Clone Name | rbasd13g10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_483801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 Score = 569 bits (287), Expect = e-159 Identities = 485/551 (88%) Strand = Plus / Minus Query: 132 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 191 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2907 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2848 Query: 192 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 251 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2847 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2788 Query: 252 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 311 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2787 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2728 Query: 312 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 371 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2727 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2668 Query: 372 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 431 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2667 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2608 Query: 432 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 491 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2607 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 2548 Query: 492 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 551 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 2547 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 2488 Query: 552 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 611 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 2487 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 2428 Query: 612 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 671 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 2427 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 2368 Query: 672 gggatgcaaga 682 | ||||||||| Sbjct: 2367 gagatgcaaga 2357
>dbj|AK066773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081C24, full insert sequence Length = 2519 Score = 569 bits (287), Expect = e-159 Identities = 485/551 (88%) Strand = Plus / Minus Query: 132 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 191 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2325 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2266 Query: 192 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 251 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2265 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2206 Query: 252 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 311 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2205 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2146 Query: 312 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 371 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2145 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2086 Query: 372 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 431 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2085 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2026 Query: 432 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 491 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2025 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 1966 Query: 492 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 551 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1965 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 1906 Query: 552 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 611 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 1905 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 1846 Query: 612 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 671 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 1845 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 1786 Query: 672 gggatgcaaga 682 | ||||||||| Sbjct: 1785 gagatgcaaga 1775
>dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L14, full insert sequence Length = 3181 Score = 569 bits (287), Expect = e-159 Identities = 485/551 (88%) Strand = Plus / Minus Query: 132 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 191 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 2943 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 2884 Query: 192 taatcatctccaactgggccttagcaagagcttgtctcgtctcgtcatatctcctccatc 251 |||||||||| ||| |||||||||||||||||||| |||| ||||||| |||||| | Sbjct: 2883 cgatcatctccagctgagccttagcaagagcttgtctgctctcatcatatcgcctccacc 2824 Query: 252 gagagaatgctgacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaa 311 ||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 2823 gagagaaagctgacaccatgcgggaggccacctgaggatttatcttgtctagctgtaaaa 2764 Query: 312 caacttcacccaagaacttgtaaccagaaccatctttcgcgtgaaaactcacaggtgacc 371 |||||||||||||||||||||||||||| |||||||| || || ||| ||||||| |||| Sbjct: 2763 caacttcacccaagaacttgtaaccagagccatcttttgcatggaaattcacaggggacc 2704 Query: 372 cacaaaagcctccaattaaagagtataccttgttcggattccgcatgtcaaaagcaggat 431 ||||||| |||||||||| || || |||||||||||||||| ||||||||||||||| | Sbjct: 2703 cacaaaatcctccaattagcgaatacaccttgttcggattcctcatgtcaaaagcagggt 2644 Query: 432 gagccagtaacttccgaacattggctacatttccaggaatgtccgaggtagcttgaagag 491 || | |||||||| |||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 2643 gaccaagtaacttttgaacgttagcaacatttccagggatgtctgatgtagcttgaagag 2584 Query: 492 caaaccacttgcttacaaccaaataatcttgctgccatttgttatagaagtccaaaaggg 551 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 2583 caaaccacttgcttacaaccaaataatcatgctgccatttgttatagaagtccagaaggg 2524 Query: 552 catcctcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcgg 611 || ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 2523 tgtcatcacgaacttggcctggattttgagacaatgctgctagtgcagcaaactgctccg 2464 Query: 612 tcatgttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattca 671 |||||||||||||||||||||| ||| ||||||||||||||| || || ||||||| Sbjct: 2463 tcatgttagtagcagacttgtattcaacaaatgcaagttcagtggtgtccggttcattca 2404 Query: 672 gggatgcaaga 682 | ||||||||| Sbjct: 2403 gagatgcaaga 2393
>gb|AY105426.1| Zea mays PCO146438 mRNA sequence Length = 3165 Score = 454 bits (229), Expect = e-124 Identities = 436/505 (86%) Strand = Plus / Minus Query: 167 ttttcagagagtccattggctgagataatcatctccaactgggccttagcaagagcttgt 226 ||||| ||||| |||||||| || | |||||||||| |||||||||||||||||||||| Sbjct: 2981 ttttcggagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgt 2922 Query: 227 ctcgtctcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctga 286 || |||| ||| || | |||||| ||||| |||||||| ||||||||||| ||||||||| Sbjct: 2921 ctggtcttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctga 2862 Query: 287 ggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatct 346 || ||||| ||||| ||||| ||||| | ||||||||||||||||| |||||||||||| Sbjct: 2861 gggtttatcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatct 2802 Query: 347 ttcgcgtgaaaactcacaggtgacccacaaaagcctccaattaaagagtataccttgttc 406 |||||||| || |||||||||| ||||| || || || |||| ||||| |||||||| Sbjct: 2801 ttcgcgtggaagttcacaggtgagccacagaatcccccgattagtgagtacaccttgttg 2742 Query: 407 ggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattggctacatttcca 466 ||||||| || ||| |||||||| |||| ||| | |||| ||||||| || ||||||||| Sbjct: 2741 ggattcctcaggtcgaaagcagggtgagacagcagcttctgaacatttgcaacatttcca 2682 Query: 467 ggaatgtccgaggtagcttgaagagcaaaccacttgcttacaaccaaataatcttgctgc 526 ||||| || || ||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 2681 ggaatctctgaagtagcttgaagagcaaaccacttgcttacaaccaagtattcatgctgc 2622 Query: 527 catttgttatagaagtccaaaagggcatcctcacggacttgacctggattttgagacaat 586 || ||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||| Sbjct: 2621 cacttgttatagaaatccaagagggcatcatcacgaacttggcctggattttgggataat 2562 Query: 587 gctgctaatgcagcaaactgctcggtcatgttagtagcagacttgtactcatttaatgca 646 ||||||||||||||||||||||| ||||||||||| |||||||||||||||| | |||| Sbjct: 2561 gctgctaatgcagcaaactgctctgtcatgttagtcgcagacttgtactcatgcagtgca 2502 Query: 647 agttcagtgacatctggctcattca 671 || ||| || |||||||||||||| Sbjct: 2501 agctcaacgaaatctggctcattca 2477
