || |||||||||||||||||||||| Sbjct: 25129751 gctttcacctcccccactgtctcacc 25129726 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 ||||||||||||||||| || ||||||||||||| ||||| || |||||||| || ||| Sbjct: 25130444 atgaacccttcctccacagctttgtcgatgaaagacagcaacggattgtagtagccatcc 25130385 Query: 403 acgttcagcagcccaac 419 || || ||||||||||| Sbjct: 25130384 acattgagcagcccaac 25130368
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| || | |||| Sbjct: 30204 gctataaaggcatcagactgcctggccatctcagccttcctctggtgcatatcggacact 30145 Query: 559 gccctcacctcccccactgtctcacc 584 || |||||||||||||||||||||| Sbjct: 30144 gctttcacctcccccactgtctcacc 30119 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 ||||||||||||||||| || ||||||||||||| ||||| || |||||||| || ||| Sbjct: 30837 atgaacccttcctccacagctttgtcgatgaaagacagcaacggattgtagtagccatcc 30778 Query: 403 acgttcagcagcccaac 419 || || ||||||||||| Sbjct: 30777 acattgagcagcccaac 30761
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| || | |||| Sbjct: 142799 gctataaaggcatcagactgcctggccatctcagccttcctctggtgcatatcggacact 142740 Query: 559 gccctcacctcccccactgtctcacc 584 || |||||||||||||||||||||| Sbjct: 142739 gctttcacctcccccactgtctcacc 142714 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 343 atgaacccttcctccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtcc 402 ||||||||||||||||| || ||||||||||||| ||||| || |||||||| || ||| Sbjct: 143432 atgaacccttcctccacagctttgtcgatgaaagacagcaacggattgtagtagccatcc 143373 Query: 403 acgttcagcagcccaac 419 || || ||||||||||| Sbjct: 143372 acattgagcagcccaac 143356
>dbj|AK073708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059A17, full insert sequence Length = 2189 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| || | |||| Sbjct: 1270 gctataaaggcatcagactgcctggccatctcagccttcctctggtgcatatcggacact 1329 Query: 559 gccctcacctcccccactgtctcacc 584 || |||||||||||||||||||||| Sbjct: 1330 gctttcacctcccccactgtctcacc 1355
>dbj|AK073319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024M14, full insert sequence Length = 1701 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||| || | |||| Sbjct: 1269 gctataaaggcatcagactgcctggccatctcagccttcctctggtgcatatcggacact 1328 Query: 559 gccctcacctcccccactgtctcacc 584 || |||||||||||||||||||||| Sbjct: 1329 gctttcacctcccccactgtctcacc 1354
>ref|NM_128389.2| Arabidopsis thaliana unknown protein AT2G28305 mRNA, complete cds Length = 1072 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 388 ttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcc 447 |||||||| || ||||| |||| ||| || ||||| || | ||||||||| ||||| ||| Sbjct: 510 ttgtagtatccttccacattcaacagtcccactggtttatcatggatgcctagctgtgcc 451 Query: 448 catgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaag 507 || || || ||||| || ||||| || ||||| ||||| || ||||| | || || || Sbjct: 450 caagtgataacttcaagaagctcttcaagtgtcccatacccaccaggtaaagcgataaaa 391 Query: 508 gcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacc 567 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| Sbjct: 390 gcatcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcact 331 Query: 568 tcccccactgtctcaccgcttatctct 594 || ||||||||||| || |||||||| Sbjct: 330 tctcccactgtctctcctgttatctct 304
>gb|AY081836.1| Arabidopsis thaliana T3B23.2/T3B23.2 mRNA, complete cds Length = 642 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 388 ttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcc 447 |||||||| || ||||| |||| ||| || ||||| || | ||||||||| ||||| ||| Sbjct: 437 ttgtagtatccttccacattcaacagtcccactggtttattatggatgcctagctgtgcc 378 Query: 448 catgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaag 507 || || || ||||| || ||||| || ||||| ||||| || ||||| | || || || Sbjct: 377 caagtgataacttcaagaagctcttcaagtgtcccatacccaccaggtaaagcgataaaa 318 Query: 508 gcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacc 567 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| Sbjct: 317 gcatcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcact 258 Query: 568 tcccccactgtctcaccgcttatctct 594 || ||||||||||| || |||||||| Sbjct: 257 tctcccactgtctctcctgttatctct 231
