ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13h20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106550.1| Zea mays PCO072930 mRNA sequence Length = 855 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 519 gacgtcggtgtccgccgggagcggcagctccagcaccttgctgtacacgtgcggcaggcg 460 Query: 573 gcggaggaccttcttg 588 |||||| |||||||| Sbjct: 459 ccggaggtccttcttg 444
>ref|XM_470270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 126 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 67 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 66 ccggagatccttcttg 51 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 400 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 341 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 340 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 281 Query: 368 cgtc 371 |||| Sbjct: 280 cgtc 277
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 3178119 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 3178178 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 3178179 ccggagatccttcttg 3178194 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 3177845 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 3177904 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 3177905 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 3177964 Query: 368 cgtc 371 |||| Sbjct: 3177965 cgtc 3177968 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tgaacagttctcttccccaa 36 |||||||||||||||||||| Sbjct: 9894223 tgaacagttctcttccccaa 9894242 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 8078933 cgtcgccgccttcgccgcgt 8078914 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 7061360 acgtcggcgtccgcggggggcggc 7061383
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 101132 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 101191 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 101192 ccggagatccttcttg 101207 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 100858 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 100917 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 100918 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 100977 Query: 368 cgtc 371 |||| Sbjct: 100978 cgtc 100981
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 3178230 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 3178289 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 3178290 ccggagatccttcttg 3178305 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 3177956 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 3178015 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 3178016 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 3178075 Query: 368 cgtc 371 |||| Sbjct: 3178076 cgtc 3178079 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tgaacagttctcttccccaa 36 |||||||||||||||||||| Sbjct: 9892344 tgaacagttctcttccccaa 9892363 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 8076768 cgtcgccgccttcgccgcgt 8076749 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 7059255 acgtcggcgtccgcggggggcggc 7059278
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 2992 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 3051 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 3052 ccggagatccttcttg 3067 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 2718 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 2777 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 2778 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 2837 Query: 368 cgtc 371 |||| Sbjct: 2838 cgtc 2841
>dbj|AK099400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B14, full insert sequence Length = 849 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 178 gacgtcggtgtccgccgggaacggcagctccagcaccttgctgtagacgtgcggcagccg 119 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 118 ccggagatccttcttg 103 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 452 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 393 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 392 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 333 Query: 368 cgtc 371 |||| Sbjct: 332 cgtc 329
