Clone Information

BLAST Search Result

Clone Name	rbasd13g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RUBR_SYNY3 (P73068) Rubredoxin (Rd)	102	1e-21
2	RUBR_ANAVT (Q9XBL8) Rubredoxin (Rd)	100	4e-21
3	RUBR_ANASP (Q9WWN1) Rubredoxin (Rd)	100	7e-21
4	RUBR_METTH (O26258) Probable rubredoxin (RD)	67	4e-11
5	HRB_MOOTA (Q9FDN6) High molecular weight rubredoxin (Nitric oxid...	65	1e-10
6	RUBR_DESGI (P00270) Rubredoxin (Rd)	64	3e-10
7	RUBL_RHILV (P28151) Probable rubredoxin hupI	64	4e-10
8	RUBR_PYRFU (P24297) Rubredoxin (Rd)	62	1e-09
9	RUBR_PYRAB (Q9V099) Rubredoxin (Rd)	62	1e-09
10	RUBR_CLOTS (P19500) Rubredoxin (Rd)	61	3e-09
11	RUBR_CHLLT (P09947) Rubredoxin (Rd)	60	5e-09
12	RUBR3_CHLTE (P58025) Rubredoxin 3 (Rd 3)	60	6e-09
13	RUBR_CLOAB (Q9AL94) Rubredoxin (Rd)	60	8e-09
14	RUBR_HELMO (P56263) Rubredoxin (Rd)	59	1e-08
15	RUBR2_CLOPE (P14072) Rubredoxin 2 (Rd 2)	59	1e-08
16	RUBR_DESVM (P15412) Rubredoxin (Rd)	59	1e-08
17	RUBR_BUTME (P14071) Rubredoxin (Rd)	59	2e-08
18	RUBR_DESVH (P00269) Rubredoxin (Rd)	58	2e-08
19	RUBR1_METJA (Q58145) Probable rubredoxin 1 (RD 1)	58	2e-08
20	RUBR_AZOVI (P30778) Rubredoxin (Rd)	58	3e-08
21	RUBR1_CHLTE (P58992) Rubredoxin 1 (Rd 1)	58	3e-08
22	RUBR4_RHOSQ (P0A4F1) Rubredoxin 4	57	5e-08
23	RUBR4_RHOER (P0A4F0) Rubredoxin 4	57	5e-08
24	RUBR_CLOPA (P00268) Rubredoxin (Rd)	56	9e-08
25	RUBR2_DESDE (Q93PP8) Rubredoxin 2 (Rd-2)	56	9e-08
26	RUBR_CLOST (P23474) Rubredoxin (Rd)	56	1e-07
27	RUBR2_CHLTE (P58993) Rubredoxin 2 (Rd 2)	56	1e-07
28	RUBR_MEGEL (P00271) Rubredoxin (Rd)	55	2e-07
29	RUBR2_METJA (Q58150) Probable rubredoxin 2 (RD 2)	55	2e-07
30	NORV_ECO57 (Q8X852) Anaerobic nitric oxide reductase flavorubred...	55	2e-07
31	NORV_SHIFL (P59405) Anaerobic nitric oxide reductase flavorubred...	55	2e-07
32	NORV_ECOL6 (P59404) Anaerobic nitric oxide reductase flavorubred...	55	2e-07
33	RUBR_ACIAD (P42453) Rubredoxin (Rd)	55	3e-07
34	RUBR2_PSEOL (P00272) Rubredoxin 2 (Two-iron rubredoxin)	54	4e-07
35	RUBR2_RHOER (Q9AE63) Rubredoxin 2	54	6e-07
36	NORV_ECOLI (Q46877) Anaerobic nitric oxide reductase flavorubred...	54	6e-07
37	RUBR3_RHOSQ (P0A4E9) Rubredoxin 3	53	7e-07
38	RUBR3_RHOER (P0A4E8) Rubredoxin 3	53	7e-07
39	RUBL_BRAJA (P48344) Probable rubredoxin hupI	53	1e-06
40	HUPJ_RHOCA (Q03009) Probable rubredoxin hupJ	52	1e-06
41	RUBR1_CLOPE (Q8XMB2) Rubredoxin 1 (Rd 1)	51	3e-06
42	NORV_SALTI (Q8Z4C5) Anaerobic nitric oxide reductase flavorubred...	51	3e-06
43	NORV_SALTY (Q8ZMJ7) Anaerobic nitric oxide reductase flavorubred...	50	6e-06
44	RUBR_RALEU (P31912) Rubredoxin (Rd)	50	8e-06
45	RUBR_AZOCH (P48343) Rubredoxin in uptake hydrogenase operon	48	3e-05
46	RUBR_TREPA (O83956) Rubredoxin (Rd)	47	5e-05
47	RUBR1_DESDE (P04170) Rubredoxin 1 (Rd-1)	45	2e-04
48	NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubred...	45	2e-04
49	RUBR1_PSEOL (P12692) Rubredoxin 1	45	3e-04
50	RUBR_PEPAS (P00267) Rubredoxin (Rd)	44	3e-04
51	CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein ...	35	0.28
52	MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4 (...	33	0.80
53	CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)	32	1.4
54	CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein ...	32	1.4
55	YHL1_EBV (P03181) Hypothetical protein BHLF1	31	3.1
56	NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1	31	3.1
57	NKX61_RAT (O35762) Homeobox protein Nkx-6.1	31	3.1
58	NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1	31	3.1
59	NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1	31	3.1
60	PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE ...	30	5.2
61	CBPA_DICDI (P35085) Calcium-binding protein	30	5.2
62	ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7...	30	5.2
63	NUCG_BOVIN (P38447) Endonuclease G, mitochondrial precursor (EC ...	30	6.8
64	VNS3_RSVT (P26658) Nonstructural protein NS3	30	6.8
65	VNS3_RSVM (Q01210) Nonstructural protein NS3	30	6.8
66	CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor	30	6.8
67	FMT_THETH (P43523) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	30	6.8
68	FMT_THET2 (Q72H32) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	30	6.8
69	MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum ...	30	6.8
70	HPRK_LEPIN (Q8F3J9) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2...	30	8.9
71	HPRK_LEPIC (Q72S40) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2...	30	8.9
72	ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2....	30	8.9
73	ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2....	30	8.9