>gb|AF361629.1| Arabidopsis thaliana T3B23.2/T3B23.2 mRNA, complete cds Length = 896 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 388 ttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcc 447 |||||||| || ||||| |||| ||| || ||||| || | ||||||||| ||||| ||| Sbjct: 510 ttgtagtatccttccacattcaacagtcccactggtttattatggatgcctagctgtgcc 451 Query: 448 catgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaag 507 || || || ||||| || ||||| || ||||| ||||| || ||||| | || || || Sbjct: 450 caagtgataacttcaagaagctcttcaagtgtcccatacccaccaggtaaagcgataaaa 391 Query: 508 gcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacc 567 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| Sbjct: 390 gcatcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcact 331 Query: 568 tcccccactgtctcaccgcttatctct 594 || ||||||||||| || |||||||| Sbjct: 330 tctcccactgtctctcctgttatctct 304
>gb|AY086265.1| Arabidopsis thaliana clone 23166 mRNA, complete sequence Length = 996 Score = 85.7 bits (43), Expect = 2e-13 Identities = 166/207 (80%) Strand = Plus / Minus Query: 388 ttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcc 447 |||||||| || ||||| |||| ||| || ||||| || | ||||||||| ||||| ||| Sbjct: 510 ttgtagtatccttccacattcaacagtcccactggtttatcatggatgcctagctgtgcc 451 Query: 448 catgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaag 507 || || || ||||| || ||||| || ||||| ||||| || ||||| | || || || Sbjct: 450 caagtgataacttcaagaagctcttcaagtgtcccatacccaccaggtaaagcgataaaa 391 Query: 508 gcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacc 567 || ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| Sbjct: 390 gcatcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcact 331 Query: 568 tcccccactgtctcaccgcttatctct 594 || ||||||||||| || |||||||| Sbjct: 330 tctcccactgtctctcctgttatctct 304
>ref|NM_191683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 391 tagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcccat 450 ||||| |||||||| ||||||| ||||||||| |||| ||| || ||||| || | ||| Sbjct: 467 tagtaaccgtccacattcagcaacccaactggtttgtcatgaattccaagttgtgaccaa 408 Query: 451 gtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaaggcg 510 || |||| || | || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct: 407 gttatcatctctaacaactcctccattgttccataccctccaggaagagcgatgaaggca 348 Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtc 551 || || || | ||||||||| || ||||||| |||||||| Sbjct: 347 tcggattggcgtgccatctcagctttcctctcatgcatgtc 307
>dbj|AK099170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088M05, full insert sequence Length = 926 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 391 tagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcccat 450 ||||| |||||||| ||||||| ||||||||| |||| ||| || ||||| || | ||| Sbjct: 497 tagtaaccgtccacattcagcaacccaactggtttgtcatgaattccaagttgtgaccaa 438 Query: 451 gtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaaggcg 510 || |||| || | || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct: 437 gttatcatctctaacaactcctccattgttccataccctccaggaagagcgatgaaggca 378 Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtc 551 || || || | ||||||||| || ||||||| |||||||| Sbjct: 377 tcggattggcgtgccatctcagctttcctctcatgcatgtc 337