>dbj|AK120519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124C22, full insert sequence Length = 894 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttgctgtacacgtgcggcagccg 572 |||||||| |||||| |||| ||||| ||| |||||||||||||| |||||||||||||| Sbjct: 217 gacgtcggtgtccgccgggaacggcacctccagcaccttgctgtagacgtgcggcagccg 158 Query: 573 gcggaggaccttcttg 588 ||||| |||||||| Sbjct: 157 ccggagatccttcttg 142 Score = 71.9 bits (36), Expect = 2e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 248 cgccgcgtcccttgggcaccgtcacgataagctgcccgtcgacgtacccggccatagcca 307 ||||||| ||||||||||| || |||| ||||| |||| |||||| ||||||| |||| Sbjct: 491 cgccgcgccccttgggcacggtgacgacgagctggccgttgacgtagccggccacggcca 432 Query: 308 gctccgggcaacaatcttcaggcagccggtacctccacctgtcaagctccatgtcgtcgc 367 | ||||||| | | || ||||||||| |||||||| |||| ||||||||||||||| Sbjct: 431 tcgccgggcagctcgcctccggcagccgggacctccacttgtcgagctccatgtcgtcgt 372 Query: 368 cgtc 371 |||| Sbjct: 371 cgtc 368
>ref|XM_476781.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttg 552 ||||||||||||||||| || ||| ||||||||||||||| Sbjct: 162 gacgtcggcgtccgcggcgaacgggagctcgagcaccttg 123
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttg 552 ||||||||||||||||| || ||| ||||||||||||||| Sbjct: 3876119 gacgtcggcgtccgcggcgaacgggagctcgagcaccttg 3876080 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 16274112 cgccgtcctcgccgccgcctccgg 16274135 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 gtcgccgtgggtcgtcgtcg 613 |||||||||||||||||||| Sbjct: 8380976 gtcgccgtgggtcgtcgtcg 8380995
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 513 gacgtcggcgtccgcggggagcggcagctcgagcaccttg 552 ||||||||||||||||| || ||| ||||||||||||||| Sbjct: 115231 gacgtcggcgtccgcggcgaacgggagctcgagcaccttg 115192
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 362 cgtcgccgtcctcgccgccgtctccggtccca 393 |||||||||||||||||||| |||||| |||| Sbjct: 2865444 cgtcgccgtcctcgccgccgcctccggcccca 2865475
>emb|AJ621744.1| Gallus gallus gene for hypothetical protein, BAC bCHORI92M14 clone, contig 5 Length = 68491 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tttatggaaaaagaagaaacaaa 91 ||||||||||||||||||||||| Sbjct: 15998 tttatggaaaaagaagaaacaaa 16020
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 362 cgtcgccgtcctcgccgccgtctccgg 388 |||||||||||||||||||| |||||| Sbjct: 14992833 cgtcgccgtcctcgccgccgcctccgg 14992859 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 362 cgtcgccgtcctcgccgccgtctccgg 388 |||||||||||||||||||| |||||| Sbjct: 14992024 cgtcgccgtcctcgccgccgcctccgg 14991998 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 16220811 gtcgtcgtcgtcctcgccgccgtc 16220788 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccccgtcgccgccttcgccgcgtc 256 |||||||||||||| ||||||||| Sbjct: 12311332 ccccgtcgccgcctacgccgcgtc 12311355
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 tgtcgtcgccgtcctcgccgccg 381 ||||||||||||||||||||||| Sbjct: 25109559 tgtcgtcgccgtcctcgccgccg 25109537 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 19191090 cgccgtcctcgccgccgcctccgg 19191067 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 19190816 cgccgtcctcgccgccgcctccgg 19190793 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 8820808 cgtcctcgccgccgtctccg 8820827
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 362 cgtcgccgtcctcgccgccgtctccgg 388 |||||||||||||||||||| |||||| Sbjct: 62279 cgtcgccgtcctcgccgccgcctccgg 62305 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 362 cgtcgccgtcctcgccgccgtctccgg 388 |||||||||||||||||||| |||||| Sbjct: 61470 cgtcgccgtcctcgccgccgcctccgg 61444
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 tgtcgtcgccgtcctcgccgccg 381 ||||||||||||||||||||||| Sbjct: 13734 tgtcgtcgccgtcctcgccgccg 13712
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 tgtcgtcgccgtcctcgccgccg 381 ||||||||||||||||||||||| Sbjct: 165675 tgtcgtcgccgtcctcgccgccg 165653
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 gcgtgcaccaccaccaccttg 414 ||||||||||||||||||||| Sbjct: 130987 gcgtgcaccaccaccaccttg 131007
>gb|AC136219.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073E05, complete sequence Length = 178013 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccgg 388 ||||||||||||||||||||| Sbjct: 58003 cgtcctcgccgccgtctccgg 58023
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tcgtcgccgtcctcgccgccg 381 ||||||||||||||||||||| Sbjct: 4161823 tcgtcgccgtcctcgccgccg 4161803
