ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF131222.1|AF131222 Lophopyrum elongatum protein serine/threo... 618 e-174
2gb|AF339747.1|AF339747 Lophopyrum elongatum protein kinase (ESI4... 618 e-174
3ref|NM_196707.1| Oryza sativa (japonica cultivar-group) putative... 182 1e-42
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 182 1e-42
5gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 182 1e-42
6dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 1e-42
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 182 1e-42
8ref|XM_851060.1| PREDICTED: Canis familiaris similar to Myosin I... 44 0.61
9ref|XM_843331.1| PREDICTED: Canis familiaris similar to Myosin I... 44 0.61
10ref|XM_747710.1| Aspergillus fumigatus Af293 ABC transporter (Af... 42 2.4
11gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, comp... 42 2.4
12emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercon... 42 2.4
13gb|AC008619.7| Homo sapiens chromosome 5 clone CTB-147C13, compl... 42 2.4
14dbj|AP002852.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.4
15dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 2.4
16gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 9.5
17gb|AY900451.1| Shigella flexneri strain SFL124 O-antigen modific... 40 9.5
18gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosom... 40 9.5
19ref|NM_004157.2| Homo sapiens protein kinase, cAMP-dependent, re... 40 9.5
20gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, com... 40 9.5
21gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 9.5
22gb|AC005178.1| Homo sapiens chromosome 5, P1 clone 328E3 (LBNL H... 40 9.5
23ref|XM_658339.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.5
24ref|XM_838404.1| Leishmania major strain Friedlin hypothetical p... 40 9.5
25gb|AC122475.2| Mus musculus BAC clone RP24-334J11 from chromosom... 40 9.5
26gb|AE004302.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 9.5
27gb|BC002763.2| Homo sapiens protein kinase, cAMP-dependent, regu... 40 9.5
28emb|AL354766.17| Human DNA sequence from clone RP11-323C15 on ch... 40 9.5
29gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence 40 9.5
30emb|X14968.1|HSCAMPR2 Human testis mRNA for the RII-alpha subuni... 40 9.5
31gb|AC141002.8| Homo sapiens 3 BAC RP11-572O6 (Roswell Park Cance... 40 9.5
32gb|BT008239.1| Synthetic construct Homo sapiens protein kinase, ... 40 9.5
33gb|BT007225.1| Homo sapiens protein kinase, cAMP-dependent, regu... 40 9.5
34gb|AF533978.1| Rattus norvegicus cAMP-dependent protein kinase t... 40 9.5
35gb|AF533977.1| Mus musculus cAMP-dependent protein kinase type I... 40 9.5
36gb|AC090662.9| Homo sapiens chromosome 11, clone RP11-184J19, co... 40 9.5
37gb|BC075623.1| Mus musculus protein kinase, cAMP dependent regul... 40 9.5
38gb|AC079361.17| Homo sapiens 11 BAC RP11-184J19 (Roswell Park Ca... 40 9.5
39gb|AC099056.2| Homo sapiens chromosome 3 clone RP11-585O21, comp... 40 9.5
40gb|AC099545.2| Homo sapiens chromosome 3 clone RP11-601G18, comp... 40 9.5
41dbj|AK132824.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.5
42dbj|AK132728.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.5
43dbj|AB169119.1| Macaca fascicularis testis cDNA, clone: QtsA-173... 40 9.5
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
45ref|NM_019264.1| Rattus norvegicus protein kinase, cAMP-dependen... 40 9.5
46gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 9.5
47dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
48dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
49gb|AY892119.1| Synthetic construct Homo sapiens clone FLH026678.... 40 9.5
50gb|AY892118.1| Synthetic construct Homo sapiens clone FLH026677.... 40 9.5
51gb|AY889661.1| Synthetic construct Homo sapiens clone FLH026682.... 40 9.5
52gb|AY889660.1| Synthetic construct Homo sapiens clone FLH026681.... 40 9.5
53gb|BC080276.1| Mus musculus protein kinase, cAMP dependent regul... 40 9.5
54emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 40 9.5
55emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 9.5
56emb|AJ550784.1|PCA550784 Procavia capensis partial hspb3 gene fo... 40 9.5
57gb|AC131117.4| Mus musculus BAC clone RP24-351I18 from 13, compl... 40 9.5
58ref|NM_008924.1| Mus musculus protein kinase, cAMP dependent reg... 40 9.5
59emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 9.5
60gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome... 40 9.5
61emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chr... 40 9.5
62gb|J02934.1|RATPK2CMP Rat cAMP-dependent protein kinase type II ... 40 9.5
63gb|J02935.1|MUSPK2CMP Mouse cAMP-dependent protein kinase type I... 40 9.5 
>gb|AF131222.1|AF131222 Lophopyrum elongatum protein serine/threonine kinase (ESI47) mRNA,
            complete cds
          Length = 1878