>dbj|AK061091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H04, full insert sequence Length = 1120 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 391 tagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcccat 450 ||||| |||||||| ||||||| ||||||||| |||| ||| || ||||| || | ||| Sbjct: 582 tagtaaccgtccacattcagcaacccaactggtttgtcatgaattccaagttgtgaccaa 523 Query: 451 gtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaaggcg 510 || |||| || | || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct: 522 gttatcatctctaacaactcctccattgttccataccctccaggaagagcgatgaaggca 463 Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtc 551 || || || | ||||||||| || ||||||| |||||||| Sbjct: 462 tcggattggcgtgccatctcagctttcctctcatgcatgtc 422
>dbj|AK060272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-G03, full insert sequence Length = 1836 Score = 73.8 bits (37), Expect = 6e-10 Identities = 130/161 (80%) Strand = Plus / Minus Query: 391 tagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgcccat 450 ||||| |||||||| ||||||| ||||||||| |||| ||| || ||||| || | ||| Sbjct: 1407 tagtaaccgtccacattcagcaacccaactggtttgtcatgaattccaagttgtgaccaa 1348 Query: 451 gtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaaggcg 510 || |||| || | || |||||||| ||| ||||| ||||||||||| || |||||||| Sbjct: 1347 gttatcatctctaacaactcctccattgttccataccctccaggaagagcgatgaaggca 1288 Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtc 551 || || || | ||||||||| || ||||||| |||||||| Sbjct: 1287 tcggattggcgtgccatctcagctttcctctcatgcatgtc 1247
>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete sequence Length = 93122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacctcc 570 ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| || Sbjct: 87143 tcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcacttct 87202 Query: 571 cccactgtctc 581 ||||||||||| Sbjct: 87203 cccactgtctc 87213
>gb|AC006202.4| Arabidopsis thaliana chromosome 2 clone T3B23 map mi54, complete sequence Length = 73079 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacctcc 570 ||||||||| | ||||| || || ||||| |||||||||||||| |||||| |||| || Sbjct: 5012 tcagagtgcttagccatttcagctttcctttggtgcatgtctgctactgccttcacttct 5071 Query: 571 cccactgtctc 581 ||||||||||| Sbjct: 5072 cccactgtctc 5082
>ref|NM_120405.1| Arabidopsis thaliana unknown protein AT5G03270 mRNA, complete cds Length = 690 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 429 atggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcc 488 |||||| ||||| || ||||| || |||||||| || |||||||| |||||||||||||| Sbjct: 462 atggataccaagttgtgcccaagttatcacttcaagtagctcctctagtgtaccatagcc 403 Query: 489 tccagg 494 ||||| Sbjct: 402 accagg 397
>gb|AY390584.1| Eucalyptus leucoxylon clone EL27 microsatellite sequence Length = 616 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 355 tccaccgccttgtcgatgaaagtcagcagcgagttgtagtacccgtccacgttcagca 412 ||||| |||||||||||||| || || || ||||||||||||||||||| ||||||| Sbjct: 497 tccactgccttgtcgatgaatgtgaggaggtagttgtagtacccgtccacattcagca 554
>gb|AY108046.1| Zea mays PCO087821 mRNA sequence Length = 702 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 390 gtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctg 443 |||||| |||||||||||||||| ||||||||| |||| |||||| || ||||| Sbjct: 132 gtagtagccgtccacgttcagcaacccaactggtttgtcatggatcccgagctg 79
