Clone Name | rbasd13h06 |
---|---|
Clone Library Name | barley_pub |
>emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b Length = 755 Score = 309 bits (156), Expect = 3e-81 Identities = 156/156 (100%) Strand = Plus / Minus Query: 158 attgctcaatatcgtacgtatgagcactccatcaacgtagatattaagctccacacaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 attgctcaatatcgtacgtatgagcactccatcaacgtagatattaagctccacacaagc 505 Query: 218 gcgtccatgcatgcacgtaggaaggagtatctgatccctgctagtggaccttgttgcagt 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gcgtccatgcatgcacgtaggaaggagtatctgatccctgctagtggaccttgttgcagt 445 Query: 278 cggtggacatgctgatggggaagggcacgctgacgc 313 |||||||||||||||||||||||||||||||||||| Sbjct: 444 cggtggacatgctgatggggaagggcacgctgacgc 409 Score = 260 bits (131), Expect = 2e-66 Identities = 138/141 (97%) Strand = Plus / Minus Query: 1 acacatcacacatacacatcggntnaagtacggcaaggagatgactgttcagtcactcat 60 |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| Sbjct: 721 acacatcacacatacacatcggctaaagtacagcaaggagatgactgttcagtcactcat 662 Query: 61 acggacgcgtgcatgcatgccgcgtaaatatatatgcgcacacacacagtgtgtgtgcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 acggacgcgtgcatgcatgccgcgtaaatatatatgcgcacacacacagtgtgtgtgcaa 602 Query: 121 ggtacagacataggcatactc 141 ||||||||||||||||||||| Sbjct: 601 ggtacagacataggcatactc 581
>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA Length = 660 Score = 309 bits (156), Expect = 3e-81 Identities = 156/156 (100%) Strand = Plus / Minus Query: 158 attgctcaatatcgtacgtatgagcactccatcaacgtagatattaagctccacacaagc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 attgctcaatatcgtacgtatgagcactccatcaacgtagatattaagctccacacaagc 443 Query: 218 gcgtccatgcatgcacgtaggaaggagtatctgatccctgctagtggaccttgttgcagt 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gcgtccatgcatgcacgtaggaaggagtatctgatccctgctagtggaccttgttgcagt 383 Query: 278 cggtggacatgctgatggggaagggcacgctgacgc 313 |||||||||||||||||||||||||||||||||||| Sbjct: 382 cggtggacatgctgatggggaagggcacgctgacgc 347 Score = 260 bits (131), Expect = 2e-66 Identities = 138/141 (97%) Strand = Plus / Minus Query: 1 acacatcacacatacacatcggntnaagtacggcaaggagatgactgttcagtcactcat 60 |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| Sbjct: 659 acacatcacacatacacatcggctaaagtacagcaaggagatgactgttcagtcactcat 600 Query: 61 acggacgcgtgcatgcatgccgcgtaaatatatatgcgcacacacacagtgtgtgtgcaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 acggacgcgtgcatgcatgccgcgtaaatatatatgcgcacacacacagtgtgtgtgcaa 540 Query: 121 ggtacagacataggcatactc 141 ||||||||||||||||||||| Sbjct: 539 ggtacagacataggcatactc 519
>gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3) mRNA, complete cds Length = 555 Score = 161 bits (81), Expect = 2e-36 Identities = 126/140 (90%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 174 cgtatgagcactccatcaacgtagatattaagctccacacaagcgcgtccatgcatgcac 233 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 527 cgtatgagcactccatcaacgtagaaattaagctccacgcaagcgcgtccatgcatgcac 468 Query: 234 gtaggaaggagtatctgatccctgctagtggaccttgttgcagtcggtggacatgctgat 293 |||||||||| ||| | | ||||| ||| |||||||||| ||||||||||||||| Sbjct: 467 gtaggaaggattatatatt--gaactagttgacattgttgcagttggtggacatgctgat 410 Query: 294 ggggaagggcacgctgacgc 313 |||||||||||||||||||| Sbjct: 409 ggggaagggcacgctgacgc 390
>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer protein precursor, exons 1-2 Length = 1965 Score = 121 bits (61), Expect = 1e-24 Identities = 67/69 (97%) Strand = Plus / Minus Query: 174 cgtatgagcactccatcaacgtagatattaagctccacacaagcgcgtccatgcatgcac 233 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 1734 cgtatgagcactccatcaacatagacattaagctccacacaagcgcgtccatgcatgcac 1675 Query: 234 gtaggaagg 242 ||||||||| Sbjct: 1674 gtaggaagg 1666 Score = 99.6 bits (50), Expect = 5e-18 Identities = 93/107 (86%), Gaps = 4/107 (3%) Strand = Plus / Minus Query: 27 agtacggcaaggagatgactgttcagtcactcatacggacgcgtgcatgcatgccgcgta 86 ||||| ||||||| |||| ||||| |||| |||||||||| |||||| |||| ||| || Sbjct: 1900 agtacagcaaggaactgacagttcactcacgcatacggacgtgtgcatacatgtcgcata 1841 Query: 87 aatatatatgcgcacacacacagtgtgtgtgcaaggtacagacatag 133 |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1840 aatatatatg----cacacacagtgtgtgtgcaaggtacagacatag 1798 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 273 gcagtcggtggacatgctgatggggaagggcacgctgacgc 313 ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1197 gcagttggtggacatgctgatggggaagggcacactgacgc 1157
>emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.4 gene) Length = 771 Score = 113 bits (57), Expect = 3e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 174 cgtatgagcactccatcaacgtagatattaagctccacacaagcgcgtccatgcatgcac 233 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 526 cgtatgagcactccatcaacataggcattaagctccacacaagcgcgtccatgcatgcac 467 Query: 234 gtaggaagg 242 ||||||||| Sbjct: 466 gtaggaagg 458 Score = 99.6 bits (50), Expect = 5e-18 Identities = 93/107 (86%), Gaps = 4/107 (3%) Strand = Plus / Minus Query: 27 agtacggcaaggagatgactgttcagtcactcatacggacgcgtgcatgcatgccgcgta 86 ||||| ||||||| |||| ||||| |||| |||||||||| |||||| |||| ||| || Sbjct: 692 agtacagcaaggaactgacagttcactcacgcatacggacgtgtgcatacatgtcgcata 633 Query: 87 aatatatatgcgcacacacacagtgtgtgtgcaaggtacagacatag 133 |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 632 aatatatatg----cacacacagtgtgtgtgcaaggtacagacatag 590 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 273 gcagtcggtggacatgctgatggggaagggcacgctgacgc 313 ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 429 gcagttggtggacatgctgatggggaagggcacactgacgc 389
>emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific lipid transfer protein precursor (ltp9.4b gene) Length = 776 Score = 113 bits (57), Expect = 3e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 174 cgtatgagcactccatcaacgtagatattaagctccacacaagcgcgtccatgcatgcac 233 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 519 cgtatgagcactccatcaacgtagacattaagctccacacaagcgcgtccttgcatgcac 460 Query: 234 gtaggaagg 242 || |||||| Sbjct: 459 gtcggaagg 451 Score = 87.7 bits (44), Expect = 2e-14 Identities = 90/105 (85%), Gaps = 4/105 (3%) Strand = Plus / Minus Query: 27 agtacggcaaggagatgactgttcagtcactcatacggacgcgtgcatgcatgccgcgta 86 ||||| |||| ||| |||| ||||| |||| ||||||||||| ||||| |||| ||| || Sbjct: 697 agtacagcaaagagttgacagttcactcacgcatacggacgcatgcatacatgtcgcata 638 Query: 87 aatatatatgcgcacacacacagtgtgtgtgcaaggtacagacat 131 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 637 aatatatatg----cacacacagtgtgtgcgcaaggtacagacat 597 Score = 87.7 bits (44), Expect = 2e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 258 ctagtggaccttgttgcagtcggtggacatgctgatggggaagggcacgctgacgc 313 ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 437 ctagttgacattgttgcagttggtggacatgctgatggggaagggcacgctgacgc 382
>emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non specific lipid transfer protein precursor, exons 1-2 Length = 2000 Score = 113 bits (57), Expect = 3e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 174 cgtatgagcactccatcaacgtagatattaagctccacacaagcgcgtccatgcatgcac 233 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 1899 cgtatgagcactccatcaacgtagacattaagctccacacaagcgcgtccttgcatgcac 1840 Query: 234 gtaggaagg 242 || |||||| Sbjct: 1839 gtcggaagg 1831 Score = 85.7 bits (43), Expect = 8e-14 Identities = 46/47 (97%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaagggcacgctgacgc 313 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1364 cttgttgcagttggtggacatgctgatggggaagggcacgctgacgc 1318 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 agtgtgtgtgcaaggtacagacat 131 |||||||| ||||||||||||||| Sbjct: 2000 agtgtgtgcgcaaggtacagacat 1977
>gb|AF439446.1|AF439446 Setaria italica lipid transfer protein mRNA, complete cds Length = 851 Score = 69.9 bits (35), Expect = 5e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaagggcacg 306 ||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 426 gaccttgttgcagtcggtggacatgctgatgcggaatggcacg 384
>emb|AJ704771.1| Oryza sativa (japonica cultivar-group) mRNA for lipid transfer protein (ltp2 gene) Length = 417 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||||||||||||||||| | ||||||||||||| Sbjct: 381 gaccttgttgcagtcggtggagaggctgatggggaag 345
>dbj|AK064888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K13, full insert sequence Length = 737 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||||||||||||||||| | ||||||||||||| Sbjct: 481 gaccttgttgcagtcggtggagaggctgatggggaag 445