>gb|BT024073.1| Zea mays clone EL01N0507C07 mRNA sequence Length = 2068 Score = 450 bits (227), Expect = e-123 Identities = 431/499 (86%) Strand = Plus / Minus Query: 173 gagagtccattggctgagataatcatctccaactgggccttagcaagagcttgtctcgtc 232 ||||| |||||||| || | |||||||||| |||||||||||||||||||||||| ||| Sbjct: 1849 gagagcccattggccgacacgatcatctccagctgggccttagcaagagcttgtctggtc 1790 Query: 233 tcgtcatatctcctccatcgagagaatgctgacaccatgcgggatgccacctgaggattt 292 | ||| || | |||||| ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 1789 ttgtcgtaccgcctccaccgagaaaatgctgaaaccatgcgggaggccacctgagggttt 1730 Query: 293 attttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaaccatctttcgcg 352 || ||||| ||||| ||||| | ||||||||||||||||| |||||||||||||||||| Sbjct: 1729 atcttgtcaagctgcaaaacgatctcacccaagaacttgtacccagaaccatctttcgcg 1670 Query: 353 tgaaaactcacaggtgacccacaaaagcctccaattaaagagtataccttgttcggattc 412 || || |||||||||| ||||| || || || |||| ||||| |||||||| |||||| Sbjct: 1669 tggaagttcacaggtgagccacagaatcccccgattagtgagtacaccttgttgggattc 1610 Query: 413 cgcatgtcaaaagcaggatgagccagtaacttccgaacattggctacatttccaggaatg 472 | || ||| |||||||| |||| ||| | |||| ||||||| || |||||||||||||| Sbjct: 1609 ctcaggtcgaaagcagggtgagacagcagcttctgaacatttgcaacatttccaggaatc 1550 Query: 473 tccgaggtagcttgaagagcaaaccacttgcttacaaccaaataatcttgctgccatttg 532 || || ||||||||||||||||||||||||||||||||||| || || |||||||| ||| Sbjct: 1549 tctgaagtagcttgaagagcaaaccacttgcttacaaccaagtattcatgctgccacttg 1490 Query: 533 ttatagaagtccaaaagggcatcctcacggacttgacctggattttgagacaatgctgct 592 |||||||| ||||| |||||||| ||||| ||||| ||||||||||| || ||||||||| Sbjct: 1489 ttatagaaatccaagagggcatcatcacgaacttggcctggattttgggataatgctgct 1430 Query: 593 aatgcagcaaactgctcggtcatgttagtagcagacttgtactcatttaatgcaagttca 652 ||||||||||||||||| ||||||||||| |||||||||||||||| | |||||| ||| Sbjct: 1429 aatgcagcaaactgctctgtcatgttagtcgcagacttgtactcatgcagtgcaagctca 1370 Query: 653 gtgacatctggctcattca 671 || |||||||||||||| Sbjct: 1369 acgaaatctggctcattca 1351
>emb|AJ234438.1|HVU234438 Hordeum vulgare partial mRNA; clone cMWG0721 Length = 376 Score = 250 bits (126), Expect = 5e-63 Identities = 126/126 (100%) Strand = Plus / Plus Query: 557 tcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcggtcatg 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 tcacggacttgacctggattttgagacaatgctgctaatgcagcaaactgctcggtcatg 83 Query: 617 ttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattcagggat 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 ttagtagcagacttgtactcatttaatgcaagttcagtgacatctggctcattcagggat 143 Query: 677 gcaaga 682 |||||| Sbjct: 144 gcaaga 149 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 538 gaagtccaaaagggcatcctcac 560 ||||||||||||||||||||||| Sbjct: 25 gaagtccaaaagggcatcctcac 3
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 194 bits (98), Expect = 3e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 509 accaaataatcttgctgccatttgttatagaagtccaaaagggcatcctcacggacttga 568 ||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 28167075 accaaataatcatgctgccatttgttatagaagtccagaagggtgtcatcacgaacttgg 28167134 Query: 569 cctggattttgagacaatgctgctaatgcagcaaactgctcggtcatgttagtagcagac 628 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 28167135 cctggattttgagacaatgctgctagtgcagcaaactgctccgtcatgttagtagcagac 28167194 Query: 629 ttgtactcatttaatgcaagttcagtgacatctggctcattcagggatgcaaga 682 ||||| ||| ||||||||||||||| || || |||||||| ||||||||| Sbjct: 28167195 ttgtattcaacaaatgcaagttcagtggtgtccggttcattcagagatgcaaga 28167248 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 281 acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 340 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28166653 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 28166712 Query: 341 ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 389 |||||||| || || ||| ||||||| ||||||||||| |||||||||| Sbjct: 28166713 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 28166761 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 396 ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 455 |||||||||||||||||| ||||||||||||||| ||| | |||||||| |||| || | Sbjct: 28166842 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 28166901 Query: 456 ctacatttccaggaatgtccgaggtagcttgaagagcaaaccacttgcttacaacc 511 | ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 28166902 caacatttccagggatgtctgatgtagcttgaagagcaaaccacttgcttacaacc 28166957 