ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branche... 575 e-161
2emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (dr... 432 e-118
3ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 254 3e-64
4dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
5dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 133 8e-28
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
8gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
9gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
10gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, co... 44 0.54
11gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, co... 42 2.1
12gb|AF547699.1| Lysimachia heterogenea internal transcribed space... 42 2.1
13emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, compl... 42 2.1
14gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, co... 42 2.1
15gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 42 2.1
16gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, com... 42 2.1
17gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, com... 42 2.1
18gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, part... 42 2.1
19gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete s... 42 2.1
20gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 42 2.1
21gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H1... 40 8.4
22gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 8.4
23gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.4
24gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, comple... 40 8.4
25gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 8.4
26ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase cla... 40 8.4
27gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complet... 40 8.4
28ref|XM_646450.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.4
29gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.4
30emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22... 40 8.4
31emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 40 8.4
32emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.4
33emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on ch... 40 8.4
34emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 ... 40 8.4
35gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 8.4
36gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 40 8.4
37gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete g... 40 8.4
38gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.4
39gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 ... 40 8.4
40gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, compl... 40 8.4
41gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.4
42gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosom... 40 8.4
43gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complet... 40 8.4
44emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in ... 40 8.4
45gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome... 40 8.4
46emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 8.4
47emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 40 8.4
48gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Canc... 40 8.4
49gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, co... 40 8.4
50gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 40 8.4
51dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.4
52gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, co... 40 8.4 
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  575 bits (290), Expect = e-161
 Identities = 290/290 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atcgatttctttccgtgcccaaatttgaagccgctgatgaccggggcacgtaactttcaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4209 atcgatttctttccgtgcccaaatttgaagccgctgatgaccggggcacgtaactttcaa 4150

                                                                        
Query: 61   attctagcgcgagatatgatcaccatgataattattcacatttgcaaagataatactaaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4149 attctagcgcgagatatgatcaccatgataattattcacatttgcaaagataatactaaa 4090

                                                                        
Query: 121  acaatactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4089 acaatactggatgcttctggcgctgcatgcgcccatgctcttttcctaatcaatcaatca 4030

                                                                        
Query: 181  atcgctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 atcgctaccgtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtc 3970

                                                              
Query: 241  gtgtacaatttcctcgacaacgtgtcttccccagtcctgaactcgtgcct 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3969 gtgtacaatttcctcgacaacgtgtcttccccagtcctgaactcgtgcct 3920



 Score =  385 bits (194), Expect = e-103
 Identities = 215/218 (98%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                        
Query: 397  tcgacctggtagccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggc 456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3612 tcgacctggtagccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggc 3553

                                                                        
Query: 457  aggatggtccctgccgtcgtcgcccggcgtcgcgacggcgccgcccttgacgacgaaaga 516
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 3552 aggatggtccctgccgtcgtcg-ccggcgtcgcgacggcgccgcccttgacgacg-aaga 3495

                                                                        
Query: 517  ggttgcaggaggaggcctcctcgacgtacctcttgtggaccgcgtccaggtacagcacgt 576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3494 ggttgcaggaggaggcctcctcgacgtacctcttgtggaccgcgtccaggtacagcacgt 3435

                                                  
Query: 577  ccgcgaaccccttgctttttcgcgtccatctgcggctt 614
            ||||||||||||||| ||||||||||||||||||||||
Sbjct: 3434 ccgcgaaccccttgc-ttttcgcgtccatctgcggctt 3398



 Score =  232 bits (117), Expect = 1e-57
 Identities = 117/117 (100%)
 Strand = Plus / Minus

                                                                        
Query: 288  ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 3759

                                                                     
Query: 348  gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctg 404
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctg 3702
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>emb|AJ622895.1| Triticum durum partial mRNA for DRP3 protein (drg3 gene)
          Length = 469

 Score =  432 bits (218), Expect = e-118
 Identities = 299/323 (92%), Gaps = 6/323 (1%)
 Strand = Plus / Minus

                                                                       
Query: 288 ccttgtcccttggtaggtgatggtcgacaccggggtgacgccgacggccgttcccgtgca 347
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 469 ccttgtcccttggtaggtgatggtggacaccggggtgacgccgacggccgttcccgtgca 410