>RUBR_SYNY3 (P73068) Rubredoxin (Rd)|
          Length = 115

 Score =  102 bits (254), Expect = 1e-21
 Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = -2

Query: 536 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 357
           E+  A L +  HECR+CGY+Y  ++GD    V PG PF  +P +W+CP CGA +++F S 
Sbjct: 7   EKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYFIST 66

Query: 356 SVEIA--GFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGY 225
               A  GFA+N  +G G N ++ G+K LLI+GSL V F FFLS Y
Sbjct: 67  GETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

to top

>RUBR_ANAVT (Q9XBL8) Rubredoxin (Rd)|
          Length = 111

 Score =  100 bits (249), Expect = 4e-21
 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 327
           ECRSCGY+Y+  KGD  + + P  PFA++P +WRCP C A ++ F +   +   +GF +N
Sbjct: 15  ECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGPAGTASGFREN 74

Query: 326 QQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 216
             +GLG N LT  QK +LI+G+L +GF FF+S Y LQ
Sbjct: 75  LGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

to top

>RUBR_ANASP (Q9WWN1) Rubredoxin (Rd)|
          Length = 111

 Score = 99.8 bits (247), Expect = 7e-21
 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 2/97 (2%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 327
           ECRSCGY+Y+  KGD  + + P  PFA++P +WRCP C A ++ F +   +   +GF +N
Sbjct: 15  ECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGPAGTASGFREN 74

Query: 326 QQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 216
             +GLG N LT  QK +LI+G+L +GF FF+S Y LQ
Sbjct: 75  LGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

to top

>RUBR_METTH (O26258) Probable rubredoxin (RD)|
          Length = 63

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 24/46 (52%), Positives = 32/46 (69%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           ++CR CGY+YD  KG+P    PPG PF  +P+ WRCP+CGA +  F
Sbjct: 14  YKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMF 59

to top

>HRB_MOOTA (Q9FDN6) High molecular weight rubredoxin (Nitric oxide reductase|
           NADH:FprA oxidoreductase)
          Length = 229

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 24/58 (41%), Positives = 36/58 (62%)
 Frame = -2