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccgg 388 ||||||||||||||||||||| Sbjct: 18584888 cgtcctcgccgccgtctccgg 18584908 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 6266271 cgccgtcctcgccgccgcctccgg 6266294
>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence Length = 193015 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ctcttccccaaatcaggaagg 46 ||||||||||||||||||||| Sbjct: 17264 ctcttccccaaatcaggaagg 17284
>dbj|AK073634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033047G07, full insert sequence Length = 3008 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccgg 388 ||||||||||||||||||||| Sbjct: 319 cgtcctcgccgccgtctccgg 339
>dbj|AK071425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096B08, full insert sequence Length = 1605 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccgg 388 ||||||||||||||||||||| Sbjct: 302 cgtcctcgccgccgtctccgg 322
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgcc 377 |||||||||||||||||||| Sbjct: 2877163 atgtcgtcgccgtcctcgcc 2877182
>gb|BC108793.1| Xenopus laevis cDNA clone MGC:132140 IMAGE:6947290, complete cds Length = 3695 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgagcttcccaccaatctcc 204 |||||||||||||||||||| Sbjct: 764 cgagcttcccaccaatctcc 745
>ref|XM_482280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 85 cgccgtcctcgccgccgcctccgg 62
>ref|NM_188575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1794 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgccgccg 381 |||||||||||||| ||||||||| Sbjct: 1 atgtcgtcgccgtcgtcgccgccg 24
>ref|XM_480945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 378 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 265 cgtcctcgccgccgtctccg 246
>ref|XM_470631.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1773 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 1484 acgtcggcgtccgcggggggcggc 1507
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccccgtcgccgccttcgccgcgtc 256 |||||||||||||| ||||||||| Sbjct: 210 ccccgtcgccgcctacgccgcgtc 233
>ref|NM_186853.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1716 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 gtcgccgtgggtcgtcgtcg 613 |||||||||||||||||||| Sbjct: 831 gtcgccgtgggtcgtcgtcg 812
>gb|BT016723.1| Zea mays clone Contig556 mRNA sequence Length = 1476 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ccccgtcgccgccttcgccg 252 |||||||||||||||||||| Sbjct: 498 ccccgtcgccgccttcgccg 517
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 cgccctgacgtcggcgtccg 526 |||||||||||||||||||| Sbjct: 4188541 cgccctgacgtcggcgtccg 4188560
>ref|XM_873598.1| PREDICTED: Bos taurus similar to Nidogen precursor (Entactin), transcript variant 2 (LOC534319), mRNA Length = 5274 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 cgaagaagtggagcgcagtg 495 |||||||||||||||||||| Sbjct: 199 cgaagaagtggagcgcagtg 180
>ref|XM_614049.2| PREDICTED: Bos taurus similar to Nidogen precursor (Entactin), transcript variant 1 (LOC534319), mRNA Length = 5673 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 cgaagaagtggagcgcagtg 495 |||||||||||||||||||| Sbjct: 199 cgaagaagtggagcgcagtg 180
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 96626 cgccgtcctcgccgccgcctccgg 96649
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tgtcgtcgccgtcctcgccg 378 |||||||||||||||||||| Sbjct: 2985899 tgtcgtcgccgtcctcgccg 2985880
>gb|AF335504.1| Oryza sativa (japonica cultivar-group) hemoglobin 1 (hb1), hemoglobin 3 (hb3), and hemoglobin 4 (hb4) genes, complete cds Length = 11601 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 1171 acgtcggcgtccgcggggggcggc 1194
>ref|XM_800552.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509039.30) partial mRNA Length = 1500 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gcgtgcaccaccaccacctt 413 |||||||||||||||||||| Sbjct: 345 gcgtgcaccaccaccacctt 326
>gb|AC002342.1|ATAC002342 Arabidopsis thaliana chromosome V BAC T19K24 genomic sequence, complete sequence Length = 82359 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gaaaaagaagaaacaaatgg 94 |||||||||||||||||||| Sbjct: 48844 gaaaaagaagaaacaaatgg 48825