 Score =  618 bits (312), Expect = e-174
 Identities = 388/415 (93%), Gaps = 1/415 (0%)
 Strand = Plus / Minus

                                                                        
Query: 281  tctggatgttaaagtcatgaagaggaacatctcatccatattttgtgtcattgtgttctc 340
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1540 tctggatgttaaagtcatgaagaggaacatctcatccatattttgagtcattgtgttctc 1481

                                                                        
Query: 341  acaagcttgggtgtccacttgtgccatgtaaaccatctaccatctccagctttaatatca 400
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 1480 acaagcttgggtgtccacttgtgccatctaaaccatctaccatctccagctttaatatct 1421

                                                                        
Query: 401  gcaatcctcctcttcagatcaaggcctttcnnnnnnnnctcatcactagccaattctttc 460
            || |||||||||||||||| ||||||||||        |||||||||||||| || ||| 
Sbjct: 1420 gcgatcctcctcttcagattaaggcctttcctttttttctcatcactagccagttttttt 1361

                                                                        
Query: 461  gaatggcttatcaggggatgctctggtgttccaaggtcactgctatcgacaatcttctgc 520
            |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1360 gaatggcttatcaggggacgctctggtgttccaaggtcactgctgtcgacaatcttctgc 1301

                                                                        
Query: 521  accatctccagcacctcgctcatcttaggtctataccttgcattgcgtaccaggcacttg 580
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1300 accatctccagcacctcgctcatcttaggtctataccttgcatggcgcaccaggcacttg 1241

                                                                        
Query: 581  tttgctagcgaggcaatcttggctgccgacttcaggctgtagttcccttcgagccttgga 640
            ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1240 tttgccagcgaagcaatcctggctgccgacttcaggttgtagttcccttcgagccttgga 1181

                                                                   
Query: 641  tccattatggtctcaaacttcttggtgtcagnaggagtagggcttcacccattcc 695
            ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 1180 tccattatggtctcaaatttcttggtgtc-ggaggagtagggcttcacccattcc 1127



 Score =  268 bits (135), Expect = 2e-68
 Identities = 227/255 (89%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 27   tgttaagctgtacacccaagatttctactccaaaaaggactgcttcagttttgattttcc 86
            |||||| ||||||||| || ||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1804 tgttaaactgtacacc-aatatttctacttcaaaaaggactgcttcagttctgattttcc 1746

                                                                        
Query: 87   agctcttatgcaaacatgtaatgcccaactatgtggatagcggacactgcatgtgtttaa 146
            |||||||||| |||||||||||||| ||||||||||  || ||||||||| || || | |
Sbjct: 1745 agctcttatgaaaacatgtaatgccgaactatgtggcgagtggacactgcctgcgtgtga 1686

                                                                        
Query: 147  ccccacaaatccaggcatagatattatttagtgatgatagcagtagggctgccaaatcgt 206
            || |||||| |||| |||||  |||||||||||||||||||| |||| ||||||||||| 
Sbjct: 1685 cctcacaaacccagccatagccattatttagtgatgatagcattaggcctgccaaatcgc 1626

                                                                        
Query: 207  ttgtttttagttatcacgttctctgatttgtatggtaaacagcaaacccaagtggcattt 266
            |||||||||||||||| ||||||||| ||||| |||||||||| ||| ||||||||||||
Sbjct: 1625 ttgtttttagttatcatgttctctgaattgtacggtaaacagc-aactcaagtggcattt 1567

                           
Query: 267  cagccgctgctgttt 281
            |||||| ||||||||
Sbjct: 1566 cagccgttgctgttt 1552
to top
>gb|AF339747.1|AF339747 Lophopyrum elongatum protein kinase (ESI47) gene, complete cds
          Length = 5826

 Score =  618 bits (312), Expect = e-174
 Identities = 388/415 (93%), Gaps = 1/415 (0%)
 Strand = Plus / Minus

                                                                        
Query: 281  tctggatgttaaagtcatgaagaggaacatctcatccatattttgtgtcattgtgttctc 340
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5267 tctggatgttaaagtcatgaagaggaacatctcatccatattttgagtcattgtgttctc 5208

                                                                        
Query: 341  acaagcttgggtgtccacttgtgccatgtaaaccatctaccatctccagctttaatatca 400
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 5207 acaagcttgggtgtccacttgtgccatctaaaccatctaccatctccagctttaatatct 5148

