ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-form... 210 2e-54
2UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming... 208 8e-54
3UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-form... 204 2e-52
4UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-formi... 203 3e-52
5PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate p... 33 0.62
6C_MEASI (P26035) Protein C 32 1.1
7CREA_ASPAC (O94166) DNA-binding protein creA (Carbon catabolite ... 32 1.4
8EPHB4_HUMAN (P54760) Ephrin type-B receptor 4 precursor (EC 2.7.... 32 1.8
9C_MEASY (Q00794) Protein C 31 2.3
10BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associa... 31 2.3
11CREA_ASPNG (Q05620) DNA-binding protein creA (Carbon catabolite ... 30 4.0
12CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite ... 30 4.0
13POL_FIVPE (P16088) Pol polyprotein [Contains: Protease (Retropep... 30 5.2
14TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2... 30 5.2
15HIS1_ANASP (Q8YVL0) ATP phosphoribosyltransferase (EC 2.4.2.17) ... 30 5.2
16EPHB4_MOUSE (P54761) Ephrin type-B receptor 4 precursor (EC 2.7.... 30 5.2
17HIS1_ANAVT (Q3M4Z2) ATP phosphoribosyltransferase (EC 2.4.2.17) ... 30 5.2
18LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor 30 6.8
19F26_RANCA (Q91309) 6PF-2-K/Fru-2,6-P2ASE liver/muscle isozymes [... 30 6.8
20F261_HUMAN (P16118) 6-phosphofructo-2-kinase/fructose-2,6-biphos... 30 6.8
21BEM2_ASHGO (Q9HF75) GTPase-activating protein BEM2 29 8.9

>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 1)
           (UPTG 1)
          Length = 365

 Score =  210 bits (535), Expect = 2e-54
 Identities = 98/134 (73%), Positives = 109/134 (81%)
 Frame = -1

Query: 591 GRYDDMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQ 412
           GRYDDMWAGWCTKVI DHL LGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEE+IPFFQ
Sbjct: 232 GRYDDMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQ 291

Query: 411 SVTLSKEATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNPPKGAITTT 232
           + TL KE TTVQ+CYLEL+KQVK KL  +D YF KL +AMVTWIEAWDELN       + 
Sbjct: 292 AATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELNLLGTTWLSC 351

Query: 231 NSPAVKSK*EAVAY 190
            SP V+ + ++  Y
Sbjct: 352 LSPMVQQRLKSRCY 365



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>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Reversibly glycosylated polypeptide)
          Length = 364

 Score =  208 bits (530), Expect = 8e-54
 Identities = 93/120 (77%), Positives = 104/120 (86%)
 Frame = -1

Query: 591 GRYDDMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQ 412
           GRYDDMWAGWC KVI DHL  G+KTGLPYIWHSKASNPFVNLKKEY GIFWQEE+IPFFQ
Sbjct: 235 GRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQ 294

Query: 411 SVTLSKEATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNPPKGAITTT 232
           + TLSK+ T+VQKCY+EL+KQVK KLG +D YF KLADAMVTW+EAWDE+N  K   TT+
Sbjct: 295 AATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEINNNKSEETTS 354



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>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase 2)
           (UPTG 2)
          Length = 366

 Score =  204 bits (519), Expect = 2e-52
 Identities = 91/112 (81%), Positives = 99/112 (88%)
 Frame = -1

Query: 591 GRYDDMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQ 412
           GRYDDMWAGWC KVI DHL LG+KTGLPYIWHSKASNPFVNLKKEY GI+WQEE+IPF Q
Sbjct: 236 GRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQ 295

Query: 411 SVTLSKEATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNP 256
           S TL K+ T+VQ+CYLEL+KQVK KL  +D YF KLADAMVTWIEAWDELNP
Sbjct: 296 SATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNP 347



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>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC|
           2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG)
           (Amylogenin) (Golgi-associated protein se-wap41)
          Length = 364

 Score =  203 bits (516), Expect = 3e-52
 Identities = 90/112 (80%), Positives = 99/112 (88%)
 Frame = -1

Query: 591 GRYDDMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQ 412
           GRYDDMWAGWC KVI DHLSLG+KTGLPYIWHSKASNPFVNLKKEY GIFWQE++IPFFQ
Sbjct: 242 GRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQ 301

Query: 411 SVTLSKEATTVQKCYLELAKQVKAKLGKVDGYFNKLADAMVTWIEAWDELNP 256
           +VT+ K+  TVQKCY+ L+ QVK KLG +D YF KL DAMVTWIEAWDELNP
Sbjct: 302 NVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNP 353



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>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core|
            protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 29/106 (27%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
 Frame = -3