>gb|BC043749.1| Xenopus laevis FYN oncogene related to SRC, FGR, YES, mRNA (cDNA clone MGC:52878 IMAGE:4888752), complete cds Length = 3499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgagcttcccaccaatctcc 204 |||||||||||||||||||| Sbjct: 554 cgagcttcccaccaatctcc 535
>gb|AY281354.1| Uncultured Acidobacteria bacterium clone 38c7 genomic sequence Length = 39263 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 tcgccgtcctcgccgccgtc 383 |||||||||||||||||||| Sbjct: 17446 tcgccgtcctcgccgccgtc 17465
>gb|AC146893.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1107B01, complete sequence Length = 160104 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 128318 cgtcgccgccttcgccgcgt 128299
>gb|AC146242.3| Pan troglodytes BAC clone CH251-163E9 from Y, complete sequence Length = 142863 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 55683 caagaagtaaccagaatact 55702
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 aaaagaagaaacaaatggca 96 |||||||||||||||||||| Sbjct: 17412 aaaagaagaaacaaatggca 17393
>ref|XM_505537.1| Yarrowia lipolytica CLIB122, YALI0F17468g predicted mRNA Length = 3408 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tccatgtcgtcgccgtcctc 374 |||||||||||||||||||| Sbjct: 802 tccatgtcgtcgccgtcctc 821
>emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348B13 on chromosome X Contains a pseudogene similar to part of SRI (sorcin) and a novel gene, complete sequence Length = 142689 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aagactagatgagcaattat 135 |||||||||||||||||||| Sbjct: 15168 aagactagatgagcaattat 15149
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 cgccctgacgtcggcgtccg 526 |||||||||||||||||||| Sbjct: 29496 cgccctgacgtcggcgtccg 29515
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gcaccaccaccaccttgacg 417 |||||||||||||||||||| Sbjct: 260110 gcaccaccaccaccttgacg 260091
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 cgccctgacgtcggcgtccg 526 |||||||||||||||||||| Sbjct: 65522 cgccctgacgtcggcgtccg 65541
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 cgtcgccgtcctcgccgccg 381 |||||||||||||||||||| Sbjct: 3618584 cgtcgccgtcctcgccgccg 3618603
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 cgtcgccgccttcgccgcgtccct 259 |||||||||||||||||| ||||| Sbjct: 213030 cgtcgccgccttcgccgcctccct 213053
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 |||||||||||||||||| ||||| Sbjct: 185534 gtcgtcgccgtcctcgcctccgtc 185557
>emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative Bowman Bird trypsin inhibitor Length = 3036 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 1262 cgccgtcctcgccgccgcctccgg 1239
>dbj|BS000633.3| Pan troglodytes chromosome Y clone: PTB-483C22, complete sequence Length = 129300 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 22922 caagaagtaaccagaatact 22903
>dbj|BS000665.1| Pan troglodytes chromosome Y clone:PTB-114E01, complete sequences Length = 178566 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 173418 caagaagtaaccagaatact 173399
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 20297246 caagaagtaaccagaatact 20297265
>gb|AC105401.5| Homo sapiens BAC clone RP11-765K14 from 4, complete sequence Length = 30064 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ggaaaaagaagaaacaaatg 93 |||||||||||||||||||| Sbjct: 21791 ggaaaaagaagaaacaaatg 21772
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 21005 acgtcggcgtccgcggggggcggc 20982
>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome Length = 190289 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 |||||||||||| ||||||||||| Sbjct: 16221 gtcgtcgccgtcgtcgccgccgtc 16244
>gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, complete sequence Length = 133225 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 gaacagttctcttccccaaa 37 |||||||||||||||||||| Sbjct: 21259 gaacagttctcttccccaaa 21240
>gb|U86894.1|MCU86894 Molluscum contagiosum virus subtype 1 clone B-M; B-N; B-L hypothetical protein (B-M,N,L.2), putative molecular chaperone (B-M,N,L.3), hypothetical protein (B-M,N,L.4), hypothetical protein (B-M,N,L.5), homolog of vaccinia F9L (B-M,N,L.6), homolog of vaccinia F10L (B-M,N,L.7) and homolog of vaccinia F11L (B-M,N,L.8) genes, complete cds, and homolog of vaccinia F12L (B-M,N,L.9) gene, partial cds Length = 8441 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 |||||||||||| ||||||||||| Sbjct: 62 gtcgtcgccgtcgtcgccgccgtc 85