                                                                        
Query: 401  gcaatcctcctcttcagatcaaggcctttcnnnnnnnnctcatcactagccaattctttc 460
            || |||||||||||||||| ||||||||||        |||||||||||||| || ||| 
Sbjct: 5147 gcgatcctcctcttcagattaaggcctttcctttttttctcatcactagccagttttttt 5088

                                                                        
Query: 461  gaatggcttatcaggggatgctctggtgttccaaggtcactgctatcgacaatcttctgc 520
            |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5087 gaatggcttatcaggggacgctctggtgttccaaggtcactgctgtcgacaatcttctgc 5028

                                                                        
Query: 521  accatctccagcacctcgctcatcttaggtctataccttgcattgcgtaccaggcacttg 580
            ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5027 accatctccagcacctcgctcatcttaggtctataccttgcatggcgcaccaggcacttg 4968

                                                                        
Query: 581  tttgctagcgaggcaatcttggctgccgacttcaggctgtagttcccttcgagccttgga 640
            ||||| ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4967 tttgccagcgaagcaatcctggctgccgacttcaggttgtagttcccttcgagccttgga 4908

                                                                   
Query: 641  tccattatggtctcaaacttcttggtgtcagnaggagtagggcttcacccattcc 695
            ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||
Sbjct: 4907 tccattatggtctcaaatttcttggtgtc-ggaggagtagggcttcacccattcc 4854



 Score =  268 bits (135), Expect = 2e-68
 Identities = 227/255 (89%), Gaps = 2/255 (0%)
 Strand = Plus / Minus

                                                                        
Query: 27   tgttaagctgtacacccaagatttctactccaaaaaggactgcttcagttttgattttcc 86
            |||||| ||||||||| || ||||||||| |||||||||||||||||||| |||||||||
Sbjct: 5531 tgttaaactgtacacc-aatatttctacttcaaaaaggactgcttcagttctgattttcc 5473

                                                                        
Query: 87   agctcttatgcaaacatgtaatgcccaactatgtggatagcggacactgcatgtgtttaa 146
            |||||||||| |||||||||||||| ||||||||||  || ||||||||| || || | |
Sbjct: 5472 agctcttatgaaaacatgtaatgccgaactatgtggcgagtggacactgcctgcgtgtga 5413

                                                                        
Query: 147  ccccacaaatccaggcatagatattatttagtgatgatagcagtagggctgccaaatcgt 206
            || |||||| |||| |||||  |||||||||||||||||||| |||| ||||||||||| 
Sbjct: 5412 cctcacaaacccagccatagccattatttagtgatgatagcattaggcctgccaaatcgc 5353

                                                                        
Query: 207  ttgtttttagttatcacgttctctgatttgtatggtaaacagcaaacccaagtggcattt 266
            |||||||||||||||| ||||||||| ||||| |||||||||| ||| ||||||||||||
Sbjct: 5352 ttgtttttagttatcatgttctctgaattgtacggtaaacagc-aactcaagtggcattt 5294

                           
Query: 267  cagccgctgctgttt 281
            |||||| ||||||||
Sbjct: 5293 cagccgttgctgttt 5279
to top
>ref|NM_196707.1| Oryza sativa (japonica cultivar-group) putative serine/threonine
            kinase (OSJNBa0046P18.16), mRNA
          Length = 1338

 Score =  182 bits (92), Expect = 1e-42
 Identities = 188/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                        
Query: 473  aggggatgctctggtgttccaaggtcactgctatcgacaatcttctgcaccatctccagc 532
            ||||||||||| || ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 1190 aggggatgctccggcgttccgaggtcagtgctatcgacgatcttctgcaccatctccagc 1131

                                                                        
Query: 533  acctcgctcatcttaggtctataccttgcattgcgtaccaggcacttgtttgctagcgag 592
            |||||||||||||| || |  | ||| || | ||| || |||||||||||||| | ||||
Sbjct: 1130 acctcgctcatctttggccggtgcctggcgtggcgcacgaggcacttgtttgccaccgag 1071

                                                                        
Query: 593  gcaatcttggctgccgacttcaggctgtagttcccttcgagccttggatccattatggtc 652
            || | |||||| |||||||||| ||||||  ||||||| |||||||||||||||||| | 
Sbjct: 1070 gcgagcttggccgccgacttcaagctgtaactcccttcaagccttggatccattatgatt 1011

