Clone Name | rbasd13h20 |
---|---|
Clone Library Name | barley_pub |
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 38.9 bits (89), Expect = 0.013 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +1 Query: 178 TTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303 +T+S PP +P P AP PP P P GTV+ P + PA+ Sbjct: 245 STSSGPPTAPTPTSPFGTAPMPPGPPPPGTVSPPLPPSAPAV 286
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 35.4 bits (80), Expect = 0.14 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Frame = +1 Query: 178 TTTSFPPISPAAP-------LPHLQAPSPPSPRPLGTVTISCPSTYP 297 T+TS PPI P+ P +P L AP+PP P T+S P P Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
>GPNMB_MOUSE (Q99P91) Transmembrane glycoprotein NMB precursor (Dendritic| cell-associated transmembrane protein) (DC-HIL) Length = 574 Score = 33.9 bits (76), Expect = 0.40 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 PP SP+ P P PSPP P PL T++ PS P Sbjct: 324 PPPSPSTPPPPSTPPSPP-PSPLPTLSTPSPSLMP 357
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 33.5 bits (75), Expect = 0.53 Identities = 16/35 (45%), Positives = 16/35 (45%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 PP P P P P PP P PL T P TYP Sbjct: 2305 PPPPPPPPPPPPPPPPPPPPPPLPPATSPKPPTYP 2339
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)| (Protein kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 33.1 bits (74), Expect = 0.69 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPS---PRPLGTVTISCPSTYPAIA 306 PP SPA PL ++ P PP P T+ + P+T P +A Sbjct: 848 PPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLA 888
>ATF5_MOUSE (O70191) Cyclic AMP-dependent transcription factor ATF-5| (Activating transcription factor 5-alpha/beta) (Transcription factor ATFx) (Transcription factor-like protein ODA-10) (BZIP protein ATF7) (NRIF3-associated protein) (NAP1) Length = 283 Score = 33.1 bits (74), Expect = 0.69 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = +1 Query: 169 FYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291 F+ PP SP P P APS P P PL T + P T Sbjct: 115 FFLDAPLLPPPSPPPPPPPAAAPSLPLPLPLPTFDLPQPPT 155
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 33.1 bits (74), Expect = 0.69 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 190 FPPISPAAPLPHLQ-APSPPSPRPLGTVTISCPSTYPAI 303 +PPI+P P+ H P PPSP P +S P YP I Sbjct: 154 YPPITPTPPIVHPPVTPKPPSPTP---PIVSPPIVYPPI 189
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 33.1 bits (74), Expect = 0.69 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%) Frame = +1 Query: 139 AHARSLVPHRFYCTTTSFPPI----SPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 A+A+ + F C + PP SPA P P +P+PPSP P S PS P Sbjct: 27 ANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAP 83 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 P SPA P P +P+PPSP P S PS P Sbjct: 93 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAP 126 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 P SPA P P +P+PPSP P + + PS P Sbjct: 98 PPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSP 131 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 P SP +P+P AP PPSP P PS P Sbjct: 306 PSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAP 340 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 P SPA P P +P PPSP P + + PS P Sbjct: 55 PPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAP 88 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 196 PISPAAPLPHLQAP-SPPSPRPLGTVTISCPSTYP 297 P SPA P+P AP SPPSP P + + PS P Sbjct: 204 PPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSP 238 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303 P SPA P P +P+PPSP P + S PS P + Sbjct: 113 PPSPAPPSP--PSPAPPSPSPPAPPSPSPPSPAPPL 146 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRP 258 P SPA P P +P+PPSP P Sbjct: 88 PPSPAPPSPAPPSPAPPSPAP 108 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRP 258 P SPA P P +P+PPSP P Sbjct: 83 PPSPAPPSPAPPSPAPPSPAP 103 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRP 258 P SPA P P +P+PPSP P Sbjct: 78 PPSPAPPSPAPPSPAPPSPAP 98