                                                                       
Query: 348 gaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctcttcgacctggta 407
           |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaacacttcgtcggcactgacgagatcgtcgatggagacgaggcgctcttcgacctggta 350

                                                                       
Query: 408 gccgtcatccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccc 467
           ||||   || ||||||||||||||||||||||  |||||||| |||||||||||||||||
Sbjct: 349 gccgctgtctctggcgagctcgatgatgctccgacgcgtgacccccggcaggatggtccc 290

                                                                       
Query: 468 tgccgtcgtcgcccggcgtcgcgacggcgccgcccttgacgacgaaagaggttgcaggag 527
             ||||||    ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 289 ctccgtcg----ccggcgtcgcgacggcgccgcccttcacgacg-aagaggttgcaggag 235

                                                                       
Query: 528 gaggcctcctcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaacccc 587
           ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 234 gaggcctcctccacgtacctcttgtggaccgagtccaggtacagcacgtccgcgaacccc 175

                                  
Query: 588 ttgctttttcgcgtccatctgcg 610
           |||| |  |||||||||||||||
Sbjct: 174 ttgc-tcctcgcgtccatctgcg 153
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>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  254 bits (128), Expect = 3e-64
 Identities = 331/397 (83%), Gaps = 5/397 (1%)
 Strand = Plus / Minus

                                                                        
Query: 190  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1232 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1173

                                                                        
Query: 250  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 309
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1172 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1113

                                                                        
Query: 310  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 369
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1112 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1053

                                                                        
Query: 370  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 429
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1052 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 993

                                                                        
Query: 430  atgatgctcctgcgcgtgacacccggcaggatggtccctgccgtcgtcgcccggcgtcgc 489
            |||| |||| |||||||||  |||||||||||||| ||  | ||    | ||||||| ||
Sbjct: 992  atgacgctcttgcgcgtgatccccggcaggatggttcccacggt----ggccggcgtggc 937

                                                                        
Query: 490  gacggcgccgcccttgacgacgaaagaggttgcaggaggaggcctcctcgacgtacctct 549
            |||| ||||| ||||||||| | |||||||||||||||||||||||||| | |||| |||
Sbjct: 936  gacgacgccgtccttgacgatg-aagaggttgcaggaggaggcctcctccaggtacgtct 878

                                                 
Query: 550  tgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
            |||| |||||||| |||||||||||||| | ||||||
Sbjct: 877  tgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 841
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>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
            insert sequence
          Length = 1738

 Score =  254 bits (128), Expect = 3e-64
 Identities = 331/397 (83%), Gaps = 5/397 (1%)
 Strand = Plus / Minus

                                                                        
Query: 190  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1352 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1293

                                                                        
Query: 250  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 309
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1292 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1233

                                                                        
Query: 310  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 369
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1232 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1173

                                                                        
Query: 370  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 429
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1172 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 1113

                                                                        
Query: 430  atgatgctcctgcgcgtgacacccggcaggatggtccctgccgtcgtcgcccggcgtcgc 489
            |||| |||| |||||||||  |||||||||||||| ||  | ||    | ||||||| ||
Sbjct: 1112 atgacgctcttgcgcgtgatccccggcaggatggttcccacggt----ggccggcgtggc 1057

                                                                        
Query: 490  gacggcgccgcccttgacgacgaaagaggttgcaggaggaggcctcctcgacgtacctct 549
            |||| ||||| ||||||||| | |||||||||||||||||||||||||| | |||| |||
Sbjct: 1056 gacgacgccgtccttgacgatg-aagaggttgcaggaggaggcctcctccaggtacgtct 998

                                                 
Query: 550  tgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
            |||| |||||||| |||||||||||||| | ||||||
Sbjct: 997  tgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 961
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>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
            insert sequence
          Length = 1577

 Score =  254 bits (128), Expect = 3e-64
 Identities = 331/397 (83%), Gaps = 5/397 (1%)
 Strand = Plus / Minus

                                                                        
Query: 190  gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
            |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 1347 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 1288

                                                                        
Query: 250  ttcctcgacaacgtgtcttccccagtcctgaactcgtgccttgtcccttggtaggtgatg 309
             ||  ||| |||||||| |  |||||||||||||||| ||||  ||| ||||| || |  
Sbjct: 1287 gtctgcgataacgtgtcatgtccagtcctgaactcgtacctttgcccatggtaagtaaca 1228

