>gb|BC077235.1| Xenopus laevis Ras-like without CAAX 1, mRNA (cDNA clone MGC:79097
            IMAGE:5048225), complete cds
          Length = 1960

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 270  gatggagaagaacataaacctg 291
            ||||||||||||||||||||||
Sbjct: 1065 gatggagaagaacataaacctg 1086

>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence
          Length = 158391

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    aattcaattgagaaaagcaaa 60
             |||||||||||||||||||||
Sbjct: 25137 aattcaattgagaaaagcaaa 25117

>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete
             sequence
          Length = 127331

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   gatgaagatggagaagaacat 284
             |||||||||||||||||||||
Sbjct: 39896 gatgaagatggagaagaacat 39876

>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence
          Length = 192734

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     aattcaattgagaaaagcaaa 60
              |||||||||||||||||||||
Sbjct: 164375 aattcaattgagaaaagcaaa 164355

>dbj|AB083481.1| Mesembryanthemum crystallinum MPC7 mRNA for protein phosphatase 2C,
           complete cds
          Length = 1769

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  aatgctaacttgaattcaatt 48
           |||||||||||||||||||||
Sbjct: 235 aatgctaacttgaattcaatt 215

>ref|XM_642546.1| Dictyostelium discoideum hypothetical protein (DDB0216593), partial
           mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gatgaagatggagaagaaca 283
           ||||||||||||||||||||
Sbjct: 614 gatgaagatggagaagaaca 595

>gb|AF165141.4| Homo sapiens chromosome 8 clone XX-224L15 map 8q21.13, complete
             sequence
          Length = 46919

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tggatgaagatggagaagaa 281
             ||||||||||||||||||||
Sbjct: 40300 tggatgaagatggagaagaa 40281

>gb|AC084697.4| Homo sapiens chromosome 8 clone XX-6L9 map q21.13, complete sequence
          Length = 107517

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tggatgaagatggagaagaa 281
             ||||||||||||||||||||
Sbjct: 65371 tggatgaagatggagaagaa 65352

>gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome 14, complete sequence
          Length = 236917

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ttggatgaagatggagaagaacat 284
             ||||| ||||||||||||||||||
Sbjct: 90952 ttggaagaagatggagaagaacat 90975

>gb|AC090255.4| Homo sapiens chromosome 8, clone RP11-34M16, complete sequence
          Length = 145705

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tggatgaagatggagaagaa 281
             ||||||||||||||||||||
Sbjct: 51977 tggatgaagatggagaagaa 51958

>emb|BX649352.15| Zebrafish DNA sequence from clone DKEY-196J7 in linkage group 1,
             complete sequence
          Length = 226763

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   taaaaagttgattttgatga 221
             ||||||||||||||||||||
Sbjct: 43760 taaaaagttgattttgatga 43741

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 250     gccaaggcacattggatgaa 269
               ||||||||||||||||||||
Sbjct: 2376880 gccaaggcacattggatgaa 2376861



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    gccaaggcacattggatgaa 269
              ||||||||||||||||||||
Sbjct: 675521 gccaaggcacattggatgaa 675540

>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete
             sequence
          Length = 195224

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 261   ttggatgaagatggagaagaacat 284
             ||||| ||||||||||||||||||
Sbjct: 32367 ttggaagaagatggagaagaacat 32344

>gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-713P14, complete sequence
          Length = 183659

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gagaaaagcaaacatacata 68
             ||||||||||||||||||||
Sbjct: 83976 gagaaaagcaaacatacata 83995

>ref|NM_075285.2| Caenorhabditis elegans Nuclear Hormone Receptor family member
           (nhr-243) (nhr-243) mRNA, complete cds
          Length = 1275

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 tggatgaagatggagaagaa 281
           ||||||||||||||||||||
Sbjct: 37  tggatgaagatggagaagaa 18

>gb|AC073879.7| Homo sapiens BAC clone RP11-752K22 from 2, complete sequence
          Length = 188181

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    aaaaagttgattttgatgac 222
              ||||||||||||||||||||
Sbjct: 175587 aaaaagttgattttgatgac 175606

>gb|AC019105.7| Homo sapiens BAC clone RP11-475A8 from 2, complete sequence
          Length = 170491

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   gtagccaaggcacattggatgaag 270
             |||||||||||||||||| |||||
Sbjct: 75735 gtagccaaggcacattggctgaag 75712

>gb|AC108929.4| Homo sapiens BAC clone RP11-73N8 from 2, complete sequence
          Length = 112211

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   aaaaagttgattttgatgac 222
             ||||||||||||||||||||
Sbjct: 86374 aaaaagttgattttgatgac 86393

>gb|AC010000.5|AC010000 Homo sapiens chromosome 8 clone RP11-34M16, complete sequence
          Length = 145588

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tggatgaagatggagaagaa 281
             ||||||||||||||||||||
Sbjct: 51861 tggatgaagatggagaagaa 51842

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 250     gccaaggcacattggatgaa 269
               ||||||||||||||||||||
Sbjct: 1303334 gccaaggcacattggatgaa 1303315



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    gccaaggcacattggatgaa 269
              ||||||||||||||||||||
Sbjct: 463558 gccaaggcacattggatgaa 463539

>emb|AL132853.2|CEY80D3A Caenorhabditis elegans YAC Y80D3A, complete sequence
          Length = 102495

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   tggatgaagatggagaagaa 281
             ||||||||||||||||||||
Sbjct: 44810 tggatgaagatggagaagaa 44829


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,912,543
Number of Sequences: 3902068
Number of extensions: 2912543
Number of successful extensions: 62353
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62304
Number of HSP's gapped (non-prelim): 49
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)