>DDEF1_MOUSE (Q9QWY8) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent| ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1147 Score = 32.7 bits (73), Expect = 0.90 Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 6/60 (10%) Frame = +1 Query: 130 NYGAHARSLVPHRFYCTTTSFP--PISPAAPLPHLQA----PSPPSPRPLGTVTISCPST 291 +YGA + F T+T P P S A PLP A PPS PLGT T S ST Sbjct: 781 SYGAFTNQI----FASTSTDLPTSPTSEAPPLPPRNAGKGPTGPPSTLPLGTQTSSGSST 836
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = +1 Query: 178 TTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291 TTT PPIS P PSPP+ P T P T Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPT 1488 Score = 29.3 bits (64), Expect = 10.0 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = +1 Query: 178 TTTSFPP-ISPAAPLPHLQAPSP---PSPRPLGTVTISCPSTYPA 300 TTT+ PP +P+ P P P PSP P+ T T P+T P+ Sbjct: 1412 TTTTLPPTTTPSPPTTTTTTPPPTTTPSP-PITTTTTPLPTTTPS 1455
>HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low molecular weight| heat shock protein) (Heat shock protein 17) (HSP 16.9) Length = 151 Score = 32.0 bits (71), Expect = 1.5 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPED E AG +G L VTVPK Sbjct: 109 RFRLPEDAKVEEVKAGLENGVLTVTVPK 136
>KPTA_AGRT5 (Q8U9Z2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)| Length = 186 Score = 32.0 bits (71), Expect = 1.5 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +3 Query: 417 DPGVNPHEPRPHLAHGAAGR--EEVERSGALERPDVGVRGERQLEHLAVHVRQPAEDLLG 590 D G P EP P L HG A R E + R G RP GERQ HL+ D Sbjct: 83 DLGQPPVEPPPQLFHGTATRFLEPILREGL--RP-----GERQQVHLSA-------DRTT 128 Query: 591 AVAVGRR 611 A+AVG+R Sbjct: 129 ALAVGQR 135
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +1 Query: 148 RSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPA 300 R+ VP + PP P P+PH P+ P+P P TI+ PS P+ Sbjct: 448 RTHVPPHRPPSAARLPP--PVIPIPHQSPPASPTPHPAPVSTIA-PSVTPS 495
>BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance protein 1| (CRK-associated substrate) (p130cas) Length = 870 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +1 Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTY 294 S PP +PA P P L AP+PP+ + T P+TY Sbjct: 76 SGPPATPAQPQPGLHAPAPPASQ----YTPMLPNTY 107
>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located| protein 2) (Elastin microfibril interfacer 2) (Protein FOAP-10) Length = 1053 Score = 31.6 bits (70), Expect = 2.0 Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 13/109 (11%) Frame = +1 Query: 16 LNSSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTT---- 183 ++ +L +I++ N SLW +QM + ++ +S + H F +T Sbjct: 719 ISGNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQD 778 Query: 184 ---------TSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303 PP AP LQ P P PRP G T P P + Sbjct: 779 LVKFQPSAKAPSPPPPAEAPKEPLQ-PEPAPPRPSGPATAEDPGRRPVL 826
>YBV8_YEAST (P38266) Protein YBR108W| Length = 947 Score = 31.2 bits (69), Expect = 2.6 Identities = 22/84 (26%), Positives = 31/84 (36%) Frame = +1 Query: 19 NSSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTSFPP 198 N+ LPQ+ E + ++ Q S N QD +YGA PP Sbjct: 329 NALLPQMNVEGVSGMAAVQPVYGQAMSSTTNMQDSNPSYGASPMQ-----------GQPP 377 Query: 199 ISPAAPLPHLQAPSPPSPRPLGTV 270 + P+P P PP P G + Sbjct: 378 VGGQPPVPVRMQPQPPQPMQQGNI 401
>S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute carrier family| 39 member 6) (Endoplamic reticulum membrane-linked protein) (Ermelin) Length = 765 Score = 31.2 bits (69), Expect = 2.6 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 9/62 (14%) Frame = +3 Query: 393 SVHHHHLDDPGVNPHEPRPHLAHGAAGRE---------EVERSGALERPDVGVRGERQLE 545 S H HH D + HE H +H AG+ + + SG R +G +G R E Sbjct: 119 SDHEHHSDHEHHSDHEHHSHRSHTVAGKNNRKAFCPDLDSDNSGKNPRTSLG-KGSRPAE 177 Query: 546 HL 551 H+ Sbjct: 178 HM 179