>gb|AC157496.3| Pan troglodytes BAC clone CH251-564E6 from chromosome unknown, complete sequence Length = 213433 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccaccaatctcccccgctgc 212 |||||||||||||||||||| Sbjct: 83961 ccaccaatctcccccgctgc 83942
>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I, complete sequence Length = 691920 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tcgccgtcctcgccgccgtc 383 |||||||||||||||||||| Sbjct: 296818 tcgccgtcctcgccgccgtc 296799
>gb|AC034220.5| Homo sapiens chromosome 5 clone CTD-2049H4, complete sequence Length = 146797 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ccaccaatctcccccgctgc 212 |||||||||||||||||||| Sbjct: 90461 ccaccaatctcccccgctgc 90442
>gb|AC012177.6| Homo sapiens chromosome 16 clone RP11-231O22, complete sequence Length = 186687 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 tggagcgcagtggtgccctcgaac 507 ||||| |||||||||||||||||| Sbjct: 46324 tggagtgcagtggtgccctcgaac 46347
>gb|AC026716.5|AC026716 Homo sapiens chromosome 5 clone CTD-2140M5, complete sequence Length = 115383 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 gaacagttctcttccccaaa 37 |||||||||||||||||||| Sbjct: 39333 gaacagttctcttccccaaa 39314
>gb|AC010728.4|AC010728 Homo sapiens BAC clone RP11-258E22 from Y, complete sequence Length = 16170 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aagactagatgagcaattat 135 |||||||||||||||||||| Sbjct: 12058 aagactagatgagcaattat 12039
>gb|AC008288.8|AC008288 Drosophila melanogaster, chromosome 2R, region 42E-42E, BAC clone BACR36G11, complete sequence Length = 174751 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 caccaccaccttgacgaccc 421 |||||||||||||||||||| Sbjct: 130062 caccaccaccttgacgaccc 130043
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gaaaaagaagaaacaaatgg 94 |||||||||||||||||||| Sbjct: 16109154 gaaaaagaagaaacaaatgg 16109173 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 12976348 cgtcctcgccgccgtctccg 12976367 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 2251710 gtcgtcgtcgtcctcgccgccgtc 2251733
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 6765087 cgtcgccgccttcgccgcgt 6765068
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 7969421 cgccgtcctcgccgccgcctccgg 7969444
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgccgccg 381 |||||||||||||| ||||||||| Sbjct: 7037384 atgtcgtcgccgtcgtcgccgccg 7037407
>gb|AC009342.5|AC009342 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone BACR29G01, complete sequence Length = 165855 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caccaccaccttgacgaccc 421 |||||||||||||||||||| Sbjct: 20835 caccaccaccttgacgaccc 20854
>gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complete sequence Length = 127148 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tatggaaaaagaagaaacaa 90 |||||||||||||||||||| Sbjct: 31559 tatggaaaaagaagaaacaa 31540
>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete sequence Length = 200403 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 11054 caagaagtaaccagaatact 11035
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 10363 cgtcgccgccttcgccgcgt 10344
>gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y, complete sequence Length = 166347 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 aagactagatgagcaattat 135 |||||||||||||||||||| Sbjct: 162429 aagactagatgagcaattat 162410
>gb|AC016710.7| Homo sapiens BAC clone RP11-241E11 from 2, complete sequence Length = 95836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tggaaaaagaagaaacaaat 92 |||||||||||||||||||| Sbjct: 56927 tggaaaaagaagaaacaaat 56908
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 agccccgtcgccgccttcgc 250 |||||||||||||||||||| Sbjct: 538334 agccccgtcgccgccttcgc 538315
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gagcggcagctcgagcacct 550 |||||||||||||||||||| Sbjct: 3634588 gagcggcagctcgagcacct 3634607
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tgaacagttctcttccccaa 36 |||||||||||||||||||| Sbjct: 56612 tgaacagttctcttccccaa 56631
