Clone Name | rbasd13h23 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_479089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1407 Score = 420 bits (212), Expect = e-114 Identities = 311/344 (90%) Strand = Plus / Minus Query: 248 ccctttggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagc 307 |||||||||||||| |||| ||||||||||| |||||||||||||||| || || ||| Sbjct: 1111 ccctttggtgggttcagctgatcccaggcctcaatccatgtgaccatggagtcggcgagc 1052 Query: 308 ttgttgaagtagccatccaccttgccgagcttcgccttcacttgcttggccagctcaagg 367 ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 1051 ttgttgaagtagccatcgaccttcccgagcttcgccctcacttgcttggccagctcaagg 992 Query: 368 taacacttctggacagtggtggcctcctttgagagggtcacagactggaagaaggggatc 427 |||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||| Sbjct: 991 taacacttctggacagtgtcggcctccttcgggagggacgcagactggaagaaggggatc 932 Query: 428 agctcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgctt 487 ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| Sbjct: 931 agctcctcctgccagaatatgccgttgtattccttcttgaggttcacaaaggggttgctc 872 Query: 488 gctttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagta 547 ||||||||||||||||||||||| || |||||||||| ||||| | ||| ||||| ||| Sbjct: 871 gctttgctgtgccagatgtagggaaggccagtcttaacacccaaacccaagtgatcggta 812 Query: 548 atcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 811 atcaccttggtgcaccatcctgcccacatatcgtcgtaacgacc 768
>dbj|AK061294.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D01, full insert sequence Length = 1407 Score = 420 bits (212), Expect = e-114 Identities = 311/344 (90%) Strand = Plus / Minus Query: 248 ccctttggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagc 307 |||||||||||||| |||| ||||||||||| |||||||||||||||| || || ||| Sbjct: 1111 ccctttggtgggttcagctgatcccaggcctcaatccatgtgaccatggagtcggcgagc 1052 Query: 308 ttgttgaagtagccatccaccttgccgagcttcgccttcacttgcttggccagctcaagg 367 ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 1051 ttgttgaagtagccatcgaccttcccgagcttcgccctcacttgcttggccagctcaagg 992 Query: 368 taacacttctggacagtggtggcctcctttgagagggtcacagactggaagaaggggatc 427 |||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||| Sbjct: 991 taacacttctggacagtgtcggcctccttcgggagggacgcagactggaagaaggggatc 932 Query: 428 agctcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgctt 487 ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| Sbjct: 931 agctcctcctgccagaatatgccgttgtattccttcttgaggttcacaaaggggttgctc 872 Query: 488 gctttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagta 547 ||||||||||||||||||||||| || |||||||||| ||||| | ||| ||||| ||| Sbjct: 871 gctttgctgtgccagatgtagggaaggccagtcttaacacccaaacccaagtgatcggta 812 Query: 548 atcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 811 atcaccttggtgcaccatcctgcccacatatcgtcgtaacgacc 768
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 371 bits (187), Expect = 2e-99 Identities = 277/307 (90%) Strand = Plus / Minus Query: 248 ccctttggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagc 307 |||||||||||||| |||| ||||||||||| |||||||||||||||| || || ||| Sbjct: 24722643 ccctttggtgggttcagctgatcccaggcctcaatccatgtgaccatggagtcggcgagc 24722584 Query: 308 ttgttgaagtagccatccaccttgccgagcttcgccttcacttgcttggccagctcaagg 367 ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 24722583 ttgttgaagtagccatcgaccttcccgagcttcgccctcacttgcttggccagctcaagg 24722524 Query: 368 taacacttctggacagtggtggcctcctttgagagggtcacagactggaagaaggggatc 427 |||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||| Sbjct: 24722523 taacacttctggacagtgtcggcctccttcgggagggacgcagactggaagaaggggatc 24722464 Query: 428 agctcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgctt 487 ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| Sbjct: 24722463 agctcctcctgccagaatatgccgttgtattccttcttgaggttcacaaaggggttgctc 24722404 Query: 488 gctttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagta 547 ||||||||||||||||||||||| || |||||||||| ||||| | ||| ||||| ||| Sbjct: 24722403 gctttgctgtgccagatgtagggaaggccagtcttaacacccaaacccaagtgatcggta 24722344 Query: 548 atcacct 554 ||||||| Sbjct: 24722343 atcacct 24722337 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 24722235 accttggtgcaccatcctgcccacatatcgtcgtaacgacc 24722195
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 371 bits (187), Expect = 2e-99 Identities = 277/307 (90%) Strand = Plus / Minus Query: 248 ccctttggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagc 307 |||||||||||||| |||| ||||||||||| |||||||||||||||| || || ||| Sbjct: 78580 ccctttggtgggttcagctgatcccaggcctcaatccatgtgaccatggagtcggcgagc 78521 Query: 308 ttgttgaagtagccatccaccttgccgagcttcgccttcacttgcttggccagctcaagg 367 ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 78520 ttgttgaagtagccatcgaccttcccgagcttcgccctcacttgcttggccagctcaagg 78461 Query: 368 taacacttctggacagtggtggcctcctttgagagggtcacagactggaagaaggggatc 427 |||||||||||||||||| ||||||||| | ||||| | |||||||||||||||||||| Sbjct: 78460 taacacttctggacagtgtcggcctccttcgggagggacgcagactggaagaaggggatc 78401 Query: 428 agctcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgctt 487 ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||||| Sbjct: 78400 agctcctcctgccagaatatgccgttgtattccttcttgaggttcacaaaggggttgctc 78341 Query: 488 gctttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagta 547 ||||||||||||||||||||||| || |||||||||| ||||| | ||| ||||| ||| Sbjct: 78340 gctttgctgtgccagatgtagggaaggccagtcttaacacccaaacccaagtgatcggta 78281 Query: 548 atcacct 554 ||||||| Sbjct: 78280 atcacct 78274 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 78172 accttggtgcaccatcctgcccacatatcgtcgtaacgacc 78132
>ref|NM_194076.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1519 Score = 188 bits (95), Expect = 1e-44 Identities = 275/335 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 1147 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 1088 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 1087 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 1028 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 1027 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 968 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 967 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 908 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 ||||||||||| ||||| |||||||| | |||||||||| || ||| || ||||| Sbjct: 907 tgccagatgtacggcagtccagtcttcactcccaggctcaggtggtcacagatgaccttc 848 Query: 557 gtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 847 atgcaccatccagcccacatgtcgtcgtagcgacc 813
>gb|AF294725.1|AF294725 Oryza sativa reversibly glycosylated polypeptide mRNA, complete cds Length = 1136 Score = 188 bits (95), Expect = 1e-44 Identities = 275/335 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 1082 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 1023 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 1022 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 963 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 962 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 903 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 902 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 843 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 ||||||||||| ||||| |||||||| | |||||||||| || ||| || ||||| Sbjct: 842 tgccagatgtacggcagtccagtcttcactcccaggctcaggtggtcacagatgaccttc 783 Query: 557 gtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 782 atgcaccatccagcccacatgtcgtcgtagcgacc 748