Query: 536 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           E+    L +  ++C  C Y+YD  +GDP + + PG PFA +P+DW CP CGA +  F+
Sbjct: 170 EKDKTALASPKYQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAFE 227

to top

>RUBR_DESGI (P00270) Rubredoxin (Rd)|
          Length = 52

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 24/50 (48%), Positives = 32/50 (64%)
 Frame = -2

Query: 506 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 357
           ++ C  CGY YD AKGDP   + PG  F  +PDDW CP CGA++  F+ +
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52

to top

>RUBL_RHILV (P28151) Probable rubredoxin hupI|
          Length = 70

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           EC  C ++YD A+GDP + +PPG PF+ + +DWRCP C A QS F
Sbjct: 19  ECGICWHVYDPAEGDPVWQIPPGTPFSNLTEDWRCPNCDALQSKF 63

to top

>RUBR_PYRFU (P24297) Rubredoxin (Rd)|
          Length = 53

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           C+ CGY+YD+  GDP   + PG  F ++PDDW CP CGA +S F+
Sbjct: 5   CKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFE 49

to top

>RUBR_PYRAB (Q9V099) Rubredoxin (Rd)|
          Length = 53

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           C+ CGY+YD+ +GDP   + PG  F  +PDDW CP CGA +S F+
Sbjct: 6   CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFE 50

to top

>RUBR_CLOTS (P19500) Rubredoxin (Rd)|
          Length = 52

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 22/46 (47%), Positives = 29/46 (63%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           +C  CGY+YD   GDP+  +PPG  F  +PDDW CP CG  +  F+
Sbjct: 5   QCTVCGYIYDPEVGDPTQNIPPGTKFEDLPDDWVCPDCGVGKDQFE 50

to top

>RUBR_CHLLT (P09947) Rubredoxin (Rd)|
          Length = 53

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 354
           C  CGY+YD A G+P  P+ PG  F  +P+DW CP CG  +  F+ +S
Sbjct: 6   CSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLFEPES 53

to top

>RUBR3_CHLTE (P58025) Rubredoxin 3 (Rd 3)|
          Length = 53

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 354
           C  CGY YD A GDP   + PG  F  +P+DW CP CG  +SFF+  S
Sbjct: 6   CVPCGYEYDPADGDPENGIEPGTAFEDLPEDWVCPVCGVDKSFFEPVS 53

to top

>RUBR_CLOAB (Q9AL94) Rubredoxin (Rd)|
          Length = 54

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           C  CGY+YD A+GDP   V PG  F  +PDDW CP CG  +  F+
Sbjct: 6   CVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFE 50

to top

>RUBR_HELMO (P56263) Rubredoxin (Rd)|
          Length = 52

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 22/45 (48%), Positives = 29/45 (64%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           C  CGY+YD AKGDP + + PG  F  +P DW CP CG ++  F+
Sbjct: 6   CLVCGYVYDPAKGDPDHGIAPGTAFEDLPADWVCPLCGVSKDEFE 50

to top

>RUBR2_CLOPE (P14072) Rubredoxin 2 (Rd 2)|
          Length = 53

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           C  CGY+YD A GDP   V PG  F  +PDDW CP CG  +S F
Sbjct: 6   CDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49

to top

>RUBR_DESVM (P15412) Rubredoxin (Rd)|
          Length = 52

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 25/45 (55%), Positives = 28/45 (62%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           C  CGY YD A+GDP   V PG  F  VP DW CP CGA +S F+
Sbjct: 6   CTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFE 50

to top

>RUBR_BUTME (P14071) Rubredoxin (Rd)|
          Length = 53

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 354
           C  CGY+YD A GDP   V PG  FA +P+DW CP CG ++  F  ++
Sbjct: 6   CDICGYVYDPAVGDPDNGVAPGTAFADLPEDWVCPECGVSKDEFSPEA 53

to top

>RUBR_DESVH (P00269) Rubredoxin (Rd)|
          Length = 52

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS 360
           C  CGY YD A+GDP   V PG  F  +P DW CP CGA +S F++
Sbjct: 6   CTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFEA 51

to top

>RUBR1_METJA (Q58145) Probable rubredoxin 1 (RD 1)|
          Length = 80

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 387
           ++C+ CG++YD  KGDPS  +PP  PF ++PD W CP C
Sbjct: 22  YKCKVCGWVYDPLKGDPSQNIPPKTPFEELPDTWICPVC 60

to top

>RUBR_AZOVI (P30778) Rubredoxin (Rd)|
          Length = 72

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 23/47 (48%), Positives = 29/47 (61%)
 Frame = -2