                                                                        
Query: 310  gtcgacaccggggtgacgccgacggccgttcccgtgcagaacacttcgtctgcgccgacg 369
             |||| || ||||  ||| | || || ||||| ||||||||||| |||||||||||||| 
Sbjct: 1227 ctcgatactggggcaacgaccaccgctgttccggtgcagaacacctcgtctgcgccgacc 1168

                                                                        
Query: 370  agatcgtcgatggagacgaggcgctcttcgacctggtagccgtcatccctggcgagctcg 429
            |||||||||||||||||||| || ||||| ||||| ||||||   |||||||||||||||
Sbjct: 1167 agatcgtcgatggagacgagccgttcttcaacctgatagccgcggtccctggcgagctcg 1108

                                                                        
Query: 430  atgatgctcctgcgcgtgacacccggcaggatggtccctgccgtcgtcgcccggcgtcgc 489
            |||| |||| |||||||||  |||||||||||||| ||  | ||    | ||||||| ||
Sbjct: 1107 atgacgctcttgcgcgtgatccccggcaggatggttcccacggt----ggccggcgtggc 1052

                                                                        
Query: 490  gacggcgccgcccttgacgacgaaagaggttgcaggaggaggcctcctcgacgtacctct 549
            |||| ||||| ||||||||| | |||||||||||||||||||||||||| | |||| |||
Sbjct: 1051 gacgacgccgtccttgacgatg-aagaggttgcaggaggaggcctcctccaggtacgtct 993

                                                 
Query: 550  tgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
            |||| |||||||| |||||||||||||| | ||||||
Sbjct: 992  tgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 956
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 8e-28
 Identities = 147/172 (85%), Gaps = 5/172 (2%)
 Strand = Plus / Minus

                                                                           
Query: 415     tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgccgtc 474
               ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 6919685 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcccacggtg 6919626

                                                                           
Query: 475     gtcgcccggcgtcgcgacggcgccgcccttgacgacgaaagaggttgcaggaggaggcct 534
               |    ||||||| |||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 6919625 g----ccggcgtggcgacgacgccgtccttgacgatgaa-gaggttgcaggaggaggcct 6919571

                                                                   
Query: 535     cctcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
               |||| | |||| ||||||| |||||||| |||||||||||||| | ||||||
Sbjct: 6919570 cctccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 6919519



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                           
Query: 337     gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 396
               ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 6919915 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 6919856

                       
Query: 397     tcgacctg 404
               || |||||
Sbjct: 6919855 tcaacctg 6919848



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 190     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6920162 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6920103

                                                    
Query: 250     ttcctcgacaacgtgtcttccccagtcctgaactcgt 286
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6920102 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6920066
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 8e-28
 Identities = 147/172 (85%), Gaps = 5/172 (2%)
 Strand = Plus / Minus

                                                                           
Query: 415     tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgccgtc 474
               ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 6917580 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcccacggtg 6917521

                                                                           
Query: 475     gtcgcccggcgtcgcgacggcgccgcccttgacgacgaaagaggttgcaggaggaggcct 534
               |    ||||||| |||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 6917520 g----ccggcgtggcgacgacgccgtccttgacgatgaa-gaggttgcaggaggaggcct 6917466

                                                                   
Query: 535     cctcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
               |||| | |||| ||||||| |||||||| |||||||||||||| | ||||||
Sbjct: 6917465 cctccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 6917414



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                           
Query: 337     gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 396
               ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 6917810 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 6917751

                       
Query: 397     tcgacctg 404
               || |||||
Sbjct: 6917750 tcaacctg 6917743



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                           
Query: 190     gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
               |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 6918057 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 6917998

                                                    
Query: 250     ttcctcgacaacgtgtcttccccagtcctgaactcgt 286
                ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 6917997 gtctgcgataacgtgtcatgtccagtcctgaactcgt 6917961
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score =  133 bits (67), Expect = 8e-28
 Identities = 147/172 (85%), Gaps = 5/172 (2%)
 Strand = Plus / Minus

                                                                          
Query: 415    tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgccgtc 474
              ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 115618 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcccacggtg 115559