>emb|Y18624.1|OSA18624 Oryza sativa mRNA for reversibly glycosylated polypeptide Length = 1384 Score = 188 bits (95), Expect = 1e-44 Identities = 275/335 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 1131 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 1072 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 1071 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 1012 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 1011 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 952 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 951 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 892 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 ||||||||||| ||||| |||||||| | |||||||||| || ||| || ||||| Sbjct: 891 tgccagatgtacggcagtccagtcttcactcccaggctcaggtggtcacagatgaccttc 832 Query: 557 gtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 831 atgcaccatccagcccacatgtcgtcgtagcgacc 797
>dbj|AK098933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029G13, full insert sequence Length = 1492 Score = 188 bits (95), Expect = 1e-44 Identities = 275/335 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 1151 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 1092 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 1091 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 1032 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 1031 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 972 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 971 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 912 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 ||||||||||| ||||| |||||||| | |||||||||| || ||| || ||||| Sbjct: 911 tgccagatgtacggcagtccagtcttcactcccaggctcaggtggtcacagatgaccttc 852 Query: 557 gtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 851 atgcaccatccagcccacatgtcgtcgtagcgacc 817
>dbj|AK061813.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B03, full insert sequence Length = 1509 Score = 188 bits (95), Expect = 1e-44 Identities = 275/335 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 1150 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 1091 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 1090 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 1031 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 1030 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 971 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 970 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 911 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 ||||||||||| ||||| |||||||| | |||||||||| || ||| || ||||| Sbjct: 910 tgccagatgtacggcagtccagtcttcactcccaggctcaggtggtcacagatgaccttc 851 Query: 557 gtgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 850 atgcaccatccagcccacatgtcgtcgtagcgacc 816
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 5e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 22189573 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 22189632 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 22189633 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 22189692 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 22189693 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 22189752 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 22189753 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 22189812 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctca 536 ||||||||||| ||||| |||||||| | |||||||||| Sbjct: 22189813 tgccagatgtacggcagtccagtcttcactcccaggctca 22189852 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 558 tgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 22190001 tgcaccatccagcccacatgtcgtcgtagcgacc 22190034
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 5e-38 Identities = 231/280 (82%) Strand = Plus / Plus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 22182602 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 22182661 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 22182662 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 22182721 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 22182722 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 22182781 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 22182782 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 22182841 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctca 536 ||||||||||| ||||| |||||||| | |||||||||| Sbjct: 22182842 tgccagatgtacggcagtccagtcttcactcccaggctca 22182881 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 558 tgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 22183030 tgcaccatccagcccacatgtcgtcgtagcgacc 22183063
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 167 bits (84), Expect = 5e-38 Identities = 231/280 (82%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct: 35289 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttgacgaag 35230 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 ||| || | ||||||||||||| || | || |||| ||| || ||||| |||||| Sbjct: 35229 taggggtcgatcttgccgagcttctccctgacctgctcggcgagggagaggtagcacttc 35170 Query: 377 tggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctcc 436 ||||| ||| | |||||| | || ||| | ||||||||||||||| | |||||| Sbjct: 35169 tggacggtgtcgcactccttggggatggtggcgttctggaagaaggggatgatgtcctcc 35110 Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| |||||||||||||| |||||||| || |||||||| || |||||| Sbjct: 35109 tgccagaagatgcccttgtattccttcttcaagttcacgaaggggttgctagccttgctg 35050 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctca 536 ||||||||||| ||||| |||||||| | |||||||||| Sbjct: 35049 tgccagatgtacggcagtccagtcttcactcccaggctca 35010 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 558 tgcaccatccagcccacatatcatcgtagcgacc 591 ||||||||||||||||||| || ||||||||||| Sbjct: 34861 tgcaccatccagcccacatgtcgtcgtagcgacc 34828
>emb|AJ011078.1|OSA011078 Oryza sativa mRNA for RGP1 protein Length = 1310 Score = 159 bits (80), Expect = 1e-35 Identities = 155/180 (86%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 980 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtattccttcttcaagtt 921 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||| || |||||||| || ||||||||||||||||| ||||| |||||||| | ||||| Sbjct: 920 cacgaaggggttgctagccttgctgtgccagatgtacggcagtccagtcttcactcccag 861 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 ||||| || ||| || ||||| ||||||||||||||||||| || ||||||||||| Sbjct: 860 gctcaggtggtcacagatgaccttcatgcaccatccagcccacatgtcgtcgtagcgacc 801 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttg 310 ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 1136 gggttcagctcatcccaggcctcgatccaggtgaccatggcatcggcaagcttg 1083
>emb|AJ292078.1|GHI292078 Gossypium hirsutum mRNA for reversibly glycosylated polypeptide (rgp1 gene) Length = 1331 Score = 147 bits (74), Expect = 5e-32 Identities = 266/330 (80%) Strand = Plus / Minus Query: 256 tgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 |||||| || || ||||| || || |||||||| ||||| ||||| || ||||| ||||| Sbjct: 1085 tgggttcagttcatcccaagcttcaatccatgtcaccatagcatccgccagcttattgaa 1026 Query: 316 gtagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacactt 375 |||| |||| ||||||||||| ||||||||||||||||||| | ||| | ||| || || Sbjct: 1025 gtagtcatcgaccttgccgagtttcgccttcacttgcttggagatctcgatgtagcattt 966 Query: 376 ctggacagtggtggcctcctttgagagggtcacagactggaagaaggggatcagctcctc 435 ||| || |||||| ||||| | |||| || || |||||||| || |||| ||| || Sbjct: 965 ctgtacggtggtgcagtccttcggaagggcaacggattggaagaaaggaatcaactcttc 906 Query: 436 ctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgct 495 |||||| | || || |||||||| ||||| | |||||||||||||||||| |||||||| Sbjct: 905 ttgccagtaaattcctttgtattctttcttaaggttcacaaacgggttgctcgctttgct 846 Query: 496 gtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcacctt 555 |||||| |||||||| || || ||||| | ||| | | |||||| ||| ||||| Sbjct: 845 gtgccaaatgtagggaagtccggtcttcactccccatccgaggtgatcacaaataacctt 786 Query: 556 ggtgcaccatccagcccacatatcatcgta 585 ||||||||| |||||||||||||||||||| Sbjct: 785 ggtgcaccagccagcccacatatcatcgta 756