>ref|NM_129277.2| Arabidopsis thaliana unknown protein AT2G37210 mRNA, complete cds Length = 1016 Score = 58.0 bits (29), Expect = 4e-05 Identities = 188/241 (78%) Strand = Plus / Minus Query: 379 agcagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgcca 438 ||||| ||||||||||| || || || || |||| || || ||||||| ||| || ||| Sbjct: 570 agcagagagttgtagtatccatcaacattgagcaaacccaccggcttgtcatgtatacca 511 Query: 439 agctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagg 498 ||||| ||||| || || ||||| |||| || || ||||| ||||| || || || | | Sbjct: 510 agctgagcccaagttatgacttcaagcaattcttcaagtgttccataaccacctggtaag 451 Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 || || || || ||||||||| | |||||||| || ||||| |||||||| ||||| ||| Sbjct: 450 gcaataaaagcatcagagtgcttagccatctcagctttcctttggtgcatatctgcaact 391 Query: 559 gccctcacctcccccactgtctcaccgcttatctctggggtcatgagggtcttgggaatg 618 || || || || || ||||| ||||| | | |||| | ||||||||||||||||||| Sbjct: 390 gctcttacttctcctactgtttcaccagtcaactctctaggcatgagggtcttgggaatg 331 Query: 619 a 619 | Sbjct: 330 a 330
>gb|AY102554.1| Arabidopsis thaliana hypothetical protein (At2g37210/T2N18.3) mRNA, complete cds Length = 1042 Score = 58.0 bits (29), Expect = 4e-05 Identities = 188/241 (78%) Strand = Plus / Minus Query: 379 agcagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgcca 438 ||||| ||||||||||| || || || || |||| || || ||||||| ||| || ||| Sbjct: 570 agcagagagttgtagtatccatcaacattgagcaaacccaccggcttgtcatgtatacca 511 Query: 439 agctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagg 498 ||||| ||||| || || ||||| |||| || || ||||| ||||| || || || | | Sbjct: 510 agctgagcccaagttatgacttcaagcaattcttcaagtgttccataaccacctggtaag 451 Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 || || || || ||||||||| | |||||||| || ||||| |||||||| ||||| ||| Sbjct: 450 gcaataaaagcatcagagtgcttagccatctcagctttcctttggtgcatatctgcaact 391 Query: 559 gccctcacctcccccactgtctcaccgcttatctctggggtcatgagggtcttgggaatg 618 || || || || || ||||| ||||| | | |||| | ||||||||||||||||||| Sbjct: 390 gctcttacttctcctactgtttcaccagtcaactctctaggcatgagggtcttgggaatg 331 Query: 619 a 619 | Sbjct: 330 a 330
>gb|AY954818.1| Arabidopsis thaliana hypothetical protein (At2g37210) mRNA, complete cds Length = 648 Score = 58.0 bits (29), Expect = 4e-05 Identities = 188/241 (78%) Strand = Plus / Minus Query: 379 agcagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgcca 438 ||||| ||||||||||| || || || || |||| || || ||||||| ||| || ||| Sbjct: 464 agcagagagttgtagtatccatcaacattgagcaaacccaccggcttgtcatgtatacca 405 Query: 439 agctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagg 498 ||||| ||||| || || ||||| |||| || || ||||| ||||| || || || | | Sbjct: 404 agctgagcccaagttatgacttcaagcaattcttcaagtgttccataaccacctggtaag 345 Query: 499 gctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatgtctgccact 558 || || || || ||||||||| | |||||||| || ||||| |||||||| ||||| ||| Sbjct: 344 gcaataaaagcatcagagtgcttagccatctcagctttcctttggtgcatatctgcaact 285 Query: 559 gccctcacctcccccactgtctcaccgcttatctctggggtcatgagggtcttgggaatg 618 || || || || || ||||| ||||| | | |||| | ||||||||||||||||||| Sbjct: 284 gctcttacttctcctactgtttcaccagtcaactctctaggcatgagggtcttgggaatg 225 Query: 619 a 619 | Sbjct: 224 a 224
>ref|NM_120713.3| Arabidopsis thaliana carboxy-lyase AT5G06300 mRNA, complete cds Length = 1022 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 381 cagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaag 440 ||||||||||||||| || |||||||| || || || || ||||| | ||||| || || Sbjct: 517 cagcgagttgtagtaaccatccacgttaagaagacccaccggcttacggtggataccgag 458 Query: 441 ctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggc 500 || ||||||||||| ||||| |||| || || | |||||||| || ||||||||||| Sbjct: 457 ttgagcccatgtaatgacttccagcaattcttctaacgtaccatacccaccaggaagggc 398 Query: 501 tatgaaggcgtc 512 ||||| ||||| Sbjct: 397 aatgaatgcgtc 386
