ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T... 123 1e-24
2gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CON... 109 2e-20
3gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONS... 82 4e-12
4emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16) 78 6e-11
5dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox ... 72 3e-09
6emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenes... 66 2e-07
7dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ... 62 3e-06
8emb|AJ841698.1| Poa pratensis serk1 gene for somatic embryogenes... 60 1e-05
9gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB fl... 54 8e-04
10gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB fl... 54 8e-04
11gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 54 8e-04
12gb|CP000013.1| Borrelia garinii PBi, complete genome 46 0.20
13gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cance... 46 0.20
14emb|AL133284.13| Human DNA sequence from clone RP11-67K19 on chr... 44 0.79
15gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosom... 44 0.79
16gb|AC097524.2| Homo sapiens BAC clone RP11-604B8 from 4, complet... 44 0.79
17emb|BX470176.11| Zebrafish DNA sequence from clone CH211-120C23 ... 44 0.79
18gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete... 42 3.1
19gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete... 42 3.1
20gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, comple... 42 3.1
21gb|AC185538.1| Drosophila melanogaster clone BACR04D19, complete... 42 3.1
22gb|CP000001.1| Bacillus cereus E33L, complete genome 42 3.1
23gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete se... 42 3.1
24gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete s... 42 3.1
25gb|AC087363.17| Homo sapiens chromosome 8, clone RP11-529P14, co... 42 3.1
26emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 ... 42 3.1
27emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 42 3.1
28gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, comp... 42 3.1
29gb|AF355270.1| Balaena mysticetus haplotype OOO mitochondrial co... 42 3.1
30gb|AF355268.1| Balaena mysticetus haplotype MMM mitochondrial co... 42 3.1
31gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gen... 42 3.1
32dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 42 3.1
33gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, comp... 42 3.1
34gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Can... 42 3.1
35gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana... 42 3.1
36gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana... 42 3.1
37emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fructosidase 42 3.1
38emb|CR751567.7| Zebrafish DNA sequence from clone DKEY-47I3 in l... 42 3.1
39emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 ... 42 3.1
40gb|AC011595.13| Homo sapiens 12 BAC RP11-114F10 (Roswell Park Ca... 42 3.1
41gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 ... 42 3.1
42emb|AL135841.11| Human DNA sequence from clone RP11-327L3 on chr... 42 3.1
43gb|DQ145045.1| Balaena mysticetus voucher BmysNEPSB1 control reg... 42 3.1
44gb|AC172877.1| Brassica rapa subsp. pekinensis clone KBrH042F19,... 42 3.1
45gb|L35617.1|CPQFRA Caperea marginata (individual isolate NZ01) D... 42 3.1
46emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chr... 42 3.1 
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
             genes, complete cds; and unknown gene
          Length = 43606

 Score =  123 bits (62), Expect = 1e-24
 Identities = 122/141 (86%), Gaps = 4/141 (2%)
 Strand = Plus / Plus

                                                                         
Query: 483   cgttcacaaatataagatgtt-taacnnnnnnnngattcggatgtata--gacgcatttt 539
             ||||||||||||||||||||| ||||        ||||||||||||||  ||||||||||
Sbjct: 40284 cgttcacaaatataagatgttctaacttttttctgattcggatgtatatagacgcatttt 40343

                                                                         
Query: 540   agtgtgtttgatcactcatttcagtccgtatatagtccatattgaaatatagaaaacatc 599
             || ||||||| ||||||||||||||| |||| ||||||||||||||||||  ||||||||
Sbjct: 40344 ag-gtgtttgttcactcatttcagtctgtatgtagtccatattgaaatatccaaaacatc 40402

                                  
Query: 600   ttatacttgtgaacggaggga 620
             ||||| ||| |||||||||||
Sbjct: 40403 ttatatttgggaacggaggga 40423



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/70 (87%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                         
Query: 765   gtttgatcactcatttcagtccgtatatagtccatattggaaatatanaaaacattttat 824
             ||||| ||||||||||||||| |||| ||||||||||| |||||||  ||||||| ||||
Sbjct: 40348 gtttgttcactcatttcagtctgtatgtagtccatatt-gaaatatccaaaacatcttat 40406

                       
Query: 825   acttgtgaac 834
             | ||| ||||
Sbjct: 40407 atttgggaac 40416



