ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
2dbj|AK111572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
3dbj|AK111714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 5e-69
4ref|XM_477065.1| Oryza sativa (japonica cultivar-group), mRNA 208 2e-50
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
6dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
7dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
9dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
10dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
11gb|AY835629.1| Homo sapiens superoxide dismutase 1, soluble (amy... 44 0.55
12emb|CR624343.1| full-length cDNA clone CS0DC018YI22 of Neuroblas... 44 0.55
13gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown,... 44 0.55
14gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G... 44 0.55
15dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 44 0.55
16dbj|AP000253.2| Homo sapiens genomic DNA, chromosome 21 clone:CM... 44 0.55
17dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 44 0.55
18dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 44 0.55
19gb|DQ386648.1| Astatotilapia burtoni clone BAC 26M7 platelet-der... 42 2.2
20gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosom... 42 2.2
21emb|AL160236.4|CNS01RH0 Human chromosome 14 DNA sequence BAC R-1... 42 2.2
22emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chr... 42 2.2
23gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.6
24gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone... 40 8.6
25gb|AE013106.1| Thermoanaerobacter tengcongensis MB4, section 133... 40 8.6
26gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, comp... 40 8.6
27ref|XM_711645.1| Candida albicans SC5314 mitochondrial DNA polym... 40 8.6
28ref|XM_711586.1| Candida albicans SC5314 hypothetical protein (C... 40 8.6
29gb|AC125325.4| Mus musculus BAC clone RP23-296K22 from chromosom... 40 8.6
30gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome... 40 8.6
31gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosom... 40 8.6
32gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complet... 40 8.6
33ref|XM_947223.1| Theileria annulata strain Ankara hypothetical p... 40 8.6
34gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 o... 40 8.6
35gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, comp... 40 8.6
36gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, comple... 40 8.6
37emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 8.6
38gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Can... 40 8.6
39gb|AC092278.3| Homo sapiens chromosome 5 clone CTD-2012B7, compl... 40 8.6
40gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map... 40 8.6
41gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, compl... 40 8.6
42gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complet... 40 8.6
43gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 8.6
44gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cance... 40 8.6
45gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complet... 40 8.6
46gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosom... 40 8.6
47gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N... 40 8.6
48gb|BC042662.1| Mus musculus, Similar to zinc finger protein 60, ... 40 8.6
49gb|AC175497.2| Pan troglodytes BAC clone CH251-951E13 from chrom... 40 8.6
50gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 8.6
51gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 8.6
52gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, co... 40 8.6
53gb|AC104770.10| Homo sapiens chromosome 17, clone RP11-960B9, co... 40 8.6
54dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 8.6
55gb|AC010516.4|AC010516 Homo sapiens chromosome 19 clone LLNLR-25... 40 8.6
56dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 8.6
57emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chr... 40 8.6
58gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 8.6
59emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 40 8.6
60emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on ch... 40 8.6
61emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encepha... 40 8.6
62emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-4... 40 8.6
63emb|AJ506902.1|BOC506902 Buthus occitanus mardochei partial mito... 40 8.6
64emb|AJ506901.1|BOC506901 Buthus occitanus mardochei partial mito... 40 8.6
65emb|AJ506897.1|BOC506897 Buthus occitanus mardochei partial mito... 40 8.6
66emb|AJ506896.1|BOC506896 Buthus occitanus mardochei partial mito... 40 8.6 
>dbj|AK072591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N22, full
           insert sequence
          Length = 2346

 Score =  307 bits (155), Expect = 2e-80
 Identities = 359/425 (84%), Gaps = 4/425 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
           |||||| || ||||| |||||||||||||||||| | ||||| ||||||||||| |||||
Sbjct: 991 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 932

                                                                       
Query: 269 ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
             |  || ||| ||| |  ||| ||| |||||| ||||||| ||||||   || ||||||
Sbjct: 931 attggttctccctgtggctcctgcaatcttatcttttttgaccttttt---aacagaacc 875

                                                                       
Query: 329 accctgctttccaccttctgaagattttttcttgttattatcttctgcgtctgcatcctt 388
            ||||||||||||||||| ||||||||| |||| || |||||||| || |||||||||||
Sbjct: 874 tccctgctttccaccttccgaagattttctcttattgttatcttcggcatctgcatcctt 815

                                                                       
Query: 389 gctttctgcttcagctctatcagaatctgagagtgctttctccatacgctcctcaactga 448
           |||||||||||||| | |||| || ||| | |||| ||||||||| ||||| ||||||||
Sbjct: 814 gctttctgcttcagttttatctgattctaaaagtgttttctccatgcgctcttcaactga 755

