Clone Information

BLAST Search Result

Clone Name	rbasd13h20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y2082_MYCTU (Q10690) Hypothetical protein Rv2082	39	0.013
2	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	35	0.14
3	GPNMB_MOUSE (Q99P91) Transmembrane glycoprotein NMB precursor (D...	34	0.40
4	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	33	0.53
5	WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...	33	0.69
6	ATF5_MOUSE (O70191) Cyclic AMP-dependent transcription factor AT...	33	0.69
7	PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein	33	0.69
8	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	33	0.69
9	DDEF1_MOUSE (Q9QWY8) 130-kDa phosphatidylinositol 4,5-biphosphat...	33	0.90
10	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	32	1.5
11	HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low mo...	32	1.5
12	KPTA_AGRT5 (Q8U9Z2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)	32	1.5
13	TEGU_EBV (P03186) Large tegument protein	32	2.0
14	BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance prot...	32	2.0
15	EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril int...	32	2.0
16	YBV8_YEAST (P38266) Protein YBR108W	31	2.6
17	S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute ...	31	2.6
18	YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5	31	2.6
19	POLG_HCVBK (P26663) Genome polyprotein [Contains: Core protein p...	31	2.6
20	PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor	31	2.6
21	EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulat...	31	3.4
22	HSP24_ORYSA (Q84Q72) 17.4 kDa class I heat shock protein 4	31	3.4
23	HSP21_ORYSA (P31673) 17.4 kDa class I heat shock protein 1	31	3.4
24	PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacema...	31	3.4
25	HSP22_ORYSA (Q84J50) 17.4 kDa class I heat shock protein 2	31	3.4
26	Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 in...	30	4.5
27	HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3	30	4.5
28	RGS9_RAT (P49805) Regulator of G-protein signaling 9 (RGS9)	30	4.5
29	FBRL_DROME (Q9W1V3) Fibrillarin	30	4.5
30	CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-ch...	30	4.5
31	SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30	30	4.5
32	NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr...	30	4.5
33	NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 pr...	30	4.5
34	STRC_MOUSE (Q8VIM6) Stereocilin precursor	30	4.5
35	RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology doma...	30	4.5
36	PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna...	30	4.5
37	HES1_HUMAN (Q14469) Transcription factor HES-1 (Hairy and enhanc...	30	4.5
38	HES1_BOVIN (Q3ZBG4) Transcription factor HES-1 (Hairy and enhanc...	30	4.5
39	FBRL_DROER (Q8I1F4) Fibrillarin	30	4.5
40	STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sen...	30	5.8
41	PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor	30	5.8
42	ECR_LUCCU (O18531) Ecdysone receptor (Ecdysteroid receptor) (20-...	30	5.8
43	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	30	5.8
44	UL14_HHV11 (P04291) Hypothetical UL14 protein	30	5.8
45	CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog	30	5.8
46	V022_FOWPV (Q9J5H9) Putative ankyrin repeat protein FPV022	30	5.8
47	POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p...	30	5.8
48	UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E...	30	5.8
49	KIF17_HUMAN (Q9P2E2) Kinesin-like protein KIF17 (KIF3-related mo...	30	5.8
50	VP61_NPVOP (O10270) 61 kDa protein homolog	30	5.8
51	Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c	30	7.6
52	Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285	30	7.6
53	EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear ...	30	7.6
54	LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2...	30	7.6
55	SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5...	30	7.6
56	PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precu...	30	7.6
57	POLG_HCVTW (P29846) Genome polyprotein [Contains: Core protein p...	30	7.6
58	EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear a...	30	7.6
59	FBRL_CAEEL (Q22053) Fibrillarin	30	7.6
60	MEX67_CANAL (P84149) mRNA export factor MEX67	30	7.6
61	PG44_MYCTU (Q50630) Hypothetical PE-PGRS family protein PE_PGRS44	29	10.0
62	ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-...	29	10.0
63	MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc an...	29	10.0
64	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	29	10.0
65	POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p...	29	10.0
66	PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)	29	10.0
67	VNUA_PRVKA (P33485) Probable nuclear antigen	29	10.0
68	NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucle...	29	10.0
69	HSP12_ORYSA (Q943E6) 16.9 kDa class I heat shock protein 2	29	10.0
70	HSP11_ORYSA (P27777) 16.9 kDa class I heat shock protein 1	29	10.0

