ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
2dbj|AK111714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
3dbj|AK111572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
4ref|XM_477065.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
6dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
7dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
11gb|AY835629.1| Homo sapiens superoxide dismutase 1, soluble (amy... 44 0.39
12emb|CR624343.1| full-length cDNA clone CS0DC018YI22 of Neuroblas... 44 0.39
13gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,... 44 0.39
14gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G... 44 0.39
15dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 44 0.39
16dbj|AP000253.2| Homo sapiens genomic DNA, chromosome 21 clone:CM... 44 0.39
17dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.39
18dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 44 0.39
19emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chr... 42 1.5
20gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone... 40 6.1
21gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosom... 40 6.1
22gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complet... 40 6.1
23gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, comp... 40 6.1
24gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Can... 40 6.1
25gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map... 40 6.1
26gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complet... 40 6.1
27gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cance... 40 6.1
28gb|BC042662.1| Mus musculus, Similar to zinc finger protein 60, ... 40 6.1
29gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 6.1
30emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chr... 40 6.1
31gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 6.1
32emb|CR847961.12| Zebrafish DNA sequence from clone DKEY-154B7 in... 40 6.1 
>dbj|AK072591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N22, full
           insert sequence
          Length = 2346

 Score =  176 bits (89), Expect = 4e-41
 Identities = 230/279 (82%), Gaps = 3/279 (1%)
 Strand = Plus / Minus

                                                                       
Query: 169 tggaagggttagctccggnttcacacgaggtgccgcanaaaccatgcttgtttcggattt 228
           |||||| || ||||| || ||||||||||||||| |  |||| ||||||||||| |||||
Sbjct: 991 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 932

                                                                       
Query: 229 ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 288
             |  || ||| ||| |  ||| ||| |||||| ||||||| ||||||   || ||||||
Sbjct: 931 attggttctccctgtggctcctgcaatcttatcttttttgaccttttt---aacagaacc 875

                                                                       
Query: 289 accctgctttccaccttctgaanattttttcttgntattatcttctgcntctgcatcctt 348
            ||||||||||||||||| ||| ||||| ||||  | |||||||| || |||||||||||
Sbjct: 874 tccctgctttccaccttccgaagattttctcttattgttatcttcggcatctgcatcctt 815

                                                                       
Query: 349 gctttctgcttcanctctatcanaatctgagagtgctttctccatacgctcctcaactga 408
           |||||||||||||  | ||||  | ||| | |||| ||||||||| ||||| ||||||||
Sbjct: 814 gctttctgcttcagttttatctgattctaaaagtgttttctccatgcgctcttcaactga 755

                                                  
Query: 409 atcttcaagcaacccccaatgcacttncttctgatttat 447
           |||||||||||||||||||||||| | |||| |||||||
Sbjct: 754 atcttcaagcaacccccaatgcacctccttcagatttat 716
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>dbj|AK111714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021I24, full
           insert sequence
          Length = 1996

 Score =  155 bits (78), Expect = 1e-34
 Identities = 205/248 (82%), Gaps = 6/248 (2%)
 Strand = Plus / Minus

                                                                       
Query: 207 aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
           |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 502 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 443

                                                                       
Query: 267 tgagctttttgttaagagaaccaccctgctttccaccttctgaanattttttcttgntat 326
           ||| |||||| |   | || |||||||||||||||||||||||  || ||||||||   |
Sbjct: 442 tgatctttttat---gtgagccaccctgctttccaccttctgaggatcttttcttg---t 389

                                                                       
Query: 327 tatcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctt 386
           | |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |
Sbjct: 388 tgtcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgcct 329

                                                                       
Query: 387 tctccatacgctcctcaactgaatcttcaagcaacccccaatgcacttncttctgattta 446
           |||||||||| || |||| |||||||||||| | |||||||||||| | |||||||||||
Sbjct: 328 tctccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgattta 269

                   
Query: 447 tctgnttt 454
           |||| |||
Sbjct: 268 tctgtttt 261
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>dbj|AK111572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E21, full
            insert sequence
          Length = 2638

 Score =  155 bits (78), Expect = 1e-34
 Identities = 205/248 (82%), Gaps = 6/248 (2%)
 Strand = Plus / Minus

                                                                        
Query: 207  aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
            |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 1529 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 1470