Query: 499  AQQSKQPVCELKEGIQRHLLAG---GADPLLPV----CDPLKGGHHCPEVLP*AGQASEG 341
            A  ++QP      GI   +      G DP L V    C P   G  C +          G
Sbjct: 1091 ASYAQQPAESRVSGISMDVAVPEETGQDPALEVEQCSCPPGYRGPSCQD-------CDTG 1143

Query: 340  EARQGGWLLQ---QAC*CHGHMDRGLGRA*PTKGCNHHHKQPCCEE 212
              R    L     + C CHGH +         +GC HH + P CE+
Sbjct: 1144 YTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEGPRCEQ 1189



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>C_MEASI (P26035) Protein C|
          Length = 186

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +3

Query: 327 PCRASPSLAWPAQGNTSGQWWPPLRGSQTGRRGSAPPARRCR 452
           P R SPS  WP     SG+ W   +  QT +  S PPARR R
Sbjct: 11  PSRPSPSAHWP-----SGKLWQHGQKYQTTQDRSRPPARRRR 47



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>CREA_ASPAC (O94166) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 431

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/57 (40%), Positives = 29/57 (50%)
 Frame = -2

Query: 362 SWPSK*RRSSARWMATSTSLLMPWSHGSRPGTSLTHQRVQSPPQTALL*RASERQ*H 192
           S PS  + +S+  MA+S SLL P   GSRP T    Q +  P +  L  RA  R  H
Sbjct: 39  STPSSAQSTSS--MASSVSLLPPLMKGSRPATEEVRQDLPRPYKCPLCDRAFHRLEH 93



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>EPHB4_HUMAN (P54760) Ephrin type-B receptor 4 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor HTK)
          Length = 987

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
 Frame = +3

Query: 327 PCRASPSLAWPAQGNTSG-----QWWPPLRGSQTGRRGSAPPARRCR-CIPSLSSQTGCL 488
           PC   PS         +G     +W  PL   ++G R     A RCR C P  S      
Sbjct: 319 PCTTPPSAPRSVVSRLNGSSLHLEWSAPL---ESGGREDLTYALRCRECRPGGS------ 369

Query: 489 LCCARCRADQS*YPGSNDQ*SPWCTIQ 569
             CA C  D +  PG  D   PW  ++
Sbjct: 370 --CAPCGGDLTFDPGPRDLVEPWVVVR 394



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>C_MEASY (Q00794) Protein C|
          Length = 186

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +3

Query: 327 PCRASPSLAWPAQGNTSGQWWPPLRGSQTGRRGSAPPARRCR 452
           P R SPS  WP     SG+ W   +  QT +  S PP RR R
Sbjct: 11  PSRPSPSAHWP-----SGKLWQHGQKYQTTQDRSGPPTRRRR 47



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>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2161

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/61 (32%), Positives = 25/61 (40%)
 Frame = +3

Query: 270  PRPRSM*PWHQQAC*SSHPPCRASPSLAWPAQGNTSGQWWPPLRGSQTGRRGSAPPARRC 449
            PRP    P + +A     PP +  P    PAQ +       P RG   G +G  PP R  
Sbjct: 865  PRPLPWPPGNDEAAKMQAPPPKKEPPKEEPAQLSGPEAGRKPARGVGGGGQGPPPPRREN 924

Query: 450  R 452
            R
Sbjct: 925  R 925



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>CREA_ASPNG (Q05620) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 427

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/59 (38%), Positives = 29/59 (49%)
 Frame = -2

Query: 368 TLSWPSK*RRSSARWMATSTSLLMPWSHGSRPGTSLTHQRVQSPPQTALL*RASERQ*H 192
           T S PS  + +S   MA+S SLL P   G+RP T    Q +  P +  L  RA  R  H
Sbjct: 34  TPSTPSSTQSNSN--MASSVSLLPPLMKGARPATEEVRQDLPRPYKCPLCDRAFHRLEH 90



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>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 429

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = -2

Query: 362 SWPSK*RRSSARWMATSTSLLMPWSHGSRPGTSLTHQRVQSPPQTALL*RASERQ*H 192
           S PS  + +S   MA+S SLL P   G+RP T    Q +  P +  L  RA  R  H
Sbjct: 36  STPSSTQSNST--MASSVSLLPPLMKGARPATEEARQDLPRPYKCPLCDRAFHRLEH 90



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>POL_FIVPE (P16088) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
            3.4.23.-); Reverse transcriptase/ribonuclease H (EC
            2.7.7.49) (EC 3.1.26.4) (RT); Deoxyuridine
            5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)
            (dUTPase); Integrase (IN)]
          Length = 1124

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 76   GKKVNFKLQRNGISQFINTNQNTSISVWVAHMNKRTVYVCYCLSLALHS 222
            G K  F +  N  SQ +  N N ++ VW+      T  +   LSLA+HS
Sbjct: 979  GVKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHS 1027



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>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
 Frame = +3