                                                   
Query: 653  tcaaacttcttggtgtcagnaggagtagggcttcaccca 691
            |||| |||||| | |||||  ||||||||||||||||||
Sbjct: 1010 tcaagcttctttgagtcagt-ggagtagggcttcaccca 973



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 88/105 (83%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                        
Query: 328  tcattgtgttctcacaagcttgggtgtccacttgtgccatgtaaaccatct---accatc 384
            |||||||||||| ||||| |||||| ||||  | |||||||||||||||||   | |  |
Sbjct: 1338 tcattgtgttctgacaagtttgggtctccatctctgccatgtaaaccatctctgatcccc 1279

                                                         
Query: 385  tccagctttaatatcagcaatcctcctcttcagatcaaggccttt 429
            ||||||||||||||||||||  || |||||||| ||||| |||||
Sbjct: 1278 tccagctttaatatcagcaaatcttctcttcaggtcaagcccttt 1234
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  182 bits (92), Expect = 1e-42
 Identities = 188/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                            
Query: 473      aggggatgctctggtgttccaaggtcactgctatcgacaatcttctgcaccatctccagc 532
                ||||||||||| || ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 15407109 aggggatgctccggcgttccgaggtcagtgctatcgacgatcttctgcaccatctccagc 15407168

                                                                            
Query: 533      acctcgctcatcttaggtctataccttgcattgcgtaccaggcacttgtttgctagcgag 592
                |||||||||||||| || |  | ||| || | ||| || |||||||||||||| | ||||
Sbjct: 15407169 acctcgctcatctttggccggtgcctggcgtggcgcacgaggcacttgtttgccaccgag 15407228

                                                                            
Query: 593      gcaatcttggctgccgacttcaggctgtagttcccttcgagccttggatccattatggtc 652
                || | |||||| |||||||||| ||||||  ||||||| |||||||||||||||||| | 
Sbjct: 15407229 gcgagcttggccgccgacttcaagctgtaactcccttcaagccttggatccattatgatt 15407288

                                                       
Query: 653      tcaaacttcttggtgtcagnaggagtagggcttcaccca 691
                |||| |||||| | |||||  ||||||||||||||||||
Sbjct: 15407289 tcaagcttctttgagtcagt-ggagtagggcttcaccca 15407326



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 90/107 (84%), Gaps = 3/107 (2%)
 Strand = Plus / Plus

                                                                            
Query: 326      tgtcattgtgttctcacaagcttgggtgtccacttgtgccatgtaaaccatct---acca 382
                |||||||||||||| ||||| |||||| ||||  | |||||||||||||||||   | | 
Sbjct: 15406959 tgtcattgtgttctgacaagtttgggtctccatctctgccatgtaaaccatctctgatcc 15407018

                                                               
Query: 383      tctccagctttaatatcagcaatcctcctcttcagatcaaggccttt 429
                 |||||||||||||||||||||  || |||||||| ||||| |||||
Sbjct: 15407019 cctccagctttaatatcagcaaatcttctcttcaggtcaagcccttt 15407065



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 47       atttctactccaaaaaggactgcttcagttttgatttt 84
                ||||||||||||||||||||| ||| || |||||||||
Sbjct: 15406765 atttctactccaaaaaggactacttgagctttgatttt 15406802
to top
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
              complete sequence
          Length = 144720

 Score =  182 bits (92), Expect = 1e-42
 Identities = 188/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                          
Query: 473    aggggatgctctggtgttccaaggtcactgctatcgacaatcttctgcaccatctccagc 532
              ||||||||||| || ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 124472 aggggatgctccggcgttccgaggtcagtgctatcgacgatcttctgcaccatctccagc 124531

                                                                          
Query: 533    acctcgctcatcttaggtctataccttgcattgcgtaccaggcacttgtttgctagcgag 592
              |||||||||||||| || |  | ||| || | ||| || |||||||||||||| | ||||
Sbjct: 124532 acctcgctcatctttggccggtgcctggcgtggcgcacgaggcacttgtttgccaccgag 124591

                                                                          
Query: 593    gcaatcttggctgccgacttcaggctgtagttcccttcgagccttggatccattatggtc 652
              || | |||||| |||||||||| ||||||  ||||||| |||||||||||||||||| | 
Sbjct: 124592 gcgagcttggccgccgacttcaagctgtaactcccttcaagccttggatccattatgatt 124651

                                                     
Query: 653    tcaaacttcttggtgtcagnaggagtagggcttcaccca 691
              |||| |||||| | |||||  ||||||||||||||||||
Sbjct: 124652 tcaagcttctttgagtcagt-ggagtagggcttcaccca 124689



