>SYS_THETN (Q8RDJ5) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 425

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -1

Query: 489 KRNGEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQVPNI 316
           KRN E+D +  LKRE  +  E+I     L    K+ + EL   + E  E++   +PNI
Sbjct: 50  KRNTESDNIARLKREGKDASELIAKMKELSDKIKDMEQEL-REIEEEMEKILWTIPNI 106

>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 20  PAERKRGARPADRKKPIQHSSKFSFLSYLSPSNWGKKPKPFFFDTEQP 163
           PAER++G R   ++KP   S K  F     PS   KKP P+   T  P
Sbjct: 571 PAERRKGERGEKQRKPGGSSWKTFFALGRGPSVPRKKPLPWLGGTRAP 618

>SMC4_XENLA (P50532) Structural maintenance of chromosome 4|
           (Chromosome-associated protein C) (Chromosome assembly
           protein XCAP-C)
          Length = 1290

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = -1

Query: 471 DRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQVPN 319
           + V  L++   E+K   E     LQS  EQ+V L ++++EL+  ++A  P+
Sbjct: 796 EEVAKLRQATREMKNTFEKYTASLQSLSEQEVHLKAQVKELEVNVAAAAPD 846

>CV106_HUMAN (Q6P0N0) Protein C14orf106 (P243)|
          Length = 1132

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
 Frame = -1

Query: 498  GVEKRNGEADRVEMLK--REVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERL---- 337
            G   + G+AD+ + +K   +VG LK   + ++FL Q  K+   +  S      +R+    
Sbjct: 945  GQNGKRGDADQKQTIKITAKVGTLKRKQQMREFLEQLPKDDHDDFFSTTPLQHQRILLPS 1004

Query: 336  ---SAQVPNIL*DLLNNPSTRRRRMYLVLSRDSQENISSHMLGSLQNVYIDSLSF 181
               S    +IL ++  NP+T    ++ ++     +++S  MLGS+     D   F
Sbjct: 1005 FQDSEDDDDILPNMDKNPTTPSSVIFPLVKTPQCQHVSPGMLGSINRNDCDKYVF 1059

>GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)|
          Length = 2238

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -1

Query: 462  EMLKREVGELKEVIEGKDFL---LQSYKEQKVELCSRMRELQERLSAQVPNIL*DL 304
            E L +EV  LKE + G+D     LQ   EQK  +   + E + +L +QV  +  DL
Sbjct: 1103 EELTKEVARLKEAVSGQDVALAGLQGQLEQKSAVIVSLSERESQLQSQVEKLEADL 1158

>UL06_HHV2H (P89429) Virion protein UL6|
          Length = 678

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -3

Query: 397 ELQGAEGGALLKDERAAREALGASAQHLVGSTQQPLYKAQADVLGVVKGFTGKYFVAHA 221
           EL+ A+ GAL +++RAA  A G  A       +  L +A  D++ V K      +VA++
Sbjct: 453 ELRRAQAGALEREQRAADRAAGGGAGR---PAEADLLRADYDIIDVSKSMDDDTYVANS 508

>GBP2_RAT (Q63663) Interferon-induced guanylate-binding protein 2|
           (GTP-binding protein 2) (Guanine nucleotide-binding
           protein 2) (p67)
          Length = 589

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = -1

Query: 495 VEKRNGEADRVEMLKREVGELKEVIEGKDFLLQ----SYKEQKVELCSRMRELQERLSAQ 328
           +E    +A+  E   RE+ E +E  E    ++Q    SY+E   +L  +M+E Q++L  +
Sbjct: 487 IEVERIKAETAEAANRELAEKQEKFE---LMMQQKEESYQEHVRQLTEKMKEEQKKLIEE 543

Query: 327 VPNIL*DLLNNPSTRRRRMYLVLSRDSQENISSHMLGSLQNV 202
             NI+         R +  +L   R+  EN S  +L  ++N+
Sbjct: 544 QDNII-----ALKLREQEKFL---REGYENESKKLLREIENM 577