>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082|
          Length = 721

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 178 TTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303
           +T+S PP +P    P   AP PP P P GTV+   P + PA+
Sbjct: 245 STSSGPPTAPTPTSPFGTAPMPPGPPPPGTVSPPLPPSAPAV 286

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
 Frame = +1

Query: 178 TTTSFPPISPAAP-------LPHLQAPSPPSPRPLGTVTISCPSTYP 297
           T+TS PPI P+ P       +P L AP+PP   P    T+S P   P
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271

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>GPNMB_MOUSE (Q99P91) Transmembrane glycoprotein NMB precursor (Dendritic|
           cell-associated transmembrane protein) (DC-HIL)
          Length = 574

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           PP SP+ P P    PSPP P PL T++   PS  P
Sbjct: 324 PPPSPSTPPPPSTPPSPP-PSPLPTLSTPSPSLMP 357

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
            PP  P  P P    P PP P PL   T   P TYP
Sbjct: 2305 PPPPPPPPPPPPPPPPPPPPPPLPPATSPKPPTYP 2339

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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPS---PRPLGTVTISCPSTYPAIA 306
           PP SPA PL  ++ P PP      P  T+  + P+T P +A
Sbjct: 848 PPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLA 888

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>ATF5_MOUSE (O70191) Cyclic AMP-dependent transcription factor ATF-5|
           (Activating transcription factor 5-alpha/beta)
           (Transcription factor ATFx) (Transcription factor-like
           protein ODA-10) (BZIP protein ATF7) (NRIF3-associated
           protein) (NAP1)
          Length = 283

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 169 FYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291
           F+      PP SP  P P   APS P P PL T  +  P T
Sbjct: 115 FFLDAPLLPPPSPPPPPPPAAAPSLPLPLPLPTFDLPQPPT 155

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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 190 FPPISPAAPLPHLQ-APSPPSPRPLGTVTISCPSTYPAI 303
           +PPI+P  P+ H    P PPSP P     +S P  YP I
Sbjct: 154 YPPITPTPPIVHPPVTPKPPSPTP---PIVSPPIVYPPI 189

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 139 AHARSLVPHRFYCTTTSFPPI----SPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           A+A+ +    F C  +  PP     SPA P P   +P+PPSP P      S PS  P
Sbjct: 27  ANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAP 83



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           P SPA P P   +P+PPSP P      S PS  P
Sbjct: 93  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAP 126



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           P SPA P P   +P+PPSP P    + + PS  P
Sbjct: 98  PPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSP 131



 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           P  SP +P+P   AP PPSP P        PS  P
Sbjct: 306 PSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAP 340



 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           P SPA P P   +P PPSP P    + + PS  P
Sbjct: 55  PPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAP 88



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 196 PISPAAPLPHLQAP-SPPSPRPLGTVTISCPSTYP 297
           P SPA P+P   AP SPPSP P    + + PS  P
Sbjct: 204 PPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSP 238



 Score = 29.6 bits (65), Expect = 7.6
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303
           P SPA P P   +P+PPSP P    + S PS  P +
Sbjct: 113 PPSPAPPSP--PSPAPPSPSPPAPPSPSPPSPAPPL 146



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRP 258
           P SPA P P   +P+PPSP P
Sbjct: 88  PPSPAPPSPAPPSPAPPSPAP 108



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRP 258
           P SPA P P   +P+PPSP P
Sbjct: 83  PPSPAPPSPAPPSPAPPSPAP 103



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRP 258
           P SPA P P   +P+PPSP P
Sbjct: 78  PPSPAPPSPAPPSPAPPSPAP 98