>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5| Length = 780 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +1 Query: 154 LVPHRFY---CTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291 L P +F+ CTT + +PA P +AP PP P+P + P T Sbjct: 80 LQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVPPDPQPTSAQARNPPVT 128
>POLG_HCVBK (P26663) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 PP+ PLP ++AP P PR TV ++ S A+A Sbjct: 2307 PPVVHGCPLPPIKAPPIPPPRRKRTVVLTESSVSSALA 2344
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 5/33 (15%) Frame = +1 Query: 175 CTTTS-----FPPISPAAPLPHLQAPSPPSPRP 258 CT T+ P PAAP+P AP PP P P Sbjct: 1414 CTKTARIQSAMPAAKPAAPVPAAPAPPPPPPPP 1446
>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 393 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/41 (36%), Positives = 16/41 (39%) Frame = +1 Query: 142 HARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264 H S F C+ PP P P P P PP P P G Sbjct: 166 HPSSAASATFSCSGPPPPPPPPVPPPPTGSTPPPPPPLPAG 206
>HSP24_ORYSA (Q84Q72) 17.4 kDa class I heat shock protein 4| Length = 161 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPE+ PE A +G L VTVPK Sbjct: 119 RFRLPENTKPEQIKASMENGVLTVTVPK 146
>HSP21_ORYSA (P31673) 17.4 kDa class I heat shock protein 1| Length = 154 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPE+ PE A +G L VTVPK Sbjct: 112 RFRLPENTKPEQIKASMENGVLTVTVPK 139
>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (hPER) Length = 1290 Score = 30.8 bits (68), Expect = 3.4 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +1 Query: 76 KKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCT---TTSFPPISPAAPLPHLQAPSPP 246 + K + +R +QN + Y +H + P + T TT FP + PLP P Sbjct: 836 RSKAKRSRHHQNPRAEAPCYVSHPSPVPPSTPWPTPPATTPFPAVVQPYPLPVFSPRGGP 895 Query: 247 SPRPLGTVTISCPSTYPA 300 P P ++ P+ +PA Sbjct: 896 QPLPPAPTSVP-PAAFPA 912
>HSP22_ORYSA (Q84J50) 17.4 kDa class I heat shock protein 2| Length = 159 Score = 30.8 bits (68), Expect = 3.4 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPE+ PE A +G L VTVPK Sbjct: 117 RFRLPENTKPEQIKASMENGVLTVTVPK 144
>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic| region Length = 224 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +1 Query: 178 TTTSFPPISPAAPLPHLQAPS-PPSPRPLGTVTISCPSTYPA 300 T T PP SP P P PS PPSP PLG P YP+ Sbjct: 114 TPTPSPPPSPIPPTP---TPSPPPSPSPLGE-----PMYYPS 147 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 PPI P P PSPPSP P T P+ P Sbjct: 46 PPIVPLPTPPPTPTPSPPSPTPPPTPIPPTPTPTP 80
>HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3| Length = 161 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPKGRGEGGD 237 R+RLP++ PE A +G L VTVPK + D Sbjct: 119 RFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPD 153
>RGS9_RAT (P49805) Regulator of G-protein signaling 9 (RGS9)| Length = 677 Score = 30.4 bits (67), Expect = 4.5 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Frame = +1 Query: 19 NSSLPQIRKE-QNTKRPSLWKK--KKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTS 189 +S+LP +R+ +++ P + ++ +++ AR NT D ++ G H PH T T Sbjct: 427 SSTLPFMRRHLRSSPSPVILRQLEEEERAREAANTVD-ITQPGQHLAPS-PHLAVYTGTC 484 Query: 190 FPPISPAAPL-PHLQAPSPPSPRP 258 PP SP++P P ++P P P P Sbjct: 485 VPP-SPSSPFSPSCRSPRKPFPSP 507
>FBRL_DROME (Q9W1V3) Fibrillarin| Length = 344 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 257 GRGEGGDGAWRCGNGAAGEIGGKLVVVQ*NR 165 GRG GG G G GA G GGK V ++ +R Sbjct: 87 GRGGGGRGGGGRGGGAGGFKGGKTVTIEPHR 117
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel [Contains:| Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Frame = +1 Query: 184 TSFPPISPAAPLPHLQAPSPPSP----RPLGTVTISCPSTYP 297 T+ P++P AP P APS P P RP G + P +P Sbjct: 1303 TAPEPLAPEAPAPEAPAPSSPPPASQERPEGDKDAARPEEHP 1344