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 90/107 (84%), Gaps = 3/107 (2%)
 Strand = Plus / Plus

                                                                          
Query: 326    tgtcattgtgttctcacaagcttgggtgtccacttgtgccatgtaaaccatct---acca 382
              |||||||||||||| ||||| |||||| ||||  | |||||||||||||||||   | | 
Sbjct: 124322 tgtcattgtgttctgacaagtttgggtctccatctctgccatgtaaaccatctctgatcc 124381

                                                             
Query: 383    tctccagctttaatatcagcaatcctcctcttcagatcaaggccttt 429
               |||||||||||||||||||||  || |||||||| ||||| |||||
Sbjct: 124382 cctccagctttaatatcagcaaatcttctcttcaggtcaagcccttt 124428



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 47     atttctactccaaaaaggactgcttcagttttgatttt 84
              ||||||||||||||||||||| ||| || |||||||||
Sbjct: 124128 atttctactccaaaaaggactacttgagctttgatttt 124165
to top
>dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M01, full
            insert sequence
          Length = 4119

 Score =  182 bits (92), Expect = 1e-42
 Identities = 188/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                        
Query: 473  aggggatgctctggtgttccaaggtcactgctatcgacaatcttctgcaccatctccagc 532
            ||||||||||| || ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 1869 aggggatgctccggcgttccgaggtcagtgctatcgacgatcttctgcaccatctccagc 1928

                                                                        
Query: 533  acctcgctcatcttaggtctataccttgcattgcgtaccaggcacttgtttgctagcgag 592
            |||||||||||||| || |  | ||| || | ||| || |||||||||||||| | ||||
Sbjct: 1929 acctcgctcatctttggccggtgcctggcgtggcgcacgaggcacttgtttgccaccgag 1988

                                                                        
Query: 593  gcaatcttggctgccgacttcaggctgtagttcccttcgagccttggatccattatggtc 652
            || | |||||| |||||||||| ||||||  ||||||| |||||||||||||||||| | 
Sbjct: 1989 gcgagcttggccgccgacttcaagctgtaactcccttcaagccttggatccattatgatt 2048

                                                   
Query: 653  tcaaacttcttggtgtcagnaggagtagggcttcaccca 691
            |||| |||||| | |||||  ||||||||||||||||||
Sbjct: 2049 tcaagcttctttgagtcagt-ggagtagggcttcaccca 2086
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  182 bits (92), Expect = 1e-42
 Identities = 188/219 (85%), Gaps = 1/219 (0%)
 Strand = Plus / Plus

                                                                            
Query: 473      aggggatgctctggtgttccaaggtcactgctatcgacaatcttctgcaccatctccagc 532
                ||||||||||| || ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 15415350 aggggatgctccggcgttccgaggtcagtgctatcgacgatcttctgcaccatctccagc 15415409

                                                                            
Query: 533      acctcgctcatcttaggtctataccttgcattgcgtaccaggcacttgtttgctagcgag 592
                |||||||||||||| || |  | ||| || | ||| || |||||||||||||| | ||||
Sbjct: 15415410 acctcgctcatctttggccggtgcctggcgtggcgcacgaggcacttgtttgccaccgag 15415469

                                                                            
Query: 593      gcaatcttggctgccgacttcaggctgtagttcccttcgagccttggatccattatggtc 652
                || | |||||| |||||||||| ||||||  ||||||| |||||||||||||||||| | 
Sbjct: 15415470 gcgagcttggccgccgacttcaagctgtaactcccttcaagccttggatccattatgatt 15415529

                                                       
Query: 653      tcaaacttcttggtgtcagnaggagtagggcttcaccca 691
                |||| |||||| | |||||  ||||||||||||||||||
Sbjct: 15415530 tcaagcttctttgagtcagt-ggagtagggcttcaccca 15415567



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 90/107 (84%), Gaps = 3/107 (2%)
 Strand = Plus / Plus

                                                                            
Query: 326      tgtcattgtgttctcacaagcttgggtgtccacttgtgccatgtaaaccatct---acca 382
                |||||||||||||| ||||| |||||| ||||  | |||||||||||||||||   | | 
Sbjct: 15415200 tgtcattgtgttctgacaagtttgggtctccatctctgccatgtaaaccatctctgatcc 15415259

                                                               
Query: 383      tctccagctttaatatcagcaatcctcctcttcagatcaaggccttt 429
                 |||||||||||||||||||||  || |||||||| ||||| |||||
Sbjct: 15415260 cctccagctttaatatcagcaaatcttctcttcaggtcaagcccttt 15415306