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 429 atggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcc 488 |||||| ||||| || ||||| || |||||||| || |||||||| |||||||||||||| Sbjct: 86612 atggataccaagttgtgcccaagttatcacttcaagtagctcctctagtgtaccatagcc 86553
>gb|BT003704.1| Arabidopsis thaliana At5g06300 mRNA, complete cds Length = 498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 381 cagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaag 440 ||||||||||||||| || |||||||| || || || || ||||| | ||||| || || Sbjct: 291 cagcgagttgtagtaaccatccacgttaagaagacccaccggcttacggtggataccgag 232 Query: 441 ctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggc 500 || ||||||||||| ||||| |||| || || | |||||||| || ||||||||||| Sbjct: 231 ttgagcccatgtaatgacttccagcaattcttctaacgtaccatacccaccaggaagggc 172 Query: 501 tatgaaggcgtc 512 ||||| ||||| Sbjct: 171 aatgaatgcgtc 160
>dbj|AK119117.1| Arabidopsis thaliana At5g06300 mRNA for putative lysine decarboxylase, complete cds, clone: RAFL21-47-I17 Length = 913 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 381 cagcgagttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaag 440 ||||||||||||||| || |||||||| || || || || ||||| | ||||| || || Sbjct: 438 cagcgagttgtagtaaccatccacgttaagaagacccaccggcttacggtggataccgag 379 Query: 441 ctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggc 500 || ||||||||||| ||||| |||| || || | |||||||| || ||||||||||| Sbjct: 378 ttgagcccatgtaatgacttccagcaattcttctaacgtaccatacccaccaggaagggc 319 Query: 501 tatgaaggcgtc 512 ||||| ||||| Sbjct: 318 aatgaatgcgtc 307
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 429 atggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcc 488 |||||| ||||| || ||||| || |||||||| || |||||||| |||||||||||||| Sbjct: 57751 atggataccaagttgtgcccaagttatcacttcaagtagctcctctagtgtaccatagcc 57692
>ref|XM_475809.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 50.1 bits (25), Expect = 0.009 Identities = 94/117 (80%) Strand = Plus / Minus Query: 390 gtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgccca 449 |||||| ||||| || || |||| ||||||||||||| ||| || ||||| || ||| Sbjct: 585 gtagtaaccgtcaacatttagcaatccaactggcttgtcatgaattccaagttggcacca 526 Query: 450 tgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaa 506 ||| |||| || | ||||||||||| ||| |||||||| |||||||| || ||||| Sbjct: 525 tgttatcatctctaacagctcctccattgttccatagcccccaggaagagcaatgaa 469
>gb|AY962192.1| Hevea brasiliensis clone hmct30 microsatellite sequence Length = 621 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 421 ggcttgtgatggatgccaagctgcgcccatgtaatcacttc 461 ||||||| |||||||||||||| ||||||||||| ||||| Sbjct: 246 ggcttgtcgtggatgccaagctgggcccatgtaatgacttc 286
>dbj|AK068633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L23, full insert sequence Length = 836 Score = 50.1 bits (25), Expect = 0.009 Identities = 94/117 (80%) Strand = Plus / Minus Query: 390 gtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgccca 449 |||||| ||||| || || |||| ||||||||||||| ||| || ||||| || ||| Sbjct: 525 gtagtaaccgtcaacatttagcaatccaactggcttgtcatgaattccaagttggcacca 466 Query: 450 tgtaatcacttcgagcagctcctccagtgtaccatagcctccaggaagggctatgaa 506 ||| |||| || | ||||||||||| ||| |||||||| |||||||| || ||||| Sbjct: 465 tgttatcatctctaacagctcctccattgttccatagcccccaggaagagcaatgaa 409
>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19 Length = 48420 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 70 agtagtacaacaacaagagtcaaa 93 |||||||||||||||||||||||| Sbjct: 33143 agtagtacaacaacaagagtcaaa 33166
>ref|XM_469379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 693 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 387 gttgtagtacccgtccacgttcagcagcccaactggcttgtgatggatgccaagctgcgc 446 ||||||||| |||||||| || |||||||| || || |||| ||||| || |||||||| Sbjct: 477 gttgtagtagccgtccacattgagcagccccaccggtttgttgtggatccccagctgcgc 418 Query: 447 cca 449 ||| Sbjct: 417 cca 415