>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30| Length = 782 Score = 30.4 bits (67), Expect = 4.5 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Frame = +1 Query: 139 AHAR----SLVPHRFYCTTTSFP---PISPAAPLPHLQAPSPPSPRPLG 264 AHAR + P + Y + ++ P PI PA P+PH PP PLG Sbjct: 582 AHARFATSPIQPPKEYASVSTCPRSTPIPPATPIPHSHVYQPP---PLG 627
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)| (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 30.4 bits (67), Expect = 4.5 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%) Frame = +1 Query: 22 SSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTSFPPI 201 +SLP + KE + S ++KK ++ Q ++ ++ + PH + TTS P I Sbjct: 2114 TSLPNLAKEAKDAKGS--RRKKSLSEKVQLSESSVTLSPVDSLES-PHTYVSDTTSSPMI 2170 Query: 202 SP-----AAPLPHLQAPSPPSP 252 + A+P P L +PP+P Sbjct: 2171 TSPGILQASPNPMLATAAPPAP 2192
>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion| 2 protein) Length = 314 Score = 30.4 bits (67), Expect = 4.5 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = +1 Query: 193 PPISPAAPLPH-LQAPSPPSPRPL 261 PP+ P PLP L A PPSP PL Sbjct: 267 PPLPPPPPLPQSLTASPPPSPEPL 290
>STRC_MOUSE (Q8VIM6) Stereocilin precursor| Length = 1809 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291 TT PP + P+P P P +PRP T PST Sbjct: 391 TTPQPPPTTTQPIPDTTQPPPVTPRPPPTTPQPPPST 427
>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing| protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1 ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral sclerosis 2 chromosomal region candidate 9 gene protein) Length = 1302 Score = 30.4 bits (67), Expect = 4.5 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = +1 Query: 124 MSNYGAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303 + + A L H+ T PP P P P + AP PP P VTI P++ + Sbjct: 789 LPQFSAPPPPLKIHQVQHITQVAPPTPP--PPPPIPAPLPPQAPPKPLVTIPAPTSTKTV 846 Query: 304 A 306 A Sbjct: 847 A 847
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/35 (42%), Positives = 15/35 (42%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 PP P P P SPP PL T P TYP Sbjct: 2351 PPPPPPPPPPSPSTSSPPPTPPLPPATSPKPPTYP 2385
>HES1_HUMAN (Q14469) Transcription factor HES-1 (Hairy and enhancer of split 1)| (Hairy-like) (HHL) (Hairy homolog) Length = 280 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = +1 Query: 154 LVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264 L+ H C T P P P LQAP PP P P G Sbjct: 139 LLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGG 175
>HES1_BOVIN (Q3ZBG4) Transcription factor HES-1 (Hairy and enhancer of split 1)| Length = 280 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = +1 Query: 154 LVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264 L+ H C T P P P LQAP PP P P G Sbjct: 139 LLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGG 175
>FBRL_DROER (Q8I1F4) Fibrillarin| Length = 345 Score = 30.4 bits (67), Expect = 4.5 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -2 Query: 257 GRGEGGDGAWRCGNGAAGEIGGKLVVVQ*NR 165 GRG GG G G GA G GGK V ++ +R Sbjct: 88 GRGGGGRGGGGRGGGAGGFKGGKTVTIEPHR 118
>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive| alpha-factor receptor and arginine permease (Vacuolar protein sorting-associated protein VPS23) Length = 385 Score = 30.0 bits (66), Expect = 5.8 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRP 258 PP+ P PHL+ P PP P P Sbjct: 178 PPLPPKPKSPHLKPPLPPPPPP 199
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +1 Query: 139 AHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRP-LGTVTISCPSTYP 297 AH ++ P C PPISP +P P AP+P +P P + ++ CP P Sbjct: 1735 AHPPNISPSA--CPLPPPPPISPPSPPP---APAPLAPPPDISPFSLFCPPPSP 1783
>ECR_LUCCU (O18531) Ecdysone receptor (Ecdysteroid receptor)| (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH) Length = 757 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 399 HHHHLDDPGVNPHEPRPHLAHG-AAGREEVERSGAL 503 HHHH+++ + H PR A+ ++GR+++ S +L Sbjct: 239 HHHHMNNSSMMHHTPRSESANSISSGRDDLSPSSSL 274
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPA 300 P PAAP P A +PP P P T++ P +PA Sbjct: 255 PSPPAAPAPAAPAAAPPPPPP-APATLARPPGHPA 288