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 132978 acgtcggcgtccgcggggggcggc 132955
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgccgccg 381 |||||||||||||| ||||||||| Sbjct: 24964 atgtcgtcgccgtcgtcgccgccg 24987
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgccgccg 381 |||||||||||||| ||||||||| Sbjct: 159202 atgtcgtcgccgtcgtcgccgccg 159225
>gb|AF316992.1| Discula destructiva virus 1 segment 1, complete sequence Length = 1787 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 422 cggggtaaatcctcacgagccgcg 445 |||||||||||| ||||||||||| Sbjct: 746 cggggtaaatccacacgagccgcg 723
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 ctttatggaaaaagaagaaa 87 |||||||||||||||||||| Sbjct: 115145 ctttatggaaaaagaagaaa 115164
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 gtcgccgtgggtcgtcgtcg 613 |||||||||||||||||||| Sbjct: 86074 gtcgccgtgggtcgtcgtcg 86093
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 98557 cgtcctcgccgccgtctccg 98576
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 4451 cgtcctcgccgccgtctccg 4470
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 |||| ||||||||||||||||||| Sbjct: 4548008 gtcgccgccgtcctcgccgccgtc 4547985
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 76939 cgccgtcctcgccgccgcctccgg 76962
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 37327 gtcgtcgtcgtcctcgccgccgtc 37304
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 125412 gtcgtcgtcgtcctcgccgccgtc 125389
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ccccgtcgccgccttcgccgcgtc 256 |||||||||||||| ||||||||| Sbjct: 94886 ccccgtcgccgcctacgccgcgtc 94909
>dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K23L20 Length = 81729 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gaaaaagaagaaacaaatgg 94 |||||||||||||||||||| Sbjct: 53502 gaaaaagaagaaacaaatgg 53521
>dbj|AK121769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C05, full insert sequence Length = 2612 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 1349 gtcgtcgtcgtcctcgccgccgtc 1326
>dbj|AK119506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-F05, full insert sequence Length = 2042 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 384 cgtcgccgccttcgccgcgt 403
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 113455 cgccgtcctcgccgccgcctccgg 113432 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 113181 cgccgtcctcgccgccgcctccgg 113158
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 594 gtcgccgtgggtcgtcgtcg 613 |||||||||||||||||||| Sbjct: 12569 gtcgccgtgggtcgtcgtcg 12588
>gb|AC158406.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone P0047E03, complete sequence Length = 156641 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 98364 cgtcgccgccttcgccgcgt 98345
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 365 cgccgtcctcgccgccgtctccgg 388 ||||||||||||||||| |||||| Sbjct: 94550 cgccgtcctcgccgccgcctccgg 94573
>dbj|AK109461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C09, full insert sequence Length = 3605 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 2224 gtcgtcgtcgtcctcgccgccgtc 2201
>dbj|AK108855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-B01, full insert sequence Length = 2413 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 1682 acgtcggcgtccgcggggggcggc 1705
>dbj|AK103247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123K23, full insert sequence Length = 2307 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 atgtcgtcgccgtcctcgccgccg 381 |||||||||||||| ||||||||| Sbjct: 283 atgtcgtcgccgtcgtcgccgccg 306
>gb|AC006989.3|AC006989 Homo sapiens BAC clone RP11-225B4 from Y, complete sequence Length = 157666 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagaagtaaccagaatact 114 |||||||||||||||||||| Sbjct: 155750 caagaagtaaccagaatact 155731
>dbj|AK072396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081G15, full insert sequence Length = 2223 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 acgtcggcgtccgcggggagcggc 537 |||||||||||||||||| ||||| Sbjct: 1818 acgtcggcgtccgcggggggcggc 1841
>ref|NM_207868.1| Eremothecium gossypii AAL027Wp (AAL027W), mRNA Length = 1779 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tcgccgtcctcgccgccgtc 383 |||||||||||||||||||| Sbjct: 1202 tcgccgtcctcgccgccgtc 1183