>ref|NM_111090.2| Arabidopsis thaliana RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1) AT3G02230 (RGP1) mRNA, complete cds Length = 1385 Score = 137 bits (69), Expect = 5e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 431 tcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgct 490 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 952 tcctcctgccagaagattcccttgtactccttcttcaagttcacaaacgggttgctggct 893 Query: 491 ttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatc 550 |||||||| | |||||||||| ||| ||||| | |||| | |||||| ||| ||| Sbjct: 892 ttgctgtggtaaatgtagggcaaacctgtcttcactcccaatcccaaatggtcacagatc 833 Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 832 accttgatacaccatccagcccacatatcgtcgtagcgacc 792 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 254 ggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||||| Sbjct: 1129 ggtgggttaagctcatcccaagcttcaatccaagtgaccatagcatctgcaagcttgt 1072
>gb|BT008841.1| Arabidopsis thaliana At3g02230 mRNA, complete cds Length = 1074 Score = 137 bits (69), Expect = 5e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 431 tcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgct 490 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 884 tcctcctgccagaagattcccttgtactccttcttcaagttcacaaacgggttgctggct 825 Query: 491 ttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatc 550 |||||||| | |||||||||| ||| ||||| | |||| | |||||| ||| ||| Sbjct: 824 ttgctgtggtaaatgtagggcaaacctgtcttcactcccaatcccaaatggtcacagatc 765 Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 764 accttgatacaccatccagcccacatatcgtcgtagcgacc 724 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 254 ggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||||| Sbjct: 1061 ggtgggttaagctcatcccaagcttcaatccaagtgaccatagcatctgcaagcttgt 1004
>gb|BT002409.1| Arabidopsis thaliana reversibly glycosylated polypeptide-1 (At3g02230) mRNA, complete cds Length = 1374 Score = 137 bits (69), Expect = 5e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 431 tcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgct 490 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 955 tcctcctgccagaagattcccttgtactccttcttcaagttcacaaacgggttgctggct 896 Query: 491 ttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatc 550 |||||||| | |||||||||| ||| ||||| | |||| | |||||| ||| ||| Sbjct: 895 ttgctgtggtaaatgtagggcaaacctgtcttcactcccaatcccaaatggtcacagatc 836 Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 835 accttgatacaccatccagcccacatatcgtcgtagcgacc 795 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 254 ggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||||| Sbjct: 1132 ggtgggttaagctcatcccaagcttcaatccaagtgaccatagcatctgcaagcttgt 1075
>gb|AF013627.1|AF013627 Arabidopsis thaliana reversibly glycosylated polypeptide-1 (AtRGP) mRNA, complete cds Length = 1393 Score = 137 bits (69), Expect = 5e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 431 tcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgct 490 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 955 tcctcctgccagaagattcccttgtactccttcttcaagttcacaaacgggttgctggct 896 Query: 491 ttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatc 550 |||||||| | |||||||||| ||| ||||| | |||| | |||||| ||| ||| Sbjct: 895 ttgctgtggtaaatgtagggcaaacctgtcttcactcccaatcccaaatggtcacagatc 836 Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 835 accttgatacaccatccagcccacatatcgtcgtagcgacc 795 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 254 ggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||||| Sbjct: 1132 ggtgggttaagctcatcccaagcttcaatccaagtgaccatagcatctgcaagcttgt 1075
>gb|AY622990.1| Lycopersicon esculentum UDP-glucose:protein transglucosylase-like protein SlUPTG1 mRNA, complete cds Length = 1398 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || | ||| Sbjct: 910 ctggaagaaggggatgatctcctcttgccagaagataccgttgtactcctttttgaggtt 851 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| |||||||||||||| |||||||||||||||||||| || || || Sbjct: 850 aacgaatgggttgctagctttgctgtgccatatgtagggcagaccagtcttgattcctag 791 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 | |||||| ||| || |||||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 790 tcccaaatggtcacatatgaccttggtacaccagccggcccacatatcgtcgtaacgacc 731 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatc 300 ||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 1065 gggttaagctcatcccaagcttcgatccacgtgaccatagcatc 1022
>gb|BT012716.1| Lycopersicon esculentum clone 113599F, mRNA sequence Length = 1413 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||| ||||||||||| |||||||| ||||| || | ||| Sbjct: 928 ctggaagaaggggatgatctcctcttgccagaagataccgttgtactcctttttgaggtt 869 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| |||||||||||||| |||||||||||||||||||| || || || Sbjct: 868 aacgaatgggttgctagctttgctgtgccatatgtagggcagaccagtcttgattcctag 809 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 | |||||| ||| || |||||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 808 tcccaaatggtcacatatgaccttggtacaccagccggcccacatatcgtcgtaacgacc 749 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatc 300 ||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 1083 gggttaagctcatcccaagcttcgatccacgtgaccatagcatc 1040
>emb|AJ843986.1| Plantago major partial mRNA for hypothetical protein Length = 877 Score = 133 bits (67), Expect = 7e-28 Identities = 151/179 (84%) Strand = Plus / Minus Query: 407 acagactggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttcttt 466 |||||||||||||| ||||| | ||||| |||||| ||||||| |||||||||||||| Sbjct: 462 acagactggaagaacgggatgatttcctcttgccagtagatgcccttgtattccttcttc 403 Query: 467 aagttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaata 526 | ||| ||||| |||||||| || ||||||||||||||||| || || || ||||| | Sbjct: 402 aggttgacaaatgggttgctagccttgctgtgccagatgtatggtagccctgtcttgact 343 Query: 527 cccaggctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgta 585 || || | ||| |||||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 342 ccaagacccaagtgatcagtgatcaccttagtgcaccaaccagcccacatatcgtcgta 284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 256 tgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 |||||| ||||||||||| || || ||||| |||||||| |||||| ||||||| | ||| Sbjct: 613 tgggttgagctcgtcccatgcttcaatccaggtgaccatagcatcaccaagcttctcgaa 554 Query: 316 gta 318 ||| Sbjct: 553 gta 551
>gb|BT017085.1| Zea mays clone EL01N0360E12.c mRNA sequence Length = 1383 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 977 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtattccttcttcaagtt 918 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| || ||||||||||||||||| ||||| |||||||| | ||||| Sbjct: 917 aacgaaggggttgctagccttgctgtgccagatgtatggcaggccagtcttgactcccag 858 Query: 532 gctca 536 ||||| Sbjct: 857 gctca 853 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttg 310 ||||| ||||| ||||||||||||||||| ||||||||||| ||| | |||||| Sbjct: 1132 gggttcagctcatcccaggcctcgatccaggtgaccatggcgtcaccgagcttg 1079
>gb|AY111237.1| Zea mays CL1948_1 mRNA sequence Length = 1481 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 984 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtattccttcttcaagtt 925 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| || ||||||||||||||||| ||||| |||||||| | ||||| Sbjct: 924 aacgaaggggttgctagccttgctgtgccagatgtatggcaggccagtcttgactcccag 865 Query: 532 gctca 536 ||||| Sbjct: 864 gctca 860 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttg 310 ||||| ||||| ||||||||||||||||| ||||||||||| ||| | |||||| Sbjct: 1139 gggttcagctcatcccaggcctcgatccaggtgaccatggcgtcaccgagcttg 1086