Query: 506 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           V EC+ C   YD A+GDP + +PPG PFA +P  WRCP C   +  F
Sbjct: 21  VLECKICWQRYDPAEGDPVWQIPPGTPFAALPAHWRCPRCDGDREQF 67

to top

>RUBR1_CHLTE (P58992) Rubredoxin 1 (Rd 1)|
          Length = 69

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           C  CGY+YD A+G+    + PG+PF K+PDDW CP C   ++ F
Sbjct: 19  CAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQF 62

to top

>RUBR4_RHOSQ (P0A4F1) Rubredoxin 4|
          Length = 60

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = -2

Query: 506 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +++C  CG+ YD+A G P   + PG  +  +P+DW CP CGAA+S F    VE
Sbjct: 6   LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58

to top

>RUBR4_RHOER (P0A4F0) Rubredoxin 4|
          Length = 60

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = -2

Query: 506 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +++C  CG+ YD+A G P   + PG  +  +P+DW CP CGAA+S F    VE
Sbjct: 6   LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58

to top

>RUBR_CLOPA (P00268) Rubredoxin (Rd)|
          Length = 54

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           + C  CGY+Y+   GDP   V PG  F  +PDDW CP CG  +  F+
Sbjct: 4   YTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFE 50

to top

>RUBR2_DESDE (Q93PP8) Rubredoxin 2 (Rd-2)|
          Length = 61

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 23/48 (47%), Positives = 29/48 (60%)
 Frame = -2

Query: 491 SCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +CGY+YD  +GD    VP G  F  +P+DWRCP CGA +  F   S E
Sbjct: 13  NCGYVYDPDRGDKRRKVPAGTKFEDLPEDWRCPVCGAGKKSFRRLSDE 60

to top

>RUBR_CLOST (P23474) Rubredoxin (Rd)|
          Length = 53

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 354
           C  CGY+YD   GDP   + PG  F  +P+DW CP CG  +  F+ ++
Sbjct: 6   CTVCGYVYDPEVGDPDNNINPGTSFQDIPEDWVCPLCGVGKDQFEEEA 53

to top

>RUBR2_CHLTE (P58993) Rubredoxin 2 (Rd 2)|
          Length = 52

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           +C  CGY+Y+   GDP   +P G  F  +PD W CP CGA +  F
Sbjct: 5   KCNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEF 49

to top

>RUBR_MEGEL (P00271) Rubredoxin (Rd)|
          Length = 52

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 30/46 (65%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           +EC  CGY+YD+A+GD    V  G  FA +P DW CPTCGA +  F
Sbjct: 4   YECSICGYIYDEAEGDDGN-VAAGTKFADLPADWVCPTCGADKDAF 48

to top

>RUBR2_METJA (Q58150) Probable rubredoxin 2 (RD 2)|
          Length = 55

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = -2

Query: 488 CGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           CG++YD+ KG+PS  +PPG  F  +PD +RCP CG  ++ F
Sbjct: 11  CGWVYDEDKGEPSQNIPPGTKFEDLPDTFRCPQCGLGKNAF 51

to top

>NORV_ECO57 (Q8X852) Anaerobic nitric oxide reductase flavorubredoxin homolog|
           (FlRd homolog) (FlavoRb homolog)
          Length = 411

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD AKG+P   V PG P+++VPD++ CP C   +  FD  + E
Sbjct: 359 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 409

to top

>NORV_SHIFL (P59405) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 479

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD AKG+P   V PG P+++VPD++ CP C   +  FD  + E
Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477

to top

>NORV_ECOL6 (P59404) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 479

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD AKG+P   V PG P+++VPD++ CP C   +  FD  + E
Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477

to top

>RUBR_ACIAD (P42453) Rubredoxin (Rd)|
          Length = 54

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           ++C  CG++YD+A+G P   + PG  +  +PDDW CP CG ++  F+
Sbjct: 4   YQCIVCGWIYDEAEGWPQDGIAPGTKWEDIPDDWTCPDCGVSKVDFE 50

to top

>RUBR2_PSEOL (P00272) Rubredoxin 2 (Two-iron rubredoxin)|
          Length = 172

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 375
           C +CG++YD+A GD +    PG  F  +PDDW CP CGA +
Sbjct: 123 CITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATK 163