                                                                          
Query: 475    gtcgcccggcgtcgcgacggcgccgcccttgacgacgaaagaggttgcaggaggaggcct 534
              |    ||||||| |||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 115558 g----ccggcgtggcgacgacgccgtccttgacgatgaa-gaggttgcaggaggaggcct 115504

                                                                  
Query: 535    cctcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
              |||| | |||| ||||||| |||||||| |||||||||||||| | ||||||
Sbjct: 115503 cctccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 115452



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 337    gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 396
              ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 115848 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 115789

                      
Query: 397    tcgacctg 404
              || |||||
Sbjct: 115788 tcaacctg 115781



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                          
Query: 190    gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
              |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 116095 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 116036

                                                   
Query: 250    ttcctcgacaacgtgtcttccccagtcctgaactcgt 286
               ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 116035 gtctgcgataacgtgtcatgtccagtcctgaactcgt 115999
to top
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score =  133 bits (67), Expect = 8e-28
 Identities = 147/172 (85%), Gaps = 5/172 (2%)
 Strand = Plus / Minus

                                                                         
Query: 415   tccctggcgagctcgatgatgctcctgcgcgtgacacccggcaggatggtccctgccgtc 474
             ||||||||||||||||||| |||| |||||||||  |||||||||||||| ||  | || 
Sbjct: 86282 tccctggcgagctcgatgacgctcttgcgcgtgatccccggcaggatggttcccacggtg 86223

                                                                         
Query: 475   gtcgcccggcgtcgcgacggcgccgcccttgacgacgaaagaggttgcaggaggaggcct 534
             |    ||||||| |||||| ||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 86222 g----ccggcgtggcgacgacgccgtccttgacgatgaa-gaggttgcaggaggaggcct 86168

                                                                 
Query: 535   cctcgacgtacctcttgtggaccgcgtccaggtacagcacgtccgcgaaccc 586
             |||| | |||| ||||||| |||||||| |||||||||||||| | ||||||
Sbjct: 86167 cctccaggtacgtcttgtgcaccgcgtcgaggtacagcacgtcagtgaaccc 86116



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 337   gttcccgtgcagaacacttcgtctgcgccgacgagatcgtcgatggagacgaggcgctct 396
             ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| || |||
Sbjct: 86512 gttccggtgcagaacacctcgtctgcgccgaccagatcgtcgatggagacgagccgttct 86453

                     
Query: 397   tcgacctg 404
             || |||||
Sbjct: 86452 tcaacctg 86445



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 190   gtccatcctttcttgtcctctgccagccccatctggatcgatgtgagagtcgtgtacaat 249
             |||||||||||||||||||| ||||| ||||||||||| || || |||||||||| || |
Sbjct: 86759 gtccatcctttcttgtcctcagccaggcccatctggatggacgtcagagtcgtgtgcagt 86700

                                                  
Query: 250   ttcctcgacaacgtgtcttccccagtcctgaactcgt 286
              ||  ||| |||||||| |  ||||||||||||||||
Sbjct: 86699 gtctgcgataacgtgtcatgtccagtcctgaactcgt 86663
to top
>gb|AC135720.8| Mus musculus chromosome 15, clone RP24-298F20, complete sequence
          Length = 156107

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 511    gaaagaggttgcaggaggaggc 532
              ||||||||||||||||||||||
Sbjct: 105673 gaaagaggttgcaggaggaggc 105652
to top
>gb|AC102532.12| Mus musculus chromosome 12, clone RP23-49D23, complete sequence
          Length = 170606

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 289    cttgtcccttggtaggtgatg 309
              |||||||||||||||||||||
Sbjct: 145103 cttgtcccttggtaggtgatg 145083
to top
>gb|AF547699.1| Lysimachia heterogenea internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 620

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 373 tcgtcgatggagacgaggcgc 393
           |||||||||||||||||||||
Sbjct: 577 tcgtcgatggagacgaggcgc 557
to top
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence
          Length = 191674

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 163    ttcctaatcaatcaatcaatc 183
              |||||||||||||||||||||
Sbjct: 139485 ttcctaatcaatcaatcaatc 139465
to top
>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    cttgtcccttggtaggtgatg 309
              |||||||||||||||||||||
Sbjct: 218890 cttgtcccttggtaggtgatg 218910
to top
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    ttcacatttgcaaagataata 115
             |||||||||||||||||||||
Sbjct: 19225 ttcacatttgcaaagataata 19245
to top
>gb|AC053479.8| Homo sapiens chromosome 8, clone RP11-782A18, complete sequence
          Length = 133053