                                                                       
Query: 449 atcttcaagcaacccccaatgcacttccttctgatttatctgttttgcctagtccttact 508
           |||||||||||||||||||||||| |||||| ||||||| ||||||||| | |||||  |
Sbjct: 754 atcttcaagcaacccccaatgcacctccttcagatttatttgttttgccaaatccttctt 695

                                                                       
Query: 509 agttccaaccagagcaacaacatcggcatcatcagagatcaatgaaggctgcccagcaga 568
            |||||||| |||||||||||||| |  ||||||||||| || || ||||| ||||  ||
Sbjct: 694 tgttccaactagagcaacaacatccgtgtcatcagagattaaagatggctgaccagggga 635

                                                                       
Query: 569 tacttcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttct 628
           ||| |||||| |||| | |||||| ||||||||||| | |||||||| ||||||||||||
Sbjct: 634 tacgtcaaaagttgtgcgttcatttattattccaagaaccacaagag-cttgtgttttct 576

                
Query: 629 ggaga 633
           |||||
Sbjct: 575 ggaga 571
to top
>dbj|AK111572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E21, full
            insert sequence
          Length = 2638

 Score =  272 bits (137), Expect = 1e-69
 Identities = 355/425 (83%), Gaps = 7/425 (1%)
 Strand = Plus / Minus

                                                                        
Query: 209  tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
            |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 1567 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 1508

                                                                        
Query: 269  ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
              | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 1507 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 1451

                                                                        
Query: 329  accctgctttccaccttctgaagattttttcttgttattatcttctgcgtctgcatcctt 388
            ||||||||||||||||||||| ||| |||||||||| |   |||||| ||||||||||||
Sbjct: 1450 accctgctttccaccttctgaggatcttttcttgttgt---cttctgtgtctgcatcctt 1394

                                                                        
Query: 389  gctttctgcttcagctctatcagaatctgagagtgctttctccatacgctcctcaactga 448
            |||||||  ||||| | ||||||||||||| | ||| ||||||||||| || |||| |||
Sbjct: 1393 gctttctatttcagttttatcagaatctgaaattgccttctccatacgttcttcaagtga 1334

                                                                        
Query: 449  atcttcaagcaacccccaatgcacttccttctgatttatctgttttgcctagtccttact 508
            ||||||||| | |||||||||||| |||||||||||||||||||||| | ||||||| ||
Sbjct: 1333 atcttcaagtatcccccaatgcacctccttctgatttatctgttttgtcaagtccttgct 1274

                                                                        
Query: 509  agttccaaccagagcaacaacatcggcatcatcagagatcaatgaaggctgcccagcaga 568
            |||||||| |||| ||||| |||| |  ||||||  ||| |||| || ||||||||  ||
Sbjct: 1273 agttccaatcagaacaacagcatccgagtcatcaatgattaatggagactgcccagggga 1214

                                                                        
Query: 569  tacttcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttct 628
            ||||| ||||  | | | |||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 1213 tacttgaaaatctatgcgttcattgattattccaagcaccacaagag-cttgtgttttgt 1155

                 
Query: 629  ggaga 633
            |||||
Sbjct: 1154 ggaga 1150
to top
>dbj|AK111714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021I24, full
           insert sequence
          Length = 1996

 Score =  270 bits (136), Expect = 5e-69
 Identities = 354/424 (83%), Gaps = 7/424 (1%)
 Strand = Plus / Minus

                                                                       
Query: 209 tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
           |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 540 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 481

                                                                       
Query: 269 ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
             | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 480 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 424

                                                                       
Query: 329 accctgctttccaccttctgaagattttttcttgttattatcttctgcgtctgcatcctt 388
           ||||||||||||||||||||| ||| |||||||||| |   |||||| ||||||||||||
Sbjct: 423 accctgctttccaccttctgaggatcttttcttgttgt---cttctgtgtctgcatcctt 367

                                                                       
Query: 389 gctttctgcttcagctctatcagaatctgagagtgctttctccatacgctcctcaactga 448
           |||||||  ||||| | ||||||||||||| | ||| ||||||||||| || |||| |||
Sbjct: 366 gctttctatttcagttttatcagaatctgaaattgccttctccatacgttcttcaagtga 307

                                                                       
Query: 449 atcttcaagcaacccccaatgcacttccttctgatttatctgttttgcctagtccttact 508
           ||||||||| | |||||||||||| |||||||||||||||||||||| | ||||||| ||
Sbjct: 306 atcttcaagtatcccccaatgcacctccttctgatttatctgttttgtcaagtccttgct 247