                                                                        
Query: 267  tgagctttttgttaagagaaccaccctgctttccaccttctgaanattttttcttgntat 326
            ||| |||||| |   | || |||||||||||||||||||||||  || ||||||||   |
Sbjct: 1469 tgatctttttat---gtgagccaccctgctttccaccttctgaggatcttttcttg---t 1416

                                                                        
Query: 327  tatcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctt 386
            | |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |
Sbjct: 1415 tgtcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgcct 1356

                                                                        
Query: 387  tctccatacgctcctcaactgaatcttcaagcaacccccaatgcacttncttctgattta 446
            |||||||||| || |||| |||||||||||| | |||||||||||| | |||||||||||
Sbjct: 1355 tctccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgattta 1296

                    
Query: 447  tctgnttt 454
            |||| |||
Sbjct: 1295 tctgtttt 1288
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>ref|XM_477065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1692

 Score =  109 bits (55), Expect = 8e-21
 Identities = 107/126 (84%)
 Strand = Plus / Minus

                                                                       
Query: 329 tcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctttc 388
           |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |||
Sbjct: 713 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 654

                                                                       
Query: 389 tccatacgctcctcaactgaatcttcaagcaacccccaatgcacttncttctgatttatc 448
           |||||||| || |||| |||||||||||| | |||||||||||| | |||||||||||||
Sbjct: 653 tccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgatttatc 594

                 
Query: 449 tgnttt 454
           || |||
Sbjct: 593 tgtttt 588



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 86/103 (83%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                       
Query: 207 aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
           |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 847 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 788

                                                      
Query: 267 tgagctttttgttaagagaaccaccctgctttccaccttctga 309
           ||| |||||| |   | || |||||||||||||||||||||||
Sbjct: 787 tgatctttttat---gtgagccaccctgctttccaccttctga 748
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 326      ttatcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgct 385
                |||||||| || ||||||||||||||||||||||||  | ||||  | ||| | |||| |
Sbjct: 26148975 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 26148916

                                                    
Query: 386      ttctccatacgctcctcaactgaatcttcaagcaac 421
                |||||||| ||||| |||||||||||||||||||||
Sbjct: 26148915 ttctccatgcgctcttcaactgaatcttcaagcaac 26148880



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 120/148 (81%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                            
Query: 169      tggaagggttagctccggnttcacacgaggtgccgcanaaaccatgcttgtttcggattt 228
                |||||| || ||||| || ||||||||||||||| |  |||| ||||||||||| |||||
Sbjct: 26149383 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 26149324

                                                                            
Query: 229      ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 288
                  |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 26149323 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 26149267

                                            
Query: 289      accctgctttccaccttctgaanatttt 316
                 ||||||||||||||||| ||| |||||
Sbjct: 26149266 tccctgctttccaccttccgaagatttt 26149239
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J02
          Length = 151636

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                          
Query: 326    ttatcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgct 385
              |||||||| || ||||||||||||||||||||||||  | ||||  | ||| | |||| |
Sbjct: 128220 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 128161

                                                  
Query: 386    ttctccatacgctcctcaactgaatcttcaagcaac 421
              |||||||| ||||| |||||||||||||||||||||
Sbjct: 128160 ttctccatgcgctcttcaactgaatcttcaagcaac 128125



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 120/148 (81%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                          
Query: 169    tggaagggttagctccggnttcacacgaggtgccgcanaaaccatgcttgtttcggattt 228
              |||||| || ||||| || ||||||||||||||| |  |||| ||||||||||| |||||
Sbjct: 128628 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 128569

                                                                          
Query: 229    ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 288
                |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 128568 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 128512

                                          
Query: 289    accctgctttccaccttctgaanatttt 316
               ||||||||||||||||| ||| |||||
Sbjct: 128511 tccctgctttccaccttccgaagatttt 128484
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>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0453H04
          Length = 175047

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 326   ttatcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgct 385
             |||||||| || ||||||||||||||||||||||||  | ||||  | ||| | |||| |
Sbjct: 13515 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 13456

                                                 
Query: 386   ttctccatacgctcctcaactgaatcttcaagcaac 421
             |||||||| ||||| |||||||||||||||||||||
Sbjct: 13455 ttctccatgcgctcttcaactgaatcttcaagcaac 13420



