>ENV_EIAVC (P32541) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Coat protein GP90; Coat protein GP45]
          Length = 859

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
 Frame = -3

Query: 590 SANEKAEENTMLQNVDPVTDSSNVVASGEESKPDGSGAP--------RNVWWQKQLISLY 435
           S   K EENTM Q      DS N +A  +E++               RN WW+K +  L 
Sbjct: 22  SEKSKCEENTMFQPYCYNNDSKNSMAESKEARDQEMNLKEESKEEKRRNDWWKKGMFLLC 81

Query: 434 RSAKESNKLW 405
            +      LW
Sbjct: 82  LAGTTGGILW 91

>HXB3A_BRARE (O42368) Homeobox protein Hox-B3a (Hox-B3)|
          Length = 417

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 581 EKAEENTMLQNVDPVTDSSNVVASGEESKPDGSGA---PRNVWWQKQLISL 438
           +++ +NT  +N  P   S+N  +SG E  P GS A    R  +   QL+ L
Sbjct: 145 KESRQNTKQKNSSPSASSANAESSGGEKSPPGSAASKRARTAYTSAQLVEL 195

>HEMH_CHLMU (Q9PJQ6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme|
           synthetase)
          Length = 317

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 535 LTRPMLLLLAKRASLTVLEPHATCGGRSNLYRCTGALRRATS 410
           L RP+   +AKR +  V E +A  GGRS +++ T  L +  S
Sbjct: 40  LHRPLFSYIAKRRAHRVAEQYAYLGGRSPIFQDTEKLAQNLS 81

>COG5_YEAST (P53951) Conserved oligomeric Golgi complex component 5 (Complexed|
           with DOR1 protein 4)
          Length = 403

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 21/68 (30%)
 Frame = -3

Query: 593 DSANEKAEEN-------TMLQNV--DPVTDSSNVVASGEE------------SKPDGSGA 477
           D+ NE  E+        T+LQN+  D VT+SS  +A+ +                 GSG 
Sbjct: 272 DAFNEVVEKGYNIYILETLLQNIKTDNVTNSSRSIAANKSRLGNLLSEYTSMKSKAGSGT 331

Query: 476 PRNVWWQK 453
           PR+++W K
Sbjct: 332 PRDLFWSK 339


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,546,671
Number of Sequences: 219361
Number of extensions: 1792906
Number of successful extensions: 5254
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5254
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)