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>DDEF1_MOUSE (Q9QWY8) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent|
           ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP)
           (ADP-ribosylation factor-directed GTPase-activating
           protein 1) (ARF GTPase-activating protein 1)
           (Development and differe
          Length = 1147

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
 Frame = +1

Query: 130 NYGAHARSLVPHRFYCTTTSFP--PISPAAPLPHLQA----PSPPSPRPLGTVTISCPST 291
           +YGA    +    F  T+T  P  P S A PLP   A      PPS  PLGT T S  ST
Sbjct: 781 SYGAFTNQI----FASTSTDLPTSPTSEAPPLPPRNAGKGPTGPPSTLPLGTQTSSGSST 836

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +1

Query: 178  TTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291
            TTT  PPIS     P    PSPP+  P    T   P T
Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPT 1488



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 178  TTTSFPP-ISPAAPLPHLQAPSP---PSPRPLGTVTISCPSTYPA 300
            TTT+ PP  +P+ P      P P   PSP P+ T T   P+T P+
Sbjct: 1412 TTTTLPPTTTPSPPTTTTTTPPPTTTPSP-PITTTTTPLPTTTPS 1455

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>HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low molecular weight|
           heat shock protein) (Heat shock protein 17) (HSP 16.9)
          Length = 151

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPED   E   AG  +G L VTVPK
Sbjct: 109 RFRLPEDAKVEEVKAGLENGVLTVTVPK 136

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>KPTA_AGRT5 (Q8U9Z2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)|
          Length = 186

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +3

Query: 417 DPGVNPHEPRPHLAHGAAGR--EEVERSGALERPDVGVRGERQLEHLAVHVRQPAEDLLG 590
           D G  P EP P L HG A R  E + R G   RP     GERQ  HL+        D   
Sbjct: 83  DLGQPPVEPPPQLFHGTATRFLEPILREGL--RP-----GERQQVHLSA-------DRTT 128

Query: 591 AVAVGRR 611
           A+AVG+R
Sbjct: 129 ALAVGQR 135

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>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 148 RSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPA 300
           R+ VP     +    PP  P  P+PH   P+ P+P P    TI+ PS  P+
Sbjct: 448 RTHVPPHRPPSAARLPP--PVIPIPHQSPPASPTPHPAPVSTIA-PSVTPS 495

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>BCAR1_HUMAN (P56945) Breast cancer anti-estrogen resistance protein 1|
           (CRK-associated substrate) (p130cas)
          Length = 870

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTY 294
           S PP +PA P P L AP+PP+ +     T   P+TY
Sbjct: 76  SGPPATPAQPQPGLHAPAPPASQ----YTPMLPNTY 107

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>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located|
            protein 2) (Elastin microfibril interfacer 2) (Protein
            FOAP-10)
          Length = 1053

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
 Frame = +1

Query: 16   LNSSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTT---- 183
            ++ +L +I++  N    SLW   +QM  + ++    +S      +    H F  +T    
Sbjct: 719  ISGNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQD 778

Query: 184  ---------TSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303
                        PP    AP   LQ P P  PRP G  T   P   P +
Sbjct: 779  LVKFQPSAKAPSPPPPAEAPKEPLQ-PEPAPPRPSGPATAEDPGRRPVL 826

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>YBV8_YEAST (P38266) Protein YBR108W|
          Length = 947

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 22/84 (26%), Positives = 31/84 (36%)
 Frame = +1

Query: 19  NSSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTSFPP 198
           N+ LPQ+  E  +   ++     Q   S  N QD   +YGA                 PP
Sbjct: 329 NALLPQMNVEGVSGMAAVQPVYGQAMSSTTNMQDSNPSYGASPMQ-----------GQPP 377

Query: 199 ISPAAPLPHLQAPSPPSPRPLGTV 270
           +    P+P    P PP P   G +
Sbjct: 378 VGGQPPVPVRMQPQPPQPMQQGNI 401

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>S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute carrier family|
           39 member 6) (Endoplamic reticulum membrane-linked
           protein) (Ermelin)
          Length = 765