                                                                       
Query: 509 agttccaaccagagcaacaacatcggcatcatcagagatcaatgaaggctgcccagcaga 568
           |||||||| |||| ||||| |||| |  ||||||  ||| |||| || ||||||||  ||
Sbjct: 246 agttccaatcagaacaacagcatccgagtcatcaatgattaatggagactgcccagggga 187

                                                                       
Query: 569 tacttcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttct 628
           ||||| ||||  | | | |||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 186 tacttgaaaatctatgcgttcattgattattccaagcaccacaagag-cttgtgttttgt 128

               
Query: 629 ggag 632
           ||||
Sbjct: 127 ggag 124
to top
>ref|XM_477065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1692

 Score =  208 bits (105), Expect = 2e-50
 Identities = 226/265 (85%), Gaps = 1/265 (0%)
 Strand = Plus / Minus

                                                                       
Query: 369 tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 428
           ||||||| |||||||||||||||||||  ||||| | ||||||||||||| | ||| |||
Sbjct: 713 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 654

                                                                       
Query: 429 tccatacgctcctcaactgaatcttcaagcaacccccaatgcacttccttctgatttatc 488
           |||||||| || |||| |||||||||||| | |||||||||||| |||||||||||||||
Sbjct: 653 tccatacgttcttcaagtgaatcttcaagtatcccccaatgcacctccttctgatttatc 594

                                                                       
Query: 489 tgttttgcctagtccttactagttccaaccagagcaacaacatcggcatcatcagagatc 548
           ||||||| | ||||||| |||||||||| |||| ||||| |||| |  ||||||  ||| 
Sbjct: 593 tgttttgtcaagtccttgctagttccaatcagaacaacagcatccgagtcatcaatgatt 534

                                                                       
Query: 549 aatgaaggctgcccagcagatacttcaaaaattgtcctttcattgattattccaagcatc 608
           |||| || ||||||||  ||||||| ||||  | | | |||||||||||||||||||| |
Sbjct: 533 aatggagactgcccaggggatacttgaaaatctatgcgttcattgattattccaagcacc 474

                                    
Query: 609 acaagagccttgtgttttctggaga 633
           ||||||| |||||||||| ||||||
Sbjct: 473 acaagag-cttgtgttttgtggaga 450



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 123/150 (82%), Gaps = 3/150 (2%)
 Strand = Plus / Minus

                                                                       
Query: 209 tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
           |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 885 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 826

                                                                       
Query: 269 ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
             | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 825 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 769

                                         
Query: 329 accctgctttccaccttctgaagatttttt 358
           ||||||||||||||||||||| ||| ||||
Sbjct: 768 accctgctttccaccttctgaggatctttt 739
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                            
Query: 366      ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 425
                |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| |
Sbjct: 26148975 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 26148916

                                                    
Query: 426      ttctccatacgctcctcaactgaatcttcaagcaac 461
                |||||||| ||||| |||||||||||||||||||||
Sbjct: 26148915 ttctccatgcgctcttcaactgaatcttcaagcaac 26148880



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 123/148 (83%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                            
Query: 209      tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
                |||||| || ||||| |||||||||||||||||| | ||||| ||||||||||| |||||
Sbjct: 26149383 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 26149324

                                                                            
Query: 269      ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
                  |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 26149323 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 26149267

                                            
Query: 329      accctgctttccaccttctgaagatttt 356
                 ||||||||||||||||| |||||||||
Sbjct: 26149266 tccctgctttccaccttccgaagatttt 26149239



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 461      cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
                |||||||||||| |||||| ||||||| ||||||||| | |||||  | |||||||| ||
Sbjct: 26148698 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 26148639

                                                            
Query: 521      agcaacaacatcggcatcatcagagatcaatgaaggctgcccag 564
                |||||||||||| |  ||||||||||| || || ||||| ||||
Sbjct: 26148638 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 26148595



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                            
Query: 573      tcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttctggag 632
                |||||| |||| | |||||| ||||||||||| | |||||||| ||||||||||||||||
Sbjct: 26148477 tcaaaagttgtgcgttcatttattattccaagaaccacaagag-cttgtgttttctggag 26148419

                 
Query: 633      a 633
                |
Sbjct: 26148418 a 26148418
to top
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J02
          Length = 151636

 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                          
Query: 366    ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 425
              |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| |
Sbjct: 128220 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 128161