>dbj|AK061740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E11, full insert sequence Length = 1437 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||||||||||||||||| | ||||||||||||| Sbjct: 1163 gaccttgttgcagtcggtggagaggctgatggggaag 1127
>emb|AL589678.9| Human DNA sequence from clone RP11-74C3 on chromosome 9 Contains the 3' end of a novel gene, complete sequence Length = 134922 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacacagtgtgtgtg 117 |||||||| ||||||||||||||||||||| Sbjct: 36177 atatatatacgcacacacacagtgtgtgtg 36148
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 702 cttgttgcagtcggtggagaggctgatggggaag 669
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 760383 cttgttgcagtcggtggagaggctgatggggaag 760350
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 722411 cttgttgcagtcggtggagaggctgatggggaag 722378
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 722411 cttgttgcagtcggtggagaggctgatggggaag 722378
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 760383 cttgttgcagtcggtggagaggctgatggggaag 760350
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 18751 cttgttgcagtcggtggagaggctgatggggaag 18784
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 267 cttgttgcagtcggtggacatgctgatggggaag 300 |||||||||||||||||| | ||||||||||||| Sbjct: 20561 cttgttgcagtcggtggagaggctgatggggaag 20594
>dbj|AK060108.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C09, full insert sequence Length = 1196 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 268 ttgttgcagtcggtggacatgctgatggggaag 300 ||||||||||||||||| | ||||||||||||| Sbjct: 429 ttgttgcagtcggtggagaggctgatggggaag 397
>emb|BX005308.13| Zebrafish DNA sequence from clone CH211-129F5, complete sequence Length = 168462 Score = 46.1 bits (23), Expect = 0.067 Identities = 23/23 (100%) Strand = Plus / Plus Query: 85 taaatatatatgcgcacacacac 107 ||||||||||||||||||||||| Sbjct: 127490 taaatatatatgcgcacacacac 127512
>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232039 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gcgcacacacacagtgtgtgtg 117 |||||||||||||||||||||| Sbjct: 212873 gcgcacacacacagtgtgtgtg 212894
>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence Length = 187465 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 gcgcacacacacagtgtgtgtg 117 |||||||||||||||||||||| Sbjct: 38088 gcgcacacacacagtgtgtgtg 38109
>emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chromosome 4, complete sequence Length = 185441 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgcaa 120 |||||||||||||||||||||| Sbjct: 29656 cacacacacagtgtgtgtgcaa 29635
>gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, complete sequence Length = 197112 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 106673 atatatatgcgcacacacaca 106653
>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence Length = 184813 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 126316 atatatatgcgcacacacaca 126296
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 92087 atatatatgcgcacacacaca 92107
>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete sequence Length = 191036 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 23652 cacacacacagtgtgtgtgca 23632
>gb|AY446761.1| Morone saxatilis isolate CH2 microsatellite AC25-6#12 sequence Length = 126 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446760.1| Morone saxatilis isolate RP3 microsatellite AC25-6#12 sequence Length = 126 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446759.1| Morone saxatilis isolate E2 microsatellite AC25-6#12 sequence Length = 114 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446758.1| Morone saxatilis isolate ML1 microsatellite AC25-6#12 sequence Length = 113 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446755.1| Morone saxatilis isolate CW5 microsatellite AC25-6#12 sequence Length = 114 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446754.1| Morone saxatilis isolate CW19 microsatellite AC25-6#12 sequence Length = 114 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446753.1| Morone saxatilis isolate T3 microsatellite AC25-6#12 sequence Length = 113 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446752.1| Morone saxatilis isolate TB16 microsatellite AC25-6#12 sequence Length = 114 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446751.1| Morone saxatilis isolate IH1 microsatellite AC25-6#12 sequence Length = 113 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AY446749.1| Morone saxatilis isolate MOT16 microsatellite AC25-6#12 sequence Length = 114 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgca 5
>gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, complete sequence Length = 176643 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 151647 atatatatgcgcacacacaca 151627
>gb|AC134449.3| Mus musculus BAC clone RP24-213M16 from chromosome 3, complete sequence Length = 174678 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 cgcacacacacagtgtgtgtg 117 ||||||||||||||||||||| Sbjct: 155752 cgcacacacacagtgtgtgtg 155772
>emb|AL731856.14| Human DNA sequence from clone RP11-647P3 on chromosome 9, complete sequence Length = 51132 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 6322 atatatatgcgcacacacaca 6302
>emb|AL513187.6| Human DNA sequence from clone RP11-436H6 on chromosome 1 Contains part of the NTNG1 gene for netrin G1, complete sequence Length = 122032 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 6646 atatatatgcgcacacacaca 6666
>emb|X71669.1|SVTLP1R S.vulgare ltp1 mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gcagtcggtggacatgctgatggggaagggcacgctgacgc 313 |||||||||||| ||||||||| | |||| |||||||||| Sbjct: 292 gcagtcggtggaggtgctgatggtgtaggggacgctgacgc 252
>emb|X71667.1|SVLTP1 S.vulgare ltp1 gene Length = 1499 Score = 42.1 bits (21), Expect = 1.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 273 gcagtcggtggacatgctgatggggaagggcacgctgacgc 313 |||||||||||| ||||||||| | |||| |||||||||| Sbjct: 995 gcagtcggtggaggtgctgatggtgtaggggacgctgacgc 955
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtgc 118 ||||||||||||||||||||| Sbjct: 20111 gcacacacacagtgtgtgtgc 20091 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gcgcacacacacagtgtgtgtgca 119 |||||||||||| ||||||||||| Sbjct: 20089 gcgcacacacactgtgtgtgtgca 20112
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtgc 118 ||||||||||||||||||||| Sbjct: 96405 gcacacacacagtgtgtgtgc 96385 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gcgcacacacacagtgtgtgtgca 119 |||||||||||| ||||||||||| Sbjct: 96383 gcgcacacacactgtgtgtgtgca 96406
>gb|AC021183.6| Homo sapiens BAC clone RP11-737D22 from 4, complete sequence Length = 118837 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 57769 atatatatgcgcacacacaca 57749
>gb|AC158535.2| Mus musculus BAC clone RP23-28J6 from chromosome 13, complete sequence Length = 216469 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 70042 atatatatgcgcacacacaca 70062
>gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174662 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 28086 atatatatgcgcacacacaca 28066
>emb|BX004772.17| Zebrafish DNA sequence from clone DKEY-15L1 in linkage group 7, complete sequence Length = 210545 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 73288 atatatatgcgcacacacaca 73268
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtgc 118 ||||||||||||||||||||| Sbjct: 20585777 gcacacacacagtgtgtgtgc 20585757 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gcgcacacacacagtgtgtgtgca 119 |||||||||||| ||||||||||| Sbjct: 20585755 gcgcacacacactgtgtgtgtgca 20585778
>gb|AC009506.5| Homo sapiens BAC clone RP11-542H1 from 2, complete sequence Length = 191764 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgcacacacacagtgtgtgtg 117 ||||||||||||||||||||| Sbjct: 55045 cgcacacacacagtgtgtgtg 55025
>gb|AC073416.8| Homo sapiens BAC clone RP11-136K15 from 2, complete sequence Length = 133529 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 39541 atatatatgcgcacacacaca 39521
>gb|AC153975.4| Mus musculus 10 BAC RP24-186L12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 145072 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 138323 atatatatgcgcacacacaca 138303