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
 Frame = +3

Query: 393 SVHHHHLDDPGVNPHEPRPHLAHGAAGRE---------EVERSGALERPDVGVRGERQLE 545
           S H HH D    + HE   H +H  AG+          + + SG   R  +G +G R  E
Sbjct: 119 SDHEHHSDHEHHSDHEHHSHRSHTVAGKNNRKAFCPDLDSDNSGKNPRTSLG-KGSRPAE 177

Query: 546 HL 551
           H+
Sbjct: 178 HM 179

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>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +1

Query: 154 LVPHRFY---CTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291
           L P +F+   CTT +    +PA   P  +AP PP P+P      + P T
Sbjct: 80  LQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVPPDPQPTSAQARNPPVT 128

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>POLG_HCVBK (P26663) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3009

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
            PP+    PLP ++AP  P PR   TV ++  S   A+A
Sbjct: 2307 PPVVHGCPLPPIKAPPIPPPRRKRTVVLTESSVSSALA 2344

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>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor|
          Length = 1943

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
 Frame = +1

Query: 175  CTTTS-----FPPISPAAPLPHLQAPSPPSPRP 258
            CT T+      P   PAAP+P   AP PP P P
Sbjct: 1414 CTKTARIQSAMPAAKPAAPVPAAPAPPPPPPPP 1446

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>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 393

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = +1

Query: 142 HARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264
           H  S     F C+    PP  P  P P    P PP P P G
Sbjct: 166 HPSSAASATFSCSGPPPPPPPPVPPPPTGSTPPPPPPLPAG 206

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>HSP24_ORYSA (Q84Q72) 17.4 kDa class I heat shock protein 4|
          Length = 161

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPE+  PE   A   +G L VTVPK
Sbjct: 119 RFRLPENTKPEQIKASMENGVLTVTVPK 146

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>HSP21_ORYSA (P31673) 17.4 kDa class I heat shock protein 1|
          Length = 154

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPE+  PE   A   +G L VTVPK
Sbjct: 112 RFRLPENTKPEQIKASMENGVLTVTVPK 139

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>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (hPER)
          Length = 1290

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +1

Query: 76   KKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCT---TTSFPPISPAAPLPHLQAPSPP 246
            + K + +R +QN +     Y +H   + P   + T   TT FP +    PLP       P
Sbjct: 836  RSKAKRSRHHQNPRAEAPCYVSHPSPVPPSTPWPTPPATTPFPAVVQPYPLPVFSPRGGP 895

Query: 247  SPRPLGTVTISCPSTYPA 300
             P P    ++  P+ +PA
Sbjct: 896  QPLPPAPTSVP-PAAFPA 912

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>HSP22_ORYSA (Q84J50) 17.4 kDa class I heat shock protein 2|
          Length = 159

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPE+  PE   A   +G L VTVPK
Sbjct: 117 RFRLPENTKPEQIKASMENGVLTVTVPK 144

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>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 178 TTTSFPPISPAAPLPHLQAPS-PPSPRPLGTVTISCPSTYPA 300
           T T  PP SP  P P    PS PPSP PLG      P  YP+
Sbjct: 114 TPTPSPPPSPIPPTP---TPSPPPSPSPLGE-----PMYYPS 147



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           PPI P    P    PSPPSP P  T     P+  P
Sbjct: 46  PPIVPLPTPPPTPTPSPPSPTPPPTPIPPTPTPTP 80

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>HSP23_ORYSA (Q84Q77) 17.4 kDa class I heat shock protein 3|
          Length = 161

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPKGRGEGGD 237
           R+RLP++  PE   A   +G L VTVPK   +  D
Sbjct: 119 RFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPD 153

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>RGS9_RAT (P49805) Regulator of G-protein signaling 9 (RGS9)|
          Length = 677