                                                  
Query: 426    ttctccatacgctcctcaactgaatcttcaagcaac 461
              |||||||| ||||| |||||||||||||||||||||
Sbjct: 128160 ttctccatgcgctcttcaactgaatcttcaagcaac 128125



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 123/148 (83%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                          
Query: 209    tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
              |||||| || ||||| |||||||||||||||||| | ||||| ||||||||||| |||||
Sbjct: 128628 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 128569

                                                                          
Query: 269    ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
                |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 128568 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 128512

                                          
Query: 329    accctgctttccaccttctgaagatttt 356
               ||||||||||||||||| |||||||||
Sbjct: 128511 tccctgctttccaccttccgaagatttt 128484



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                          
Query: 461    cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
              |||||||||||| |||||| ||||||| ||||||||| | |||||  | |||||||| ||
Sbjct: 127943 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 127884

                                                          
Query: 521    agcaacaacatcggcatcatcagagatcaatgaaggctgcccag 564
              |||||||||||| |  ||||||||||| || || ||||| ||||
Sbjct: 127883 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 127840



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                          
Query: 573    tcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttctggag 632
              |||||| |||| | |||||| ||||||||||| | |||||||| ||||||||||||||||
Sbjct: 127722 tcaaaagttgtgcgttcatttattattccaagaaccacaagag-cttgtgttttctggag 127664

               
Query: 633    a 633
              |
Sbjct: 127663 a 127663
to top
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0453H04
          Length = 175047

 Score =  103 bits (52), Expect = 7e-19
 Identities = 85/96 (88%)
 Strand = Plus / Minus

                                                                         
Query: 366   ttatcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgct 425
             |||||||| || ||||||||||||||||||||||||| | |||| || ||| | |||| |
Sbjct: 13515 ttatcttcggcatctgcatccttgctttctgcttcagttttatctgattctaaaagtgtt 13456

                                                 
Query: 426   ttctccatacgctcctcaactgaatcttcaagcaac 461
             |||||||| ||||| |||||||||||||||||||||
Sbjct: 13455 ttctccatgcgctcttcaactgaatcttcaagcaac 13420



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 123/148 (83%), Gaps = 3/148 (2%)
 Strand = Plus / Minus

                                                                         
Query: 209   tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
             |||||| || ||||| |||||||||||||||||| | ||||| ||||||||||| |||||
Sbjct: 13923 tggaagtgtaagctctggtttcacacgaggtgccaccgaaactatgcttgtttcagattt 13864

                                                                         
Query: 269   ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
               |  |||||| ||| |  ||| ||| |||||| ||||||| ||||   |||| ||||||
Sbjct: 13863 attggttttccctgtggctcctgcaatcttatcttttttgaccttt---ttaacagaacc 13807

                                         
Query: 329   accctgctttccaccttctgaagatttt 356
              ||||||||||||||||| |||||||||
Sbjct: 13806 tccctgctttccaccttccgaagatttt 13779



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                         
Query: 461   cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
             |||||||||||| |||||| ||||||| ||||||||| | |||||  | |||||||| ||
Sbjct: 13238 cccccaatgcacctccttcagatttatttgttttgccaaatccttctttgttccaactag 13179

                                                         
Query: 521   agcaacaacatcggcatcatcagagatcaatgaaggctgcccag 564
             |||||||||||| |  ||||||||||| || || ||||| ||||
Sbjct: 13178 agcaacaacatccgtgtcatcagagattaaagatggctgaccag 13135



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                         
Query: 573   tcaaaaattgtcctttcattgattattccaagcatcacaagagccttgtgttttctggag 632
             |||||| |||| | |||||| ||||||||||| | |||||||| ||||||||||||||||
Sbjct: 13017 tcaaaagttgtgcgttcatttattattccaagaaccacaagag-cttgtgttttctggag 12959

              
Query: 633   a 633
             |
Sbjct: 12958 a 12958
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                           
Query: 369     tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 428
               ||||||| |||||||||||||||||||  ||||| | ||||||||||||| | ||| |||
Sbjct: 5694490 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 5694431

                                            
Query: 429     tccatacgctcctcaactgaatcttcaag 457
               |||||||| || |||| ||||||||||||
Sbjct: 5694430 tccatacgttcttcaagtgaatcttcaag 5694402



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 461     cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
               |||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||
Sbjct: 5694208 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 5694149

                           
Query: 521     agcaacaacatc 532
               | ||||| ||||
Sbjct: 5694148 aacaacagcatc 5694137



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 125/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                           
Query: 209     tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
               |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 5695029 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 5694970