 Score = 46.1 bits (23), Expect = 0.20
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 594   aacatcttatacttgtgaacggaggga 620
             ||||||||||| |||||||||||||||
Sbjct: 40304 aacatcttatatttgtgaacggaggga 40278
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>gb|AF490468.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein
           (CO1) gene, complete cds
          Length = 4071

 Score =  109 bits (55), Expect = 2e-20
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                       
Query: 534 cattttagtgtgtttgatcactcatttcagtccgtatatagtccatattgaaatatagaa 593
           |||||||||||||||| ||||| |||||||||||||| ||||||| ||| ||||||  ||
Sbjct: 116 cattttagtgtgtttgttcacttatttcagtccgtatgtagtccacattaaaatatctaa 57

                                      
Query: 594 aacatcttatacttgtgaacggaggga 620
           ||||||||||| |||||||||||||||
Sbjct: 56  aacatcttatatttgtgaacggaggga 30



 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 532  cgcattttagtgtgtttgatcactcatttcagtccgtatatagtccatattgaaatatag 591
            |||||||||||||||||| || |||||||| |||| ||| |||||||| |||||||||  
Sbjct: 2992 cgcattttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatcc 2933

                                         
Query: 592  aaaacatcttatacttgtgaacggaggga 620
            ||||| ||||||| | ||||| |||||||
Sbjct: 2932 aaaacgtcttataatagtgaatggaggga 2904



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 71/82 (86%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                       
Query: 753 cattttagtgtggtttgatcactcatttcagtccgtatatagtccatattggaaatatan 812
           |||||||||||| |||| ||||| |||||||||||||| ||||||| |||  ||||||  
Sbjct: 116 cattttagtgtg-tttgttcacttatttcagtccgtatgtagtccacatt-aaaatatct 59

                                 
Query: 813 aaaacattttatacttgtgaac 834
           ||||||| ||||| ||||||||
Sbjct: 58  aaaacatcttatatttgtgaac 37



 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 483 cgttcacaaatataagatgttt 504
           ||||||||||||||||||||||
Sbjct: 36  cgttcacaaatataagatgttt 57



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 751  cgcattttagtgtggtttgatcactcatttcagtccgtatatagtccat 799
            ||||||||||||| ||||| || |||||||| |||| ||| ||||||||
Sbjct: 2992 cgcattttagtgt-gtttgttcgctcatttcggtccttatgtagtccat 2945
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>gb|AF490467.1| Hordeum vulgare subsp. vulgare cultivar Igri CONSTANS-like protein
            (CO1) gene, complete cds
          Length = 2252

 Score = 81.8 bits (41), Expect = 4e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 532  cgcattttagtgtgtttgatcactcatttcagtccgtatatagtccatattgaaatatag 591
            |||||||||||||||||| || |||||||| |||| ||| |||||||| |||||||||  
Sbjct: 1597 cgcattttagtgtgtttgttcgctcatttcggtccttatgtagtccatcttgaaatatcc 1538

                                         
Query: 592  aaaacatcttatacttgtgaacggaggga 620
            ||||| ||||||| | ||||| |||||||
Sbjct: 1537 aaaacgtcttataatagtgaatggaggga 1509



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 43/49 (87%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 751  cgcattttagtgtggtttgatcactcatttcagtccgtatatagtccat 799
            ||||||||||||| ||||| || |||||||| |||| ||| ||||||||
Sbjct: 1597 cgcattttagtgt-gtttgttcgctcatttcggtccttatgtagtccat 1550
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>emb|X66013.1|TACATHBG T.aestivum gene for cathepsin B (Al16)
          Length = 4792

 Score = 77.8 bits (39), Expect = 6e-11
 Identities = 52/55 (94%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                   
Query: 536  ttttagtgtgtttgatc-actcatttcagtccgtatatagtccatattgaaatat 589
            |||||||||||||| || |||||||||||||||||| ||||||||||||||||||
Sbjct: 2908 ttttagtgtgtttgttccactcatttcagtccgtatgtagtccatattgaaatat 2962



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 772  cactcatttcagtccgtatatagtccatattg 803
            ||||||||||||||||||| ||||||||||||
Sbjct: 2925 cactcatttcagtccgtatgtagtccatattg 2956
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>dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox protein, complete cds
          Length = 9086

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 551  tcactcatttcagtccgtatatagtccatattgaaatatagaaaacatcttatacttgtg 610
            |||||||||||||||||||| ||||||||| | ||||||  ||||||| ||||| |||||
Sbjct: 7994 tcactcatttcagtccgtatgtagtccatactaaaatatccaaaacatattatatttgtg 8053