>SYS_RHILO (Q98LC8) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 434

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = -1

Query: 501 IGVEKRNGEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLS---A 331
           IG   R+G+A   E LK EVG++K  I+  +              +R REL + L+   A
Sbjct: 63  IGNAMRSGDAALAEKLKAEVGDIKTFIQNGE--------------ARERELDKALTDALA 108

Query: 330 QVPNIL*DLLNNPSTRRRRMYLVLSRDSQENISSHMLGSL 211
            +PN+  D             + + +D  +N+  H++G +
Sbjct: 109 VLPNVPLD------------DVPVGKDEHDNVVKHIVGKV 136

>CVP5_PIMHY (Q8T0W1) Cysteine-rich venom protein 5 precursor|
          Length = 115

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   RTHRPKPAERKRGARPADRKKP 67
           RT RPKP  R R  +P  R+KP
Sbjct: 87  RTRRPKPTNRSRRPKPTHRRKP 108

>K1C15_SHEEP (O77727) Keratin, type I cytoskeletal 15 (Cytokeratin-15) (CK-15)|
           (Keratin-15) (K15)
          Length = 453

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 471 DRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQVPNI 316
           + ++  K E+ +L+  I+G +  LQS    K  L S + E   R +AQ+  I
Sbjct: 311 EMIQTSKSEITDLRRTIQGLEIELQSQLSMKAGLESTLAETDGRYAAQLQQI 362

>MYH3_HUMAN (P11055) Myosin heavy chain, fast skeletal muscle, embryonic (Muscle|
            embryonic myosin heavy chain) (SMHCE)
          Length = 1940

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = -1

Query: 513  ELHCIGVEKRNGEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLS 334
            E H   ++    E D+V  L +   +L++ +E  +  L+  K+ +V+L    R+L+  L 
Sbjct: 1002 EAHQQALDDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLEGDLK 1061

Query: 333  AQVPNIL*DLLNNPSTRRRRM 271
                +IL DL N+      R+
Sbjct: 1062 LAQESIL-DLENDKQQLDERL 1081

>EPB42_HUMAN (P16452) Erythrocyte membrane protein band 4.2 (Erythrocyte protein|
           4.2) (P4.2)
          Length = 690

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -3

Query: 409 LPTPELQGAEGGALLKDERAAREALGASAQHLVGSTQQPLYKAQADVLGVV 257
           LPTP+ Q  + GALL   R +   L    Q L G   +P+Y  QA VL  V
Sbjct: 227 LPTPQTQATQEGALLNKRRGSVPIL---RQWLTG-RGRPVYDGQAWVLAAV 273

>KLP3_SCHPO (Q9US60) Kinesin-like protein 3 (Kinesin-related protein 1)|
          Length = 554

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
 Frame = -1

Query: 534 DSSIDDPELHCIGVEKRNGEADRVEMLKREVG-ELKEVIEGKDFLLQSYKEQKVELCSRM 358
           +S+ D  E     + + N ++D +  L  E   ELK+    +D +L S K+Q  +L + +
Sbjct: 405 ESNNDRDESTVASIHRHNFDSDSINRLYAEAQLELKQ----RDGVLSSTKQQLSDLMTAL 460

Query: 357 RELQERLSAQVPN--IL*DLLNNPSTRRRRMYLVLSRDSQENISSHMLGSLQNV 202
            + QER    V N  +  +L  N S   +  + +  +D   +I++     LQ +
Sbjct: 461 GDAQERYVELVKNHRVNSNLTANNSLNDKPGFTIEQKDKNFSINNERNNFLQKL 514

>K1C13_PROAT (Q5K2P4) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)|
           (Keratin-13) (K13)
          Length = 465

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -1

Query: 471 DRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQVPNI 316
           + ++  K E+ ELK  I+G    LQS    K  L  ++ + + R S+ + N+
Sbjct: 308 EAIQTTKTEINELKRTIQGLQIELQSQLSMKDALEGQLADTEHRYSSILMNL 359