                                                                           
Query: 269     ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
                 | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 5694969 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 5694913

                                               
Query: 329     accctgctttccaccttctgaagattttttct 360
               ||||||||||||||||||||| ||| ||||||
Sbjct: 5694912 accctgctttccaccttctgaggatcttttct 5694881



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                              
Query: 587     ttcattgattattccaagcatcacaagagccttgtgttttctggaga 633
               |||||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct: 5693966 ttcattgattattccaagcaccacaagag-cttgtgttttgtggaga 5693921
to top
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1119_B04
          Length = 151721

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 428
            ||||||| |||||||||||||||||||  ||||| | ||||||||||||| | ||| |||
Sbjct: 1518 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 1459

                                         
Query: 429  tccatacgctcctcaactgaatcttcaag 457
            |||||||| || |||| ||||||||||||
Sbjct: 1458 tccatacgttcttcaagtgaatcttcaag 1430



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                        
Query: 461  cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
            |||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||
Sbjct: 1236 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 1177

                        
Query: 521  agcaacaacatc 532
            | ||||| ||||
Sbjct: 1176 aacaacagcatc 1165



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 125/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 209  tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
            |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 2057 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 1998

                                                                        
Query: 269  ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
              | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 1997 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 1941

                                            
Query: 329  accctgctttccaccttctgaagattttttct 360
            ||||||||||||||||||||| ||| ||||||
Sbjct: 1940 accctgctttccaccttctgaggatcttttct 1909



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                          
Query: 587 ttcattgattattccaagcatcacaagagccttgtgttttctggaga 633
           |||||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct: 994 ttcattgattattccaagcaccacaagag-cttgtgttttgtggaga 949
to top
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0431A02
          Length = 165038

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                          
Query: 369    tcttctgcgtctgcatccttgctttctgcttcagctctatcagaatctgagagtgctttc 428
              ||||||| |||||||||||||||||||  ||||| | ||||||||||||| | ||| |||
Sbjct: 156182 tcttctgtgtctgcatccttgctttctatttcagttttatcagaatctgaaattgccttc 156123

                                           
Query: 429    tccatacgctcctcaactgaatcttcaag 457
              |||||||| || |||| ||||||||||||
Sbjct: 156122 tccatacgttcttcaagtgaatcttcaag 156094



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                          
Query: 461    cccccaatgcacttccttctgatttatctgttttgcctagtccttactagttccaaccag 520
              |||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||
Sbjct: 155900 cccccaatgcacctccttctgatttatctgttttgtcaagtccttgctagttccaatcag 155841

                          
Query: 521    agcaacaacatc 532
              | ||||| ||||
Sbjct: 155840 aacaacagcatc 155829



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 125/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                          
Query: 209    tggaagggttagctccggtttcacacgaggtgccgcagaaaccatgcttgtttcggattt 268
              |||||| |||||||| ||||| || || |||||   |||||||||||| ||||| |||||
Sbjct: 156721 tggaagcgttagctctggtttaactcgtggtgctatagaaaccatgctagtttcagattt 156662

                                                                          
Query: 269    ggtatttttccttgttggacctacaaacttatcctttttgagctttttgttaagagaacc 328
                | ||||||| ||| |  ||||||||||| |||||||||| |||||| |   | || ||
Sbjct: 156661 catgtttttccctgtggttcctacaaacttgtcctttttgatctttttat---gtgagcc 156605

                                              
Query: 329    accctgctttccaccttctgaagattttttct 360
              ||||||||||||||||||||| ||| ||||||
Sbjct: 156604 accctgctttccaccttctgaggatcttttct 156573



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                             
Query: 587    ttcattgattattccaagcatcacaagagccttgtgttttctggaga 633
              |||||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct: 155658 ttcattgattattccaagcaccacaagag-cttgtgttttgtggaga 155613
to top
>gb|AY835629.1| Homo sapiens superoxide dismutase 1, soluble (amyotrophic lateral
            sclerosis 1 (adult)) (SOD1) gene, complete cds
          Length = 12537

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 75   taggaatggtatttatatttttcaaaggct 104
            |||||||||| ||||||||||| |||||||
Sbjct: 2060 taggaatggtttttatatttttaaaaggct 2089
to top
>emb|CR624343.1| full-length cDNA clone CS0DC018YI22 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1632

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 75  taggaatggtatttatatttttcaaaggct 104
           |||||||||| ||||||||||| |||||||
Sbjct: 678 taggaatggtttttatatttttaaaaggct 707
to top
>gb|AC090111.1|AC090111 Homo sapiens chromosome 21 clone unknown, complete sequence
          Length = 136653