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
 Frame = +1

Query: 19  NSSLPQIRKE-QNTKRPSLWKK--KKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTS 189
           +S+LP +R+  +++  P + ++  +++ AR   NT D ++  G H     PH    T T 
Sbjct: 427 SSTLPFMRRHLRSSPSPVILRQLEEEERAREAANTVD-ITQPGQHLAPS-PHLAVYTGTC 484

Query: 190 FPPISPAAPL-PHLQAPSPPSPRP 258
            PP SP++P  P  ++P  P P P
Sbjct: 485 VPP-SPSSPFSPSCRSPRKPFPSP 507

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>FBRL_DROME (Q9W1V3) Fibrillarin|
          Length = 344

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 257 GRGEGGDGAWRCGNGAAGEIGGKLVVVQ*NR 165
           GRG GG G    G GA G  GGK V ++ +R
Sbjct: 87  GRGGGGRGGGGRGGGAGGFKGGKTVTIEPHR 117

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>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel [Contains:|
            Glutamic acid-rich protein (GARP);
            Cyclic-nucleotide-gated cation channel 4 (CNG channel 4)
            (CNG-4) (Cyclic nucleotide-gated cation channel
            modulatory subunit)]
          Length = 1394

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 184  TSFPPISPAAPLPHLQAPSPPSP----RPLGTVTISCPSTYP 297
            T+  P++P AP P   APS P P    RP G    + P  +P
Sbjct: 1303 TAPEPLAPEAPAPEAPAPSSPPPASQERPEGDKDAARPEEHP 1344

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>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30|
          Length = 782

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +1

Query: 139 AHAR----SLVPHRFYCTTTSFP---PISPAAPLPHLQAPSPPSPRPLG 264
           AHAR     + P + Y + ++ P   PI PA P+PH     PP   PLG
Sbjct: 582 AHARFATSPIQPPKEYASVSTCPRSTPIPPATPIPHSHVYQPP---PLG 627

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>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (hN2) [Contains: Notch 2 extracellular truncation; Notch
            2 intracellular domain]
          Length = 2471

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
 Frame = +1

Query: 22   SSLPQIRKEQNTKRPSLWKKKKQMARSNQNTQD*MSNYGAHARSLVPHRFYCTTTSFPPI 201
            +SLP + KE    + S  ++KK ++   Q ++  ++     +    PH +   TTS P I
Sbjct: 2114 TSLPNLAKEAKDAKGS--RRKKSLSEKVQLSESSVTLSPVDSLES-PHTYVSDTTSSPMI 2170

Query: 202  SP-----AAPLPHLQAPSPPSP 252
            +      A+P P L   +PP+P
Sbjct: 2171 TSPGILQASPNPMLATAAPPAP 2192

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>NAT6_MOUSE (Q9R123) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion|
           2 protein)
          Length = 314

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 193 PPISPAAPLPH-LQAPSPPSPRPL 261
           PP+ P  PLP  L A  PPSP PL
Sbjct: 267 PPLPPPPPLPQSLTASPPPSPEPL 290

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>STRC_MOUSE (Q8VIM6) Stereocilin precursor|
          Length = 1809

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291
           TT  PP +   P+P    P P +PRP  T     PST
Sbjct: 391 TTPQPPPTTTQPIPDTTQPPPVTPRPPPTTPQPPPST 427

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>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing|
           protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1
           ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral
           sclerosis 2 chromosomal region candidate 9 gene protein)
          Length = 1302

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +1

Query: 124 MSNYGAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303
           +  + A    L  H+    T   PP  P  P P + AP PP   P   VTI  P++   +
Sbjct: 789 LPQFSAPPPPLKIHQVQHITQVAPPTPP--PPPPIPAPLPPQAPPKPLVTIPAPTSTKTV 846

Query: 304 A 306
           A
Sbjct: 847 A 847

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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
            PP  P  P P     SPP   PL   T   P TYP
Sbjct: 2351 PPPPPPPPPPSPSTSSPPPTPPLPPATSPKPPTYP 2385