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 291    tgtcccttggtaggtgatggt 311
              |||||||||||||||||||||
Sbjct: 105733 tgtcccttggtaggtgatggt 105753
to top
>gb|AC091010.5| Homo sapiens chromosome 8, clone RP11-680F23, complete sequence
          Length = 186881

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 291  tgtcccttggtaggtgatggt 311
            |||||||||||||||||||||
Sbjct: 8331 tgtcccttggtaggtgatggt 8351
to top
>gb|AF335476.1| Leishmania tropica ABCA1.2 transporter gene, partial cds
          Length = 5688

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 553  ggaccgcgtccaggtacagca 573
            |||||||||||||||||||||
Sbjct: 2026 ggaccgcgtccaggtacagca 2006
to top
>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence
          Length = 186752

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ttcacatttgcaaagataata 115
             |||||||||||||||||||||
Sbjct: 80468 ttcacatttgcaaagataata 80448
to top
>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 95   ttcacatttgcaaagataata 115
            |||||||||||||||||||||
Sbjct: 3228 ttcacatttgcaaagataata 3208
to top
>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   aatcaatcaatcaatcgcta 187
             ||||||||||||||||||||
Sbjct: 28809 aatcaatcaatcaatcgcta 28828
to top
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    aatcaatcaatcaatcgcta 187
              ||||||||||||||||||||
Sbjct: 645138 aatcaatcaatcaatcgcta 645157
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 1754345 gcgtcgcgacggcgccgccc 1754326
to top
>gb|AC146447.3| Pan troglodytes BAC clone RP43-4N6 from 7, complete sequence
          Length = 200529

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   tcttttcctaatcaatcaatcaat 182
             |||||||||||||||| |||||||
Sbjct: 33695 tcttttcctaatcaatgaatcaat 33718
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 474     cgtcgcccggcgtcgcgacg 493
               ||||||||||||||||||||
Sbjct: 1279847 cgtcgcccggcgtcgcgacg 1279866
to top
>ref|NM_001032492.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 tttcttgtcctctgccagcc 217
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
to top
>gb|AC006966.3| Homo sapiens PAC clone RP4-563H24 from 7, complete sequence
          Length = 101215

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   tcttttcctaatcaatcaatcaat 182
             |||||||||||||||| |||||||
Sbjct: 29235 tcttttcctaatcaatgaatcaat 29212
to top
>ref|XM_646450.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (159.t00004)
           partial mRNA
          Length = 693

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 gaaagaggttgcaggaggag 530
           ||||||||||||||||||||
Sbjct: 339 gaaagaggttgcaggaggag 358
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     ttcctaatcaatcaatcaat 182
               ||||||||||||||||||||
Sbjct: 1678262 ttcctaatcaatcaatcaat 1678281
to top
>emb|AL049565.3|HS751D22 Human DNA sequence from clone RP4-751D22 on chromosome Xq25-26.3,
             complete sequence
          Length = 85538

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   ctcttttcctaatcaatcaa 177
             ||||||||||||||||||||
Sbjct: 54297 ctcttttcctaatcaatcaa 54316
to top
>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    ccatgataattattcacatttgca 106
             |||||||||| |||||||||||||
Sbjct: 54868 ccatgataataattcacatttgca 54891
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 3089238 gcgtcgcgacggcgccgccc 3089219
to top
>emb|AL606831.17| Mouse DNA sequence from clone RP23-432M23 on chromosome 11 Contains the
              5' end of Ntn1 gene for netrin 1, three genes for a novel
              proteins (F730038I15Rik), the 3' end of a novel gene
              (4930535C22Rik) and two CpG islands, complete sequence
          Length = 221455

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    tcctaatcaatcaatcaatc 183
              ||||||||||||||||||||
Sbjct: 212251 tcctaatcaatcaatcaatc 212270
to top
>emb|CR749163.11| Zebrafish DNA sequence from clone CH211-216B21 in linkage group 5,
             complete sequence
          Length = 189369