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 75     taggaatggtatttatatttttcaaaggct 104
              |||||||||| ||||||||||| |||||||
Sbjct: 124359 taggaatggtttttatatttttaaaaggct 124330
to top
>gb|AC026776.4|AC026776 Homo sapiens chromosome 21 clone CTC-304G18, complete sequence
          Length = 136653

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 75     taggaatggtatttatatttttcaaaggct 104
              |||||||||| ||||||||||| |||||||
Sbjct: 124359 taggaatggtttttatatttttaaaaggct 124330
to top
>dbj|AP000031.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 2/28, complete
             sequence
          Length = 149298

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 75    taggaatggtatttatatttttcaaaggct 104
             |||||||||| ||||||||||| |||||||
Sbjct: 56350 taggaatggtttttatatttttaaaaggct 56379
to top
>dbj|AP000253.2| Homo sapiens genomic DNA, chromosome 21 clone:CMP21-S552, complete
             sequence
          Length = 22392

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 75    taggaatggtatttatatttttcaaaggct 104
             |||||||||| ||||||||||| |||||||
Sbjct: 18160 taggaatggtttttatatttttaaaaggct 18189
to top
>dbj|AP001711.1| Homo sapiens genomic DNA, chromosome 21q, section 55/105
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 75     taggaatggtatttatatttttcaaaggct 104
              |||||||||| ||||||||||| |||||||
Sbjct: 303356 taggaatggtttttatatttttaaaaggct 303385
to top
>dbj|AP000213.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 11/12, complete sequence
          Length = 100000

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 75    taggaatggtatttatatttttcaaaggct 104
             |||||||||| ||||||||||| |||||||
Sbjct: 16344 taggaatggtttttatatttttaaaaggct 16373
to top
>gb|DQ386648.1| Astatotilapia burtoni clone BAC 26M7 platelet-derived growth factor
             receptor beta a (pdgfrba) and colony-stimulating factor 1
             receptor a (csf1ra) genes, complete cds
          Length = 97628

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 386   cttgctttctgcttcagctct 406
             |||||||||||||||||||||
Sbjct: 24332 cttgctttctgcttcagctct 24352
to top
>gb|AC139349.4| Mus musculus BAC clone RP24-318A14 from chromosome 8, complete sequence
          Length = 199464

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 549    aatgaaggctgcccagcagatactt 573
              |||||||||| ||||||||||||||
Sbjct: 154919 aatgaaggcttcccagcagatactt 154943
to top
>emb|AL160236.4|CNS01RH0 Human chromosome 14 DNA sequence BAC R-193F5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192401

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 579   attgtcctttcattgattatt 599
             |||||||||||||||||||||
Sbjct: 17149 attgtcctttcattgattatt 17129
to top
>emb|AL808128.4| Mouse DNA sequence from clone RP23-387C21 on chromosome 2, complete
              sequence
          Length = 184736

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    caccctgctttccaccttctg 348
              |||||||||||||||||||||
Sbjct: 148087 caccctgctttccaccttctg 148107
to top
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 448     aatcttcaagcaacccccaatgcacttc 475
               ||||||||||||||||| |||| |||||
Sbjct: 2255540 aatcttcaagcaaccccaaatgtacttc 2255567
to top
>gb|BC081137.1| Xenopus laevis MGC83957 protein, mRNA (cDNA clone MGC:83957
            IMAGE:6862393), complete cds
          Length = 3593

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 446  tgaatcttcaagcaaccccc 465
            ||||||||||||||||||||
Sbjct: 2690 tgaatcttcaagcaaccccc 2671
to top
>gb|AE013106.1| Thermoanaerobacter tengcongensis MB4, section 133 of 244 of the
            complete genome
          Length = 9910

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  tatagagaaatttacaaaga 168
            ||||||||||||||||||||
Sbjct: 6380 tatagagaaatttacaaaga 6361
to top
>gb|AC108822.9| Mus musculus chromosome 3, clone RP23-63A19, complete sequence
          Length = 158678

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   cccccaatgcacttccttct 480
             ||||||||||||||||||||
Sbjct: 90054 cccccaatgcacttccttct 90073
to top
>ref|XM_711645.1| Candida albicans SC5314 mitochondrial DNA polymerase (CaO19_3431),
            mRNA
          Length = 3687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ttttcttgttattatcttct 374
            ||||||||||||||||||||
Sbjct: 3463 ttttcttgttattatcttct 3444
to top
>ref|XM_711586.1| Candida albicans SC5314 hypothetical protein (CaO19_10935), mRNA
          Length = 3687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ttttcttgttattatcttct 374
            ||||||||||||||||||||
Sbjct: 3463 ttttcttgttattatcttct 3444
to top
>gb|AC125325.4| Mus musculus BAC clone RP23-296K22 from chromosome 9, complete sequence
          Length = 156124