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>HES1_HUMAN (Q14469) Transcription factor HES-1 (Hairy and enhancer of split 1)|
           (Hairy-like) (HHL) (Hairy homolog)
          Length = 280

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +1

Query: 154 LVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264
           L+ H   C T       P  P P LQAP PP P P G
Sbjct: 139 LLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGG 175

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>HES1_BOVIN (Q3ZBG4) Transcription factor HES-1 (Hairy and enhancer of split 1)|
          Length = 280

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = +1

Query: 154 LVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLG 264
           L+ H   C T       P  P P LQAP PP P P G
Sbjct: 139 LLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGG 175

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>FBRL_DROER (Q8I1F4) Fibrillarin|
          Length = 345

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 257 GRGEGGDGAWRCGNGAAGEIGGKLVVVQ*NR 165
           GRG GG G    G GA G  GGK V ++ +R
Sbjct: 88  GRGGGGRGGGGRGGGAGGFKGGKTVTIEPHR 118

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>STP22_YEAST (P25604) Suppressor protein STP22 of temperature-sensitive|
           alpha-factor receptor and arginine permease (Vacuolar
           protein sorting-associated protein VPS23)
          Length = 385

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPSPRP 258
           PP+ P    PHL+ P PP P P
Sbjct: 178 PPLPPKPKSPHLKPPLPPPPPP 199

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>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor|
          Length = 1955

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 139  AHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRP-LGTVTISCPSTYP 297
            AH  ++ P    C     PPISP +P P   AP+P +P P +   ++ CP   P
Sbjct: 1735 AHPPNISPSA--CPLPPPPPISPPSPPP---APAPLAPPPDISPFSLFCPPPSP 1783

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>ECR_LUCCU (O18531) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 757

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 399 HHHHLDDPGVNPHEPRPHLAHG-AAGREEVERSGAL 503
           HHHH+++  +  H PR   A+  ++GR+++  S +L
Sbjct: 239 HHHHMNNSSMMHHTPRSESANSISSGRDDLSPSSSL 274

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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 196 PISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPA 300
           P  PAAP P   A +PP P P    T++ P  +PA
Sbjct: 255 PSPPAAPAPAAPAAAPPPPPP-APATLARPPGHPA 288

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>UL14_HHV11 (P04291) Hypothetical UL14 protein|
          Length = 219

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = +1

Query: 163 HRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
           H  Y  T + PP +PAAPL    + +PPSP P      + P+T PA A
Sbjct: 170 HPTYTPTPTGPPGAPAAPL----SRTPPSPAP-----PTGPATDPASA 208

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>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog|
          Length = 319

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPS 249
           PP SPAAP P    PSPP+
Sbjct: 84  PPTSPAAPQPRENPPSPPT 102



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 193 PPISPAAPLPHLQAPSPPS 249
           PP SPAAP P    PSPP+
Sbjct: 68  PPTSPAAPQPRENPPSPPT 86

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>V022_FOWPV (Q9J5H9) Putative ankyrin repeat protein FPV022|
          Length = 578

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 584 KVLRR--LPHVYSKVLELPLPADADVRAFEGTTALHFFAACGAMGEVR 447
           K+LRR  + H   +VL++ L  D D+   EGTTALH+      +  VR
Sbjct: 194 KILRRCIVTHYNIEVLKI-LSLDRDILGTEGTTALHYAVEAERLEAVR 240

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>POLG_HCVCO (Q9WMX2) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3009

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
            PP+    PLP  +AP  P PR   TV +S  +   A+A
Sbjct: 2307 PPVVHGCPLPPAKAPPIPPPRRKRTVVLSESTVSSALA 2344

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>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 187 SFPPISPAAPLPHLQAPSPPSPRP 258
           S PP  PA P P    P PP+PRP
Sbjct: 121 SAPPPPPARPPPPPPPPPPPAPRP 144

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>KIF17_HUMAN (Q9P2E2) Kinesin-like protein KIF17 (KIF3-related motor protein)|
          Length = 1029