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   atactaaaacaatactggat 132
             ||||||||||||||||||||
Sbjct: 68759 atactaaaacaatactggat 68740
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    cgacggcgccgcccttgacg 508
              ||||||||||||||||||||
Sbjct: 600857 cgacggcgccgcccttgacg 600876
to top
>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   tttcctaatcaatcaatcaa 181
             ||||||||||||||||||||
Sbjct: 45507 tttcctaatcaatcaatcaa 45526
to top
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome
          Length = 135611

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   gtcgtgtacaatttcctcgacaac 261
             ||||||||||||||| ||||||||
Sbjct: 78558 gtcgtgtacaatttcgtcgacaac 78581
to top
>gb|AF344173.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) gene,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  tttcttgtcctctgccagcc 217
            ||||||||||||||||||||
Sbjct: 2428 tttcttgtcctctgccagcc 2409
to top
>gb|AF344172.1| Ciona intestinalis alcohol dehydrogenase class 3 (Adh3) mRNA,
           complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 tttcttgtcctctgccagcc 217
           ||||||||||||||||||||
Sbjct: 992 tttcttgtcctctgccagcc 973
to top
>gb|AC010290.7| Homo sapiens chromosome 5 clone CTB-125B20, complete sequence
          Length = 238472

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctaaaacaatactggatgct 135
            ||||||||||||||||||||
Sbjct: 6707 ctaaaacaatactggatgct 6726
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     gcgtcgcgacggcgccgccc 502
               ||||||||||||||||||||
Sbjct: 2237864 gcgtcgcgacggcgccgccc 2237845
to top
>gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosome 14, complete sequence
          Length = 152012

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    aatactaaaacaatactgga 131
              ||||||||||||||||||||
Sbjct: 137920 aatactaaaacaatactgga 137939
to top
>gb|AC009469.4| Homo sapiens BAC clone RP11-20N16 from 2, complete sequence
          Length = 168448

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    tcctctgccagccccatctg 224
              ||||||||||||||||||||
Sbjct: 133506 tcctctgccagccccatctg 133487
to top
>emb|BX321894.8| Zebrafish DNA sequence from clone DKEYP-56B7 in linkage group 19,
             complete sequence
          Length = 181789

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   cttttcctaatcaatcaatcaatc 183
             |||||| |||||||||||||||||
Sbjct: 15128 cttttcttaatcaatcaatcaatc 15151
to top
>gb|AC154843.2| Mus musculus BAC clone RP23-58N15 from chromosome 14, complete sequence
          Length = 199716

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   aatactaaaacaatactgga 131
             ||||||||||||||||||||
Sbjct: 10547 aatactaaaacaatactgga 10566
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 480     ccggcgtcgcgacggcgccg 499
               ||||||||||||||||||||
Sbjct: 1275007 ccggcgtcgcgacggcgccg 1274988
to top
>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
             complete sequence
          Length = 179116

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   cttttcctaatcaatcaatcaatc 183
             ||||||| ||||||||||||||||
Sbjct: 89955 cttttccaaatcaatcaatcaatc 89978
to top
>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152586

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tcctctgccagccccatctg 224
              ||||||||||||||||||||
Sbjct: 129010 tcctctgccagccccatctg 129029
to top
>gb|AC137950.16| Mus musculus chromosome 15, clone RP24-356L7, complete sequence
          Length = 182058

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    tcctaatcaatcaatcaatc 183
              ||||||||||||||||||||
Sbjct: 138815 tcctaatcaatcaatcaatc 138834
to top
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  aatcaatcaatcaatcgcta 187
            ||||||||||||||||||||
Sbjct: 7916 aatcaatcaatcaatcgcta 7897
to top
>dbj|AP003327.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-507F16, complete
              sequence
          Length = 188040

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ctaaaacaatactggatgct 135
              ||||||||||||||||||||
Sbjct: 115388 ctaaaacaatactggatgct 115407
to top
>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence
          Length = 153019

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gatggtcgacaccggggtga 325
             ||||||||||||||||||||
Sbjct: 53157 gatggtcgacaccggggtga 53138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,497,603
Number of Sequences: 3902068
Number of extensions: 4497603
Number of successful extensions: 160234
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159411
Number of HSP's gapped (non-prelim): 817
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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