>dbj|AK073363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A16, full insert sequence Length = 760 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 439 gaccttgctgcagtcagtggagaggctgatggggaag 403
>dbj|AK070192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041I08, full insert sequence Length = 2914 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 2526 gaccttgctgcagtcagtggagaggctgatggggaag 2490
>dbj|AK062690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-A02, full insert sequence Length = 646 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 433 gaccttgctgcagtcagtggagaggctgatggggaag 397
>dbj|AK061182.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D09, full insert sequence Length = 928 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 438 gaccttgctgcagtcagtggagaggctgatggggaag 402
>dbj|AK059737.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D08, full insert sequence Length = 853 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 433 gaccttgctgcagtcagtggagaggctgatggggaag 397
>dbj|AK059714.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F09, full insert sequence Length = 773 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 264 gaccttgttgcagtcggtggacatgctgatggggaag 300 ||||||| ||||||| ||||| | ||||||||||||| Sbjct: 438 gaccttgctgcagtcagtggagaggctgatggggaag 402
>emb|AL929216.6| Zebrafish DNA sequence from clone CH211-138G9 in linkage group 20, complete sequence Length = 174383 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 58572 atatatatgcgcacacacaca 58592
>dbj|AB215142.1| Equus caballus DNA, microsatellite TKY1199 Length = 191 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cacacacacagtgtgtgtgca 119 ||||||||||||||||||||| Sbjct: 91 cacacacacagtgtgtgtgca 111
>gb|AC109446.2| Homo sapiens chromosome 16 clone CTD-2576D5, complete sequence Length = 193519 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 51674 atatatatgcgcacacacaca 51654
>emb|AL844531.6| Mouse DNA sequence from clone RP23-211J18 on chromosome 2, complete sequence Length = 181194 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacaca 108 ||||||||||||||||||||| Sbjct: 11122 atatatatgcgcacacacaca 11142
>emb|AL606906.18| Mouse DNA sequence from clone RP23-121J14 on chromosome 4, complete sequence Length = 198772 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 cgcacacacacagtgtgtgtg 117 ||||||||||||||||||||| Sbjct: 99681 cgcacacacacagtgtgtgtg 99661
>gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, complete sequence Length = 168471 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 98893 acacatcacacatacacatc 98874
>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence Length = 177860 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 105924 acacatcacacatacacatc 105943
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 157887 acacatcacacatacacatc 157906
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence Length = 226673 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 taaatatatatgcgcacacacaca 108 ||||||||||| |||||||||||| Sbjct: 160326 taaatatatatacgcacacacaca 160303
>gb|AC161108.2| Mus musculus chromosome 1, clone RP23-224G12, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 102490 acacatcacacatacacatc 102509
>gb|AC113039.10| Mus musculus chromosome 1, clone RP23-229P20, complete sequence Length = 172732 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 95955 acacatcacacatacacatc 95936
>gb|AY446745.1| Morone saxatilis isolate MOT6 microsatellite AC25-6#12 sequence Length = 117 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgc 118 |||||||||||||||||||| Sbjct: 25 cacacacacagtgtgtgtgc 6
>gb|AC099308.2| Drosophila melanogaster clone BACR11M14, complete sequence Length = 173097 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 taaatatatatgcgcacaca 104 |||||||||||||||||||| Sbjct: 169099 taaatatatatgcgcacaca 169118
>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete sequence Length = 191785 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacac 107 |||||||||||||||||||| Sbjct: 82968 atatatatgcgcacacacac 82987
>gb|AC159197.3| Mus musculus BAC clone RP23-421P10 from chromosome 12, complete sequence Length = 188400 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 168921 acacatcacacatacacatc 168902
>gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosome 5, complete sequence Length = 193291 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 133684 gcacacacacagtgtgtgtg 133703
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 84118 acacatcacacatacacatc 84099
>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete sequence Length = 217752 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 147971 acacatcacacatacacatc 147952
>gb|AC132144.3| Mus musculus BAC clone RP23-39L19 from chromosome 2, complete sequence Length = 233042 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgc 118 |||||||||||||||||||| Sbjct: 18546 cacacacacagtgtgtgtgc 18527
>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188451 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 140301 acacatcacacatacacatc 140320
>gb|AC123858.4| Mus musculus BAC clone RP23-345K19 from chromosome 15, complete sequence Length = 203182 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 112534 gcacacacacagtgtgtgtg 112515
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 207474 gcacacacacagtgtgtgtg 207455
>gb|AC121872.2| Mus musculus BAC clone RP24-122E10 from 12, complete sequence Length = 199519 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 76908 gcacacacacagtgtgtgtg 76927
>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence Length = 170587 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 106287 acacatcacacatacacatc 106268
>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research Institute) complete sequence Length = 218874 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 85413 gcacacacacagtgtgtgtg 85432
>emb|AL607152.21| Mouse DNA sequence from clone RP23-198N14 on chromosome 11, complete sequence Length = 232408 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cacacacacagtgtgtgtgc 118 |||||||||||||||||||| Sbjct: 151098 cacacacacagtgtgtgtgc 151079
>gb|AC165283.2| Mus musculus BAC clone RP24-348M18 from chromosome 12, complete sequence Length = 171825 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 4003 acacatcacacatacacatc 3984
>emb|AL138664.1|ATT5C2 Arabidopsis thaliana DNA chromosome 3, BAC clone T5C2 Length = 103098 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 catcaacgtagatattaagc 206 |||||||||||||||||||| Sbjct: 100941 catcaacgtagatattaagc 100922
>emb|BX248494.25| Zebrafish DNA sequence from clone XXyac-67H7_L, complete sequence Length = 125031 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 103772 tatatatgcgcacacacaca 103791
>tpg|BK003233.1| TPA: TPA_inf: Drosophila melanogaster HDC19895 (HDC19895) gene, complete cds Length = 522 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 taaatatatatgcgcacaca 104 |||||||||||||||||||| Sbjct: 164 taaatatatatgcgcacaca 145
>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence Length = 184338 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 gtcggtggacatgctgatgg 295 |||||||||||||||||||| Sbjct: 49102 gtcggtggacatgctgatgg 49083
>gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromosome 5, complete sequence Length = 147307 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacac 107 |||||||||||||||||||| Sbjct: 7030 atatatatgcgcacacacac 7049
>gb|AY235056.1| Meleagris gallopavo clone MNT-043 microsatellite sequence Length = 826 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 199 gcacacacacagtgtgtgtg 180
>gb|AC011706.14|AC011706 Drosophila melanogaster, chromosome X, region 19E-19E, BAC clone BACR03J18, complete sequence Length = 161614 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 taaatatatatgcgcacaca 104 |||||||||||||||||||| Sbjct: 139231 taaatatatatgcgcacaca 139212
>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR07I18, complete sequence Length = 159413 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 137818 tatatatgcgcacacacaca 137799
>gb|AC008142.2|AC008142 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR48D03, complete sequence Length = 175917 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 23542 tatatatgcgcacacacaca 23523
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 116795 tatatatgcgcacacacaca 116776