>gb|U89897.1|ZMU89897 Zea mays golgi associated protein se-wap41 mRNA, complete cds Length = 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1013 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtattccttcttcaagtt 954 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| || ||||||||||||||||| ||||| |||||||| | ||||| Sbjct: 953 aacgaaggggttgctagccttgctgtgccagatgtatggcaggccagtcttgactcccag 894 Query: 532 gctca 536 ||||| Sbjct: 893 gctca 889 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttg 310 ||||| ||||| ||||||||||||||||| ||||||||||| ||| | |||||| Sbjct: 1168 gggttcagctcatcccaggcctcgatccaggtgaccatggcgtcaccgagcttg 1115
>emb|Y18626.1|TAE18626 Triticum aestivum mRNA for reversibly glycosylated polypeptide Length = 1393 Score = 127 bits (64), Expect = 4e-26 Identities = 151/180 (83%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 981 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtactctttcttcaagtt 922 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || ||| |||||||| || ||||||||||| | ||| ||||| |||||||| | || || Sbjct: 921 cagaaatgggttgctagccttgctgtgccacaggtatggcagcccagtcttcactccaag 862 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || || || |||||| |||||||||||||||||| |||||||||||||| Sbjct: 861 gctcaagtggtcgcagatgaccttgacgcaccatccagcccacatgtcatcgtagcgacc 802 Score = 91.7 bits (46), Expect = 2e-15 Identities = 52/54 (96%) Strand = Plus / Minus Query: 256 tgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagctt 309 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1137 tgggttcagctcgtcccaggcctcgatccaggtgaccatggcatcagcaagctt 1084
>emb|AJ223252.2|SOT223252 Solanum tuberosum mRNA for UDP-glucose:protein transglucosylase (uptg1 gene) Length = 1392 Score = 127 bits (64), Expect = 4e-26 Identities = 151/180 (83%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||| ||||||||||| || ||||| ||||| || | ||| Sbjct: 904 ctggaagaaggggatgatctcctcttgccagaagataccattgtactcctttttgaggtt 845 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| |||||||||||||| |||||||||||||||||||| || || || Sbjct: 844 aacgaatgggttgctagctttgctgtgccaaatgtagggcagaccagtcttgattcctag 785 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 | |||||| ||| || |||||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 784 tcccaaatggtcacatatgaccttggtacaccagccggcccacatatcgtcgtaacgacc 725 Score = 48.1 bits (24), Expect = 0.033 Identities = 36/40 (90%) Strand = Plus / Minus Query: 258 ggttaagctcgtcccaggcctcgatccatgtgaccatggc 297 |||| ||||| ||||| || |||||||||||||||||||| Sbjct: 1058 ggttgagctcatcccaagcttcgatccatgtgaccatggc 1019
>gb|AY112484.1| Zea mays CL1948_2 mRNA sequence Length = 758 Score = 123 bits (62), Expect = 7e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 262 ctggaagaaggggatgatgtcctcctgccagaagatgcccttgtattccttcttcaagtt 203 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 || || |||||||| || ||||||||||||||||| |||| |||||||| | ||||| Sbjct: 202 aacgaaggggttgctagccttgctgtgccagatgtatggcaagccagtcttgactcccag 143 Query: 532 gctcaa 537 |||||| Sbjct: 142 gctcaa 137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 263 agctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttg 310 ||||| ||||||||||||||||| ||||||||||| ||| | |||||| Sbjct: 411 agctcatcccaggcctcgatccaggtgaccatggcgtcaccgagcttg 364
>ref|NM_121569.2| Arabidopsis thaliana RGP2; alpha-1,4-glucan-protein synthase (UDP-forming) AT5G15650 (RGP2) mRNA, complete cds Length = 1530 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 949 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 890 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 889 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 830 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 829 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 770 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1108 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1050
>gb|DQ207853.1| Solanum tuberosum clone 075G08 UDP-glucose:protein transglucosylase-like mRNA, complete cds Length = 1244 Score = 111 bits (56), Expect = 3e-21 Identities = 152/184 (82%) Strand = Plus / Minus Query: 408 cagactggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttcttta 467 |||||||||| || || || | |||||| |||||| ||||||| ||||| ||||| || | Sbjct: 912 cagactggaaaaatggaatgatctcctcttgccagtagatgcctttgtactcctttttaa 853 Query: 468 agttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatac 527 ||| ||||| ||||||||||||||||||||||| |||||||| | ||||||||| | || Sbjct: 852 ggttaacaaaggggttgcttgctttgctgtgccatatgtagggtaaaccagtcttgacac 793 Query: 528 ccaggctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagc 587 | || | |||||| || ||||||||| | ||||| |||||||||||||| ||||| | Sbjct: 792 cgagtcccaaatggtcgcatatcaccttgatacaccaaccagcccacatatcgtcgtatc 733 Query: 588 gacc 591 |||| Sbjct: 732 gacc 729 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 263 agctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 ||||| |||||||| || ||||||||||||||||||||||| |||||| |||| Sbjct: 1057 agctcatcccaggcttcaatccatgtgaccatggcatcagctagcttggtgaa 1005
>gb|AY120691.1| Arabidopsis thaliana AT5g15650/F14F8_30 mRNA, complete cds Length = 1083 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 903 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 844 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 843 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 784 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 783 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 724 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1062 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1004
>gb|AY039846.1| Arabidopsis thaliana AT5g15650/F14F8_30 mRNA, complete cds Length = 1411 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 950 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 891 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 890 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 831 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 830 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 771 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1109 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1051
>emb|BX830946.1|CNS09YLX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1351 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 933 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 874 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 873 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 814 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 813 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 754 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1092 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1034
>gb|AY087476.1| Arabidopsis thaliana clone 35863 mRNA, complete sequence Length = 1396 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 951 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 892 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 891 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 832 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 831 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1110 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1052
>gb|AF013628.1|AF013628 Arabidopsis thaliana reversibly glycosylated polypeptide-2 (AtRGP) mRNA, complete cds Length = 1401 Score = 111 bits (56), Expect = 3e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 924 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 865 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 864 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 805 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 804 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 745 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1083 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1025