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
 Frame = +1

Query: 64   PSLWKKKKQMARSNQNTQD*MSNY----------GAHARSLVPHRFYCTTTSFPPISPAA 213
            P++ + + ++  S  N+++  SNY             AR  + H       S P +S  +
Sbjct: 929  PNMEEDRYRLMLSRSNSENIASNYFRSKRASQILSTDARKSLTHHNSPPGLSCP-LSNNS 987

Query: 214  PLPHLQAPSPPSPRPLGTVTISCPST 291
             +P  QAP  P PRP    ++  P T
Sbjct: 988  AIPPTQAPEMPQPRPFRLESLDIPFT 1013

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>VP61_NPVOP (O10270) 61 kDa protein homolog|
          Length = 474

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCP 285
           TTS PP  P   L     P PP P P+  +  S P
Sbjct: 294 TTSMPPPPPMVDLATSMPPPPPPPPPMVDLATSMP 328

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>Y3215_MYCBO (Q7TX22) UPF0182 protein Mb3215c|
          Length = 992

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
 Frame = +1

Query: 136  GAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPP-----SPRPLGTVTIS 279
            GA A  + P     T  + PP   A P P    P PP      P P+G VT+S
Sbjct: 898  GATATGIAP-----TEAAVPPSPAANPPPPASGPQPPPVTAAPPVPVGAVTLS 945

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>Y3193_MYCTU (O53339) UPF0182 protein Rv3193c/MT3285|
          Length = 992

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
 Frame = +1

Query: 136  GAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPP-----SPRPLGTVTIS 279
            GA A  + P     T  + PP   A P P    P PP      P P+G VT+S
Sbjct: 898  GATATGIAP-----TEAAVPPSPAANPPPPASGPQPPPVTAAPPVPVGAVTLS 945

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>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2) (EBNA2)
          Length = 451

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           S P ++P  PL     P+PP+P P  T+T+    T P
Sbjct: 150 SQPRLTPPQPLMMPPRPTPPTPLPPATLTVPPRPTRP 186

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>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
          Length = 1129

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 178 TTTSFPPISPAAPLPHLQAPSPPSPRPL 261
           T +S P I P A  P  Q P PP P+ L
Sbjct: 535 TASSVPVIPPVAEAPSYQGPPPPYPKHL 562

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>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB|
            sensitivity-inducing factor large subunit) (DSIF large
            subunit)
          Length = 1078

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 160  PHRFYCTTTSFPPISPAAPLPHLQAPSP-PSPRPLGTVTISCPSTY 294
            P   Y +  S+ P +P+        PSP PSP P+G +    PSTY
Sbjct: 906  PGTLYGSDRSYSPFNPS--------PSPAPSPYPVGYMNTPSPSTY 943

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>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 157 VPHRFYCTTTSFPPISPA-APLPHLQAPSPPSPRPLGTVTISCPSTYPAI 303
           +P  F   T   PP SP  +P P   +P PPSP P        PST P I
Sbjct: 50  IPSPFDGPTFVLPPPSPLPSPPPPSPSPPPPSPSP------PPPSTIPLI 93

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>POLG_HCVTW (P29846) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3009

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
            PP+    PLP ++AP  P PR   TV ++  +   A+A
Sbjct: 2307 PPVVHGCPLPPVKAPPIPPPRRKRTVVLTESTVSSALA 2344

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>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2)
          Length = 487

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 187 SFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           S P ++P  PL     P+PP+P P  T+T+    T P
Sbjct: 184 SQPRLTPPQPLMMPPRPTPPTPLPPATLTVPPRPTRP 220

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>FBRL_CAEEL (Q22053) Fibrillarin|
          Length = 352

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 260 KGRGEGGDGAWRCGNGAAGEI-GGKLVVVQ*NRWG 159
           +G   GG G+ R G G AG + GGK VVV+ +R G
Sbjct: 91  RGSPRGGRGSPRGGRGGAGGMRGGKTVVVEPHRLG 125