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 210 ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 269 ||||||||||||||||||| |||| ||||||| |||||| |||||||| |||||||||| Sbjct: 28166495 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 28166554 Query: 270 tgcgggatgccacct 284 ||||||| ||||||| Sbjct: 28166555 tgcgggaggccacct 28166569 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 132 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 191 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 28166340 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 28166399 Query: 192 taatcatctccaactgggcct 212 |||||||||| ||| |||| Sbjct: 28166400 cgatcatctccagctgagcct 28166420
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 194 bits (98), Expect = 3e-46 Identities = 155/174 (89%) Strand = Plus / Plus Query: 509 accaaataatcttgctgccatttgttatagaagtccaaaagggcatcctcacggacttga 568 ||||||||||| ||||||||||||||||||||||||| ||||| || ||||| ||||| Sbjct: 50548 accaaataatcatgctgccatttgttatagaagtccagaagggtgtcatcacgaacttgg 50607 Query: 569 cctggattttgagacaatgctgctaatgcagcaaactgctcggtcatgttagtagcagac 628 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 50608 cctggattttgagacaatgctgctagtgcagcaaactgctccgtcatgttagtagcagac 50667 Query: 629 ttgtactcatttaatgcaagttcagtgacatctggctcattcagggatgcaaga 682 ||||| ||| ||||||||||||||| || || |||||||| ||||||||| Sbjct: 50668 ttgtattcaacaaatgcaagttcagtggtgtccggttcattcagagatgcaaga 50721 Score = 145 bits (73), Expect = 2e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 281 acctgaggatttattttgtcgagctgtaaaacaacttcacccaagaacttgtaaccagaa 340 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 50126 acctgaggatttatcttgtctagctgtaaaacaacttcacccaagaacttgtaaccagag 50185 Query: 341 ccatctttcgcgtgaaaactcacaggtgacccacaaaagcctccaatta 389 |||||||| || || ||| ||||||| ||||||||||| |||||||||| Sbjct: 50186 ccatcttttgcatggaaattcacaggggacccacaaaatcctccaatta 50234 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 396 ataccttgttcggattccgcatgtcaaaagcaggatgagccagtaacttccgaacattgg 455 |||||||||||||||||| ||||||||||||||| ||| | |||||||| |||| || | Sbjct: 50315 ataccttgttcggattcctcatgtcaaaagcagggtgaccaagtaacttttgaacgttag 50374 Query: 456 ctacatttccaggaatgtccgaggtagcttgaagagcaaaccacttgcttacaacc 511 | ||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 50375 caacatttccagggatgtctgatgtagcttgaagagcaaaccacttgcttacaacc 50430 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 210 ccttagcaagagcttgtctcgtctcgtcatatctcctccatcgagagaatgctgacacca 269 ||||||||||||||||||| |||| ||||||| |||||| |||||||| |||||||||| Sbjct: 49968 ccttagcaagagcttgtctgctctcatcatatcgcctccaccgagagaaagctgacacca 50027 Query: 270 tgcgggatgccacct 284 ||||||| ||||||| Sbjct: 50028 tgcgggaggccacct 50042 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 132 aagctgccagacttttcgaggctatctcatagacattttcagagagtccattggctgaga 191 |||||||||| || || || |||||||| || ||||| || || || ||||||||||| | Sbjct: 49813 aagctgccaggctctttgaagctatctcgtacacattctctgatagcccattggctgaca 49872 Query: 192 taatcatctccaactgggcct 212 |||||||||| ||| |||| Sbjct: 49873 cgatcatctccagctgagcct 49893
>ref|NM_105053.3| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770 transcript variant AT1G63770.1 mRNA, complete cds Length = 3229 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 263 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 322 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2811 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2752 Query: 323 aagaacttgtaaccagaaccatc 345 |||||||||||||| || ||||| Sbjct: 2751 aagaacttgtaacctgatccatc 2729 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 acaaccaaataatcttgctgccatttgttatagaagtc 543 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2564 acaaccaagtaatcgtcctgccacttgttatagaagtc 2527
>gb|BT010361.1| Arabidopsis thaliana At1g63770 mRNA, complete cds Length = 2652 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 263 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 322 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2519 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2460 Query: 323 aagaacttgtaaccagaaccatc 345 |||||||||||||| || ||||| Sbjct: 2459 aagaacttgtaacctgatccatc 2437 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 acaaccaaataatcttgctgccatttgttatagaagtc 543 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2276 acaaccaagtaatcgtcctgccacttgttatagaagtc 2239