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 47       atttctactccaaaaaggactgcttcagttttgatttt 84
                ||||||||||||||||||||| ||| || |||||||||
Sbjct: 15415006 atttctactccaaaaaggactacttgagctttgatttt 15415043
to top
>ref|XM_851060.1| PREDICTED: Canis familiaris similar to Myosin Ib (Myosin I alpha)
            (MMI-alpha) (MMIa) (MYH-1c), transcript variant 4
            (LOC478846), mRNA
          Length = 3887

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 623  ttcccttcgagccttggatcca 644
            ||||||||||||||||||||||
Sbjct: 2482 ttcccttcgagccttggatcca 2461
to top
>ref|XM_843331.1| PREDICTED: Canis familiaris similar to Myosin Ib (Myosin I alpha)
            (MMI-alpha) (MMIa) (MYH-1c), transcript variant 2
            (LOC478846), mRNA
          Length = 4575

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 623  ttcccttcgagccttggatcca 644
            ||||||||||||||||||||||
Sbjct: 2481 ttcccttcgagccttggatcca 2460
to top
>ref|XM_747710.1| Aspergillus fumigatus Af293 ABC transporter (Afu1g14330) partial mRNA
          Length = 4494

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 514  cttctgcaccatctccagcac 534
            |||||||||||||||||||||
Sbjct: 4317 cttctgcaccatctccagcac 4337
to top
>gb|AC163090.5| Mus musculus chromosome 8, clone RP23-457I3, complete sequence
          Length = 195979

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     agttttgattttccagctctt 93
              |||||||||||||||||||||
Sbjct: 130779 agttttgattttccagctctt 130799
to top
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3
          Length = 227448

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 514    cttctgcaccatctccagcac 534
              |||||||||||||||||||||
Sbjct: 186177 cttctgcaccatctccagcac 186197
to top
>gb|AC008619.7| Homo sapiens chromosome 5 clone CTB-147C13, complete sequence
          Length = 91048

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   gtgatgatagcagtagggctg 197
             |||||||||||||||||||||
Sbjct: 48300 gtgatgatagcagtagggctg 48280
to top
>dbj|AP002852.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1980E6
          Length = 155902

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 651    tctcaaacttcttggtgtcag 671
              |||||||||||||||||||||
Sbjct: 142855 tctcaaacttcttggtgtcag 142835
to top
>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11
          Length = 200610

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 651   tctcaaacttcttggtgtcag 671
             |||||||||||||||||||||
Sbjct: 21288 tctcaaacttcttggtgtcag 21268
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    tttgtttttagttatcacgt 225
              ||||||||||||||||||||
Sbjct: 322769 tttgtttttagttatcacgt 322788
to top
>gb|AY900451.1| Shigella flexneri strain SFL124 O-antigen modification cluster,
            partial sequence
          Length = 7384

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  tttgtttttagttatcacgt 225
            ||||||||||||||||||||
Sbjct: 3763 tttgtttttagttatcacgt 3782
to top
>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete sequence
          Length = 136974

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   tcatgaagaggaacatctca 314
             ||||||||||||||||||||
Sbjct: 24410 tcatgaagaggaacatctca 24429
to top
>ref|NM_004157.2| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
            alpha (PRKAR2A), mRNA
          Length = 2381

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1371 tcatgaagaggaacatctca 1390
to top
>gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, complete sequence
          Length = 188055

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   atattatttagtgatgatagcagt 190
             |||||||||||| |||||||||||
Sbjct: 62841 atattatttagtcatgatagcagt 62818
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      actgcttcagttttgatttt 84
               ||||||||||||||||||||
Sbjct: 1544803 actgcttcagttttgatttt 1544822
to top
>gb|AC005178.1| Homo sapiens chromosome 5, P1 clone 328E3 (LBNL H53), complete sequence
          Length = 84969

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tccaaaaaggactgcttcag 74
             ||||||||||||||||||||
Sbjct: 14953 tccaaaaaggactgcttcag 14934
to top
>ref|XM_658339.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5827.2), mRNA
          Length = 3387

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  aggcaatcttggctgccgac 610
            ||||||||||||||||||||
Sbjct: 2723 aggcaatcttggctgccgac 2742
to top
>ref|XM_838404.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1321)
           partial mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  actgcttcagttttgatttt 84
           ||||||||||||||||||||
Sbjct: 871 actgcttcagttttgatttt 890
to top
>gb|AC122475.2| Mus musculus BAC clone RP24-334J11 from chromosome 7, complete sequence
          Length = 172613