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   cttgctttctgcttcagctc 405
             ||||||||||||||||||||
Sbjct: 90802 cttgctttctgcttcagctc 90821
to top
>gb|AC132450.3| Mus musculus BAC clone RP23-187N8 from chromosome 18, complete sequence
          Length = 201282

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    cctagtccttactagttcca 515
              ||||||||||||||||||||
Sbjct: 104039 cctagtccttactagttcca 104020
to top
>gb|AC122034.3| Mus musculus BAC clone RP24-403M18 from chromosome 15, complete
             sequence
          Length = 182891

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   cttatcctttttgagctttt 315
             ||||||||||||||||||||
Sbjct: 15520 cttatcctttttgagctttt 15501
to top
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence
          Length = 245757

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   cttatcctttttgagctttt 315
             ||||||||||||||||||||
Sbjct: 54845 cttatcctttttgagctttt 54864
to top
>ref|XM_947223.1| Theileria annulata strain Ankara hypothetical protein (TA12980)
            partial mRNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 401  agctctatcagaatctgaga 420
            ||||||||||||||||||||
Sbjct: 1230 agctctatcagaatctgaga 1211
to top
>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   agcttcttatagagaaattt 161
             ||||||||||||||||||||
Sbjct: 73466 agcttcttatagagaaattt 73485
to top
>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence
          Length = 163816

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ggtatttatatttttcaaag 101
             ||||||||||||||||||||
Sbjct: 33770 ggtatttatatttttcaaag 33751
to top
>gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, complete sequence
          Length = 159143

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    tctgaagattttttcttgtt 364
              ||||||||||||||||||||
Sbjct: 100185 tctgaagattttttcttgtt 100204
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 595     ttattccaagcatcacaaga 614
               ||||||||||||||||||||
Sbjct: 3545240 ttattccaagcatcacaaga 3545259
to top
>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193809

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    cctttttgagctttttgtta 320
              ||||||||||||||||||||
Sbjct: 171399 cctttttgagctttttgtta 171418
to top
>gb|AC092278.3| Homo sapiens chromosome 5 clone CTD-2012B7, complete sequence
          Length = 123469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     ttataggaatggtatttatatttt 95
              ||||| ||||||||||||||||||
Sbjct: 123380 ttataagaatggtatttatatttt 123357
to top
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete
             sequence
          Length = 90283

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tcaactgaatcttcaagcaa 460
             ||||||||||||||||||||
Sbjct: 70398 tcaactgaatcttcaagcaa 70417
to top
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence
          Length = 134319

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   ttataggaatggtatttatatttt 95
            ||||| ||||||||||||||||||
Sbjct: 7725 ttataagaatggtatttatatttt 7702
to top
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence
          Length = 151389

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tggtatttatatttttcaaa 100
             ||||||||||||||||||||
Sbjct: 23428 tggtatttatatttttcaaa 23447
to top
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     agcttcttatagagaaattt 161
               ||||||||||||||||||||
Sbjct: 1094110 agcttcttatagagaaattt 1094091
to top
>gb|AC153528.2| Mus musculus 10 BAC RP23-75N1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 159605

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    cctttttgagctttttgtta 320
              ||||||||||||||||||||
Sbjct: 155336 cctttttgagctttttgtta 155317
to top
>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence
          Length = 180424

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 583  tcctttcattgattattcca 602
            ||||||||||||||||||||
Sbjct: 9807 tcctttcattgattattcca 9826
to top
>gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosome 9, complete sequence
          Length = 190619

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   cttgctttctgcttcagctc 405
             ||||||||||||||||||||
Sbjct: 24893 cttgctttctgcttcagctc 24874
to top
>gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N14, complete sequence
          Length = 172237

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   agatcaaactgagcttctta 150
             ||||||||||||||||||||
Sbjct: 12671 agatcaaactgagcttctta 12652
to top
>gb|BC042662.1| Mus musculus, Similar to zinc finger protein 60, clone IMAGE:2645174,
            mRNA
          Length = 4839