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 431 tcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgct 490 ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 57767 tcctcctgccagaagattcccttgtactccttcttcaagttcacaaacgggttgctggct 57826 Query: 491 ttgctgtgccagatgtagggcagaccagtctt 522 |||||||| | |||||||||| ||| ||||| Sbjct: 57827 ttgctgtggtaaatgtagggcaaacctgtctt 57858 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 254 ggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||||| Sbjct: 57590 ggtgggttaagctcatcccaagcttcaatccaagtgaccatagcatctgcaagcttgt 57647 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | |||||||||||||||||||| ||||||||||| Sbjct: 57972 accttgatacaccatccagcccacatatcgtcgtagcgacc 58012
>emb|BX830856.1|CNS09ZF4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1348 Score = 103 bits (52), Expect = 6e-19 Identities = 148/180 (82%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 927 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 868 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||| ||| ||||||||||| |||| || || | ||| ||||| | |||| Sbjct: 867 aacaaaagggtcgctcgctttgctgtggtagatatacggtaaaccggtcttcactcccaa 808 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 807 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 748 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1086 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1028
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||||||||| | ||| ||||||||||| ||||| |||||||||||||| | ||| Sbjct: 27416 ctggaagaaggggatgatctcttcctgccagaaaatgcctttgtattccttcttcaggtt 27357 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 ||| || |||||||| || |||||||| ||||||| |||||||| ||||| Sbjct: 27356 cacgaatgggttgctcgccttgctgtggtagatgtatggcagacccgtctt 27306 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccat 294 ||||||||||||||||| || | |||||| |||||||| Sbjct: 27571 gggttaagctcgtcccatgcttggatccaagtgaccat 27534 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 caccatccagcccacatatcatcgtagcg 588 ||||| |||||||||||||| |||||||| Sbjct: 27178 caccaaccagcccacatatcgtcgtagcg 27150
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 101 bits (51), Expect = 3e-18 Identities = 96/111 (86%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| ||||| | ||| ||||||||||| ||||| |||||||||||||| | ||| Sbjct: 4462 ctggaagaaagggatgatctcttcctgccagaaaatgcccttgtattccttcttcaggtt 4403 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || |||||||| |||||||| ||||||||||||| || ||||| Sbjct: 4402 cacaaagggattgcttgccttgctgtggtagatgtagggcaggcccgtctt 4352 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 256 tgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 |||||||||||||||||| || |||||||| ||||||||||| || | ||||||| ||| Sbjct: 4618 tgggttaagctcgtcccaagcttcgatccaagtgaccatggcctctgacagcttgtcgaa 4559 Query: 316 gtag 319 |||| Sbjct: 4558 gtag 4555 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 caccatccagcccacatatcatcgtagcg 588 ||||| |||||||||||||| |||||||| Sbjct: 4230 caccacccagcccacatatcgtcgtagcg 4202
>emb|AJ310910.1|STU310910 Solanum tuberosum mRNA for UDP-Glucose:protein transglucosylase (uptg2 gene) Length = 1303 Score = 99.6 bits (50), Expect = 1e-17 Identities = 134/162 (82%) Strand = Plus / Minus Query: 430 ctcctcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgc 489 |||||| |||||| ||||||| ||||| ||||| || | ||| ||||| ||||||||||| Sbjct: 901 ctcctcttgccagtagatgcctttgtactcctttttaaggttaacaaaggggttgcttgc 842 Query: 490 tttgctgtgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaat 549 |||||||||||| |||||||| | ||||||||| | ||| || | |||||| || || Sbjct: 841 tttgctgtgccatatgtagggtaaaccagtcttgacaccgagtcccaaatggtcgcatat 782 Query: 550 caccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| | ||||| |||||||||||||| ||||| ||||| Sbjct: 781 gaccttgatacaccaaccagcccacatatcgtcgtatcgacc 740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 263 agctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 ||||| |||||||| || ||||||||||||||||||||||| |||||| |||| Sbjct: 1068 agctcatcccaggcttcaatccatgtgaccatggcatcagctagcttggtgaa 1016
>emb|BX831174.1|CNS09ZDG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS64ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 95.6 bits (48), Expect = 2e-16 Identities = 147/180 (81%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||| ||||||| || |||||||||||||| | ||| Sbjct: 937 ctggaagaacggaatgatctcctcctgcgagaagattcccttgtattccttcttcaggtt 878 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtcttaatacccag 531 ||||| |||||||| ||||||||||| |||| || || | ||| ||||| | || | Sbjct: 877 aacaaaagggttgctcgctttgctgtggtagatatacggtaaaccggtcttcactccaaa 818 Query: 532 gctcaaatgatcagtaatcaccttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| || ||| ||||||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 817 gctcaagtggtcacagatcaccttgatgcaccaaccagcccacatatcgtcgtaacgacc 758 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 1096 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 1038
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| ||||| | ||| || |||||||| ||||| |||||||||||||| | ||| Sbjct: 22443 ctggaagaatgggattatctcttcttgccagaaaatgcctttgtattccttcttcaggtt 22384 Query: 472 cacaaacgggttgcttgctttgctgtgccagatgtagggca 512 ||||||||||||||| || |||||||| | |||||||||| Sbjct: 22383 cacaaacgggttgctcgccttgctgtggtaaatgtagggca 22343 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 256 tgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 |||||||||||| ||||| |||||||||||||||||||| || || | |||||||| Sbjct: 22599 tgggttaagctcatcccaagcctcgatccatgtgaccatagcttctgaaagcttgt 22544 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 559 gcaccatccagcccacatatcatcgtagcg 588 |||||| |||||||||||||| |||||||| Sbjct: 22189 gcaccaaccagcccacatatcgtcgtagcg 22160
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project) Length = 96892 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 412 ctggaagaaggggatcagctcctcctgccagaagatgccgttgtattccttctttaagtt 471 ||||||||| || || | |||||||||||||||||| || |||||||||||||| | ||| Sbjct: 9515 ctggaagaacggaatgatctcctcctgccagaagattcccttgtattccttcttcaggtt 9456 Query: 472 cacaaacgggttgcttgctttgctgtg 498 ||||| |||||||| ||||||||||| Sbjct: 9455 aacaaaagggttgctcgctttgctgtg 9429 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 253 tggtgggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgt 311 ||||||||||||||| ||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 9674 tggtgggttaagctcatcccaagcttcaatccatgtaaccatggcatctgcaagcttgt 9616 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 551 accttggtgcaccatccagcccacatatcatcgtagcgacc 591 |||||| ||||||| |||||||||||||| ||||| ||||| Sbjct: 9269 accttgatgcaccaaccagcccacatatcgtcgtaacgacc 9229
>gb|AF005279.1|AF005279 Vigna unguiculata type IIIa membrane protein cp-wap13 mRNA, complete cds Length = 1275 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||||||||| ||||| ||||| || | |||||||| |||||||||||||||||| Sbjct: 941 tgccagaagatgcctttgtactcctttttcagattcacaaatgggttgcttgctttgctg 882 Query: 497 tgccagatgtagggcagaccagtctt 522 ||||| ||||| || || |||||||| Sbjct: 881 tgccatatgtatgggagtccagtctt 856 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 259 gttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaagta 318 |||||| || ||||| || || ||||| |||||||||||||| ||||||||||||||||| Sbjct: 1119 gttaagttcatcccaagcttcaatccaagtgaccatggcatctgcaagcttgttgaagta 1060