>gb|AY960336.1| Arabidopsis thaliana M1 aminopeptidase mRNA, complete cds, alternatively spliced Length = 3051 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 263 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 322 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2747 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2688 Query: 323 aagaacttgtaaccagaaccatc 345 |||||||||||||| || ||||| Sbjct: 2687 aagaacttgtaacctgatccatc 2665 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 acaaccaaataatcttgctgccatttgttatagaagtc 543 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2504 acaaccaagtaatcgtcctgccacttgttatagaagtc 2467
>gb|BT002074.1| Arabidopsis thaliana putative aminopeptidase (At1g63770) mRNA, complete cds Length = 3056 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 263 gacaccatgcgggatgccacctgaggatttattttgtcgagctgtaaaacaacttcaccc 322 |||||||| || || || |||||||| || | |||||| | ||| | ||||| |||||| Sbjct: 2749 gacaccatacgagaagcaacctgagggttcaatttgtctaactggacaacaatgtcaccc 2690 Query: 323 aagaacttgtaaccagaaccatc 345 |||||||||||||| || ||||| Sbjct: 2689 aagaacttgtaacctgatccatc 2667 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 acaaccaaataatcttgctgccatttgttatagaagtc 543 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2506 acaaccaagtaatcgtcctgccacttgttatagaagtc 2469
>ref|NM_202354.1| Arabidopsis thaliana membrane alanyl aminopeptidase AT1G63770 transcript variant AT1G63770.2 mRNA, complete cds Length = 3331 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 506 acaaccaaataatcttgctgccatttgttatagaagtc 543 |||||||| ||||| | |||||| |||||||||||||| Sbjct: 2564 acaaccaagtaatcgtcctgccacttgttatagaagtc 2527 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 tcacccaagaacttgtaaccagaaccatc 345 |||||||||||||||||||| || ||||| Sbjct: 2753 tcacccaagaacttgtaacctgatccatc 2725
>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3, complete sequence Length = 94749 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 328 cttgtaaccagaaccatctttc 349 |||||||||||||||||||||| Sbjct: 49323 cttgtaaccagaaccatctttc 49302
>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191886 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 637 atttaatgcaagttcagtgac 657 ||||||||||||||||||||| Sbjct: 116620 atttaatgcaagttcagtgac 116640
>gb|AC095014.1| Drosophila melanogaster, chromosome 3R, region 83F-84A, BAC clone BACR19D23, complete sequence Length = 170801 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gaagagcaaaccacttgctta 506 ||||||||||||||||||||| Sbjct: 43001 gaagagcaaaccacttgctta 42981
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gaagagcaaaccacttgctta 506 ||||||||||||||||||||| Sbjct: 174694 gaagagcaaaccacttgctta 174674
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 gaagagcaaaccacttgctta 506 ||||||||||||||||||||| Sbjct: 347769 gaagagcaaaccacttgctta 347789
>emb|BX817670.1|CNS0AE3V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 654 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 tcacccaagaacttgtaaccagaaccatc 345 |||||||||||||||||||| || ||||| Sbjct: 187 tcacccaagaacttgtaacctgatccatc 159
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence, complete sequence Length = 87575 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 317 tcacccaagaacttgtaaccagaaccatc 345 |||||||||||||||||||| || ||||| Sbjct: 10530 tcacccaagaacttgtaacctgatccatc 10502
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 512 aaataatcttgctgccatttg 532 ||||||||||||||||||||| Sbjct: 4832963 aaataatcttgctgccatttg 4832983
>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the complete sequence Length = 298020 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gaagagcaaaccacttgctta 506 ||||||||||||||||||||| Sbjct: 228838 gaagagcaaaccacttgctta 228818
>gb|AC001652.1|AC001652 Drosophila melanogaster DNA sequence (P1 DS00004 (D12)), complete sequence Length = 85757 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 gaagagcaaaccacttgctta 506 ||||||||||||||||||||| Sbjct: 82057 gaagagcaaaccacttgctta 82037