>ref|NM_121233.2| Arabidopsis thaliana unknown protein AT5G11950 transcript variant AT5G11950.1 mRNA, complete cds Length = 884 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 465 cagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcag 514 ||||||||||| ||| ||||| |||||||| || || |||||||| |||| Sbjct: 470 cagctcctccattgttccataacctccagggagtgcaatgaaggcctcag 421
>ref|NM_203039.1| Arabidopsis thaliana unknown protein AT5G11950 transcript variant AT5G11950.2 mRNA, complete cds Length = 865 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 465 cagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcag 514 ||||||||||| ||| ||||| |||||||| || || |||||||| |||| Sbjct: 419 cagctcctccattgttccataacctccagggagtgcaatgaaggcctcag 370
>gb|BT011985.1| Arabidopsis thaliana At5g11950 mRNA sequence Length = 732 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 465 cagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcag 514 ||||||||||| ||| ||||| |||||||| || || |||||||| |||| Sbjct: 447 cagctcctccattgttccataacctccagggagtgcaatgaaggcctcag 398
>gb|BT006409.1| Arabidopsis thaliana At5g11950 gene, complete cds Length = 651 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 465 cagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcag 514 ||||||||||| ||| ||||| |||||||| || || |||||||| |||| Sbjct: 366 cagctcctccattgttccataacctccagggagtgcaatgaaggcctcag 317
>emb|BX833727.1|CNS0A0AM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZA09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 864 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 465 cagctcctccagtgtaccatagcctccaggaagggctatgaaggcgtcag 514 ||||||||||| ||| ||||| |||||||| || || |||||||| |||| Sbjct: 419 cagctcctccattgttccataacctccagggagtgcaatgaaggcctcag 370
>emb|Z97369.1|MLCB250 Mycobacterium leprae cosmid B250 Length = 40603 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 gccttgtcgatgaaagtcagc 381 ||||||||||||||||||||| Sbjct: 31449 gccttgtcgatgaaagtcagc 31429
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10 Length = 318200 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 gccttgtcgatgaaagtcagc 381 ||||||||||||||||||||| Sbjct: 243063 gccttgtcgatgaaagtcagc 243083
>emb|AL391603.1|SPBC29B5 S.pombe chromosome II cosmid c29B5 Length = 14147 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 837 ctggtgttaatgaacccttcc 857
>gb|AY616033.2| Burkholderia cenocepacia phage BcepB1A, complete genome Length = 47399 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 125 caaatcatc-agagttaaacacatggcaa 152 ||||||||| ||||||||||||||||||| Sbjct: 43218 caaatcatcgagagttaaacacatggcaa 43246
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 cctccaccgccttgtcgatga 373 ||||||||||||||||||||| Sbjct: 143026 cctccaccgccttgtcgatga 143006
>ref|NM_001021546.1| Schizosaccharomyces pombe 972h- transcription factor protein (SPBC29B5.01), partial mRNA Length = 1701 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 614 ctggtgttaatgaacccttcc 634
>dbj|D63762.1|YSPATF1 Schizosaccharomyces pombe gene for atf1, complete cds Length = 3903 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 1814 ctggtgttaatgaacccttcc 1834
>gb|U87869.1|SPU87869 Schizosaccharomyces pombe transcription factor Mts1 (mts1) gene, complete cds Length = 4376 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 1626 ctggtgttaatgaacccttcc 1646
>gb|U38237.1|SPU38237 Schizosaccharomyces pombe transcription factor (sss1) gene, complete cds Length = 1986 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 713 ctggtgttaatgaacccttcc 733