>UL14_HHV11 (P04291) Hypothetical UL14 protein| Length = 219 Score = 30.0 bits (66), Expect = 5.8 Identities = 20/48 (41%), Positives = 26/48 (54%) Frame = +1 Query: 163 HRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 H Y T + PP +PAAPL + +PPSP P + P+T PA A Sbjct: 170 HPTYTPTPTGPPGAPAAPL----SRTPPSPAP-----PTGPATDPASA 208
>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog| Length = 319 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPS 249 PP SPAAP P PSPP+ Sbjct: 84 PPTSPAAPQPRENPPSPPT 102 Score = 30.0 bits (66), Expect = 5.8 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPS 249 PP SPAAP P PSPP+ Sbjct: 68 PPTSPAAPQPRENPPSPPT 86
>V022_FOWPV (Q9J5H9) Putative ankyrin repeat protein FPV022| Length = 578 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -2 Query: 584 KVLRR--LPHVYSKVLELPLPADADVRAFEGTTALHFFAACGAMGEVR 447 K+LRR + H +VL++ L D D+ EGTTALH+ + VR Sbjct: 194 KILRRCIVTHYNIEVLKI-LSLDRDILGTEGTTALHYAVEAERLEAVR 240
>POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 30.0 bits (66), Expect = 5.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 PP+ PLP +AP P PR TV +S + A+A Sbjct: 2307 PPVVHGCPLPPAKAPPIPPPRRKRTVVLSESTVSSALA 2344
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 30.0 bits (66), Expect = 5.8 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 187 SFPPISPAAPLPHLQAPSPPSPRP 258 S PP PA P P P PP+PRP Sbjct: 121 SAPPPPPARPPPPPPPPPPPAPRP 144
>KIF17_HUMAN (Q9P2E2) Kinesin-like protein KIF17 (KIF3-related motor protein)| Length = 1029 Score = 30.0 bits (66), Expect = 5.8 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Frame = +1 Query: 64 PSLWKKKKQMARSNQNTQD*MSNY----------GAHARSLVPHRFYCTTTSFPPISPAA 213 P++ + + ++ S N+++ SNY AR + H S P +S + Sbjct: 929 PNMEEDRYRLMLSRSNSENIASNYFRSKRASQILSTDARKSLTHHNSPPGLSCP-LSNNS 987 Query: 214 PLPHLQAPSPPSPRPLGTVTISCPST 291 +P QAP P PRP ++ P T Sbjct: 988 AIPPTQAPEMPQPRPFRLESLDIPFT 1013
>VP61_NPVOP (O10270) 61 kDa protein homolog| Length = 474 Score = 30.0 bits (66), Expect = 5.8 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +1 Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCP 285 TTS PP P L P PP P P+ + S P Sbjct: 294 TTSMPPPPPMVDLATSMPPPPPPPPPMVDLATSMP 328
>Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c| Length = 992 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = +1 Query: 136 GAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPP-----SPRPLGTVTIS 279 GA A + P T + PP A P P P PP P P+G VT+S Sbjct: 898 GATATGIAP-----TEAAVPPSPAANPPPPASGPQPPPVTAAPPVPVGAVTLS 945
>Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285| Length = 992 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Frame = +1 Query: 136 GAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPP-----SPRPLGTVTIS 279 GA A + P T + PP A P P P PP P P+G VT+S Sbjct: 898 GATATGIAP-----TEAAVPPSPAANPPPPASGPQPPPVTAAPPVPVGAVTLS 945
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 S P ++P PL P+PP+P P T+T+ T P Sbjct: 150 SQPRLTPPQPLMMPPRPTPPTPLPPATLTVPPRPTRP 186
>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) Length = 1129 Score = 29.6 bits (65), Expect = 7.6 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +1 Query: 178 TTTSFPPISPAAPLPHLQAPSPPSPRPL 261 T +S P I P A P Q P PP P+ L Sbjct: 535 TASSVPVIPPVAEAPSYQGPPPPYPKHL 562
>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1078 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +1 Query: 160 PHRFYCTTTSFPPISPAAPLPHLQAPSP-PSPRPLGTVTISCPSTY 294 P Y + S+ P +P+ PSP PSP P+G + PSTY Sbjct: 906 PGTLYGSDRSYSPFNPS--------PSPAPSPYPVGYMNTPSPSTY 943
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 157 VPHRFYCTTTSFPPISPA-APLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303 +P F T PP SP +P P +P PPSP P PST P I Sbjct: 50 IPSPFDGPTFVLPPPSPLPSPPPPSPSPPPPSPSP------PPPSTIPLI 93