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 120/148 (81%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                         
Query: 169   tggaagggttagctccggnttcacacgaggtgccgcanaaaccatgcttgtttcggattt 228
             |||||| || ||||| || ||||||||||||||| |  |||| ||||||||||| |||||
Sbjct: 13923 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 13864

                                                                         
Query: 229   ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 288
               |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 13863 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 13807

                                         
Query: 289   accctgctttccaccttctgaanatttt 316
              ||||||||||||||||| ||| |||||
Sbjct: 13806 tccctgctttccaccttccgaagatttt 13779
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                           
Query: 329     tcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctttc 388
               |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |||
Sbjct: 5694490 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 5694431

                                            
Query: 389     tccatacgctcctcaactgaatcttcaag 417
               |||||||| || |||| ||||||||||||
Sbjct: 5694430 tccatacgttcttcaagtgaatcttcaag 5694402



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 86/103 (83%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                           
Query: 207     aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
               |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 5694991 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 5694932

                                                          
Query: 267     tgagctttttgttaagagaaccaccctgctttccaccttctga 309
               ||| |||||| |   | || |||||||||||||||||||||||
Sbjct: 5694931 tgatctttttat---gtgagccaccctgctttccaccttctga 5694892



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 421     cccccaatgcacttncttctgatttatctgnttt 454
               |||||||||||| | ||||||||||||||| |||
Sbjct: 5694208 cccccaatgcacctccttctgatttatctgtttt 5694175
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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1119_B04
          Length = 151721

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                        
Query: 329  tcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctttc 388
            |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |||
Sbjct: 1518 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 1459

                                         
Query: 389  tccatacgctcctcaactgaatcttcaag 417
            |||||||| || |||| ||||||||||||
Sbjct: 1458 tccatacgttcttcaagtgaatcttcaag 1430



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 86/103 (83%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                        
Query: 207  aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
            |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 2019 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 1960

                                                       
Query: 267  tgagctttttgttaagagaaccaccctgctttccaccttctga 309
            ||| |||||| |   | || |||||||||||||||||||||||
Sbjct: 1959 tgatctttttat---gtgagccaccctgctttccaccttctga 1920



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 421  cccccaatgcacttncttctgatttatctgnttt 454
            |||||||||||| | ||||||||||||||| |||
Sbjct: 1236 cccccaatgcacctccttctgatttatctgtttt 1203
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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0431A02
          Length = 165038

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                          
Query: 329    tcttctgcntctgcatccttgctttctgcttcanctctatcanaatctgagagtgctttc 388
              |||||||  ||||||||||||||||||  ||||  | ||||| ||||||| | ||| |||
Sbjct: 156182 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 156123

                                           
Query: 389    tccatacgctcctcaactgaatcttcaag 417
              |||||||| || |||| ||||||||||||
Sbjct: 156122 tccatacgttcttcaagtgaatcttcaag 156094



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 86/103 (83%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 207    aaaccatgcttgtttcggatttggtatttttccttgttggacctacaaacttatcctttt 266
              |||||||||| ||||| |||||  | ||||||| ||| |  ||||||||||| |||||||
Sbjct: 156683 aaaccatgctagtttcagatttcatgtttttccctgtggttcctacaaacttgtcctttt 156624

                                                         
Query: 267    tgagctttttgttaagagaaccaccctgctttccaccttctga 309
              ||| |||||| |   | || |||||||||||||||||||||||
Sbjct: 156623 tgatctttttat---gtgagccaccctgctttccaccttctga 156584



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 421    cccccaatgcacttncttctgatttatctgnttt 454
              |||||||||||| | ||||||||||||||| |||
Sbjct: 155900 cccccaatgcacctccttctgatttatctgtttt 155867
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>gb|AY835629.1| Homo sapiens superoxide dismutase 1, soluble (amyotrophic lateral
            sclerosis 1 (adult)) (SOD1) gene, complete cds
          Length = 12537

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 35   taggaatggtatttatatttttcaaaggct 64
            |||||||||| ||||||||||| |||||||
Sbjct: 2060 taggaatggtttttatatttttaaaaggct 2089
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>emb|CR624343.1| full-length cDNA clone CS0DC018YI22 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1632

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 35  taggaatggtatttatatttttcaaaggct 64
           |||||||||| ||||||||||| |||||||
Sbjct: 678 taggaatggtttttatatttttaaaaggct 707
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>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence
          Length = 136653