 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 387
           ++C  C Y+YD++ G+      PG P+  +P+DW CP C
Sbjct: 3   YKCPDCNYVYDESAGNVHEGFSPGTPWHLIPEDWCCPDC 41

to top

>RUBR2_RHOER (Q9AE63) Rubredoxin 2|
          Length = 63

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 21/50 (42%), Positives = 31/50 (62%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           C  CG+ YD+A G P   + PG  + ++P+DW CP CGAA+  F+   V+
Sbjct: 13  CLQCGFEYDEAIGWPDDGIEPGTRWDEIPEDWSCPDCGAAKVDFEMVEVD 62

to top

>NORV_ECOLI (Q46877) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 479

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD AKG+P   V PG P+++VPD++ CP C   +  F+  + E
Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFEELASE 477

to top

>RUBR3_RHOSQ (P0A4E9) Rubredoxin 3|
          Length = 61

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 375
           + C  C Y+YD++KG P    P G P+  VPDDW CP CG  +
Sbjct: 4   YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46

to top

>RUBR3_RHOER (P0A4E8) Rubredoxin 3|
          Length = 61

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 375
           + C  C Y+YD++KG P    P G P+  VPDDW CP CG  +
Sbjct: 4   YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46

to top

>RUBL_BRAJA (P48344) Probable rubredoxin hupI|
          Length = 69

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           EC  C  +YD A GD    + PG PFA +P++W CP C A +S F
Sbjct: 20  ECGICWTVYDPADGDDVAQIAPGTPFAALPEEWHCPNCDAPKSKF 64

to top

>HUPJ_RHOCA (Q03009) Probable rubredoxin hupJ|
          Length = 278

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = -2

Query: 521 VLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           + +  + EC+ C   YD A GD    V PG PF  +P+DW CP C A ++ F
Sbjct: 20  ISDLAIMECKICWTPYDPASGDEFRQVLPGTPFTALPEDWHCPNCDAPKAQF 71

to top

>RUBR1_CLOPE (Q8XMB2) Rubredoxin 1 (Rd 1)|
          Length = 53

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           C  CGY+YD   GDP   V PG  F  +PD W CP C   ++ F
Sbjct: 6   CDVCGYIYDPVVGDPDNGVAPGTKFKDIPDTWVCPLCKLDKTHF 49

to top

>NORV_SALTI (Q8Z4C5) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 479

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD A G+P   V PG P++ VPD++ CP C   +  FD  + E
Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVLATE 477

to top

>NORV_SALTY (Q8ZMJ7) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 479

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 20/51 (39%), Positives = 29/51 (56%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 348
           +C  C ++YD A G+P   V PG P+  VPD++ CP C   +  FD  + E
Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWNDVPDNFLCPECSLGKDVFDVLATE 477

to top

>RUBR_RALEU (P31912) Rubredoxin (Rd)|
          Length = 78

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC-GAAQSF 369
           EC+ C + YD   GDP + + PG  F+ +P  WRCP C G A+ F
Sbjct: 27  ECKICWWEYDPEVGDPVWQIAPGTSFSALPAHWRCPNCDGEAEQF 71

to top

>RUBR_AZOCH (P48343) Rubredoxin in uptake hydrogenase operon|
          Length = 72

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -2

Query: 506 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           V EC+ C + YD A GD  + +  G PFA +P  WRCP C   +  F
Sbjct: 21  VLECKICWHRYDPAVGDEVWQILAGTPFAALPAHWRCPQCDGDREQF 67

to top

>RUBR_TREPA (O83956) Rubredoxin (Rd)|
          Length = 52

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -2

Query: 509 GVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           G + C  CG+ Y+   GD    +P G  F  +PD W CP CG  ++ F
Sbjct: 2   GTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSF 49

to top

>RUBR1_DESDE (P04170) Rubredoxin 1 (Rd-1)|
          Length = 45

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = -2

Query: 497 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           C  CGY YD A+ D        +PF ++PDDW CP CG ++  F
Sbjct: 6   CNVCGYEYDPAEHD-------NVPFDQLPDDWCCPVCGVSKDQF 42

to top

>NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)|
           (FlavoRb)
          Length = 494