>ref|NM_180213.1| Arabidopsis thaliana unknown protein AT3G08890 transcript variant AT3G08890.2 mRNA, complete cds Length = 966 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 434 tcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttg 493 |||||||| || || |||||||||||||| || | |||||| || |||||||| |||||| Sbjct: 786 tcctgccaaaatattccgttgtattcctttttcaggttcacgaatgggttgctggctttg 845 Query: 494 ctgtgccagatgtagggcagaccagtctt 522 |||||||| ||||| |||| ||| ||||| Sbjct: 846 ctgtgccatatgtaaggcaaacccgtctt 874
>ref|NM_111724.2| Arabidopsis thaliana RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); alpha-1,4-glucan-protein synthase (UDP-forming) AT3G08900 (RGP3) mRNA, complete cds Length = 1350 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 434 tcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttg 493 |||||||| || || |||||||||||||| || | |||||| || |||||||| |||||| Sbjct: 869 tcctgccaaaatattccgttgtattcctttttcaggttcacgaatgggttgctggctttg 810 Query: 494 ctgtgccagatgtagggcagaccagtctt 522 |||||||| ||||| |||| ||| ||||| Sbjct: 809 ctgtgccatatgtaaggcaaacccgtctt 781
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 434 tcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttg 493 |||||||| || || |||||||||||||| || | |||||| || |||||||| |||||| Sbjct: 47977 tcctgccaaaatattccgttgtattcctttttcaggttcacgaatgggttgctggctttg 47918 Query: 494 ctgtgccagatgtagggcagaccagtctt 522 |||||||| ||||| |||| ||| ||||| Sbjct: 47917 ctgtgccatatgtaaggcaaacccgtctt 47889
>gb|AF034255.2|AF034255 Arabidopsis thaliana reversibly glycosylated polypeptide-3 (RGP) mRNA, complete cds Length = 1374 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 434 tcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttg 493 |||||||| || || |||||||||||||| || | |||||| || |||||||| |||||| Sbjct: 893 tcctgccaaaatattccgttgtattcctttttcaggttcacgaatgggttgctggctttg 834 Query: 494 ctgtgccagatgtagggcagaccagtctt 522 |||||||| ||||| |||| ||| ||||| Sbjct: 833 ctgtgccatatgtaaggcaaacccgtctt 805
>dbj|AK118676.1| Arabidopsis thaliana At3g08900 mRNA for putative reversibly glycosylated polypeptide-3 (RGP), complete cds, clone: RAFL19-94-P04 Length = 901 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 434 tcctgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttg 493 |||||||| || || |||||||||||||| || | |||||| || |||||||| |||||| Sbjct: 449 tcctgccaaaatattccgttgtattcctttttcaggttcacgaatgggttgctggctttg 390 Query: 494 ctgtgccagatgtagggcagaccagtctt 522 |||||||| ||||| |||| ||| ||||| Sbjct: 389 ctgtgccatatgtaaggcaaacccgtctt 361
>gb|AF005278.1|AF005278 Vigna unguiculata type IIIa membrane protein cp-wap11 mRNA, complete cds Length = 1461 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 |||||||| ||||| ||||| || ||| | | ||||||||| |||||||| || |||||| Sbjct: 932 tgccagaatatgcctttgtactctttcctcaggttcacaaatgggttgctggccttgctg 873 Query: 497 tgccagatgtagggcagaccagtcttaatacccaggctcaaatgatcagtaatcaccttg 556 || |||| || |||| ||||||||| || |||| | ||| |||||| || |||||| Sbjct: 872 tgatagatataaggcaaaccagtcttgattcccaatcccaagtgatcacagattaccttg 813 Query: 557 gtgcaccatccagcccacatatcatcgtagcg 588 |||||| ||||||||||| ||||||||||| Sbjct: 812 cagcaccaaccagcccacatgtcatcgtagcg 781
>gb|AF286271.1|AF286271 Lycopersicon esculentum putative Golgi-associated protein mRNA, partial cds Length = 439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaa 315 ||||| ||||| |||||||| || |||||||| |||||||||||||| |||||| |||| Sbjct: 202 gggttgagctcatcccaggcttcaatccatgtcaccatggcatcagccagcttggtgaa 144
>gb|U31565.1|PSU31565 Pisum sativum reversibly glycosylatable polypeptide (RGP1) mRNA, complete cds Length = 1298 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 437 tgccagaagatgccgttgtattccttctttaagttcacaaacgggttgcttgctttgctg 496 ||||||||||| || ||||| ||||| || | || ||||| |||||||||||||||||| Sbjct: 878 tgccagaagatacctttgtactcctttttcagattaacaaatgggttgcttgctttgctg 819 Query: 497 tgccagatgta 507 ||||| ||||| Sbjct: 818 tgccaaatgta 808 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 558 tgcaccatccagcccacatatcatcgtagcg 588 |||||||||||||||||||||| |||||||| Sbjct: 757 tgcaccatccagcccacatatcgtcgtagcg 727
>gb|AY389569.1| Hyacinthus orientalis reversibly glycosylated polypeptide (RGP) mRNA, partial cds Length = 642 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 558 tgcaccatccagcccacatatcatcgtagcg 588 |||||||||||||||||||||| |||||||| Sbjct: 591 tgcaccatccagcccacatatcgtcgtagcg 561
>gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, partial sequence Length = 106592 Score = 54.0 bits (27), Expect = 5e-04 Identities = 105/131 (80%) Strand = Plus / Plus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatcagcaagcttgttgaag 316 ||||||||||| ||||| || || ||||| |||||||||||||| || | ||||| ||| Sbjct: 48076 gggttaagctcatcccaagcttcaatccaagtgaccatggcatctgccaacttgtcaaag 48135 Query: 317 tagccatccaccttgccgagcttcgccttcacttgcttggccagctcaaggtaacacttc 376 || ||| | |||| ||||| |||| ||||||||||| ||| ||| ||| |||||| Sbjct: 48136 taaggatctatcttggaaagcttttccttgacttgcttggcaagcacaatgtagcacttc 48195 Query: 377 tggacagtggt 387 || |||||||| Sbjct: 48196 tgaacagtggt 48206 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 559 gcaccatccagcccacatatcatcgtagcg 588 |||||| ||||||||||| ||||||||||| Sbjct: 48485 gcaccagccagcccacatgtcatcgtagcg 48514
>dbj|AB154534.1| Cucumis melo 8C01 mRNA for hypothetical protein, partial cds Length = 395 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtaggg 510 |||||| || |||||||| |||||||||||||| |||||||| Sbjct: 382 gttcacgaatgggttgctggctttgctgtgccatatgtaggg 341
>emb|AJ538673.1|NTA538673 Nicotiana tabacum cDNA-AFLP-fragment BC4-M12-032 Length = 182 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 257 gggttaagctcgtcccaggcctcgatccatgtgaccatggcatc 300 ||||| ||||| |||||||| || |||||||| ||||||||||| Sbjct: 47 gggttgagctcatcccaggcttcaatccatgtaaccatggcatc 4
>ref|NM_111271.2| Arabidopsis thaliana oxidoreductase AT3G04000 mRNA, complete cds Length = 1056 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 tagccatccaccttgccgagctt 339 ||||||||||||||||||||||| Sbjct: 95 tagccatccaccttgccgagctt 117
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 tagccatccaccttgccgagctt 339 ||||||||||||||||||||||| Sbjct: 32235 tagccatccaccttgccgagctt 32257
>gb|AY045807.1| Arabidopsis thaliana putative short-chain type dehydrogenase/reductase (At3g04000) mRNA, partial cds Length = 994 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 tagccatccaccttgccgagctt 339 ||||||||||||||||||||||| Sbjct: 16 tagccatccaccttgccgagctt 38
>gb|BT002321.1| Arabidopsis thaliana clone C105461 putative short-chain type dehydrogenase/reductase (At3g04000) mRNA, complete cds Length = 850 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 317 tagccatccaccttgccgagctt 339 ||||||||||||||||||||||| Sbjct: 95 tagccatccaccttgccgagctt 117
>ref|NM_124453.2| Arabidopsis thaliana RGP4 (reversibly glycosylated polypeptide 4); alpha-1,4-glucan-protein synthase (UDP-forming) AT5G50750 (RGP4) mRNA, complete cds Length = 1359 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || ||||| || |||||||||||||| | || |||||||||||||| Sbjct: 908 gttcacgaatgggttactggctttgctgtgccacagatacggcagaccagtctt 855
>gb|AF329280.1|AF329280 Arabidopsis thaliana reversibly glycosylated polypeptide RGP-4 (RGP4) mRNA, complete cds Length = 1251 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || ||||| || |||||||||||||| | || |||||||||||||| Sbjct: 846 gttcacgaatgggttactggctttgctgtgccacagatacggcagaccagtctt 793
>gb|BT005194.1| Arabidopsis thaliana clone U20586 putative UDP-glucose (At5g50750) mRNA, complete cds Length = 1126 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || ||||| || |||||||||||||| | || |||||||||||||| Sbjct: 834 gttcacgaatgggttactggctttgctgtgccacagatacggcagaccagtctt 781
>gb|BT004025.1| Arabidopsis thaliana clone RAFL15-21-J03 (R20586) putative UDP-glucose:protein transglucosylase (At5g50750) mRNA, complete cds Length = 1317 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || ||||| || |||||||||||||| | || |||||||||||||| Sbjct: 872 gttcacgaatgggttactggctttgctgtgccacagatacggcagaccagtctt 819