                    
Query: 611  aacggagg 618
            || |||||
Sbjct: 8054 aatggagg 8061



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 526  tatagacgcattttagtgtgtttgatcactcatttcagtccgtatatagtccat 579
            ||||||| ||||| |||||||||| ||||||||||||||  |||| ||||||||
Sbjct: 7938 tatagacacatttgagtgtgtttgttcactcatttcagtttgtatgtagtccat 7991



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/63 (87%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 771  tcactcatttcagtccgtatatagtccatattggaaatatanaaaacattttatacttgt 830
            |||||||||||||||||||| ||||||||| |  ||||||  ||||||| ||||| ||||
Sbjct: 7994 tcactcatttcagtccgtatgtagtccatact-aaaatatccaaaacatattatatttgt 8052

               
Query: 831  gaa 833
            |||
Sbjct: 8053 gaa 8055
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>emb|AJ841697.1| Poa pratensis serk2 gene for somatic embryogenesis receptor-like
           kinase 2, exons 1-11, allele 1
          Length = 5290

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 528 tagacgcattttagtgtgtttgatcactcatttcagtccgtatatagtccatattgaaat 587
           ||||||| |||||||||||  | |||||| ||||||| ||||| ||||| | ||||||||
Sbjct: 644 tagacgctttttagtgtgtaggttcactcttttcagtgcgtatgtagtctacattgaaat 703

                            
Query: 588 atagaaaacatcttata 604
           || ||||| ||||||||
Sbjct: 704 atcgaaaatatcttata 720
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>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds
          Length = 9755

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                        
Query: 536  ttttagtgtgtttgatcactcatttcagtccgtatatagtccatattgaaatatagaaaa 595
            |||||||||||||| |||| |||||||||| |||| |||| |||||| ||||||  ||||
Sbjct: 8629 ttttagtgtgtttgttcacccatttcagtctgtatgtagtgcatattaaaatatccaaaa 8688

               
Query: 596  cat 598
            |||
Sbjct: 8689 cat 8691
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>emb|AJ841698.1| Poa pratensis serk1 gene for somatic embryogenesis receptor-like
           kinase 1, exons 1-11, allele 1
          Length = 5188

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 551 tcactcatttcagtccgtatatagtccatattgaaatatagaaaacatcttatacttgtg 610
           |||||| ||||||||| ||| ||||| | |||||||||| |||||||||| ||| ||  |
Sbjct: 638 tcactcttttcagtccatatgtagtctacattgaaatattgaaaacatctcataatttgg 697

                     
Query: 611 aacggaggga 620
           ||||||||||
Sbjct: 698 aacggaggga 707
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>gb|DQ257593.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 623

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 574 gtccatattgaaatatagaaaacatcttatacttgtgaacgga 616
           |||||||||||||| | |||||||||||||| ||| |||||||
Sbjct: 293 gtccatattgaaatgtcgaaaacatcttatatttgcgaacgga 251
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>gb|DQ175915.1| Hordeum vulgare subsp. vulgare clone 29-26A-LB flanking T-DNA
           insertion sequence
          Length = 664

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 574 gtccatattgaaatatagaaaacatcttatacttgtgaacgga 616
           |||||||||||||| | |||||||||||||| ||| |||||||
Sbjct: 331 gtccatattgaaatgtcgaaaacatcttatatttgcgaacgga 373
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 54.0 bits (27), Expect = 8e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 526   tatagacgcattttagtgtgtttgatcactcattt 560
             |||| ||||||||||||||||||| ||||||||||
Sbjct: 36299 tatatacgcattttagtgtgtttgttcactcattt 36265
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>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 185    ttccttcaacataatcatttattaaag 211
              |||||| ||||||||||||||||||||
Sbjct: 539316 ttcctttaacataatcatttattaaag 539290
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>gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183168

 Score = 46.1 bits (23), Expect = 0.20
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 703   tgataaaataatatgtgcaacaa 725
             |||||||||||||||||||||||
Sbjct: 45528 tgataaaataatatgtgcaacaa 45550
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>emb|AL133284.13| Human DNA sequence from clone RP11-67K19 on chromosome 9q33.1-34.11
             Contains part of the ASTN2 gene for astrotactin 2
             (KIAA0634), the TRIM32 gene for tripartite
             motif-containing 32, and a novel gene, complete sequence
          Length = 155466

