Clone Name | rbasd13h07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EIN3_ARATH (O24606) ETHYLENE-INSENSITIVE3 protein | 32 | 1.7 | 2 | GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p2... | 30 | 8.3 |
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>EIN3_ARATH (O24606) ETHYLENE-INSENSITIVE3 protein| Length = 628 Score = 32.0 bits (71), Expect = 1.7 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%) Frame = -1 Query: 655 LPMDGQRSIAELMNMYDTAFPANKN---MGNDDVTIIE 551 +P DGQ+ I+ELM+MYD +N+ M N V++++ Sbjct: 470 VPEDGQKMISELMSMYDRNVQSNQTSMVMENQSVSLLQ 507
>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa| golgin) (Golgin-245) (Protein 72.1) Length = 2230 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -1 Query: 646 DGQRSIAELMNMYDTAFPANKNMGNDDVTIIERPNSLTPGTQM 518 D Q + EL Y +N GND+VTI+E L T + Sbjct: 2076 DLQTQLEELQKKYQQKLEQEENPGNDNVTIMELQTQLAQKTTL 2118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,814,565 Number of Sequences: 219361 Number of extensions: 1158970 Number of successful extensions: 3218 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3218 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)