>gb|AY183095.1| Trifolium repens clone ca876 microsatellite sequence Length = 533 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 551 accttggtgcaccatccagcccacatatcatcgtagcg 588 |||||| | ||||| ||||||||||| ||||||||||| Sbjct: 284 accttgatacaccagccagcccacatgtcatcgtagcg 247
>dbj|AB023037.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB16 Length = 66087 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Minus Query: 469 gttcacaaacgggttgcttgctttgctgtgccagatgtagggcagaccagtctt 522 |||||| || ||||| || |||||||||||||| | || |||||||||||||| Sbjct: 46356 gttcacgaatgggttactggctttgctgtgccacagatacggcagaccagtctt 46303
>ref|NM_204435.1| Gallus gallus asparagine-linked glycosylation 6 homolog (S. cerevisiae, alpha-1,3-glucosyltransferase) (ALG6), mRNA Length = 1813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ggacagtggtggcctcctttg 398 ||||||||||||||||||||| Sbjct: 792 ggacagtggtggcctcctttg 812
>gb|AC162035.5| Mus musculus chromosome 18, clone RP23-434N7, complete sequence Length = 200472 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 tggcatcagcaagcttgttga 314 ||||||||||||||||||||| Sbjct: 124913 tggcatcagcaagcttgttga 124933
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 aagaaggtaaattttaagtta 99 ||||||||||||||||||||| Sbjct: 129219 aagaaggtaaattttaagtta 129239
>emb|AL731818.6| Mouse DNA sequence from clone RP23-401L13 on chromosome 11 Contains two novel genes, the AI503894 gene for expressed sequence AI503894, a laminin receptor 1 (ribosomal protein SA)(Lamr1) pseudogene and a CpG island, complete sequence Length = 201664 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 caacacaagcaaaaatgtaaa 46 ||||||||||||||||||||| Sbjct: 102548 caacacaagcaaaaatgtaaa 102568
>emb|AJ719772.1| Gallus gallus mRNA for hypothetical protein, clone 6f21 Length = 1873 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ggacagtggtggcctcctttg 398 ||||||||||||||||||||| Sbjct: 774 ggacagtggtggcctcctttg 794
>gb|AF308281.1| Zonotrichia atricapilla isolate 11 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308280.1| Zonotrichia atricapilla isolate 10 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308279.1| Zonotrichia atricapilla isolate 9 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308278.1| Zonotrichia atricapilla isolate 8 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308277.1| Zonotrichia atricapilla isolate 7 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308276.1| Zonotrichia atricapilla isolate 6AK mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308275.1| Zonotrichia atricapilla isolate 5AK mitochondrial control region, partial sequence Length = 344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 57 cctctcacttgctcttcacag 77
>gb|AF308274.1| Zonotrichia atricapilla isolate 6CA mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308273.1| Zonotrichia atricapilla isolate 5CA mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308272.1| Zonotrichia atricapilla isolate 4 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308271.1| Zonotrichia atricapilla isolate 3 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308270.1| Zonotrichia atricapilla isolate 2 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308269.1| Zonotrichia atricapilla isolate 1 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308268.1| Zonotrichia leucophrys isolate 47 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308267.1| Zonotrichia leucophrys isolate 46 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308266.1| Zonotrichia leucophrys isolate 45 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308265.1| Zonotrichia leucophrys isolate 44 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308264.1| Zonotrichia leucophrys isolate 43 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308263.1| Zonotrichia leucophrys isolate 42 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308262.1| Zonotrichia leucophrys isolate 41 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308261.1| Zonotrichia leucophrys isolate 40 mitochondrial control region, partial sequence Length = 344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 57 cctctcacttgctcttcacag 77
>gb|AF308260.1| Zonotrichia leucophrys isolate 39 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308259.1| Zonotrichia leucophrys isolate 38 mitochondrial control region, partial sequence Length = 343 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 56 cctctcacttgctcttcacag 76
>gb|AF308258.1| Zonotrichia leucophrys isolate 36 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308257.1| Zonotrichia leucophrys isolate 29 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308256.1| Zonotrichia leucophrys isolate 25 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308255.1| Zonotrichia leucophrys isolate 24 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308254.1| Zonotrichia leucophrys isolate 23 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308253.1| Zonotrichia leucophrys isolate 22 mitochondrial control region, partial sequence Length = 344 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 57 cctctcacttgctcttcacag 77
>gb|AF308252.1| Zonotrichia leucophrys isolate 6 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308251.1| Zonotrichia leucophrys isolate 5 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308250.1| Zonotrichia leucophrys isolate 4 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308249.1| Zonotrichia leucophrys isolate 3 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308248.1| Zonotrichia leucophrys isolate 2 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308247.1| Zonotrichia leucophrys isolate 1 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308246.1| Zonotrichia albicollis isolate 1 mitochondrial control region, partial sequence Length = 345 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AF308245.1| Zonotrichia querula isolate 2 mitochondrial control region, partial sequence Length = 327 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 cctctcacttgctcttcacag 221 ||||||||||||||||||||| Sbjct: 58 cctctcacttgctcttcacag 78
>gb|AC010150.3| Homo sapiens BAC clone RP11-404P12 from 2, complete sequence Length = 173893 Score = 42.1 bits (21), Expect = 2.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 395 tttgagagggtcacagactggaagaaggg 423 ||||||||||||| ||||||||||||||| Sbjct: 143450 tttgagagggtca-agactggaagaaggg 143423
>emb|AJ535824.1|GGA535824 Gallus gallus mRNA for alpha 3 glucosyltransferase (ALG6 gene) Length = 1813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 378 ggacagtggtggcctcctttg 398 ||||||||||||||||||||| Sbjct: 792 ggacagtggtggcctcctttg 812
>ref|NM_191645.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2058 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctcctgccagaagatgccgt 452 |||||||||||||||||||| Sbjct: 195 ctcctgccagaagatgccgt 176
>ref|NM_130988.1| Danio rerio patched1 (ptc1), mRNA Length = 3672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ggatcagctcctcctgccag 442 |||||||||||||||||||| Sbjct: 976 ggatcagctcctcctgccag 957
>gb|AY657863.1| Synthetic construct Peudomonas aeruginosa clone FLH045578.01F PA3756 gene, partial cds Length = 501 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggttgcttgctttgctgtgc 499 |||||||||||||||||||| Sbjct: 8 ggttgcttgctttgctgtgc 27
>ref|XM_957559.1| Neurospora crassa OR74A hypothetical protein ( (AF013601) acetolactate synthase [Magnaporthe grisea] ) (NCU07982.1) partial mRNA Length = 1833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ccatggcatcagcaagcttg 310 |||||||||||||||||||| Sbjct: 1600 ccatggcatcagcaagcttg 1581