>gb|DQ020487.1| Sus scrofa clone BAC KNP_375G9, complete sequence Length = 142071 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 77614 gcacacacacagtgtgtgtg 77633
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 88 atatatatgcgcacacacacagtgtgtg 115 ||||| |||| ||||||||||||||||| Sbjct: 65437 atatacatgcacacacacacagtgtgtg 65410
>emb|BX649232.1| Mouse DNA sequence from clone RP23-271J11 on chromosome 2, complete sequence Length = 71295 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gtgtgtgtgcaaggtacaga 128 |||||||||||||||||||| Sbjct: 34547 gtgtgtgtgcaaggtacaga 34566
>emb|AL138644.1|ATT18D12 Arabidopsis thaliana DNA chromosome 3, BAC clone T18D12 Length = 100678 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 catcaacgtagatattaagc 206 |||||||||||||||||||| Sbjct: 6188 catcaacgtagatattaagc 6169
>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173752 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agatgactgttcagtcactc 58 |||||||||||||||||||| Sbjct: 171875 agatgactgttcagtcactc 171856
>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete sequence Length = 242618 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 119156 tatatatgcgcacacacaca 119137
>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete sequence Length = 300051 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 taaatatatatgcgcacaca 104 |||||||||||||||||||| Sbjct: 243596 taaatatatatgcgcacaca 243577
>emb|AL928940.12| Mouse DNA sequence from clone RP23-94J17 on chromosome 2, complete sequence Length = 115994 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 atatatgcgcacacacacag 109 |||||||||||||||||||| Sbjct: 46518 atatatgcgcacacacacag 46537
>emb|AL732620.14| Mouse DNA sequence from clone RP23-167G19 on chromosome 2, complete sequence Length = 230116 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 49951 gcacacacacagtgtgtgtg 49970
>gb|AC155638.3| Mus musculus 10 BAC RP24-223J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 160577 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 agatgactgttcagtcactc 58 |||||||||||||||||||| Sbjct: 20301 agatgactgttcagtcactc 20282
>gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, complete sequence Length = 185977 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acacatcacacatacacatc 20 |||||||||||||||||||| Sbjct: 99912 acacatcacacatacacatc 99893
>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence Length = 184939 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 129550 gcacacacacagtgtgtgtg 129569
>emb|AL844570.9| Zebrafish DNA sequence from clone DKEY-20D18, complete sequence Length = 240816 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tgcgcacacacacagtgtgtgtgc 118 ||||||||||||||| |||||||| Sbjct: 232362 tgcgcacacacacagagtgtgtgc 232339
>gb|U06690.1|RNU06690 Rattus norvegicus LEW/N clone D4N551 satellite DNA sequence Length = 400 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcacacacacagtgtgtgtg 117 |||||||||||||||||||| Sbjct: 101 gcacacacacagtgtgtgtg 82
>emb|AL928810.7| Mouse DNA sequence from clone RP23-71I16 on chromosome 2, complete sequence Length = 87843 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cacacacacagtgtgtgtgc 118 |||||||||||||||||||| Sbjct: 49495 cacacacacagtgtgtgtgc 49514
>emb|Z33621.1|BTSVSP109 B.taurus SVSP109 gene Length = 6956 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatatatgcgcacacacaca 108 |||||||||||||||||||| Sbjct: 3410 tatatatgcgcacacacaca 3391
>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete sequences Length = 174074 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 atatatatgcgcacacacacagtg 111 |||||||||| ||||||||||||| Sbjct: 151607 atatatatgcacacacacacagtg 151630 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,254,671 Number of Sequences: 3902068 Number of extensions: 3254671 Number of successful extensions: 58698 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58307 Number of HSP's gapped (non-prelim): 388 length of query: 313 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 291 effective length of database: 17,147,199,772 effective search space: 4989835133652 effective search space used: 4989835133652 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)