Clone Name | rbasd13h18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RR7_ASTLO (P14760) Plastid 30S ribosomal protein S7 | 31 | 6.2 | 2 | DNAA_MYCGE (P35888) Chromosomal replication initiator protein dnaA | 30 | 8.2 |
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>RR7_ASTLO (P14760) Plastid 30S ribosomal protein S7| Length = 178 Score = 30.8 bits (68), Expect = 6.2 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = +2 Query: 38 LVNKMQRQGQLNTIFV*TKLETRRESPSKDLLKSSKRQKNKN 163 L + +++GQ++ I + TKLE R + K ++ S+K++ KN Sbjct: 75 LRTQKRKKGQISKISIKTKLERRNKIALKFIINSAKKRSEKN 116
>DNAA_MYCGE (P35888) Chromosomal replication initiator protein dnaA| Length = 437 Score = 30.4 bits (67), Expect = 8.2 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 611 NGGNNK*YVQQNFLHSDGNKTIFNKGMRI 697 N G +K Y QNF+ S+GNK + G+R+ Sbjct: 98 NSGLSKNYTFQNFVISEGNKRAYEAGVRL 126 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 117,236,076 Number of Sequences: 219361 Number of extensions: 2225649 Number of successful extensions: 4109 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3973 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4109 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 10514051625 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)