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   catctaccatctccagcttt 393
             ||||||||||||||||||||
Sbjct: 45834 catctaccatctccagcttt 45815
to top
>gb|AE004302.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 210
            of 251 of the complete chromosome
          Length = 11036

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    cgcaaaaacgcaaaatcctg 28
            ||||||||||||||||||||
Sbjct: 8960 cgcaaaaacgcaaaatcctg 8941
to top
>gb|BC002763.2| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
            alpha, mRNA (cDNA clone MGC:3606 IMAGE:3629579), complete
            cds
          Length = 3322

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1296 tcatgaagaggaacatctca 1315
to top
>emb|AL354766.17| Human DNA sequence from clone RP11-323C15 on chromosome 20 Contains an
             RPL13 (ribosomal protein L13) pseudogene, a novel gene,
             the 5' end of the EYA2 gene for eyes absent homolog 2
             (Drosophila) and a CpG island, complete sequence
          Length = 111170

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 54    ctccaaaaaggactgcttcagttttgat 81
             ||||||||||||||||| || |||||||
Sbjct: 36325 ctccaaaaaggactgctgcaattttgat 36352
to top
>gb|AC102705.10| Mus musculus, clone RP24-400C16, complete sequence
          Length = 135473

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  ttttgtgtcattgtgttctc 340
            ||||||||||||||||||||
Sbjct: 3829 ttttgtgtcattgtgttctc 3810
to top
>emb|X14968.1|HSCAMPR2 Human testis mRNA for the RII-alpha subunit of cAMP dependent protein
            kinase
          Length = 1743

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1319 tcatgaagaggaacatctca 1338
to top
>gb|AC141002.8| Homo sapiens 3 BAC RP11-572O6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 138981

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   tcatgaagaggaacatctca 314
             ||||||||||||||||||||
Sbjct: 86394 tcatgaagaggaacatctca 86375
to top
>gb|BT008239.1| Synthetic construct Homo sapiens protein kinase, cAMP-dependent,
            regulatory, type II, alpha mRNA, partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|BT007225.1| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
            alpha mRNA, complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|AF533978.1| Rattus norvegicus cAMP-dependent protein kinase type II-alpha
            regulatory chain mRNA, complete cds
          Length = 1546

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1234 tcatgaagaggaacatctca 1253
to top
>gb|AF533977.1| Mus musculus cAMP-dependent protein kinase type II-alpha regulatory
            chain mRNA, complete cds
          Length = 4051

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1438 tcatgaagaggaacatctca 1457
to top
>gb|AC090662.9| Homo sapiens chromosome 11, clone RP11-184J19, complete sequence
          Length = 177722

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   cacttgtgccatgtaaacca 375
             ||||||||||||||||||||
Sbjct: 94521 cacttgtgccatgtaaacca 94540
to top
>gb|BC075623.1| Mus musculus protein kinase, cAMP dependent regulatory, type II
            alpha, mRNA (cDNA clone MGC:99981 IMAGE:6854057),
            complete cds
          Length = 4011

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1409 tcatgaagaggaacatctca 1428
to top
>gb|AC079361.17| Homo sapiens 11 BAC RP11-184J19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177714

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   cacttgtgccatgtaaacca 375
             ||||||||||||||||||||
Sbjct: 83201 cacttgtgccatgtaaacca 83182
to top
>gb|AC099056.2| Homo sapiens chromosome 3 clone RP11-585O21, complete sequence
          Length = 182405

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   acttcaggctgtagttccct 628
             ||||||||||||||||||||
Sbjct: 13440 acttcaggctgtagttccct 13459
to top
>gb|AC099545.2| Homo sapiens chromosome 3 clone RP11-601G18, complete sequence
          Length = 158485

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 609    acttcaggctgtagttccct 628
              ||||||||||||||||||||
Sbjct: 143245 acttcaggctgtagttccct 143264
to top
>dbj|AK132824.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930427M05 product:protein kinase, cAMP
            dependent regulatory, type II alpha, full insert sequence
          Length = 1529

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1369 tcatgaagaggaacatctca 1388
to top
>dbj|AK132728.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4922503H05 product:protein kinase, cAMP
            dependent regulatory, type II alpha, full insert sequence
          Length = 1647

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1377 tcatgaagaggaacatctca 1396
to top
>dbj|AB169119.1| Macaca fascicularis testis cDNA, clone: QtsA-17357, similar to
           human protein kinase, cAMP-dependent, regulatory, type
           II,alpha (PRKAR2A), mRNA, RefSeq: NM_004157.1
          Length = 1384