>POLG_HCVTW (P29846) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 PP+ PLP ++AP P PR TV ++ + A+A Sbjct: 2307 PPVVHGCPLPPVKAPPIPPPRRKRTVVLTESTVSSALA 2344
>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) Length = 487 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 S P ++P PL P+PP+P P T+T+ T P Sbjct: 184 SQPRLTPPQPLMMPPRPTPPTPLPPATLTVPPRPTRP 220
>FBRL_CAEEL (Q22053) Fibrillarin| Length = 352 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -2 Query: 260 KGRGEGGDGAWRCGNGAAGEI-GGKLVVVQ*NRWG 159 +G GG G+ R G G AG + GGK VVV+ +R G Sbjct: 91 RGSPRGGRGSPRGGRGGAGGMRGGKTVVVEPHRLG 125
>MEX67_CANAL (P84149) mRNA export factor MEX67| Length = 617 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 9/51 (17%) Frame = +1 Query: 181 TTSFP------PISPAAPLPHLQAPSPPSPRPLGTVT---ISCPSTYPAIA 306 T+ FP P +P A P + A S PSP P T+T ++ P T P A Sbjct: 503 TSDFPWKVQKLPSNPTAATPGVSATSTPSPLPPTTITTPQLAPPGTGPTTA 553
>PG44_MYCTU (Q50630) Hypothetical PE-PGRS family protein PE_PGRS44| Length = 543 Score = 29.3 bits (64), Expect = 10.0 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -2 Query: 251 GEGGDGAWRCGNGAAGEIGG 192 G GG G W GNG AG GG Sbjct: 182 GAGGAGGWLLGNGGAGGPGG 201
>ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-5| (Activating transcription factor 5) (Transcription factor ATFx) Length = 281 Score = 29.3 bits (64), Expect = 10.0 Identities = 17/41 (41%), Positives = 19/41 (46%) Frame = +1 Query: 169 FYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291 F+ PP SP P P APS P P PL T + P T Sbjct: 115 FFLDAPLLPPPSPPPPPP--PAPSLPLPLPLPTFDLPQPPT 153
>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 591 Score = 29.3 bits (64), Expect = 10.0 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Frame = +1 Query: 43 KEQNTKRPSLWKKKKQMARSNQNTQD*MSNYG--AHARSLVPHRFYCTTTSF-PPISPAA 213 ++Q R + + + R + Q SN AHA + R PP P A Sbjct: 18 QQQQRAREEQERLRLEREREREQEQKRASNLARLAHALPVEEPRIEAPPLPLSPPAPPPA 77 Query: 214 PLPHLQAPSPPSPRPLGTVTISCPSTYP 297 P P L P+P + P+ VT S S P Sbjct: 78 PPPPLATPAPLTVIPIPVVTNSPQSLPP 105
>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial| marker 8) Length = 564 Score = 29.3 bits (64), Expect = 10.0 Identities = 17/47 (36%), Positives = 20/47 (42%) Frame = +1 Query: 130 NYGAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTV 270 N H S P Y PP +P P P AP+PP P P T+ Sbjct: 498 NNAYHTSSPPPAPIYTP----PPPAPHCPPPPPSAPTPPIPSPPSTL 540
>POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3009 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 PP+ PLP +AP P PR TV ++ + A+A Sbjct: 2307 PPVVHGCPLPSTKAPPIPPPRRKRTVVLTESTVSSALA 2344
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 184 TSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297 T P A P+P +P+PP PRP T+ P P Sbjct: 806 TKMSPKPDAKPMPK-GSPTPPGPRPTAGQTVPTPQQSP 842
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 10.0 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = +3 Query: 393 SVHHHHLDDPGVNPHEPRP 449 S HHHH D PG P P P Sbjct: 169 SSHHHHQDPPGGGPPSPPP 187
>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 522 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306 T F P +PAA A P +P P T+T + PS + +IA Sbjct: 187 TLPFTPATPAATTAG--ATQPAAPTPTATITSTGPSLFASIA 226
>HSP12_ORYSA (Q943E6) 16.9 kDa class I heat shock protein 2| Length = 150 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPE+ + AG +G L VTVPK Sbjct: 108 RFRLPENAKVDQVKAGMENGVLTVTVPK 135
>HSP11_ORYSA (P27777) 16.9 kDa class I heat shock protein 1| Length = 150 Score = 29.3 bits (64), Expect = 10.0 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258 R+RLPE+ + AG +G L VTVPK Sbjct: 108 RFRLPENAKVDQVKAGLENGVLTVTVPK 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,569,300 Number of Sequences: 219361 Number of extensions: 1529133 Number of successful extensions: 9963 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 7137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9584 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)