>dbj|D63666.1| Fission yeast DNA for bZIP protein, complete cds Length = 4339 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 2427 ctggtgttaatgaacccttcc 2447
>dbj|D83992.1|YSP972HA Fission yeast DNA for ISP4, peptidyl-prolyl cis-trans isomerase, atf1, chromosome II cosmid 1228 sequence Length = 24752 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 ctggtgttaatgaacccttcc 354 ||||||||||||||||||||| Sbjct: 22922 ctggtgttaatgaacccttcc 22902
>ref|NM_115205.1| Arabidopsis thaliana unknown protein AT3G53450 mRNA, complete cds Length = 648 Score = 40.1 bits (20), Expect = 8.9 Identities = 92/116 (79%) Strand = Plus / Minus Query: 511 tcagagtgccttgccatctctgccttcctctggtgcatgtctgccactgccctcacctcc 570 |||||||| || ||||||||||| || || || ||||| ||||| ||||| || || || Sbjct: 332 tcagagtgtctagccatctctgcttttctttgatgcatatctgcaactgctcttacttct 273 Query: 571 cccactgtctcaccgcttatctctggggtcatgagggtcttgggaatgacaccaat 626 || ||||| |||||| | | |||| | |||||| ||||||||||| || ||||| Sbjct: 272 cctactgtttcaccggtcaactctctaggcatgagtgtcttgggaataactccaat 217
>gb|AC168852.2| Mus musculus BAC clone RP24-191L21 from chromosome 6, complete sequence Length = 171677 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ttgccatctctgccttcctc 540 |||||||||||||||||||| Sbjct: 9419 ttgccatctctgccttcctc 9400
>gb|BC072226.1| Xenopus laevis hypothetical protein MGC81455, mRNA (cDNA clone MGC:81455 IMAGE:6636028), complete cds Length = 5120 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggtgttaatgaacccttcct 355 |||||||||||||||||||| Sbjct: 3749 ggtgttaatgaacccttcct 3768
>gb|AF395741.1| Danio rerio exportin 6 mRNA, complete cds Length = 4414 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ttctccatgagctcctccgc 302 |||||||||||||||||||| Sbjct: 3399 ttctccatgagctcctccgc 3380
>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence Length = 194892 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ttgccatctctgccttcctc 540 |||||||||||||||||||| Sbjct: 161608 ttgccatctctgccttcctc 161589
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 523 gccatctctgccttcctctggtgcatgtctgc 554 ||||||||||||||||| || ||||| ||||| Sbjct: 111493 gccatctctgccttcctttgatgcatatctgc 111524
>emb|CR524483.7| Zebrafish DNA sequence from clone DKEY-151P21 in linkage group 15, complete sequence Length = 210342 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 atacaaaacgcacgcacgctcgca 60 ||||||||||||||||||| |||| Sbjct: 143998 atacaaaacgcacgcacgcacgca 143975
>gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence Length = 175485 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gccatctctgccttcctctg 542 |||||||||||||||||||| Sbjct: 7489 gccatctctgccttcctctg 7470
>gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map ve018, complete sequence Length = 80736 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 catgagggtcttgggaatga 619 |||||||||||||||||||| Sbjct: 12836 catgagggtcttgggaatga 12817
>gb|AC004019.20| Homo sapiens Chromosome 22q11.2 BAC Clone 357f7 In CES Region, complete sequence Length = 260409 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 gccatctctgccttcctctg 542 |||||||||||||||||||| Sbjct: 46763 gccatctctgccttcctctg 46744
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 119/152 (78%) Strand = Plus / Minus Query: 430 tggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcct 489 |||||||| ||||||||||| | ||||| || | || ||||||||| || || || ||| Sbjct: 21342206 tggatgcccagctgcgcccacgcgatcacctccaccacctcctccagcgtcccgtaccct 21342147 Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 || || || || | ||| ||||| || ||| |||||||| |||||||||| ||||||| Sbjct: 21342146 cccggcagcgccacgaacgcgtccgacctcctcgccatctccgccttcctctcgtgcatg 21342087 Query: 550 tctgccactgccctcacctcccccactgtctc 581 |||| ||| |||||||||||| ||||| Sbjct: 21342086 ctccccacctcccgcacctcccccaccgtctc 21342055