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 295 tcatgaagaggaacatctca 314
           ||||||||||||||||||||
Sbjct: 936 tcatgaagaggaacatctca 955
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 372      accatctaccatctccagct 391
                ||||||||||||||||||||
Sbjct: 12090316 accatctaccatctccagct 12090297
to top
>ref|NM_019264.1| Rattus norvegicus protein kinase, cAMP-dependent, regulatory, type 2,
            alpha (Prkar2a), mRNA
          Length = 1546

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1234 tcatgaagaggaacatctca 1253
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    tttgtttttagttatcacgt 225
              ||||||||||||||||||||
Sbjct: 319152 tttgtttttagttatcacgt 319133
to top
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0024C06
          Length = 177529

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    accatctaccatctccagct 391
              ||||||||||||||||||||
Sbjct: 141811 accatctaccatctccagct 141792
to top
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0024C16
          Length = 137779

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   accatctaccatctccagct 391
             ||||||||||||||||||||
Sbjct: 87450 accatctaccatctccagct 87431
to top
>gb|AY892119.1| Synthetic construct Homo sapiens clone FLH026678.01L protein kinase
            cAMP-dependent regulatory type II, alpha (PRKAR2A) mRNA,
            partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|AY892118.1| Synthetic construct Homo sapiens clone FLH026677.01L protein kinase
            cAMP-dependent regulatory type II, alpha (PRKAR2A) mRNA,
            partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|AY889661.1| Synthetic construct Homo sapiens clone FLH026682.01X protein kinase
            cAMP-dependent regulatory type II alpha (PRKAR2A) mRNA,
            complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|AY889660.1| Synthetic construct Homo sapiens clone FLH026681.01X protein kinase
            cAMP-dependent regulatory type II alpha (PRKAR2A) mRNA,
            complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1064 tcatgaagaggaacatctca 1083
to top
>gb|BC080276.1| Mus musculus protein kinase, cAMP dependent regulatory, type II
            alpha, mRNA (cDNA clone MGC:90594 IMAGE:30354403),
            complete cds
          Length = 4047

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1432 tcatgaagaggaacatctca 1451
to top
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    atctccagctttaatatcag 401
              ||||||||||||||||||||
Sbjct: 916192 atctccagctttaatatcag 916173
to top
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    aatcgtttgtttttagttat 220
              ||||||||||||||||||||
Sbjct: 834660 aatcgtttgtttttagttat 834679
to top
>emb|AJ550784.1|PCA550784 Procavia capensis partial hspb3 gene for small heat shock protein
           B3
          Length = 396

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 aagtggcatttcagccgctg 275
           ||||||||||||||||||||
Sbjct: 168 aagtggcatttcagccgctg 149
to top
>gb|AC131117.4| Mus musculus BAC clone RP24-351I18 from 13, complete sequence
          Length = 193056

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   aatcttctgcaccatctcca 530
             ||||||||||||||||||||
Sbjct: 67117 aatcttctgcaccatctcca 67136
to top
>ref|NM_008924.1| Mus musculus protein kinase, cAMP dependent regulatory, type II alpha
            (Prkar2a), mRNA
          Length = 4051

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1438 tcatgaagaggaacatctca 1457
to top
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    aatcgtttgtttttagttat 220
              ||||||||||||||||||||
Sbjct: 761250 aatcgtttgtttttagttat 761269
to top
>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence
          Length = 149387

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    tcatgaagaggaacatctca 314
              ||||||||||||||||||||
Sbjct: 111342 tcatgaagaggaacatctca 111361
to top
>emb|AL844486.12| Mouse DNA sequence from clone RP23-249P4 on chromosome 2, complete
             sequence
          Length = 118787

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   ttttgtgtcattgtgttctc 340
             ||||||||||||||||||||
Sbjct: 54381 ttttgtgtcattgtgttctc 54362
to top
>gb|J02934.1|RATPK2CMP Rat cAMP-dependent protein kinase type II regualatory subunit mRNA,
            3' end
          Length = 1253

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1028 tcatgaagaggaacatctca 1047
to top
>gb|J02935.1|MUSPK2CMP Mouse cAMP-dependent protein kinase type II regulatory subunit mRNA,
            3' end
          Length = 1533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  tcatgaagaggaacatctca 314
            ||||||||||||||||||||
Sbjct: 1121 tcatgaagaggaacatctca 1140


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,516,576
Number of Sequences: 3902068
Number of extensions: 6516576
Number of successful extensions: 122113
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121729
Number of HSP's gapped (non-prelim): 370
length of query: 695
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 672
effective length of database: 17,143,297,704
effective search space: 11520296057088
effective search space used: 11520296057088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top