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 35     taggaatggtatttatatttttcaaaggct 64
              |||||||||| ||||||||||| |||||||
Sbjct: 124359 taggaatggtttttatatttttaaaaggct 124330
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>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence
          Length = 136653

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 35     taggaatggtatttatatttttcaaaggct 64
              |||||||||| ||||||||||| |||||||
Sbjct: 124359 taggaatggtttttatatttttaaaaggct 124330
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>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete
             sequence
          Length = 149298

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 35    taggaatggtatttatatttttcaaaggct 64
             |||||||||| ||||||||||| |||||||
Sbjct: 56350 taggaatggtttttatatttttaaaaggct 56379
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>dbj|AP000253.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S552, complete
             sequence
          Length = 22392

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 35    taggaatggtatttatatttttcaaaggct 64
             |||||||||| ||||||||||| |||||||
Sbjct: 18160 taggaatggtttttatatttttaaaaggct 18189
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>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 35     taggaatggtatttatatttttcaaaggct 64
              |||||||||| ||||||||||| |||||||
Sbjct: 303356 taggaatggtttttatatttttaaaaggct 303385
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>dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 11/12, complete sequence
          Length = 100000

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 35    taggaatggtatttatatttttcaaaggct 64
             |||||||||| ||||||||||| |||||||
Sbjct: 16344 taggaatggtttttatatttttaaaaggct 16373
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>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete
              sequence
          Length = 184736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 288    caccctgctttccaccttctg 308
              |||||||||||||||||||||
Sbjct: 148087 caccctgctttccaccttctg 148107
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>gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone MGC:83957
            IMAGE:6862393), complete cds
          Length = 3593

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 406  tgaatcttcaagcaaccccc 425
            ||||||||||||||||||||
Sbjct: 2690 tgaatcttcaagcaaccccc 2671
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>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete
             sequence
          Length = 182891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   cttatcctttttgagctttt 275
             ||||||||||||||||||||
Sbjct: 15520 cttatcctttttgagctttt 15501
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>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence
          Length = 245757

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   cttatcctttttgagctttt 275
             ||||||||||||||||||||
Sbjct: 54845 cttatcctttttgagctttt 54864
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>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence
          Length = 163816

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    ggtatttatatttttcaaag 61
             ||||||||||||||||||||
Sbjct: 33770 ggtatttatatttttcaaag 33751
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>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193809

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    cctttttgagctttttgtta 280
              ||||||||||||||||||||
Sbjct: 171399 cctttttgagctttttgtta 171418
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>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete
             sequence
          Length = 90283

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   tcaactgaatcttcaagcaa 420
             ||||||||||||||||||||
Sbjct: 70398 tcaactgaatcttcaagcaa 70417
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>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence
          Length = 151389

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    tggtatttatatttttcaaa 60
             ||||||||||||||||||||
Sbjct: 23428 tggtatttatatttttcaaa 23447
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>gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 159605

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    cctttttgagctttttgtta 280
              ||||||||||||||||||||
Sbjct: 155336 cctttttgagctttttgtta 155317
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>gb|BC042662.1| Mus musculus, Similar to zinc finger protein 60, clone IMAGE:2645174,
            mRNA
          Length = 4839

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   tggtatttatatttttcaaa 60
            ||||||||||||||||||||
Sbjct: 1541 tggtatttatatttttcaaa 1560
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    tggtatttatatttttcaaa 60
             ||||||||||||||||||||
Sbjct: 72024 tggtatttatatttttcaaa 72043
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>emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chromosome X, complete
              sequence
          Length = 164991

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tggtatttatatttttcaaa 60
              ||||||||||||||||||||
Sbjct: 101502 tggtatttatatttttcaaa 101483
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tggtatttatatttttcaaa 60
              ||||||||||||||||||||
Sbjct: 140091 tggtatttatatttttcaaa 140072
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>emb|CR847961.12| Zebrafish DNA sequence from clone DKEY-154B7 in linkage group 5, complete
              sequence
          Length = 237051

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      agatcacaacaacaacctca 24
              ||||||||||||||||||||
Sbjct: 112218 agatcacaacaacaacctca 112237


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,952,002
Number of Sequences: 3902068
Number of extensions: 3952002
Number of successful extensions: 67109
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66996
Number of HSP's gapped (non-prelim): 102
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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