ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precur... 40 0.001
2NLTP3_ARATH (Q9LLR7) Nonspecific lipid-transfer protein 3 precur... 31 0.69
3SCA_LILLO (Q9SW93) Stigma/stylar cysteine-rich adhesin precursor... 31 0.90
4NLTPA_BRAOT (Q42641) Nonspecific lipid-transfer protein A precur... 30 2.0
5NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 pre... 29 2.6
6NU4M_PARTE (P15581) NADH-ubiquinone oxidoreductase chain 4 (EC 1... 29 3.4
7NLTP5_ORYSA (O65091) Nonspecific lipid-transfer protein 5 precur... 28 4.5
8ARGJ_ZYMMO (Q5NP13) Arginine biosynthesis bifunctional protein a... 28 5.8
9NLTP_HELAN (Q39950) Nonspecific lipid-transfer protein precursor... 28 7.6
10NLTP4_ORYSA (Q42976) Nonspecific lipid-transfer protein 4 precur... 28 7.6
11NLTP_BETVU (Q43748) Nonspecific lipid-transfer protein precursor... 27 10.0
12DEOC2_MESFL (Q6F0H8) Deoxyribose-phosphate aldolase 2 (EC 4.1.2.... 27 10.0
13NLTP1_SORBI (Q43193) Nonspecific lipid-transfer protein 1 precur... 27 10.0
14NLTP_MAIZE (P19656) Nonspecific lipid-transfer protein precursor... 27 10.0
15TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyras... 27 10.0

>NLTP3_HORVU (Q43766) Nonspecific lipid-transfer protein 3 precursor (LTP 3)|
           (CW20) (CW-20) (CW-19)
          Length = 118

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           VSVPFPISMSTDCNKVH
Sbjct: 102 VSVPFPISMSTDCNKVH 118



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>NLTP3_ARATH (Q9LLR7) Nonspecific lipid-transfer protein 3 precursor (LTP 3)|
          Length = 115

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKV 264
           VS+P+PISMST+CN +
Sbjct: 99  VSIPYPISMSTNCNNI 114



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>SCA_LILLO (Q9SW93) Stigma/stylar cysteine-rich adhesin precursor (Lipid|
           transfer protein)
          Length = 113

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKV 264
           V++P+PI M TDCNKV
Sbjct: 97  VNIPYPIRMQTDCNKV 112



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>NLTPA_BRAOT (Q42641) Nonspecific lipid-transfer protein A precursor (LTP A)|
           (Wax-associated protein 9A)
          Length = 118

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKV 264
           VSVPFPIS +T+CN V
Sbjct: 102 VSVPFPISTNTNCNNV 117



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>NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP|
           Cw-18) (PKG2316)
          Length = 115

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           VSVP+ IS S DC+K+H
Sbjct: 99  VSVPYTISASVDCSKIH 115



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>NU4M_PARTE (P15581) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 474

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 270 QGPLAGIRYSFLRACMDALVWSLISTLMECSYVRY 166
           +G  + I Y FL   M AL+ +L+  L+EC Y RY
Sbjct: 320 KGDSSLIAYGFLFTIMHALMSTLMFFLVECIYSRY 354



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>NLTP5_ORYSA (O65091) Nonspecific lipid-transfer protein 5 precursor (LTP 5)|
          Length = 117

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           V++P+ IS STDC++VH
Sbjct: 101 VNIPYAISPSTDCSRVH 117



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>ARGJ_ZYMMO (Q5NP13) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 409

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 193 VDGVLIRTILSNKK*NKRVCLCLYLAHTLCVCAYIFTRHACTRP 62
           +DG+ +RT+ +  K  +R  L L+L     V A + T+ AC  P
Sbjct: 19  IDGITLRTVCAGYKNWQRNDLSLFLFQPNTVVAGLTTQSACPSP 62



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>NLTP_HELAN (Q39950) Nonspecific lipid-transfer protein precursor (LTP) (NsLTP)|
           (SDI-9)
          Length = 116

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKV 264
           VS+P+ IS STDC+KV
Sbjct: 100 VSIPYKISPSTDCSKV 115



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>NLTP4_ORYSA (Q42976) Nonspecific lipid-transfer protein 4 precursor (LTP 4)|
          Length = 121

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           VSV FPIS S DC+K++
Sbjct: 105 VSVAFPISTSVDCSKIN 121



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>NLTP_BETVU (Q43748) Nonspecific lipid-transfer protein precursor (LTP)|
          Length = 117

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           VSVP+ IS +T+CN +H
Sbjct: 101 VSVPYAISPNTNCNAIH 117



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>DEOC2_MESFL (Q6F0H8) Deoxyribose-phosphate aldolase 2 (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase 2) (Deoxyriboaldolase 2) (DERA
           2)
          Length = 212

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -1

Query: 211 VELNIYVDGVLIRTILSNKK*NKRVCLCLYLAHTLCVCAYI 89
           ++LN Y+D  L++   +  + NK V LC+ + +  C+C +I
Sbjct: 1   MKLNNYIDATLLKPDATLIEINKFVDLCI-IKNVRCICVHI 40



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>NLTP1_SORBI (Q43193) Nonspecific lipid-transfer protein 1 precursor (LTP 1)|
          Length = 118

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKV 264
           VSVP+ IS STDC++V
Sbjct: 102 VSVPYTISTSTDCSRV 117



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>NLTP_MAIZE (P19656) Nonspecific lipid-transfer protein precursor (LTP)|
           (Phospholipid transfer protein) (PLTP) (Allergen Zea m
           14)
          Length = 120

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -3

Query: 311 VSVPFPISMSTDCNKVH 261
           VS+P+ IS STDC++V+
Sbjct: 104 VSIPYTISTSTDCSRVN 120



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>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +2

Query: 86  KYICAHTQCVCKVQT*AYSFILFFIAQYRTYEHSINVDIKLHTSASMHARRKEYLIPASG 265
           K +C+     C+     +S  L F A Y        V+  LH  A +HA+ K  L+P   
Sbjct: 667 KQLCSSQNVNCRDLEGRHSTPLHFAAGYNRVSV---VEYLLHHGADVHAKDKGGLVPLHN 723

Query: 266 PC 271
            C
Sbjct: 724 AC 725


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,422,883
Number of Sequences: 219361
Number of extensions: 895410
Number of successful extensions: 1866
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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