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 27/96 (28%), Positives = 45/96 (46%)
 Frame = -2

Query: 653 ALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHECRSCGYLY 474
           A++ K   +  V      TP+ G ++A++ + +  P       A     V  C  C ++Y
Sbjct: 397 AVKDKSTLSTPVNAFQSATPIEG-IEAQQPLTETTPTADAAHSADCQCMV--CTVCNWVY 453

Query: 473 DQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 366
           D AKG+P+  +  G  +A VPD + CP C   +  F
Sbjct: 454 DPAKGEPNQGIEVGTTWADVPDYFLCPECHLGKDVF 489

to top

>RUBR1_PSEOL (P12692) Rubredoxin 1|
          Length = 132

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -2

Query: 503 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 387
           ++C  C Y+YD+ KG+P     P   +  +P DW CP C
Sbjct: 4   YQCPDCQYIYDENKGEPHEGFHPNTSWNDIPKDWACPDC 42

to top

>RUBR_PEPAS (P00267) Rubredoxin (Rd)|
          Length = 53

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -2

Query: 500 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 363
           EC  CGY+YD A   P  P   G  F  V ++W CP CGA +  F+
Sbjct: 5   ECTLCGYIYDPALVGPDTPDQDGA-FEDVSENWVCPLCGAGKEDFE 49

to top

>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2|
          Length = 561

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -2

Query: 671 DKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHE 498
           D+P+ T    +Q+  A   +G + TP P  L  +E    LDP   EE  AVL   VH+
Sbjct: 136 DRPISTLSGGQQQRVA---IGSVLTPHPKVLVLDEPTSALDPAAAEEVLAVLQRLVHD 190

to top

>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4|
           (Membrane-associated RING-CH protein IV) (MARCH-IV)
           (RING finger protein 174)
          Length = 410

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 21/61 (34%), Positives = 27/61 (44%)
 Frame = -2

Query: 455 PSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVEIAGFAQNQQFGLGGNSLTSGQKTL 276
           P  P PP LP + V DDW  P      S   S S +     + +     G+SL SG +T 
Sbjct: 102 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTP 161

Query: 275 L 273
           L
Sbjct: 162 L 162

to top

>CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)|
          Length = 805

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -1

Query: 495 PVLRLPVRPGQGRPVLPGAPGAAVRQGP 412
           P+LR   RPG G P+L GA   A RQ P
Sbjct: 22  PLLRRTARPGGGTPLLNGAGPGAARQSP 49

to top

>CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein cbiO 1|
          Length = 563

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 620 VGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHE 498
           V +G + TP P  L  +E    LDP   EE  AVL   VH+
Sbjct: 150 VAIGSVLTPHPDVLVLDEPTSALDPAAAEEVLAVLQRLVHD 190

to top

>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 480 PVRPGQGRPVLPGAPGAAVRQGPG 409
           P  P  GRP  PGAPG     GPG
Sbjct: 553 PSGPTGGRPAAPGAPGTPAAPGPG 576



 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 480 PVRPGQGRPVLPGAPGAAVRQGPG 409
           P  P  GRP  PGAPG     GPG
Sbjct: 428 PSGPTGGRPAAPGAPGTPAAPGPG 451



 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 480 PVRPGQGRPVLPGAPGAAVRQGPG 409
           P  P  GRP  PGAPG     GPG
Sbjct: 303 PSGPTGGRPAAPGAPGTPAAPGPG 326



 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 480 PVRPGQGRPVLPGAPGAAVRQGPG 409
           P  P  GRP  PGAPG     GPG
Sbjct: 178 PSGPTGGRPAAPGAPGTPAAPGPG 201

to top

>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1|
          Length = 364

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 369
           KP   LP  + +FWP V + PP  +      P   ++LL K
Sbjct: 192 KPLAELPGRAPIFWPGVMQSPPWRDARLACTPHQGSILLDK 232

to top

>NKX61_RAT (O35762) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 369
           KP   LP  + +FWP V + PP  +      P   ++LL K
Sbjct: 193 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 233

to top

>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 369
           KP   LP  + +FWP V + PP  +      P   ++LL K
Sbjct: 193 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 233

to top

>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1|
          Length = 367

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 247 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 369
           KP   LP  + +FWP V + PP  +      P   ++LL K
Sbjct: 192 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 232

to top

>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)|
           (Protein GYMNOS)
          Length = 1384