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 235   agagaagagctgcagcagttca 256
             ||||||||||||||||||||||
Sbjct: 24838 agagaagagctgcagcagttca 24859
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>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 376   agaaaataaataaaattaatta 397
             ||||||||||||||||||||||
Sbjct: 78892 agaaaataaataaaattaatta 78871
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>gb|AC097524.2| Homo sapiens BAC clone RP11-604B8 from 4, complete sequence
          Length = 113613

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 372   aggaagaaaataaataaaattaattaccaa 401
             ||||||||||||||||| ||||| ||||||
Sbjct: 33092 aggaagaaaataaataacattaactaccaa 33121
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>emb|BX470176.11| Zebrafish DNA sequence from clone CH211-120C23 in linkage group 7,
             complete sequence
          Length = 176596

 Score = 44.1 bits (22), Expect = 0.79
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 654   attctgatggtaacaaaactat 675
             ||||||||||||||||||||||
Sbjct: 55685 attctgatggtaacaaaactat 55706
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>gb|AC016368.3| Drosophila melanogaster clone BACR36A03, complete sequence
          Length = 165876

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 76651 aagaaaataaataaaattaat 76631



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 68750 aagaaaataaataaaattaat 68730
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>gb|AC008257.6| Drosophila melanogaster clone BACR08A11, complete sequence
          Length = 170478

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 375    aagaaaataaataaaattaat 395
              |||||||||||||||||||||
Sbjct: 166906 aagaaaataaataaaattaat 166886
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>gb|AC092628.3| Homo sapiens BAC clone RP11-279O22 from 7, complete sequence
          Length = 144491

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 605   cttgtgaacggagggaataacaaataatatgtg 637
             |||||||| |||||||||| |||||||||||||
Sbjct: 54100 cttgtgaa-ggagggaatatcaaataatatgtg 54069
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>gb|AC185538.1| Drosophila melanogaster clone BACR04D19, complete sequence
          Length = 159597

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 29093 aagaaaataaataaaattaat 29073



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 21192 aagaaaataaataaaattaat 21172
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 370     caaggaagaaaataaataaaattaa 394
               ||||||| |||||||||||||||||
Sbjct: 2066030 caaggaaaaaaataaataaaattaa 2066054
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>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence
          Length = 119355

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 71  aacacaatttttgtatgaacgaaat 95
           |||||||||||||||||||| ||||
Sbjct: 305 aacacaatttttgtatgaactaaat 329
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>gb|AC128638.34| Medicago truncatula clone mth2-36h10, complete sequence
          Length = 110895

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   aaaataaataaaattaattac 398
             |||||||||||||||||||||
Sbjct: 72176 aaaataaataaaattaattac 72196
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>gb|AC087363.17| Homo sapiens chromosome 8, clone RP11-529P14, complete sequence
          Length = 174028

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 370   caaggaagaaaataaataaaa 390
             |||||||||||||||||||||
Sbjct: 82070 caaggaagaaaataaataaaa 82050
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>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1,
              complete sequence
          Length = 134205

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 370    caaggaagaaaataaataaaa 390
              |||||||||||||||||||||
Sbjct: 131709 caaggaagaaaataaataaaa 131689
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 669    aaactatatttaataaaggca 689
              |||||||||||||||||||||
Sbjct: 799978 aaactatatttaataaaggca 799998
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>gb|AC011029.7| Homo sapiens chromosome 8, clone RP11-202L1, complete sequence
          Length = 161123

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  aagaaaataaataaaattaat 395
            |||||||||||||||||||||
Sbjct: 1200 aagaaaataaataaaattaat 1180
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>gb|AF355270.1| Balaena mysticetus haplotype OOO mitochondrial control region,
           partial sequence
          Length = 453

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 378 aaaataaataaaattaattac 398
           |||||||||||||||||||||
Sbjct: 221 aaaataaataaaattaattac 201
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>gb|AF355268.1| Balaena mysticetus haplotype MMM mitochondrial control region,
           partial sequence
          Length = 453

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 378 aaaataaataaaattaattac 398
           |||||||||||||||||||||
Sbjct: 221 aaaataaataaaattaattac 201
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>gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gene sequence
          Length = 138754