>ref|XM_715357.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_2697), mRNA Length = 5697 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 aggatttattttgtcgagct 305 |||||||||||||||||||| Sbjct: 1094 aggatttattttgtcgagct 1113
>ref|XM_715127.1| Candida albicans SC5314 ubiquitin-protein ligase (CaO19_10212), mRNA Length = 5697 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 aggatttattttgtcgagct 305 |||||||||||||||||||| Sbjct: 1094 aggatttattttgtcgagct 1113
>ref|XM_451080.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01826g predicted mRNA Length = 4395 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 644 gcaagttcagtgacatctgg 663 |||||||||||||||||||| Sbjct: 1924 gcaagttcagtgacatctgg 1943
>gb|AC005047.3| Homo sapiens BAC clone CTB-14E15 from 7, complete sequence Length = 154016 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 attttgagacaatgctgcta 593 |||||||||||||||||||| Sbjct: 102695 attttgagacaatgctgcta 102676
>gb|AC005550.1| Homo sapiens PAC clone RP4-620P6 from 7, complete sequence Length = 133237 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 ttgctgccatttgttatagaagtc 543 |||||| ||||||||||||||||| Sbjct: 82498 ttgctgtcatttgttatagaagtc 82475
>gb|AC147099.2| Pan troglodytes BAC clone RP43-50K9 from 7, complete sequence Length = 170612 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 574 attttgagacaatgctgcta 593 |||||||||||||||||||| Sbjct: 60549 attttgagacaatgctgcta 60530
>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5, complete sequence Length = 182066 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tggcagaatcaaatttgttt 114 |||||||||||||||||||| Sbjct: 9480 tggcagaatcaaatttgttt 9461
>emb|AL034551.17|HS606P22 Human DNA sequence from clone RP4-606P22 on chromosome 20p12 Contains part of the PLCB1 gene for phospholipase C beta 1 (phosphoinositide-specific), complete sequence Length = 137723 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 atttgttatagaagtccaaa 547 |||||||||||||||||||| Sbjct: 112818 atttgttatagaagtccaaa 112799
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 644 gcaagttcagtgacatctgg 663 |||||||||||||||||||| Sbjct: 165481 gcaagttcagtgacatctgg 165462
>gb|AC020992.10| Homo sapiens chromosome 8, clone RP11-23H1, complete sequence Length = 129413 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 637 atttaatgcaagttcagtga 656 |||||||||||||||||||| Sbjct: 104896 atttaatgcaagttcagtga 104877
>gb|AC008715.6| Homo sapiens chromosome 5 clone CTB-84H3, complete sequence Length = 121737 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 taaatacagcagaatatatt 48 |||||||||||||||||||| Sbjct: 89696 taaatacagcagaatatatt 89677
>gb|AC137770.3| Homo sapiens chromosome 5 clone CTC-806A22, complete sequence Length = 156582 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 taaatacagcagaatatatt 48 |||||||||||||||||||| Sbjct: 45601 taaatacagcagaatatatt 45620
>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence Length = 43180 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 ctaaatacagcagaatatattcagttaa 55 |||||| |||||||||||||||| |||| Sbjct: 28764 ctaaatgcagcagaatatattcatttaa 28737
>emb|AL079352.3|CNS00M8V Human chromosome 14 DNA sequence BAC R-388G3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176833 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 agacattttcagagagtcca 181 |||||||||||||||||||| Sbjct: 33908 agacattttcagagagtcca 33927
>emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chromosome 4, complete sequence Length = 211131 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 cttgcttacaaccaaataat 518 |||||||||||||||||||| Sbjct: 105332 cttgcttacaaccaaataat 105351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,142,973 Number of Sequences: 3902068 Number of extensions: 6142973 Number of successful extensions: 126040 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125899 Number of HSP's gapped (non-prelim): 141 length of query: 682 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 659 effective length of database: 17,143,297,704 effective search space: 11297433186936 effective search space used: 11297433186936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)