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tggtatttatatttttcaaa 100
            ||||||||||||||||||||
Sbjct: 1541 tggtatttatatttttcaaa 1560
to top
>gb|AC175497.2| Pan troglodytes BAC clone CH251-951E13 from chromosome y, complete
             sequence
          Length = 198653

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   tctgaagattttttcttgtt 364
             ||||||||||||||||||||
Sbjct: 69789 tctgaagattttttcttgtt 69770
to top
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    agcttcttatagagaaattt 161
              ||||||||||||||||||||
Sbjct: 977332 agcttcttatagagaaattt 977351
to top
>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tggtatttatatttttcaaa 100
             ||||||||||||||||||||
Sbjct: 72024 tggtatttatatttttcaaa 72043
to top
>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence
          Length = 150467

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agatcaaactgagcttctta 150
             ||||||||||||||||||||
Sbjct: 95111 agatcaaactgagcttctta 95130
to top
>gb|AC104770.10| Homo sapiens chromosome 17, clone RP11-960B9, complete sequence
          Length = 188574

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   agctccggtttcacacgagg 238
             ||||||||||||||||||||
Sbjct: 10297 agctccggtttcacacgagg 10278
to top
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    agcttcttatagagaaattt 161
              ||||||||||||||||||||
Sbjct: 976653 agcttcttatagagaaattt 976672
to top
>gb|AC010516.4|AC010516 Homo sapiens chromosome 19 clone LLNLR-251C10, complete sequence
          Length = 39209

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   cccagcagatacttcaaaaa 579
             ||||||||||||||||||||
Sbjct: 18162 cccagcagatacttcaaaaa 18181
to top
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 595     ttattccaagcatcacaaga 614
               ||||||||||||||||||||
Sbjct: 3637594 ttattccaagcatcacaaga 3637613
to top
>emb|AL732429.11| Mouse DNA sequence from clone RP23-89N11 on chromosome X, complete
              sequence
          Length = 164991

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tggtatttatatttttcaaa 100
              ||||||||||||||||||||
Sbjct: 101502 tggtatttatatttttcaaa 101483
to top
>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tggtatttatatttttcaaa 100
              ||||||||||||||||||||
Sbjct: 140091 tggtatttatatttttcaaa 140072
to top
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 529    catcggcatcatcagagatcaatg 552
              ||||||||||| ||||||||||||
Sbjct: 692672 catcggcatcagcagagatcaatg 692649
to top
>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete
             sequence
          Length = 208663

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   cccaatgcacttccttctga 482
             ||||||||||||||||||||
Sbjct: 31967 cccaatgcacttccttctga 31986
to top
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 197426

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 603    agcatcacaagagccttgtgtttt 626
              ||||| ||||||||||||||||||
Sbjct: 174001 agcattacaagagccttgtgtttt 174024
to top
>emb|AL121766.5|CNS01DSA Human chromosome 14 DNA sequence BAC R-412H8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158064

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   ttctgaagattttttcttgttatt 367
             ||||||||||||||| ||||||||
Sbjct: 27869 ttctgaagattttttattgttatt 27846
to top
>emb|AJ506902.1|BOC506902 Buthus occitanus mardochei partial mitochondrial COI gene for
           cytochrome oxidase subunit I, haplotype HA6b
          Length = 466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ttttttcttgttattatcttctgc 376
           |||||| |||||||||||||||||
Sbjct: 176 tttttttttgttattatcttctgc 199
to top
>emb|AJ506901.1|BOC506901 Buthus occitanus mardochei partial mitochondrial COI gene for
           cytochrome oxidase subunit I, haplotype HA6a
          Length = 466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ttttttcttgttattatcttctgc 376
           |||||| |||||||||||||||||
Sbjct: 176 tttttttttgttattatcttctgc 199
to top
>emb|AJ506897.1|BOC506897 Buthus occitanus mardochei partial mitochondrial COI gene for
           cytochrome oxidase subunit I, haplotype HA3b
          Length = 466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ttttttcttgttattatcttctgc 376
           |||||| |||||||||||||||||
Sbjct: 176 tttttttttgttattatcttctgc 199
to top
>emb|AJ506896.1|BOC506896 Buthus occitanus mardochei partial mitochondrial COI gene for
           cytochrome oxidase subunit I, haplotype HA3a
          Length = 466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ttttttcttgttattatcttctgc 376
           |||||| |||||||||||||||||
Sbjct: 176 tttttttttgttattatcttctgc 199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,907,037
Number of Sequences: 3902068
Number of extensions: 6907037
Number of successful extensions: 147778
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147405
Number of HSP's gapped (non-prelim): 359
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top