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>MEX67_CANAL (P84149) mRNA export factor MEX67|
          Length = 617

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
 Frame = +1

Query: 181 TTSFP------PISPAAPLPHLQAPSPPSPRPLGTVT---ISCPSTYPAIA 306
           T+ FP      P +P A  P + A S PSP P  T+T   ++ P T P  A
Sbjct: 503 TSDFPWKVQKLPSNPTAATPGVSATSTPSPLPPTTITTPQLAPPGTGPTTA 553

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>PG44_MYCTU (Q50630) Hypothetical PE-PGRS family protein PE_PGRS44|
          Length = 543

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 251 GEGGDGAWRCGNGAAGEIGG 192
           G GG G W  GNG AG  GG
Sbjct: 182 GAGGAGGWLLGNGGAGGPGG 201

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>ATF5_RAT (Q6P788) Cyclic AMP-dependent transcription factor ATF-5|
           (Activating transcription factor 5) (Transcription
           factor ATFx)
          Length = 281

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 169 FYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPST 291
           F+      PP SP  P P   APS P P PL T  +  P T
Sbjct: 115 FFLDAPLLPPPSPPPPPP--PAPSLPLPLPLPTFDLPQPPT 153

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>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 591

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
 Frame = +1

Query: 43  KEQNTKRPSLWKKKKQMARSNQNTQD*MSNYG--AHARSLVPHRFYCTTTSF-PPISPAA 213
           ++Q   R    + + +  R  +  Q   SN    AHA  +   R         PP  P A
Sbjct: 18  QQQQRAREEQERLRLEREREREQEQKRASNLARLAHALPVEEPRIEAPPLPLSPPAPPPA 77

Query: 214 PLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           P P L  P+P +  P+  VT S  S  P
Sbjct: 78  PPPPLATPAPLTVIPIPVVTNSPQSLPP 105

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +1

Query: 130 NYGAHARSLVPHRFYCTTTSFPPISPAAPLPHLQAPSPPSPRPLGTV 270
           N   H  S  P   Y      PP +P  P P   AP+PP P P  T+
Sbjct: 498 NNAYHTSSPPPAPIYTP----PPPAPHCPPPPPSAPTPPIPSPPSTL 540

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>POLG_HCVJA (P26662) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3009

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 193  PPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
            PP+    PLP  +AP  P PR   TV ++  +   A+A
Sbjct: 2307 PPVVHGCPLPSTKAPPIPPPRRKRTVVLTESTVSSALA 2344

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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 184 TSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYP 297
           T   P   A P+P   +P+PP PRP    T+  P   P
Sbjct: 806 TKMSPKPDAKPMPK-GSPTPPGPRPTAGQTVPTPQQSP 842

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 393 SVHHHHLDDPGVNPHEPRP 449
           S HHHH D PG  P  P P
Sbjct: 169 SSHHHHQDPPGGGPPSPPP 187

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>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 181 TTSFPPISPAAPLPHLQAPSPPSPRPLGTVTISCPSTYPAIA 306
           T  F P +PAA      A  P +P P  T+T + PS + +IA
Sbjct: 187 TLPFTPATPAATTAG--ATQPAAPTPTATITSTGPSLFASIA 226

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>HSP12_ORYSA (Q943E6) 16.9 kDa class I heat shock protein 2|
          Length = 150

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPE+   +   AG  +G L VTVPK
Sbjct: 108 RFRLPENAKVDQVKAGMENGVLTVTVPK 135

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>HSP11_ORYSA (P27777) 16.9 kDa class I heat shock protein 1|
          Length = 150

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 341 RYRLPEDCCPELAMAGYVDGQLIVTVPK 258
           R+RLPE+   +   AG  +G L VTVPK
Sbjct: 108 RFRLPENAKVDQVKAGLENGVLTVTVPK 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,569,300
Number of Sequences: 219361
Number of extensions: 1529133
Number of successful extensions: 9963
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 7137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9584
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result