ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 129 6e-30
2CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 102 7e-22
3CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 73 6e-13
4CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 68 2e-11
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 62 1e-09
6MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.... 32 1.2
7CI076_HUMAN (Q9H9A7) Protein C9orf76 31 2.7
8DACF_BACSU (P38422) Penicillin-binding protein dacF precursor (D... 31 2.7
9NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP) 30 6.0
10CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ... 30 6.0
11MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ... 30 7.9

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score =  129 bits (325), Expect = 6e-30
 Identities = 75/170 (44%), Positives = 108/170 (63%)
 Frame = -1

Query: 643 FRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFSTGF 464
           FRKG  E   VKE +  E T  DA          N+   ++     NLNAFEIIS STGF
Sbjct: 266 FRKGLQEE--VKESV-EEETEVDA------EAEGNASAEKEKKRCINLNAFEIISLSTGF 316

Query: 463 DLSGLFIEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNG 284
           DLSGLF + E K+E RFTS + AS I  KL ++ K L ++VRKK++   + +V+      
Sbjct: 317 DLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEH---EWRVKMSAEAT 373

Query: 283 VLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDIIWAWH 134
           V+  ++E+FEI+PSYH++ +K++ GD+ EY+++++E IRPAL D + AWH
Sbjct: 374 VV--EAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVLAWH 421



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>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score =  102 bits (255), Expect = 7e-22
 Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = -1

Query: 508 TNLNAFEIISFSTGFDLSGLF-IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 332
           T++NAFE+IS +   +L  LF  +KE K+E RFTS+ P   I++K+E+ AK L   ++KK
Sbjct: 316 TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKK 375

Query: 331 DNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKD 152
            N  ++M+  K GR G L   +E+F+++PS H++E+K+  GD+LE+QK     +   LKD
Sbjct: 376 -NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRT-LSTQLKD 433

Query: 151 IIWAWHG 131
           ++W   G
Sbjct: 434 VVWKCDG 440



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>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
 Frame = -1

Query: 508 TNLNAFEIISFSTGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 332
           T +NAF++I  S+  DLSG F ++  S++  RFTS   A  ++ K+E    ++   V+KK
Sbjct: 316 TIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKK 375

Query: 331 DNGVVKMQVRKEGRNGV----LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRP 164
                K++V++E RN      L   +E+FEI PS +++E++++ GDS  Y++L E     
Sbjct: 376 H---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYER---- 428

Query: 163 ALKDI 149
            LKD+
Sbjct: 429 LLKDV 433



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>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
 Frame = -1

Query: 502 LNAFEIISFSTGFDLSGLFIEKES--KKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKD 329
           +NAFE+I+ S G +LS LF  ++   K++ RF S +  S I++ +E VA  +  +   + 
Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTR- 368

Query: 328 NGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 149
           N   +++     + G L    EI+E++PS  ++++++ +G++LEY K  ++ +   L++I
Sbjct: 369 NFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKK-LCSKLENI 427

Query: 148 IW 143
           IW
Sbjct: 428 IW 429



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>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = -1

Query: 514 AVTNLNAFEIISFSTGFDLSGLF--IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRV 341
           AV +LNAF++IS+S+G DLSGLF      S +  RF SE+    +  ++E  A++ NLR+
Sbjct: 303 AVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRM 362

Query: 340 RKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPA 161
           +KK       ++  EG+NG       I  ++    ++E ++  GD   Y+++    +R  
Sbjct: 363 KKKKEEEYGFEM--EGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGKLRVQ 420

Query: 160 L 158
           L
Sbjct: 421 L 421



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>MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)|
           (ATP-dependent helicase mfd)
          Length = 1125

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 6/162 (3%)
 Frame = -1

Query: 643 FRKGPGENLTVKE----RLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISF 476
           ++K PG  +TV +    ++P++NT    +  +      N+ ++ K L          ++ 
Sbjct: 112 YKKNPGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVTI 171

Query: 475 STGFDLSGLFIEKESKKEARFTSEQPASAIVS--KLEDVAKQLNLRVRKKDNGVVKMQVR 302
              F + G  I+        F  + P    ++  K+E++ K   L   K DN +++ Q+ 
Sbjct: 172 PGEFTVKGEIIDIYP-----FGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEILEFQIL 226

Query: 301 KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEE 176
            +             EI      I   +T   S+EY+K+LEE
Sbjct: 227 PKK------------EIIWDDKTINTLKTKIKSVEYKKILEE 256



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>CI076_HUMAN (Q9H9A7) Protein C9orf76|
          Length = 625

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 280 LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDII 146
           + F  EI      + + EMKQ+  D L+YQK L EG++   +D+I
Sbjct: 543 VDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFL-EGLQKCQRDLI 586



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>DACF_BACSU (P38422) Penicillin-binding protein dacF precursor|
           (D-alanyl-D-alanine carboxypeptidase) (EC 3.4.16.4)
           (DD-peptidase) (DD-carboxypeptidase)
          Length = 389

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = -1

Query: 445 IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDS 266
           ++K  +K    T+ +P S +  K ED+   +   ++ KDN    +Q  +E    VL+ D 
Sbjct: 297 VKKGKQKFIELTTSEPISILTKKGEDM-NDVKKEIKMKDNISAPIQKGQELGTLVLKKDG 355

Query: 265 EIFEISPSYHLIEMKQ 218
           E+   SP     +MK+
Sbjct: 356 EVLAESPVAAKEDMKK 371



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>NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP)|
          Length = 788

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
 Frame = -1

Query: 628 GENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLN-AFEIISFSTGFDLSG 452
           GE     E    EN  T+ +P   V   K+  E  +   + NL  A++++      DL+ 
Sbjct: 474 GEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEE-EIGNLELAWDML------DLAK 526

Query: 451 LFIEKESKKEARFTSEQP----------ASAIVSKLEDVAKQLNLR---VRKKDNGVVKM 311
           +  +++  KEA+  + Q           +   V  +E+    LNL+   +   D  + + 
Sbjct: 527 IIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAET 586

Query: 310 QVRKEGRNGV-LQFDSEIFEISPSYHLIE---------MKQTSGDSLEYQKLLEE 176
             +     G   Q+D  + + S S  +IE         +K+  G S EY+K +EE
Sbjct: 587 HYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEE 641



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>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -1

Query: 406  EQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIE 227
            E   SA +SK++   ++    V+ KD G +K+  +K+G      FD E   +    +L  
Sbjct: 2325 EHEQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTR 2384

Query: 226  MKQTSGDS 203
            +++    S
Sbjct: 2385 LRELQSTS 2392



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>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 7/171 (4%)
 Frame = -1

Query: 640  RKGPGENLTVKERLPNEN----TTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFS 473
            +K   E+   K+RL +EN       DA      R  K+  +  K L  T     +  +  
Sbjct: 1775 KKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATK 1834

Query: 472  TGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQL--NLRVRKKDNGVVKMQVR 302
            T  ++    +E +  +  ++   EQ  +    K +   +    NLR + +D G +KM++ 
Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894

Query: 301  KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 149
            KE R      + E+ E+  +    E + +  ++ + ++L+E  +  A +++
Sbjct: 1895 KEKR----ALEGELEELRETVE--EAEDSKSEAEQSKRLVELELEDARRNL 1939


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,901,971
Number of Sequences: 219361
Number of extensions: 2013501
Number of successful extensions: 5243
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5236
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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