>ref|XM_328687.1| Neurospora crassa OR74A hypothetical protein ( (AF013601) acetolactate synthase [Magnaporthe grisea] ) (NCU07982.1) partial mRNA Length = 1833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ccatggcatcagcaagcttg 310 |||||||||||||||||||| Sbjct: 1600 ccatggcatcagcaagcttg 1581
>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence Length = 162440 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcagtatgggtagctcacat 170 |||||||||||||||||||| Sbjct: 154109 tcagtatgggtagctcacat 154128
>ref|XM_537838.2| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP domain-like 3, transcript variant 1 (LOC480718), mRNA Length = 3344 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 agggtcacagactggaagaagggg 424 |||||||||||| ||||||||||| Sbjct: 385 agggtcacagacaggaagaagggg 362
>ref|XM_857841.1| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP domain-like 3, transcript variant 3 (LOC480718), mRNA Length = 3544 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 agggtcacagactggaagaagggg 424 |||||||||||| ||||||||||| Sbjct: 640 agggtcacagacaggaagaagggg 617
>ref|XM_857820.1| PREDICTED: Canis familiaris similar to GTPase activating Rap/RanGAP domain-like 3, transcript variant 2 (LOC480718), mRNA Length = 3177 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 401 agggtcacagactggaagaagggg 424 |||||||||||| ||||||||||| Sbjct: 367 agggtcacagacaggaagaagggg 344
>gb|AC123823.3| Mus musculus BAC clone RP24-63C11 from chromosome 7, complete sequence Length = 185494 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 111126 aaaaatgtaaattccctaaa 111145
>gb|AC158512.2| Mus musculus BAC clone RP24-319O6 from chromosome 9, complete sequence Length = 171723 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 agctcaaggtaacacttctg 378 |||||||||||||||||||| Sbjct: 9964 agctcaaggtaacacttctg 9983
>emb|AL590453.10| Human DNA sequence from clone RP11-294K17 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 187461 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 aactgtatatgtatgctact 199 |||||||||||||||||||| Sbjct: 147090 aactgtatatgtatgctact 147071
>emb|AL139322.13| Human DNA sequence from clone RP11-196P14 on chromosome 13 Contains the ITM2B gene for integral membrane protein 2B (BRI FBD E25B E3-16) and a CpG island, complete sequence Length = 120773 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aaaatgtaaattccctaaaa 56 |||||||||||||||||||| Sbjct: 102568 aaaatgtaaattccctaaaa 102587
>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 3/4 Length = 349402 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 tacaactgttccaacacaagcaaa 38 ||||||||||||||||| |||||| Sbjct: 180850 tacaactgttccaacaccagcaaa 180873
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 77184 aaaaatgtaaattccctaaa 77203
>gb|AC161890.4| Mus musculus 6 BAC RP23-356P12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 243990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcagtatgggtagctcacat 170 |||||||||||||||||||| Sbjct: 132941 tcagtatgggtagctcacat 132960
>emb|BX649493.8| Zebrafish DNA sequence from clone CH211-226H23 in linkage group 2, complete sequence Length = 175551 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ggatcagctcctcctgccag 442 |||||||||||||||||||| Sbjct: 152066 ggatcagctcctcctgccag 152047
>gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, complete sequence Length = 180504 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aacacgagtatttcagtatg 158 |||||||||||||||||||| Sbjct: 148109 aacacgagtatttcagtatg 148090
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 99878 aaaaatgtaaattccctaaa 99897
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 85459 aaaaatgtaaattccctaaa 85478
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 51527 aaaaatgtaaattccctaaa 51546
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 106265 aaaaatgtaaattccctaaa 106284
>gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome 13, complete sequence Length = 204778 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ctctcacttgctcttcacag 221 |||||||||||||||||||| Sbjct: 105670 ctctcacttgctcttcacag 105651
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctcctgccagaagatgccgt 452 |||||||||||||||||||| Sbjct: 29264908 ctcctgccagaagatgccgt 29264889
>gb|AC112140.4| Homo sapiens BAC clone RP11-131H21 from 4, complete sequence Length = 99369 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 aaaaatgtaaattccctaaaacca 59 |||||| ||||||||||||||||| Sbjct: 19160 aaaaatttaaattccctaaaacca 19137
>gb|AC025949.4| Staphylococcus aureus clone sabac-114, complete sequence Length = 28142 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 27518 aaaaatgtaaattccctaaa 27499
>gb|AE004794.1| Pseudomonas aeruginosa PAO1, section 355 of 529 of the complete genome Length = 13621 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 ggttgcttgctttgctgtgc 499 |||||||||||||||||||| Sbjct: 5603 ggttgcttgctttgctgtgc 5622
>gb|AC084724.6| Homo sapiens BAC clone RP11-613O14 from 4, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 acacaagcaaaaatgtaaat 47 |||||||||||||||||||| Sbjct: 148485 acacaagcaaaaatgtaaat 148504
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctcctgccagaagatgccgt 452 |||||||||||||||||||| Sbjct: 43771 ctcctgccagaagatgccgt 43752
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctcctgccagaagatgccgt 452 |||||||||||||||||||| Sbjct: 110695 ctcctgccagaagatgccgt 110676
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 78477 aaaaatgtaaattccctaaa 78496
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 99917 aaaaatgtaaattccctaaa 99936
>emb|X98883.1|DRPATCH D.rerio mRNA for patched protein Length = 3672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 ggatcagctcctcctgccag 442 |||||||||||||||||||| Sbjct: 976 ggatcagctcctcctgccag 957
>dbj|AK064946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P16, full insert sequence Length = 1980 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 ctcctgccagaagatgccgt 452 |||||||||||||||||||| Sbjct: 495 ctcctgccagaagatgccgt 476
>gb|AC108805.15| Mus musculus chromosome 9, clone RP23-226G13, complete sequence Length = 242531 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 agctcaaggtaacacttctg 378 |||||||||||||||||||| Sbjct: 119125 agctcaaggtaacacttctg 119106
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaaaatgtaaattccctaaa 55 |||||||||||||||||||| Sbjct: 106793 aaaaatgtaaattccctaaa 106812
>dbj|AP003036.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-600E1, complete sequence Length = 55000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aacacgagtatttcagtatg 158 |||||||||||||||||||| Sbjct: 22771 aacacgagtatttcagtatg 22790
>gb|AC127698.5| Mus musculus BAC clone RP24-113N24 from 3, complete sequence Length = 174669 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agctcgtcccaggcctcgat 282 |||||||||||||||||||| Sbjct: 399 agctcgtcccaggcctcgat 380
>gb|AC134571.4| Mus musculus BAC clone RP23-435E17 from 3, complete sequence Length = 198578 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agctcgtcccaggcctcgat 282 |||||||||||||||||||| Sbjct: 136278 agctcgtcccaggcctcgat 136297
>emb|AL772406.4| Mouse DNA sequence from clone RP23-321K16 on chromosome 4, complete sequence Length = 151744 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 cagctcctcctgccagaaga 446 |||||||||||||||||||| Sbjct: 94624 cagctcctcctgccagaaga 94643 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,745,570 Number of Sequences: 3902068 Number of extensions: 5745570 Number of successful extensions: 118527 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 118033 Number of HSP's gapped (non-prelim): 473 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)