Clone Name | rbasd13g22 |
---|---|
Clone Library Name | barley_pub |
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 129 bits (325), Expect = 6e-30 Identities = 75/170 (44%), Positives = 108/170 (63%) Frame = -1 Query: 643 FRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFSTGF 464 FRKG E VKE + E T DA N+ ++ NLNAFEIIS STGF Sbjct: 266 FRKGLQEE--VKESV-EEETEVDA------EAEGNASAEKEKKRCINLNAFEIISLSTGF 316 Query: 463 DLSGLFIEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNG 284 DLSGLF + E K+E RFTS + AS I KL ++ K L ++VRKK++ + +V+ Sbjct: 317 DLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEH---EWRVKMSAEAT 373 Query: 283 VLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDIIWAWH 134 V+ ++E+FEI+PSYH++ +K++ GD+ EY+++++E IRPAL D + AWH Sbjct: 374 VV--EAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVLAWH 421
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 102 bits (255), Expect = 7e-22 Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 1/127 (0%) Frame = -1 Query: 508 TNLNAFEIISFSTGFDLSGLF-IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 332 T++NAFE+IS + +L LF +KE K+E RFTS+ P I++K+E+ AK L ++KK Sbjct: 316 TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKK 375 Query: 331 DNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKD 152 N ++M+ K GR G L +E+F+++PS H++E+K+ GD+LE+QK + LKD Sbjct: 376 -NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRT-LSTQLKD 433 Query: 151 IIWAWHG 131 ++W G Sbjct: 434 VVWKCDG 440
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 73.2 bits (178), Expect = 6e-13 Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 5/125 (4%) Frame = -1 Query: 508 TNLNAFEIISFSTGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 332 T +NAF++I S+ DLSG F ++ S++ RFTS A ++ K+E ++ V+KK Sbjct: 316 TIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKK 375 Query: 331 DNGVVKMQVRKEGRNGV----LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRP 164 K++V++E RN L +E+FEI PS +++E++++ GDS Y++L E Sbjct: 376 H---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYER---- 428 Query: 163 ALKDI 149 LKD+ Sbjct: 429 LLKDV 433
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 2/122 (1%) Frame = -1 Query: 502 LNAFEIISFSTGFDLSGLFIEKES--KKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKD 329 +NAFE+I+ S G +LS LF ++ K++ RF S + S I++ +E VA + + + Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTR- 368 Query: 328 NGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 149 N +++ + G L EI+E++PS ++++++ +G++LEY K ++ + L++I Sbjct: 369 NFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKK-LCSKLENI 427 Query: 148 IW 143 IW Sbjct: 428 IW 429
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 62.0 bits (149), Expect = 1e-09 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%) Frame = -1 Query: 514 AVTNLNAFEIISFSTGFDLSGLF--IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRV 341 AV +LNAF++IS+S+G DLSGLF S + RF SE+ + ++E A++ NLR+ Sbjct: 303 AVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRM 362 Query: 340 RKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPA 161 +KK ++ EG+NG I ++ ++E ++ GD Y+++ +R Sbjct: 363 KKKKEEEYGFEM--EGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGKLRVQ 420 Query: 160 L 158 L Sbjct: 421 L 421
>MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)| (ATP-dependent helicase mfd) Length = 1125 Score = 32.3 bits (72), Expect = 1.2 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 6/162 (3%) Frame = -1 Query: 643 FRKGPGENLTVKE----RLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISF 476 ++K PG +TV + ++P++NT + + N+ ++ K L ++ Sbjct: 112 YKKNPGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVTI 171 Query: 475 STGFDLSGLFIEKESKKEARFTSEQPASAIVS--KLEDVAKQLNLRVRKKDNGVVKMQVR 302 F + G I+ F + P ++ K+E++ K L K DN +++ Q+ Sbjct: 172 PGEFTVKGEIIDIYP-----FGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEILEFQIL 226 Query: 301 KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEE 176 + EI I +T S+EY+K+LEE Sbjct: 227 PKK------------EIIWDDKTINTLKTKIKSVEYKKILEE 256
>CI076_HUMAN (Q9H9A7) Protein C9orf76| Length = 625 Score = 31.2 bits (69), Expect = 2.7 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -1 Query: 280 LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDII 146 + F EI + + EMKQ+ D L+YQK L EG++ +D+I Sbjct: 543 VDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFL-EGLQKCQRDLI 586
>DACF_BACSU (P38422) Penicillin-binding protein dacF precursor| (D-alanyl-D-alanine carboxypeptidase) (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) Length = 389 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = -1 Query: 445 IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDS 266 ++K +K T+ +P S + K ED+ + ++ KDN +Q +E VL+ D Sbjct: 297 VKKGKQKFIELTTSEPISILTKKGEDM-NDVKKEIKMKDNISAPIQKGQELGTLVLKKDG 355 Query: 265 EIFEISPSYHLIEMKQ 218 E+ SP +MK+ Sbjct: 356 EVLAESPVAAKEDMKK 371
>NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP)| Length = 788 Score = 30.0 bits (66), Expect = 6.0 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 24/175 (13%) Frame = -1 Query: 628 GENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLN-AFEIISFSTGFDLSG 452 GE E EN T+ +P V K+ E + + NL A++++ DL+ Sbjct: 474 GEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEE-EIGNLELAWDML------DLAK 526 Query: 451 LFIEKESKKEARFTSEQP----------ASAIVSKLEDVAKQLNLR---VRKKDNGVVKM 311 + +++ KEA+ + Q + V +E+ LNL+ + D + + Sbjct: 527 IIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAET 586 Query: 310 QVRKEGRNGV-LQFDSEIFEISPSYHLIE---------MKQTSGDSLEYQKLLEE 176 + G Q+D + + S S +IE +K+ G S EY+K +EE Sbjct: 587 HYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEE 641
>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein) (PPAR-alpha-interacting complex protein 320 kDa) Length = 2885 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -1 Query: 406 EQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIE 227 E SA +SK++ ++ V+ KD G +K+ +K+G FD E + +L Sbjct: 2325 EHEQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTR 2384 Query: 226 MKQTSGDS 203 +++ S Sbjct: 2385 LRELQSTS 2392
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 29.6 bits (65), Expect = 7.9 Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 7/171 (4%) Frame = -1 Query: 640 RKGPGENLTVKERLPNEN----TTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFS 473 +K E+ K+RL +EN DA R K+ + K L T + + Sbjct: 1775 KKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATK 1834 Query: 472 TGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQL--NLRVRKKDNGVVKMQVR 302 T ++ +E + + ++ EQ + K + + NLR + +D G +KM++ Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894 Query: 301 KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 149 KE R + E+ E+ + E + + ++ + ++L+E + A +++ Sbjct: 1895 KEKR----ALEGELEELRETVE--EAEDSKSEAEQSKRLVELELEDARRNL 1939 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,901,971 Number of Sequences: 219361 Number of extensions: 2013501 Number of successful extensions: 5243 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 5086 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5236 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)