>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = -1

Query: 468 RVEMLKREVGE---LKEVIEGKDFLLQSYKEQKVELCSRMRELQER 340
           +VE L+R++ E    ++ +E     L+   E+K E CSR++EL ER
Sbjct: 361 KVEELQRKLDEEVKKRQKLEPSQVGLERQLEEKTEECSRLQELLER 406

>GCSP1_PSEF5 (Q4K7Q8) Glycine dehydrogenase [decarboxylating] 1 (EC 1.4.4.2)|
            (Glycine decarboxylase 1) (Glycine cleavage system
            P-protein 1)
          Length = 951

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = -3

Query: 397  ELQGAEGGALLKDERAAREALGASAQHLVGSTQQPLYKAQADVLGVVKGFTGKYFVAHAR 218
            E++  E GAL KD+   + A   +A+ LVG    P  + QA V  V     GKY+    R
Sbjct: 871  EIRAVENGALDKDDNPLKNAPHTAAE-LVGEWSHPYSREQA-VYPVASLVEGKYWPPVGR 928

Query: 217  V 215
            V
Sbjct: 929  V 929

>K1C10_BOVIN (P06394) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)|
           (Keratin-10) (K10) (Cytokeratin-6B) (Cytokeratin VIB)
          Length = 526

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -1

Query: 483 NGEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQVPNI 316
           N   ++V   K E+ EL+  I+G +  LQS    K  L + + E + R   Q+  I
Sbjct: 333 NSNLEQVSSHKSEITELRRTIQGLEIELQSQLALKQSLEASLAETEGRYCVQLSQI 388

>KLP68_DROME (P46867) Kinesin-like protein KLP68D|
          Length = 784

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = -1

Query: 477 EADRVE--MLKREVGELK-EVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQV 325
           E +RVE   L  ++ EL+ +++ G   LL +Y E+++EL  ++ E+ ER   ++
Sbjct: 446 ERERVENSKLAAKLAELEGQLVRGGKNLLDTYSERQIELEKKLVEIAERKKREI 499

>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin|
            B1 chain)
          Length = 1168

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = -1

Query: 480  GEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKVELCSRMRELQER 340
            G    + +++  VGE+++V+   + L++  KEQ     +RM+EL+ +
Sbjct: 999  GTGRSLRLIQERVGEVQQVLVPAERLVKGMKEQMSGFWARMKELRRQ 1045

>TXND9_CAEEL (Q11183) Thioredoxin domain-containing protein 9 homolog|
          Length = 208

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 492 EKRNGEADRVEMLKREVGELKEVIEGKDFLLQSYKEQKV 376
           + +  + DR+EML    G+ +EV + K+F   + K  KV
Sbjct: 49  QMKKAQKDRIEMLSHGHGKYEEVADEKEFFEATKKSDKV 87

>GYRB_HAEIN (P43701) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 806

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +2

Query: 89  SFLSYLSPSNWGKKPKPFFFDTEQP----RTKTQWNDNESM*TFC 211
           +F+ YL+ +     PKPF+F  E+         QWND  +   +C
Sbjct: 227 AFVEYLNKNKNPIHPKPFYFTAEKDGIGVEVALQWNDGVNENVYC 271

>VATD_HALSA (Q9HNE7) V-type ATP synthase subunit D (EC 3.6.3.14) (V-type ATPase|
           subunit D)
          Length = 224

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
 Frame = -1

Query: 465 VEMLKREVGELK-----EVIEGKDFLLQSYKEQKVELCSRMRELQERLSAQ 328
           +E  KR V  L+     E+ EGK+++ Q  +E++ E   RM++++++  AQ
Sbjct: 159 IETTKRRVNALEFKLLPELHEGKEYIDQKLEEKEREEMFRMKKVKDKKEAQ 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,148,815
Number of Sequences: 219361
Number of extensions: 1362530
Number of successful extensions: 5455
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5454
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)