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atgtaatcacttcgagcagc 468 |||||||||||||||||||| Sbjct: 26755122 atgtaatcacttcgagcagc 26755141
>ref|NM_194374.1| Danio rerio exportin 6 (xpo6), mRNA Length = 4414 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ttctccatgagctcctccgc 302 |||||||||||||||||||| Sbjct: 3399 ttctccatgagctcctccgc 3380
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 626 tgacgtgcctgccgccgtcg 645 |||||||||||||||||||| Sbjct: 8326584 tgacgtgcctgccgccgtcg 8326565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 accgcggccgggctcgccct 171 |||||||||||||||||||| Sbjct: 7102370 accgcggccgggctcgccct 7102389
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038K02 Length = 118635 Score = 40.1 bits (20), Expect = 8.9 Identities = 119/152 (78%) Strand = Plus / Minus Query: 430 tggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcct 489 |||||||| ||||||||||| | ||||| || | || ||||||||| || || || ||| Sbjct: 74585 tggatgcccagctgcgcccacgcgatcacctccaccacctcctccagcgtcccgtaccct 74526 Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 || || || || | ||| ||||| || ||| |||||||| |||||||||| ||||||| Sbjct: 74525 cccggcagcgccacgaacgcgtccgacctcctcgccatctccgccttcctctcgtgcatg 74466 Query: 550 tctgccactgccctcacctcccccactgtctc 581 |||| ||| |||||||||||| ||||| Sbjct: 74465 ctccccacctcccgcacctcccccaccgtctc 74434
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atgtaatcacttcgagcagc 468 |||||||||||||||||||| Sbjct: 98464 atgtaatcacttcgagcagc 98483
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atgtaatcacttcgagcagc 468 |||||||||||||||||||| Sbjct: 17912 atgtaatcacttcgagcagc 17931
>dbj|AK062595.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-C01, full insert sequence Length = 1064 Score = 40.1 bits (20), Expect = 8.9 Identities = 119/152 (78%) Strand = Plus / Minus Query: 430 tggatgccaagctgcgcccatgtaatcacttcgagcagctcctccagtgtaccatagcct 489 |||||||| ||||||||||| | ||||| || | || ||||||||| || || || ||| Sbjct: 512 tggatgcccagctgcgcccacgcgatcacctccaccacctcctccagcgtcccgtaccct 453 Query: 490 ccaggaagggctatgaaggcgtcagagtgccttgccatctctgccttcctctggtgcatg 549 || || || || | ||| ||||| || ||| |||||||| |||||||||| ||||||| Sbjct: 452 cccggcagcgccacgaacgcgtccgacctcctcgccatctccgccttcctctcgtgcatg 393 Query: 550 tctgccactgccctcacctcccccactgtctc 581 |||| ||| |||||||||||| ||||| Sbjct: 392 ctccccacctcccgcacctcccccaccgtctc 361
>gb|AC084323.28| Mus musculus strain C57BL/6J chromosome 2 clone rp23-403l21, complete sequence Length = 188905 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 aggcgtcagagtgccttgcc 525 |||||||||||||||||||| Sbjct: 180778 aggcgtcagagtgccttgcc 180797
>emb|AL833786.8| Mouse DNA sequence from clone RP23-220D12 on chromosome 2, complete sequence Length = 194536 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 aggcgtcagagtgccttgcc 525 |||||||||||||||||||| Sbjct: 99278 aggcgtcagagtgccttgcc 99297
>dbj|AP003115.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1000E4 Length = 115937 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 ctgccttcctctggtgcatg 549 |||||||||||||||||||| Sbjct: 62075 ctgccttcctctggtgcatg 62094 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,781,481 Number of Sequences: 3902068 Number of extensions: 4781481 Number of successful extensions: 97023 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 96471 Number of HSP's gapped (non-prelim): 551 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)