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   aaggaagaaaataaataaaat 391
             |||||||||||||||||||||
Sbjct: 97708 aaggaagaaaataaataaaat 97688
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 371     aaggaagaaaataaataaaat 391
               |||||||||||||||||||||
Sbjct: 2045957 aaggaagaaaataaataaaat 2045977
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>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence
          Length = 133085

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 79071 aagaaaataaataaaattaat 79051
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>gb|AC107301.10| Homo sapiens 3 BAC RP11-544A22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188000

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 376    agaaaataaataaaattaatt 396
              |||||||||||||||||||||
Sbjct: 145902 agaaaataaataaaattaatt 145922
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>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I,
             complete sequence
          Length = 86801

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   aaggaagaaaataaataaaat 391
             |||||||||||||||||||||
Sbjct: 14115 aaggaagaaaataaataaaat 14095
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>gb|AC005698.1|AC005698 Genomic sequence for Arabidopsis thaliana BAC T3P18 from Chromosome 1,
             complete sequence
          Length = 97054

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   aaggaagaaaataaataaaat 391
             |||||||||||||||||||||
Sbjct: 92137 aaggaagaaaataaataaaat 92117
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>emb|X99111.1|ATBETAFRU A.thaliana gene coding for beta-fructosidase
          Length = 11937

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 371  aaggaagaaaataaataaaat 391
            |||||||||||||||||||||
Sbjct: 6798 aaggaagaaaataaataaaat 6778
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>emb|CR751567.7| Zebrafish DNA sequence from clone DKEY-47I3 in linkage group 20,
             complete sequence
          Length = 56010

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 27594 aagaaaataaataaaattaat 27574
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>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18,
              complete sequence
          Length = 164570

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 375    aagaaaataaataaaattaat 395
              |||||||||||||||||||||
Sbjct: 124478 aagaaaataaataaaattaat 124498
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>gb|AC011595.13| Homo sapiens 12 BAC RP11-114F10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 152358

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   caaggaagaaaataaataaaa 390
             |||||||||||||||||||||
Sbjct: 83581 caaggaagaaaataaataaaa 83601
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>gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 of 73 of the complete
             sequence
          Length = 415717

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 46319 aagaaaataaataaaattaat 46299



 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   aagaaaataaataaaattaat 395
             |||||||||||||||||||||
Sbjct: 38418 aagaaaataaataaaattaat 38398
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>emb|AL135841.11| Human DNA sequence from clone RP11-327L3 on chromosome 9p13.1-13.3
             Contains two novel genes, a phosphoglycerate mutase 1
             (brain) (PGAMA) (PGAM1) psueodgene, the OR2S2 gene for
             olfactory receptor family 2 subfamily S member 2 and a
             nuclease sensitive element binding protein 1 (YB1, BP-8,
             CSDB, DBPB, YB-1, YBX1, NSEP-1, MDR-NF1) (NSEP1)
             pseudogene, complete sequence
          Length = 99886

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   aaggaagaaaataaataaaat 391
             |||||||||||||||||||||
Sbjct: 14095 aaggaagaaaataaataaaat 14075
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>gb|DQ145045.1| Balaena mysticetus voucher BmysNEPSB1 control region, partial
           sequence; mitochondrial
          Length = 346

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 378 aaaataaataaaattaattac 398
           |||||||||||||||||||||
Sbjct: 220 aaaataaataaaattaattac 200
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>gb|AC172877.1| Brassica rapa subsp. pekinensis clone KBrH042F19, complete sequence
          Length = 108651

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   tcaacataatcatttattaaa 210
             |||||||||||||||||||||
Sbjct: 42587 tcaacataatcatttattaaa 42607
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>gb|L35617.1|CPQFRA Caperea marginata (individual isolate NZ01) DNA fragment
          Length = 416

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 378 aaaataaataaaattaattac 398
           |||||||||||||||||||||
Sbjct: 220 aaaataaataaaattaattac 200
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>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete
              sequence
          Length = 132773

 Score = 42.1 bits (21), Expect = 3.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 690    tgagaatatgctctgataaaa 710
              |||||||||||||||||||||
Sbjct: 113789 tgagaatatgctctgataaaa 113769


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,455,672
Number of Sequences: 3902068
Number of extensions: 13455672
Number of successful extensions: 309382
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 308970
Number of HSP's gapped (non-prelim): 411
length of query: 896
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 873
effective length of database: 17,143,297,704
effective search space: 14966098895592
effective search space used: 14966098895592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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