Query: 303 QAC*SSHPPCRASPSLAWPAQGNTSGQWWPPLR---------GSQTGR----RGSAPPAR 443
           QA  +  PP RASP+ A PAQ + +G   PP R         G+  GR    R S   A 
Sbjct: 23  QASPAGTPPGRASPAQASPAQASPAGT--PPGRASPAQASPAGTPPGRASPGRASPAQAS 80

Query: 444 RCRCIPSLSS 473
             R  P+L+S
Sbjct: 81  PARASPALAS 90



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>HIS1_ANASP (Q8YVL0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 214

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 579 DMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKE-YNGIFWQEELIPFFQSVT 403
           D+  G+C   +    S   K+ L    HS+ ++ +VN  +E + G+    E++P + SV 
Sbjct: 87  DLQFGYCRMSVAVKASSPYKSPLDLPAHSRVASKYVNSAREFFQGLDLPVEIVPLYGSVE 146

Query: 402 L 400
           L
Sbjct: 147 L 147



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>EPHB4_MOUSE (P54761) Ephrin type-B receptor 4 precursor (EC 2.7.10.1)|
           (Tyrosine-protein kinase receptor MDK-2) (Developmental
           kinase 2) (Tyrosine kinase MYK-1)
          Length = 987

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
 Frame = +3

Query: 327 PCRASPSLAWPAQGNTSG-----QWWPPLRGSQTGRRGSAPPARRCR-CIPSLSSQTGCL 488
           PC   PS       + +G     +W  PL   ++G R     A RCR C P  S      
Sbjct: 319 PCTTPPSAPRSVVHHLNGSTLRLEWSAPL---ESGGREDLTYAVRCRECRPGGS------ 369

Query: 489 LCCARCRADQS*YPGSNDQ*SPWCTIQ 569
             C  C  D +  PG  D   PW  I+
Sbjct: 370 --CLPCGGDMTFDPGPRDLVEPWVAIR 394



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>HIS1_ANAVT (Q3M4Z2) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)|
           (ATP-PRT)
          Length = 218

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 579 DMWAGWCTKVITDHLSLGIKTGLPYIWHSKASNPFVNLKKE-YNGIFWQEELIPFFQSVT 403
           D+  G+C   +    S   K+ L    HS+ ++ +VN  +E + G+    E++P + SV 
Sbjct: 87  DLQFGYCRMSVAVKASSPYKSPLDLPAHSRVASKYVNSAREFFQGLDLPVEIVPLYGSVE 146

Query: 402 L 400
           L
Sbjct: 147 L 147



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>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 304  C*CHGHMDRGLGRA*PTKGCNHHHKQPCCE 215
            C CHGH DR L  +    GC H+ +   CE
Sbjct: 1865 CQCHGHSDRCLPGSGICVGCQHNTEGDQCE 1894



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>F26_RANCA (Q91309) 6PF-2-K/Fru-2,6-P2ASE liver/muscle isozymes [Includes:|
           6-phosphofructo-2-kinase (EC 2.7.1.105);
           Fructose-2,6-bisphosphatase (EC 3.1.3.46)]
          Length = 470

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 64  GGCPGKKVNFKLQRNGISQFINTNQNTSISVWVAHMNKRTVYVCYCL 204
           GG  G  V  K   + +  FI + Q   + VW +HM KRT+     L
Sbjct: 270 GGDSGLSVRGKQYAHELGNFIKSQQIPDLKVWTSHM-KRTIQTAEAL 315



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>F261_HUMAN (P16118) 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1|
           (6PF-2-K/Fru-2,6-P2ASE liver isozyme) [Includes:
           6-phosphofructo-2-kinase (EC 2.7.1.105);
           Fructose-2,6-bisphosphatase (EC 3.1.3.46)]
          Length = 471

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 64  GGCPGKKVNFKLQRNGISQFINTNQNTSISVWVAHMNKRTVYVCYCLSL 210
           GG  G  V  K     ++ FI +   +S+ VW +HM KRT+     L +
Sbjct: 271 GGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM-KRTIQTAEALGV 318



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>BEM2_ASHGO (Q9HF75) GTPase-activating protein BEM2|
          Length = 2071

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -3

Query: 505 HLAQQSKQPVCELKEGIQRHLLAGGADPLLPVCDPLKGGHHCPEVLP*AGQASEGEARQG 326
           H  QQ +QP    +  +Q  +  G A      C+ +K G  C E +    Q +    R+G
Sbjct: 92  HTQQQQQQP----QTPMQLQVPTGQAHKRTLTCEDMKAGARCEEQVSPCSQPAGSPVRRG 147

Query: 325 GWL 317
           G L
Sbjct: 148 GGL 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,540,646
Number of Sequences: 219361
Number of extensions: 2042994
Number of successful extensions: 6165
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6162
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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