>emb|BX537286.4| Zebrafish DNA sequence from clone DKEY-28J4 in linkage group 4, complete sequence Length = 179930 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 agtaccccaccggttctattgcac 179 |||||||||||||| ||||||||| Sbjct: 75178 agtaccccaccggtcctattgcac 75155
>dbj|AK061523.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B07, full insert sequence Length = 1327 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 344 cgtcgccgccttcgccgcgt 363
>dbj|AK061138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B07, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 260 cgtcgccgccttcgccgcgt 279
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 caccaccaccttgacgaccc 421 |||||||||||||||||||| Sbjct: 266767 caccaccaccttgacgaccc 266786
>dbj|AP003060.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-628J23, complete sequence Length = 165097 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 gaaggagcagaacacaaagc 61 |||||||||||||||||||| Sbjct: 134464 gaaggagcagaacacaaagc 134483
>gb|BC084432.1| Xenopus laevis hypothetical LOC495279, mRNA (cDNA clone MGC:86484 IMAGE:5511385), complete cds Length = 5503 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ggcagccggtacctccacct 347 |||||||||||||||||||| Sbjct: 4194 ggcagccggtacctccacct 4175
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 525 cgcggggagcggcagctcgagcac 548 ||||| |||||||||||||||||| Sbjct: 883963 cgcggcgagcggcagctcgagcac 883940
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 catgtcgtcgccgtcctcgc 376 |||||||||||||||||||| Sbjct: 1716195 catgtcgtcgccgtcctcgc 1716214
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tgtcgtcgccgtcctcgccg 378 |||||||||||||||||||| Sbjct: 666131 tgtcgtcgccgtcctcgccg 666112
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgtcgccgccttcgccgcgt 255 |||||||||||||||||||| Sbjct: 6767473 cgtcgccgccttcgccgcgt 6767454
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gaaaaagaagaaacaaatgg 94 |||||||||||||||||||| Sbjct: 16062387 gaaaaagaagaaacaaatgg 16062406 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 12930622 cgtcctcgccgccgtctccg 12930641 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 2251654 gtcgtcgtcgtcctcgccgccgtc 2251677
>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148110 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cgtcctcgccgccgtctccg 387 |||||||||||||||||||| Sbjct: 91622 cgtcctcgccgccgtctccg 91603
>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165955 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gaaaaagaagaaacaaatgg 94 |||||||||||||||||||| Sbjct: 134189 gaaaaagaagaaacaaatgg 134170
>emb|CR533581.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0062G09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 28333 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 gtcgtcgccgtcctcgccgccgtc 383 ||||||| |||||||||||||||| Sbjct: 25102 gtcgtcgtcgtcctcgccgccgtc 25079
>emb|AJ811966.1| Uncultured prokaryote o02 gene for ester hydrolase Length = 3006 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gcgtgcaccaccaccacctt 413 |||||||||||||||||||| Sbjct: 1847 gcgtgcaccaccaccacctt 1866
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tccatgtcgtcgccgtcctc 374 |||||||||||||||||||| Sbjct: 2333388 tccatgtcgtcgccgtcctc 2333407
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 gcagccggcggaggaccttc 585 |||||||||||||||||||| Sbjct: 922427 gcagccggcggaggaccttc 922408
>emb|AL589652.13| Mouse DNA sequence from clone RP23-369L6 on chromosome X, complete sequence Length = 199294 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tctttatggaaaaagaagaaacaa 90 |||||| ||||||||||||||||| Sbjct: 4609 tctttagggaaaaagaagaaacaa 4586
>dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727F15, complete sequences Length = 184802 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 cggcgtccgcggggagcggc 537 |||||||||||||||||||| Sbjct: 82530 cggcgtccgcggggagcggc 82511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,138,578 Number of Sequences: 3902068 Number of extensions: 5138578 Number of successful extensions: 157308 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153048 Number of HSP's gapped (non-prelim): 4253 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