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = -2

Query: 578 DAEEDVPKLDPRRFEEQFAVLNTGVHE--CRSCGYLYDQAKGDP-SYP------VPPGLP 426
           D ++ VPK D R FE+  A++ T   E  C++CG   +    +  +Y       VPP L 
Sbjct: 24  DDDDFVPKKD-RTFEQVEAIVRTDAKENACQACGESTNLVSCNTCTYAFHAKCLVPP-LK 81

Query: 425 FAKVPDDWRCPTC 387
            A V ++WRCP C
Sbjct: 82  DASV-ENWRCPEC 93

to top

>CBPA_DICDI (P35085) Calcium-binding protein|
          Length = 467

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 480 PVRPGQGRPVLPGAPGAAVRQGPGRLAVPDVRRG 379
           P +PGQ  P  PGAPG    Q PG+   P  + G
Sbjct: 78  PQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPG 111

to top

>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)|
           (Unc-51-like kinase 1)
          Length = 1050

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/46 (34%), Positives = 18/46 (39%)
 Frame = +2

Query: 410 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXXAPPCSAPRTAPRTGG 547
           P P     P  PG +G P P            P  SAP  +PRT G
Sbjct: 504 PSPQVGTIPERPGWSGTPSPQGAEMRGGRSPRPGSSAPEHSPRTSG 549

to top

>NUCG_BOVIN (P38447) Endonuclease G, mitochondrial precursor (EC 3.1.30.-)|
           (Endo G)
          Length = 299

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -1

Query: 486 RLPVRPGQGRPVLPGAPGAAVRQGPGRLA 400
           RLPV P      LP  PGA    GPG LA
Sbjct: 39  RLPVLPVAAAAGLPAVPGAPAGGGPGELA 67

to top

>VNS3_RSVT (P26658) Nonstructural protein NS3|
          Length = 211

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 211 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 333
           +H K  PE  +  PT  +      F+ EV   PPS NCW C
Sbjct: 84  SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123

to top

>VNS3_RSVM (Q01210) Nonstructural protein NS3|
          Length = 211

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 211 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 333
           +H K  PE  +  PT  +      F+ EV   PPS NCW C
Sbjct: 84  SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123

to top

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 471 PG-QGRPVLPGAPGAAVRQGPGRLAVPDVR 385
           PG QG P LPG PGAAV   PG    P  R
Sbjct: 376 PGIQGPPGLPGPPGAAVMGPPGPPGFPGER 405

to top

>FMT_THETH (P43523) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 305

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -1

Query: 513 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 397
           H G RV  LRL   PG+G       PG   R GP  +AV
Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265

to top

>FMT_THET2 (Q72H32) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 305

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -1

Query: 513 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 397
           H G RV  LRL   PG+G       PG   R GP  +AV
Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265

to top

>MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum response|
           factor-like protein 2) (XMEF2) (RSRFR2)
          Length = 365

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +2

Query: 410 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXXAPPCSAPRTAPRTG 544
           PGPW++     P   G PWP             P  +P TA   G
Sbjct: 307 PGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGTARARG 351

to top

>HPRK_LEPIN (Q8F3J9) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 321

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -1

Query: 507 GARVPVLRLPVRPGQGRPVL 448
           G ++P++R+PVRPG+  P++
Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279

to top

>HPRK_LEPIC (Q72S40) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 321

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -1

Query: 507 GARVPVLRLPVRPGQGRPVL 448
           G ++P++R+PVRPG+  P++
Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279

to top

>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 765

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 674 DDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDP 546
           D+KPLD       +  AG    DL TP PG  ++   V +  P
Sbjct: 307 DEKPLDLGPPLPPKIEAGTFSSDLQTPRPGSAESALSVQRTSP 349

to top

>ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8) (Zinc
           finger protein 378)
          Length = 765

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 674 DDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDP 546
           D+KPLD       +  AG    DL TP PG  ++   V +  P
Sbjct: 307 DEKPLDLGPPLPPKIEAGTFSSDLQTPRPGSAESALSVQRTSP 349


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,518,303
Number of Sequences: 219361
Number of extensions: 1701173
Number of successful extensions: 8097
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 6011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7944
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result